AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012781.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012781.01.T02 MTR_3g030890 98.895 362 4 0 8 369 11 372 0.0 739
MsG0380012781.01.T02 MTR_4g037515 81.006 358 68 0 8 365 69 426 0.0 607
MsG0380012781.01.T01 MTR_3g030890 98.895 362 4 0 8 369 11 372 0.0 739
MsG0380012781.01.T01 MTR_4g037515 81.006 358 68 0 8 365 69 426 0.0 607
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012781.01.T02 AT5G47970 74.105 363 93 1 8 369 12 374 0.0 572
MsG0380012781.01.T02 AT5G47970 74.105 363 93 1 8 369 12 374 0.0 572
MsG0380012781.01.T02 AT3G63510 74.790 357 88 2 8 362 54 410 0.0 568
MsG0380012781.01.T02 AT3G63510 73.851 348 89 2 17 362 30 377 0.0 545
MsG0380012781.01.T02 AT5G47970 80.385 260 51 0 8 267 12 271 5.09e-161 452
MsG0380012781.01.T01 AT5G47970 74.105 363 93 1 8 369 12 374 0.0 572
MsG0380012781.01.T01 AT5G47970 74.105 363 93 1 8 369 12 374 0.0 572
MsG0380012781.01.T01 AT3G63510 74.790 357 88 2 8 362 54 410 0.0 568
MsG0380012781.01.T01 AT3G63510 73.851 348 89 2 17 362 30 377 0.0 545
MsG0380012781.01.T01 AT5G47970 80.385 260 51 0 8 267 12 271 5.09e-161 452

Find 0 sgRNAs with CRISPR-Local

Find 627 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAAAAATAAT+GGG - Chr3:24452360-24452379 MsG0380012781.01.T02:intron 0.0%
!! TTAAAAAAAAAAAAAAATAA+TGG - Chr3:24452359-24452378 MsG0380012781.01.T02:intron 0.0%
!!! TTTTTTTTTTTTTTAAAAAA+AGG + Chr3:24452355-24452374 None:intergenic 0.0%
!! ATTTAAAGAAAAATATTCAT+TGG - Chr3:24450422-24450441 MsG0380012781.01.T02:intron 10.0%
!! CTATAAAAATCAAAATTTAT+TGG + Chr3:24445758-24445777 None:intergenic 10.0%
!! GTTTATAATGATAATAAATT+AGG - Chr3:24444175-24444194 MsG0380012781.01.T02:intron 10.0%
!! TAGAAATAATAATGTAAATA+GGG + Chr3:24451500-24451519 None:intergenic 10.0%
!! TATATTGAAAAATAAATAAC+TGG + Chr3:24444668-24444687 None:intergenic 10.0%
!! TTAGAAATAATAATGTAAAT+AGG + Chr3:24451501-24451520 None:intergenic 10.0%
!!! AGTTAAATTTTTTTTGAATT+TGG - Chr3:24445025-24445044 MsG0380012781.01.T02:intron 10.0%
!!! ATAAAATTGAACTTTTTATT+TGG - Chr3:24447324-24447343 MsG0380012781.01.T02:CDS 10.0%
!!! ATATTATGAACAAATTTTAA+AGG - Chr3:24448326-24448345 MsG0380012781.01.T02:intron 10.0%
!!! ATTAAACTAATGATATTTTA+AGG - Chr3:24448616-24448635 MsG0380012781.01.T02:intron 10.0%
!!! TATTATGAACAAATTTTAAA+GGG - Chr3:24448327-24448346 MsG0380012781.01.T02:intron 10.0%
!!! TGACTTATTTATTTATTTTT+TGG + Chr3:24447174-24447193 None:intergenic 10.0%
!!! TTATTTAATCTTTAATTTGA+AGG - Chr3:24448558-24448577 MsG0380012781.01.T02:intron 10.0%
!!! TTTTTTTTTTAATCAAAGAT+CGG + Chr3:24450534-24450553 None:intergenic 10.0%
!! AAAAATAGAGAGAAAAAATT+GGG + Chr3:24451866-24451885 None:intergenic 15.0%
!! AAGAAATAACATATAAAGTA+AGG - Chr3:24446038-24446057 MsG0380012781.01.T02:intron 15.0%
!! ATAACATTAACACTTAATAA+TGG - Chr3:24451298-24451317 MsG0380012781.01.T02:intron 15.0%
!! ATAATGATAATAAATTAGGA+AGG - Chr3:24444179-24444198 MsG0380012781.01.T02:intron 15.0%
!! ATTGAAAACAGATAATTTAT+AGG + Chr3:24448431-24448450 None:intergenic 15.0%
!! ATTTATAAGAACACAAAATA+GGG + Chr3:24445451-24445470 None:intergenic 15.0%
!! CAATTACAACTAATAAATAT+AGG - Chr3:24449189-24449208 MsG0380012781.01.T02:intron 15.0%
!! TAAGAAACAAAAATAATCAA+TGG + Chr3:24444446-24444465 None:intergenic 15.0%
!! TGACATTTCAATAATTAAAA+TGG + Chr3:24444619-24444638 None:intergenic 15.0%
!! TGTTAATGTTATAATTCATT+GGG + Chr3:24451290-24451309 None:intergenic 15.0%
!! TTGAAAACAGATAATTTATA+GGG + Chr3:24448430-24448449 None:intergenic 15.0%
!! TTGTATATTATTATGAAATG+TGG + Chr3:24451459-24451478 None:intergenic 15.0%
!!! AAAAATCTAGAAAATGTTTT+AGG + Chr3:24448272-24448291 None:intergenic 15.0%
!!! ACAAAACTAATGATATTTTA+GGG + Chr3:24448531-24448550 None:intergenic 15.0%
!!! ACTTATTTGTTGAATATAAA+GGG + Chr3:24447142-24447161 None:intergenic 15.0%
!!! GAATTTTTGTAAAATAGTTA+GGG - Chr3:24448694-24448713 MsG0380012781.01.T02:intron 15.0%
!!! GTATTTGTTGTTATTATATA+AGG - Chr3:24447635-24447654 MsG0380012781.01.T02:intron 15.0%
!!! TAAAATTTTCCTTCAATTTT+TGG + Chr3:24448751-24448770 None:intergenic 15.0%
!!! TAATATCCCTTTAAAATTTT+GGG + Chr3:24450265-24450284 None:intergenic 15.0%
!!! TCAGAATATCTATTTTAAAT+TGG - Chr3:24448214-24448233 MsG0380012781.01.T02:intron 15.0%
!!! TCATACTTTTAACAAAAAAT+AGG + Chr3:24451620-24451639 None:intergenic 15.0%
!!! TGAATTTTTGTAAAATAGTT+AGG - Chr3:24448693-24448712 MsG0380012781.01.T02:intron 15.0%
!! AAAAAAATTGTAGAATGTGA+TGG - Chr3:24447875-24447894 MsG0380012781.01.T02:intron 20.0%
!! AAAAAATTGTAGAATGTGAT+GGG - Chr3:24447876-24447895 MsG0380012781.01.T02:intron 20.0%
!! AAATAATTTACACAAGACAA+CGG + Chr3:24447013-24447032 None:intergenic 20.0%
!! AACAATGAAAACATTATTAG+AGG + Chr3:24449460-24449479 None:intergenic 20.0%
!! AACCATATTCAGTAAATATA+AGG + Chr3:24446957-24446976 None:intergenic 20.0%
!! ACCATATTCAGTAAATATAA+GGG + Chr3:24446956-24446975 None:intergenic 20.0%
!! ACTGTAGTATAACATAATAT+AGG - Chr3:24445184-24445203 MsG0380012781.01.T02:intron 20.0%
!! AGCTAAAGATTAAAAAACAA+AGG - Chr3:24447916-24447935 MsG0380012781.01.T02:intron 20.0%
!! AGTTAGAAAATTCTAAGTAA+TGG + Chr3:24449699-24449718 None:intergenic 20.0%
!! ATTATGAAATGTGGTAATTA+GGG + Chr3:24451450-24451469 None:intergenic 20.0%
!! ATTGAATATCATTGGTATAA+AGG - Chr3:24451230-24451249 MsG0380012781.01.T02:CDS 20.0%
!! CATATTTAATCCAATTAAAC+TGG - Chr3:24448815-24448834 MsG0380012781.01.T02:intron 20.0%
!! CATTATTATTTGTTTAATCC+AGG - Chr3:24449726-24449745 MsG0380012781.01.T02:intron 20.0%
!! CTGTAGTATAACATAATATA+GGG - Chr3:24445185-24445204 MsG0380012781.01.T02:intron 20.0%
!! GAAAAATAGAGAGAAAAAAT+TGG + Chr3:24451867-24451886 None:intergenic 20.0%
!! GAAACAATTGTTTATCAAAA+GGG - Chr3:24444141-24444160 MsG0380012781.01.T02:CDS 20.0%
!! GATTTATAAGAACACAAAAT+AGG + Chr3:24445452-24445471 None:intergenic 20.0%
!! GTGATTTATTTAAGAAAGAT+GGG - Chr3:24447983-24448002 MsG0380012781.01.T02:intron 20.0%
!! GTGTTAATGTTATAATTCAT+TGG + Chr3:24451291-24451310 None:intergenic 20.0%
!! GTTATTGAACATTCTTAATT+CGG - Chr3:24449477-24449496 MsG0380012781.01.T02:intron 20.0%
!! TATTATGAAATGTGGTAATT+AGG + Chr3:24451451-24451470 None:intergenic 20.0%
!! TGAAACAATTGTTTATCAAA+AGG - Chr3:24444140-24444159 MsG0380012781.01.T02:CDS 20.0%
!! TGAAAGTCAGTATATTTATA+GGG + Chr3:24448370-24448389 None:intergenic 20.0%
!! TGTAATCAAATAAAGTTGTT+TGG + Chr3:24448494-24448513 None:intergenic 20.0%
!! TGTGATTTATTTAAGAAAGA+TGG - Chr3:24447982-24448001 MsG0380012781.01.T02:intron 20.0%
!! TTCAATCAAACTAAAATGTA+AGG + Chr3:24448873-24448892 None:intergenic 20.0%
!!! AAAAAAAAAAATAATGGGGA+AGG - Chr3:24452365-24452384 MsG0380012781.01.T02:intron 20.0%
!!! AAAAAAAAAATAATGGGGAA+GGG - Chr3:24452366-24452385 MsG0380012781.01.T02:intron 20.0%
!!! AAATCAAAGCAAATTTTTAG+AGG + Chr3:24448402-24448421 None:intergenic 20.0%
!!! AAATTGAAGGAAAATTTTAG+AGG - Chr3:24448752-24448771 MsG0380012781.01.T02:intron 20.0%
!!! AAGTTTTATTTATGTTGCTT+TGG - Chr3:24446568-24446587 MsG0380012781.01.T02:intron 20.0%
!!! AATCAAAGCAAATTTTTAGA+GGG + Chr3:24448401-24448420 None:intergenic 20.0%
!!! AATTGAAGGAAAATTTTAGA+GGG - Chr3:24448753-24448772 MsG0380012781.01.T02:intron 20.0%
!!! AATTTAAGGTTTCAGAAATT+AGG + Chr3:24449409-24449428 None:intergenic 20.0%
!!! AGTTCAATTTTATCATATGT+TGG + Chr3:24447317-24447336 None:intergenic 20.0%
!!! ATTCACATTTTAATGTGATA+AGG + Chr3:24450448-24450467 None:intergenic 20.0%
!!! CACAAAACTAATGATATTTT+AGG + Chr3:24448532-24448551 None:intergenic 20.0%
!!! CATTATTATTTCTAATAGCA+CGG - Chr3:24451506-24451525 MsG0380012781.01.T02:intron 20.0%
!!! CTAATATCCCTTTAAAATTT+TGG + Chr3:24450266-24450285 None:intergenic 20.0%
!!! CTTTTAACAAAAAATAGGAA+AGG + Chr3:24451615-24451634 None:intergenic 20.0%
!!! GACTTATTTGTTGAATATAA+AGG + Chr3:24447143-24447162 None:intergenic 20.0%
!!! GTAATTCTCTTTTTTCATTT+TGG - Chr3:24446512-24446531 MsG0380012781.01.T02:intron 20.0%
!!! GTTAAAAGTATGAATATTAC+TGG - Chr3:24451627-24451646 MsG0380012781.01.T02:intron 20.0%
!!! GTTCAATTTTATCATATGTT+GGG + Chr3:24447316-24447335 None:intergenic 20.0%
!!! TAACACTTAATAATGGATTA+GGG - Chr3:24451305-24451324 MsG0380012781.01.T02:intron 20.0%
!!! TATTTTTTCGTCAGTATTAT+GGG - Chr3:24452694-24452713 MsG0380012781.01.T02:intron 20.0%
!!! TGAAAGTTGATATATTTAGA+GGG - Chr3:24448784-24448803 MsG0380012781.01.T02:intron 20.0%
!!! TGCATATTTGAATTTTCTTT+GGG - Chr3:24449262-24449281 MsG0380012781.01.T02:intron 20.0%
!!! TGTTCTTATAAATCTTCTTT+TGG - Chr3:24445458-24445477 MsG0380012781.01.T02:intron 20.0%
!!! TTAACACTTAATAATGGATT+AGG - Chr3:24451304-24451323 MsG0380012781.01.T02:intron 20.0%
!!! TTATCTTTTATTGTAGTTTG+TGG - Chr3:24449222-24449241 MsG0380012781.01.T02:intron 20.0%
!!! TTATTATTAAGTACCCATTT+TGG - Chr3:24447100-24447119 MsG0380012781.01.T02:intron 20.0%
!!! TTCTGAAACCTTAAATTATT+AGG - Chr3:24449412-24449431 MsG0380012781.01.T02:intron 20.0%
!!! TTGAAAGTTGATATATTTAG+AGG - Chr3:24448783-24448802 MsG0380012781.01.T02:intron 20.0%
!!! TTGCATATTTGAATTTTCTT+TGG - Chr3:24449261-24449280 MsG0380012781.01.T02:intron 20.0%
!!! TTGTTAATTTTTGCTCAAAA+TGG - Chr3:24445161-24445180 MsG0380012781.01.T02:intron 20.0%
!!! TTTCCTTTTTTTTTTTTGAC+CGG - Chr3:24448289-24448308 MsG0380012781.01.T02:intron 20.0%
!!! TTTTCAATATATTACAGTTG+TGG - Chr3:24444677-24444696 MsG0380012781.01.T02:intron 20.0%
! AAACATTTAGGAAAAGTTCA+AGG + Chr3:24451143-24451162 None:intergenic 25.0%
! AACACAAAATAGGGAATAAA+CGG + Chr3:24445442-24445461 None:intergenic 25.0%
! AACTTTCCAATCAAATGAAA+AGG + Chr3:24446629-24446648 None:intergenic 25.0%
! AAGAAATAAATTGTTGTGTC+TGG - Chr3:24452120-24452139 MsG0380012781.01.T02:intron 25.0%
! AAGAAGAATAAGAGTGAAAA+TGG - Chr3:24444380-24444399 MsG0380012781.01.T02:intron 25.0%
! AAGTATTCATATCTGCATTA+AGG + Chr3:24445820-24445839 None:intergenic 25.0%
! AATAATTTACACAAGACAAC+GGG + Chr3:24447012-24447031 None:intergenic 25.0%
! AATATAGAAAATATTCCAGC+CGG + Chr3:24448311-24448330 None:intergenic 25.0%
! AATCTGCATTTCAATAATAG+GGG - Chr3:24447806-24447825 MsG0380012781.01.T02:intron 25.0%
! ACCAATTAAGACATCTAATA+AGG - Chr3:24452000-24452019 MsG0380012781.01.T02:intron 25.0%
! ACTTTCCAATCAAATGAAAA+GGG + Chr3:24446628-24446647 None:intergenic 25.0%
! AGAAAAACCTAACAACAATA+CGG + Chr3:24452734-24452753 None:intergenic 25.0%
! AGATTCAACAGAAAATAACA+TGG - Chr3:24450164-24450183 MsG0380012781.01.T02:intron 25.0%
! ATAAAAAGGTCAAGTTATGT+AGG - Chr3:24451114-24451133 MsG0380012781.01.T02:intron 25.0%
! ATAAAACCAGCAACATAAAA+AGG - Chr3:24451100-24451119 MsG0380012781.01.T02:intron 25.0%
! ATAAAATTGTTTCCCAATTC+TGG - Chr3:24448178-24448197 MsG0380012781.01.T02:intron 25.0%
! ATAGAAATAGATGTTCTTGT+TGG + Chr3:24449972-24449991 None:intergenic 25.0%
! ATAGGAAAGGAAAATAAAAG+TGG + Chr3:24451602-24451621 None:intergenic 25.0%
! ATCATGATCTAAACTTTGTT+TGG - Chr3:24449078-24449097 MsG0380012781.01.T02:intron 25.0%
! ATGATATTCAATGCCTATAT+AGG + Chr3:24451222-24451241 None:intergenic 25.0%
! ATTAAAACCCGAAAATTTAG+AGG - Chr3:24448723-24448742 MsG0380012781.01.T02:intron 25.0%
! ATTTATTCATAAGCAAACTC+TGG - Chr3:24445967-24445986 MsG0380012781.01.T02:intron 25.0%
! CTGAAAACATATCAAGAAAT+AGG - Chr3:24449152-24449171 MsG0380012781.01.T02:intron 25.0%
! CTGAAAGTCAGTATATTTAT+AGG + Chr3:24448371-24448390 None:intergenic 25.0%
! CTGCATGTAATATTTAACTA+TGG + Chr3:24444780-24444799 None:intergenic 25.0%
! GAATCTGCATTTCAATAATA+GGG - Chr3:24447805-24447824 MsG0380012781.01.T02:intron 25.0%
! GACTTAACATTTACAATCAA+TGG - Chr3:24445865-24445884 MsG0380012781.01.T02:intron 25.0%
! GACTTCAACCTAATAATTTA+AGG + Chr3:24449423-24449442 None:intergenic 25.0%
! GCAATCAAATGTATATTCTT+TGG + Chr3:24450063-24450082 None:intergenic 25.0%
! GCATACTATTTCAATTTGAA+TGG - Chr3:24449640-24449659 MsG0380012781.01.T02:intron 25.0%
! GGAAAACTCTAATTTATACA+AGG - Chr3:24444842-24444861 MsG0380012781.01.T02:intron 25.0%
! GGTCTTAAATATAAGCAAAA+AGG - Chr3:24450001-24450020 MsG0380012781.01.T02:intron 25.0%
! GGTTTATATAAACTGATACT+TGG - Chr3:24449498-24449517 MsG0380012781.01.T02:intron 25.0%
! TAACTAAATAACCAGAAGTA+AGG - Chr3:24450229-24450248 MsG0380012781.01.T02:intron 25.0%
! TAATGTAAATAGGGTAACTA+TGG + Chr3:24451491-24451510 None:intergenic 25.0%
! TAGAAATAGATGTTCTTGTT+GGG + Chr3:24449971-24449990 None:intergenic 25.0%
! TAGCAGAAAATGAATATCAT+TGG + Chr3:24451725-24451744 None:intergenic 25.0%
! TAGGAAAGGAAAATAAAAGT+GGG + Chr3:24451601-24451620 None:intergenic 25.0%
! TATGATGTAATCTAGTAACT+TGG - Chr3:24452091-24452110 MsG0380012781.01.T02:intron 25.0%
! TCATTGGCATCTTAATTAAA+TGG + Chr3:24451709-24451728 None:intergenic 25.0%
! TCCTTATTAGATGTCTTAAT+TGG + Chr3:24452004-24452023 None:intergenic 25.0%
! TCGATCATGTAAAAACATTT+AGG + Chr3:24451155-24451174 None:intergenic 25.0%
! TGATATTCAATGCCTATATA+GGG + Chr3:24451221-24451240 None:intergenic 25.0%
! TTAAAACCCGAAAATTTAGA+GGG - Chr3:24448724-24448743 MsG0380012781.01.T02:intron 25.0%
! TTAACATTTACAATCAATGG+TGG - Chr3:24445868-24445887 MsG0380012781.01.T02:intron 25.0%
! TTATATAGTGTGTCAAGTAA+GGG - Chr3:24445264-24445283 MsG0380012781.01.T02:intron 25.0%
! TTCATAACTAATTTACTCCT+GGG - Chr3:24446809-24446828 MsG0380012781.01.T02:intron 25.0%
! TTCATACAATGAACTATGTA+AGG - Chr3:24444955-24444974 MsG0380012781.01.T02:intron 25.0%
! TTGATTGTAAATGTTAAGTC+AGG + Chr3:24445865-24445884 None:intergenic 25.0%
! TTTATATAGTGTGTCAAGTA+AGG - Chr3:24445263-24445282 MsG0380012781.01.T02:intron 25.0%
! TTTCATAATTCACTCAAGAA+AGG - Chr3:24445673-24445692 MsG0380012781.01.T02:intron 25.0%
! TTTGTATGTTCAAACTTTGT+TGG - Chr3:24446442-24446461 MsG0380012781.01.T02:intron 25.0%
!! AAAGTTTTTCATCTTCTGAT+GGG - Chr3:24446643-24446662 MsG0380012781.01.T02:intron 25.0%
!! AAATTTGAGTTAAAAGACCA+GGG - Chr3:24444246-24444265 MsG0380012781.01.T02:intron 25.0%
!! AAGCATTTGTTACTTACTTA+TGG + Chr3:24447774-24447793 None:intergenic 25.0%
!! ATGAACTTTTGTAAAAAAGC+AGG + Chr3:24448461-24448480 None:intergenic 25.0%
!! ATTTGTTACTTACTTATGGT+AGG + Chr3:24447770-24447789 None:intergenic 25.0%
!! ATTTTCATTCATGGATAGTA+AGG - Chr3:24451891-24451910 MsG0380012781.01.T02:intron 25.0%
!! CAAATAGTGTTGTTAAGAAA+AGG + Chr3:24444981-24445000 None:intergenic 25.0%
!! CAGTTTTCTCTTAAAAGTAA+AGG + Chr3:24448996-24449015 None:intergenic 25.0%
!! CATCTTCCCAAAATTTTAAA+GGG - Chr3:24450256-24450275 MsG0380012781.01.T02:intron 25.0%
!! GTGGTAAATGACATTATTTT+TGG - Chr3:24452209-24452228 MsG0380012781.01.T02:CDS 25.0%
!! GTTTTCATCTTTCTCAAATA+TGG + Chr3:24451355-24451374 None:intergenic 25.0%
!! TATTGACTAATTAGTTGTTG+TGG - Chr3:24449356-24449375 MsG0380012781.01.T02:CDS 25.0%
!! TGCAGATATGAATACTTTTA+TGG - Chr3:24445823-24445842 MsG0380012781.01.T02:intron 25.0%
!! TTATCACCTTATGAGATTTT+GGG + Chr3:24451048-24451067 None:intergenic 25.0%
!! TTTATCACCTTATGAGATTT+TGG + Chr3:24451049-24451068 None:intergenic 25.0%
!! TTTGACGTGAATATATTTTC+TGG - Chr3:24448841-24448860 MsG0380012781.01.T02:intron 25.0%
!! TTTTCATTCATGGATAGTAA+GGG - Chr3:24451892-24451911 MsG0380012781.01.T02:intron 25.0%
!!! ATATAGGCATTGAATATCAT+TGG - Chr3:24451222-24451241 MsG0380012781.01.T02:intron 25.0%
!!! CTTTTTGTTTACTGTAACTA+CGG - Chr3:24452871-24452890 MsG0380012781.01.T02:intron 25.0%
!!! GTATTTTTTCGTCAGTATTA+TGG - Chr3:24452693-24452712 MsG0380012781.01.T02:intron 25.0%
!!! GTGCTATAAGTTTTAGAATT+TGG + Chr3:24446276-24446295 None:intergenic 25.0%
!!! GTTGGTTTTTTAAAATGAGT+TGG - Chr3:24446460-24446479 MsG0380012781.01.T02:intron 25.0%
!!! TATAAAAAGCATCAAGTCTT+TGG + Chr3:24450683-24450702 None:intergenic 25.0%
!!! TTAGTTTCTACCCATTTTTT+TGG - Chr3:24452640-24452659 MsG0380012781.01.T02:CDS 25.0%
!!! TTATGTTGCTGGTTTTATAT+GGG + Chr3:24451098-24451117 None:intergenic 25.0%
!!! TTATTTTTGTTTCTTATGCC+AGG - Chr3:24444450-24444469 MsG0380012781.01.T02:intron 25.0%
!!! TTTATGTTGCTGGTTTTATA+TGG + Chr3:24451099-24451118 None:intergenic 25.0%
!!! TTTGTAGTTGCAATTTGTTA+AGG - Chr3:24444219-24444238 MsG0380012781.01.T02:intron 25.0%
AAAATACTGATCCATCAACT+AGG + Chr3:24446732-24446751 None:intergenic 30.0%
AAACAATCCATCCCAAATAA+TGG + Chr3:24444415-24444434 None:intergenic 30.0%
AAATGGGTAGAAACTAAAAG+TGG + Chr3:24452637-24452656 None:intergenic 30.0%
AACAAATGCTTTCAAACATC+AGG - Chr3:24447783-24447802 MsG0380012781.01.T02:intron 30.0%
AACAACTTATAAGCCTTAGT+TGG + Chr3:24445104-24445123 None:intergenic 30.0%
AACCAAATTTGGTAAATCCT+CGG - Chr3:24446849-24446868 MsG0380012781.01.T02:intron 30.0%
AAGTAATAAGCTCAGAGAAA+AGG + Chr3:24448095-24448114 None:intergenic 30.0%
AAGTCCTTAATTACACAGTA+TGG + Chr3:24446178-24446197 None:intergenic 30.0%
AATGAATTTACGCAAGACAA+CGG + Chr3:24447048-24447067 None:intergenic 30.0%
ACAACTTATAAGCCTTAGTT+GGG + Chr3:24445103-24445122 None:intergenic 30.0%
ACAGAAAATAACATGGAATG+TGG - Chr3:24450171-24450190 MsG0380012781.01.T02:intron 30.0%
ACTATCCATGAATGAAAATC+AGG + Chr3:24451890-24451909 None:intergenic 30.0%
ACTATTAATCAACTGATGCT+TGG + Chr3:24444344-24444363 None:intergenic 30.0%
AGCACGGATATAGAAAATAA+AGG - Chr3:24451522-24451541 MsG0380012781.01.T02:intron 30.0%
AGGCAGTAATTTAGAGAATT+TGG - Chr3:24444525-24444544 MsG0380012781.01.T02:intron 30.0%
ATACTGTGTAATTAAGGACT+TGG - Chr3:24446177-24446196 MsG0380012781.01.T02:intron 30.0%
ATTATTGAAAATGAGAGACC+TGG + Chr3:24446089-24446108 None:intergenic 30.0%
ATTTATGGTGTACCAAGTAT+TGG - Chr3:24449588-24449607 MsG0380012781.01.T02:intron 30.0%
ATTTGTCTATTGATGTCAGA+AGG - Chr3:24444996-24445015 MsG0380012781.01.T02:intron 30.0%
CAATCACATGATCATTTATG+AGG + Chr3:24447852-24447871 None:intergenic 30.0%
CATAAAATTGACCTACTAAC+CGG + Chr3:24452793-24452812 None:intergenic 30.0%
CTAATTTGGTTGAAATAAGG+TGG - Chr3:24452190-24452209 MsG0380012781.01.T02:CDS 30.0%
CTATCCATGAATGAAAATCA+GGG + Chr3:24451889-24451908 None:intergenic 30.0%
CTCATAAGGTGATAAACAAA+AGG - Chr3:24451053-24451072 MsG0380012781.01.T02:intron 30.0%
CTCGGTTTAGATTCTAATTA+AGG - Chr3:24446867-24446886 MsG0380012781.01.T02:intron 30.0%
CTGTATAATGGTTCCAAAAT+GGG + Chr3:24447116-24447135 None:intergenic 30.0%
CTTAATTAGAATCTAAACCG+AGG + Chr3:24446869-24446888 None:intergenic 30.0%
CTTCATAACTAATTTACTCC+TGG - Chr3:24446808-24446827 MsG0380012781.01.T02:intron 30.0%
CTTGAAGAAGTTAGTAAAGA+TGG - Chr3:24450706-24450725 MsG0380012781.01.T02:intron 30.0%
CTTGAGAAATACCAAGTATA+CGG - Chr3:24449751-24449770 MsG0380012781.01.T02:intron 30.0%
CTTTCCAATCAAATGAAAAG+GGG + Chr3:24446627-24446646 None:intergenic 30.0%
GAAAATGACTTGAAACACTA+TGG + Chr3:24446406-24446425 None:intergenic 30.0%
GAAAATGTCCAACTTTATTG+TGG + Chr3:24446764-24446783 None:intergenic 30.0%
GAATGGAAAAAACCAAGTAA+AGG + Chr3:24451772-24451791 None:intergenic 30.0%
GAGAAAATAGCATAATCTCT+TGG + Chr3:24448070-24448089 None:intergenic 30.0%
GAGCTAATTTGGTTGAAATA+AGG - Chr3:24452187-24452206 MsG0380012781.01.T02:CDS 30.0%
GCCCTTATATTTACTGAATA+TGG - Chr3:24446952-24446971 MsG0380012781.01.T02:intron 30.0%
GCTACTACTTCTTAGAATTT+GGG - Chr3:24445539-24445558 MsG0380012781.01.T02:intron 30.0%
GGAATCTGCATTTCAATAAT+AGG - Chr3:24447804-24447823 MsG0380012781.01.T02:intron 30.0%
GGTATACAAAGCCATTATTT+GGG - Chr3:24444401-24444420 MsG0380012781.01.T02:intron 30.0%
GGTTGTAAAATAGTCATTAG+TGG + Chr3:24452415-24452434 None:intergenic 30.0%
GTGCTTATTAAAAAGTTAGC+CGG - Chr3:24452771-24452790 MsG0380012781.01.T02:intron 30.0%
GTTTACTGTACATGTAAGTA+GGG + Chr3:24446378-24446397 None:intergenic 30.0%
TAACATAATATAGGGACATG+CGG - Chr3:24445193-24445212 MsG0380012781.01.T02:intron 30.0%
TACCAAATTACATTACACGT+TGG + Chr3:24452676-24452695 None:intergenic 30.0%
TATAAAGGGACTCTGTATAA+TGG + Chr3:24447128-24447147 None:intergenic 30.0%
TATACATTTGATTGCACAAG+CGG - Chr3:24450068-24450087 MsG0380012781.01.T02:intron 30.0%
TATATAGTGTGTCAAGTAAG+GGG - Chr3:24445265-24445284 MsG0380012781.01.T02:intron 30.0%
TATTCTCGTAGAGTTAAAAC+TGG - Chr3:24447950-24447969 MsG0380012781.01.T02:intron 30.0%
TCAAGCAAATAAATGGAAGA+TGG + Chr3:24451677-24451696 None:intergenic 30.0%
TCTGCAATACAATTATGTTG+TGG - Chr3:24450343-24450362 MsG0380012781.01.T02:intron 30.0%
TCTGTATAATGGTTCCAAAA+TGG + Chr3:24447117-24447136 None:intergenic 30.0%
TCTTCATCATTGTGCATTAA+TGG - Chr3:24444821-24444840 MsG0380012781.01.T02:intron 30.0%
TCTTTACTAACTTCTTCAAG+TGG + Chr3:24450706-24450725 None:intergenic 30.0%
TGAATATCATGATACATGAC+TGG - Chr3:24447215-24447234 MsG0380012781.01.T02:intron 30.0%
TGCCACATAACCAAAAAAAT+GGG + Chr3:24452653-24452672 None:intergenic 30.0%
TGCTACTACTTCTTAGAATT+TGG - Chr3:24445538-24445557 MsG0380012781.01.T02:intron 30.0%
TGGAGATCAATAACCAAATT+TGG - Chr3:24446838-24446857 MsG0380012781.01.T02:intron 30.0%
TGGTATACAAAGCCATTATT+TGG - Chr3:24444400-24444419 MsG0380012781.01.T02:intron 30.0%
TGTCATAGAAAAATGTCGTT+TGG - Chr3:24448659-24448678 MsG0380012781.01.T02:intron 30.0%
TGTTGCTACAATATGGATTT+CGG - Chr3:24449782-24449801 MsG0380012781.01.T02:intron 30.0%
TGTTTATCAAAAGGGTAATC+TGG - Chr3:24444149-24444168 MsG0380012781.01.T02:CDS 30.0%
TTAAGAAAGATGGGATGTAA+GGG - Chr3:24447992-24448011 MsG0380012781.01.T02:intron 30.0%
TTTAAGAAAGATGGGATGTA+AGG - Chr3:24447991-24448010 MsG0380012781.01.T02:intron 30.0%
TTTCATTCATGGATAGTAAG+GGG - Chr3:24451893-24451912 MsG0380012781.01.T02:intron 30.0%
TTTCCAATCAAATGAAAAGG+GGG + Chr3:24446626-24446645 None:intergenic 30.0%
TTTCTCTGAGCTTATTACTT+GGG - Chr3:24448095-24448114 MsG0380012781.01.T02:intron 30.0%
! AAATGATTTTACTGTCTGCA+TGG + Chr3:24452951-24452970 None:intergenic 30.0%
! AAGTTTTTCATCTTCTGATG+GGG - Chr3:24446644-24446663 MsG0380012781.01.T02:intron 30.0%
! AGCAAAAAGGTACATGTATT+TGG - Chr3:24450014-24450033 MsG0380012781.01.T02:intron 30.0%
! ATATCTTCATCATTGACTAC+AGG - Chr3:24445403-24445422 MsG0380012781.01.T02:intron 30.0%
! ATCTAAACTTTGTTTGGTCA+TGG - Chr3:24449084-24449103 MsG0380012781.01.T02:intron 30.0%
! CAATTTTATCATATGTTGGG+TGG + Chr3:24447313-24447332 None:intergenic 30.0%
! GAAAGTTTTTCATCTTCTGA+TGG - Chr3:24446642-24446661 MsG0380012781.01.T02:intron 30.0%
! GAAATTTGAGTTAAAAGACC+AGG - Chr3:24444245-24444264 MsG0380012781.01.T02:intron 30.0%
! GATATTAGCTTGAAGTAACA+AGG - Chr3:24450278-24450297 MsG0380012781.01.T02:intron 30.0%
! GCATCTTCCCAAAATTTTAA+AGG - Chr3:24450255-24450274 MsG0380012781.01.T02:intron 30.0%
! GTAACTTATCTACGTGTTTT+TGG + Chr3:24450140-24450159 None:intergenic 30.0%
! TAACTCTAGTTTGTAGCAAA+TGG - Chr3:24445492-24445511 MsG0380012781.01.T02:intron 30.0%
! TAGGGTGTGTGATTTTAAAT+GGG - Chr3:24445220-24445239 MsG0380012781.01.T02:intron 30.0%
! TGAATTTTCTTTGGGCTAAA+GGG - Chr3:24449270-24449289 MsG0380012781.01.T02:intron 30.0%
! TGATTTTAAATGGGCAAATG+AGG - Chr3:24445229-24445248 MsG0380012781.01.T02:intron 30.0%
! TGCTTATATTTAAGACCGAA+GGG + Chr3:24449998-24450017 None:intergenic 30.0%
! TGGTATTACTTGTATTGATG+AGG - Chr3:24445888-24445907 MsG0380012781.01.T02:intron 30.0%
! TGTGATTTTATGATCACACT+AGG - Chr3:24446239-24446258 MsG0380012781.01.T02:intron 30.0%
! TTAAAATGAGTTGGCTATAC+TGG - Chr3:24446469-24446488 MsG0380012781.01.T02:intron 30.0%
! TTAGGGTGTGTGATTTTAAA+TGG - Chr3:24445219-24445238 MsG0380012781.01.T02:intron 30.0%
! TTGAATTTTCTTTGGGCTAA+AGG - Chr3:24449269-24449288 MsG0380012781.01.T02:intron 30.0%
! TTGCTTATATTTAAGACCGA+AGG + Chr3:24449999-24450018 None:intergenic 30.0%
! TTTGTAACCTAAAAGGTACA+GGG + Chr3:24452456-24452475 None:intergenic 30.0%
! TTTGTGTTTGAGTTATGCAT+AGG - Chr3:24451394-24451413 MsG0380012781.01.T02:CDS 30.0%
! TTTTAGTGCCTGCAAATATA+TGG - Chr3:24452547-24452566 MsG0380012781.01.T02:CDS 30.0%
! TTTTCCCTGATTTTCATTCA+TGG - Chr3:24451882-24451901 MsG0380012781.01.T02:intron 30.0%
! TTTTCTCTGAGCTTATTACT+TGG - Chr3:24448094-24448113 MsG0380012781.01.T02:intron 30.0%
! TTTTGGTCCCTCTAAATTTT+CGG + Chr3:24448734-24448753 None:intergenic 30.0%
!! AACGTTGATAGTGCAATTTA+TGG - Chr3:24449573-24449592 MsG0380012781.01.T02:intron 30.0%
!! AAGTTGATGAATCATCTCTT+TGG - Chr3:24450381-24450400 MsG0380012781.01.T02:intron 30.0%
!! AGTCTAAAGTGATTTTGCAT+AGG + Chr3:24447268-24447287 None:intergenic 30.0%
!! ATATAGCTTGTAAGAGTATC+CGG - Chr3:24445344-24445363 MsG0380012781.01.T02:CDS 30.0%
!! ATCTATTTCTATACTCCCTT+CGG - Chr3:24449980-24449999 MsG0380012781.01.T02:intron 30.0%
!! CTTTTAGTTAACACTAACGT+GGG + Chr3:24452269-24452288 None:intergenic 30.0%
!! TATACAAGGAAAGTTTGTTG+CGG - Chr3:24444856-24444875 MsG0380012781.01.T02:intron 30.0%
!! TTATGTTGCTTTGGCAAATA+GGG - Chr3:24446577-24446596 MsG0380012781.01.T02:intron 30.0%
!! TTTATGTTGCTTTGGCAAAT+AGG - Chr3:24446576-24446595 MsG0380012781.01.T02:intron 30.0%
!! TTTTCATTTTGGTCTGTCTA+CGG - Chr3:24446523-24446542 MsG0380012781.01.T02:intron 30.0%
!! TTTTTACGTTGTTTGGTAGT+AGG + Chr3:24451263-24451282 None:intergenic 30.0%
!!! AGTTGATGGATCAGTATTTT+TGG - Chr3:24446732-24446751 MsG0380012781.01.T02:intron 30.0%
!!! ATAGTTTTATTGAGTGGTCA+AGG + Chr3:24446134-24446153 None:intergenic 30.0%
!!! ATGTTGTGTTTGTGCTTTTT+TGG - Chr3:24446346-24446365 MsG0380012781.01.T02:intron 30.0%
!!! CATTGGATAGTTTTATTGAG+TGG + Chr3:24446140-24446159 None:intergenic 30.0%
!!! TACCCATTTTTTTGGTTATG+TGG - Chr3:24452648-24452667 MsG0380012781.01.T02:intron 30.0%
!!! TAGTTTTATTGAGTGGTCAA+GGG + Chr3:24446133-24446152 None:intergenic 30.0%
!!! TTTTTGAATTTGGCTCTGAA+GGG - Chr3:24445035-24445054 MsG0380012781.01.T02:intron 30.0%
!!! TTTTTTGAATTTGGCTCTGA+AGG - Chr3:24445034-24445053 MsG0380012781.01.T02:intron 30.0%
AAAATAAGGACCAAGAGACT+TGG - Chr3:24450622-24450641 MsG0380012781.01.T02:intron 35.0%
AAAGACCAGGGTTCAAATAT+CGG - Chr3:24444258-24444277 MsG0380012781.01.T02:intron 35.0%
AAATGTTAGGGATCAAAACG+GGG + Chr3:24452605-24452624 None:intergenic 35.0%
AACAAGCAGTATCAAGAAGA+TGG - Chr3:24450301-24450320 MsG0380012781.01.T02:intron 35.0%
AACCGAGGATTTACCAAATT+TGG + Chr3:24446854-24446873 None:intergenic 35.0%
AAGTCATCAATGAAGGAAAG+AGG - Chr3:24450568-24450587 MsG0380012781.01.T02:intron 35.0%
AAGTCATTCCTATCCAGAAT+TGG + Chr3:24448194-24448213 None:intergenic 35.0%
AAGTTAGTAAAGATGGTCAG+TGG - Chr3:24450713-24450732 MsG0380012781.01.T02:intron 35.0%
ACAATCAAAATCCACGTGTA+AGG + Chr3:24447693-24447712 None:intergenic 35.0%
ACTGACAGGTACATTTGTAT+TGG + Chr3:24444903-24444922 None:intergenic 35.0%
ACTGATGCTTGGAAACAATA+AGG + Chr3:24444333-24444352 None:intergenic 35.0%
ACTTCTTAGAATTTGGGCTT+GGG - Chr3:24445545-24445564 MsG0380012781.01.T02:intron 35.0%
AGTCAGCTGTTAATATCACA+AGG - Chr3:24451976-24451995 MsG0380012781.01.T02:intron 35.0%
AGTCATTCCTATCCAGAATT+GGG + Chr3:24448193-24448212 None:intergenic 35.0%
AGTGTCTTACTTTGTGGAAA+TGG - Chr3:24450846-24450865 MsG0380012781.01.T02:intron 35.0%
ATAACATGGAATGTGGAATC+TGG - Chr3:24450178-24450197 MsG0380012781.01.T02:intron 35.0%
ATAGCTACAGACCAGTAAAA+TGG + Chr3:24452827-24452846 None:intergenic 35.0%
ATATAGTGTGTCAAGTAAGG+GGG - Chr3:24445266-24445285 MsG0380012781.01.T02:intron 35.0%
ATCATTGGTATAAAGGACCT+TGG - Chr3:24451237-24451256 MsG0380012781.01.T02:CDS 35.0%
ATCATTTATGAGGAGTCGAA+GGG + Chr3:24447842-24447861 None:intergenic 35.0%
ATCCATCAACTAGGACTATA+TGG + Chr3:24446723-24446742 None:intergenic 35.0%
ATGGATAGTGTCTTACTTTG+TGG - Chr3:24450840-24450859 MsG0380012781.01.T02:intron 35.0%
ATTAGAGGCCAGATCATTAA+TGG + Chr3:24449445-24449464 None:intergenic 35.0%
ATTGTTTCCCAATTCTGGAT+AGG - Chr3:24448183-24448202 MsG0380012781.01.T02:intron 35.0%
CAACTTATAAGCCTTAGTTG+GGG + Chr3:24445102-24445121 None:intergenic 35.0%
CACAAGTAAAACTCAAGGTA+TGG + Chr3:24447072-24447091 None:intergenic 35.0%
CACCAACGTGTAATGTAATT+TGG - Chr3:24452671-24452690 MsG0380012781.01.T02:intron 35.0%
CAGCCGGTCAAAAAAAAAAA+AGG + Chr3:24448295-24448314 None:intergenic 35.0%
CATCCTATTGTGCTTCAAAT+TGG - Chr3:24444502-24444521 MsG0380012781.01.T02:intron 35.0%
CATGCTGTCAAGCAAATAAA+TGG + Chr3:24451684-24451703 None:intergenic 35.0%
CGACTTTGTCACATTAGATT+GGG - Chr3:24447488-24447507 MsG0380012781.01.T02:intron 35.0%
CGCATATACAATACTTTGGA+GGG + Chr3:24449909-24449928 None:intergenic 35.0%
CGTATACTTGGTATTTCTCA+AGG + Chr3:24449753-24449772 None:intergenic 35.0%
CGTCAAACTTCCAGTTTAAT+TGG + Chr3:24448828-24448847 None:intergenic 35.0%
CTATATGGCTAAAGAATACG+AGG + Chr3:24445330-24445349 None:intergenic 35.0%
CTTAATTACACAGTATGGCA+AGG + Chr3:24446173-24446192 None:intergenic 35.0%
CTTGCCATACTGTGTAATTA+AGG - Chr3:24446171-24446190 MsG0380012781.01.T02:intron 35.0%
GAAATGTTAGGGATCAAAAC+GGG + Chr3:24452606-24452625 None:intergenic 35.0%
GACTTGAAACACTATGGAAT+GGG + Chr3:24446400-24446419 None:intergenic 35.0%
GAGAAAGATGAAAACGAAAG+AGG - Chr3:24451360-24451379 MsG0380012781.01.T02:intron 35.0%
GAGCACTTAGAAAATCTGAA+AGG - Chr3:24449935-24449954 MsG0380012781.01.T02:intron 35.0%
GAGTCATTTGTGAGCTAATT+TGG - Chr3:24452176-24452195 MsG0380012781.01.T02:CDS 35.0%
GATAATATACCGTGCAAGTT+TGG + Chr3:24451840-24451859 None:intergenic 35.0%
GATCCCTAACATTTCCAAAA+TGG - Chr3:24452611-24452630 MsG0380012781.01.T02:CDS 35.0%
GGAAATGTTAGGGATCAAAA+CGG + Chr3:24452607-24452626 None:intergenic 35.0%
GGATACTCTTACAAGCTATA+TGG + Chr3:24445345-24445364 None:intergenic 35.0%
GGTTTACTGTACATGTAAGT+AGG + Chr3:24446379-24446398 None:intergenic 35.0%
GTCAGGTGATTTCATTTACA+AGG - Chr3:24445625-24445644 MsG0380012781.01.T02:intron 35.0%
GTCTCATATCAAAACATGCT+TGG - Chr3:24444094-24444113 MsG0380012781.01.T02:CDS 35.0%
GTGAATTGAGCGATCAAATT+GGG - Chr3:24450462-24450481 MsG0380012781.01.T02:intron 35.0%
GTGCCACATAACCAAAAAAA+TGG + Chr3:24452654-24452673 None:intergenic 35.0%
GTTGAAGTCCATTAATGATC+TGG - Chr3:24449434-24449453 MsG0380012781.01.T02:intron 35.0%
TAAAAAGTTAGCCGGTTAGT+AGG - Chr3:24452779-24452798 MsG0380012781.01.T02:intron 35.0%
TAAGAAAGATGGGATGTAAG+GGG - Chr3:24447993-24448012 MsG0380012781.01.T02:intron 35.0%
TAATAAGCTCAGAGAAAAGG+CGG + Chr3:24448092-24448111 None:intergenic 35.0%
TACAAAGCCATTATTTGGGA+TGG - Chr3:24444405-24444424 MsG0380012781.01.T02:intron 35.0%
TACTTCTTAGAATTTGGGCT+TGG - Chr3:24445544-24445563 MsG0380012781.01.T02:intron 35.0%
TAGTAGCAAACTAGCATCTA+AGG + Chr3:24445526-24445545 None:intergenic 35.0%
TCCATCAACTAGGACTATAT+GGG + Chr3:24446722-24446741 None:intergenic 35.0%
TCTCCGCATATACAATACTT+TGG + Chr3:24449913-24449932 None:intergenic 35.0%
TGAATTATGAAATGCCTAGC+AGG + Chr3:24445665-24445684 None:intergenic 35.0%
TGACTTGAAACACTATGGAA+TGG + Chr3:24446401-24446420 None:intergenic 35.0%
TGTGAATTGAGCGATCAAAT+TGG - Chr3:24450461-24450480 MsG0380012781.01.T02:intron 35.0%
TGTTAGCAAAAAGATCTCCA+CGG + Chr3:24453042-24453061 None:intergenic 35.0%
TTAGAGGGACCAAAAATTGA+AGG - Chr3:24448739-24448758 MsG0380012781.01.T02:intron 35.0%
TTATCTGTCCAATCCATCAT+TGG + Chr3:24444054-24444073 None:intergenic 35.0%
TTCCTCACCAGGTAAAAAAT+AGG - Chr3:24449042-24449061 MsG0380012781.01.T02:intron 35.0%
TTTAAATGGGCAAATGAGGT+GGG - Chr3:24445233-24445252 MsG0380012781.01.T02:intron 35.0%
TTTATGACCAGTGATGTGAT+AGG - Chr3:24450592-24450611 MsG0380012781.01.T02:intron 35.0%
TTTATGATCACACTAGGACT+GGG - Chr3:24446245-24446264 MsG0380012781.01.T02:intron 35.0%
TTTATTGGGACATACTTCAG+TGG + Chr3:24445743-24445762 None:intergenic 35.0%
TTTCAGACCTAAGAAATTGC+AGG + Chr3:24449138-24449157 None:intergenic 35.0%
TTTCTCCATTTCATGGAATC+AGG - Chr3:24446780-24446799 MsG0380012781.01.T02:intron 35.0%
TTTGAAAATGAGGACTGACA+AGG - Chr3:24449326-24449345 MsG0380012781.01.T02:intron 35.0%
TTTGTTCACAGTTGAAGTAG+TGG - Chr3:24446912-24446931 MsG0380012781.01.T02:intron 35.0%
! AATTTACTCCTGGGAGTTTT+TGG - Chr3:24446818-24446837 MsG0380012781.01.T02:intron 35.0%
! ACTTGACCTTTTTATGTTGC+TGG + Chr3:24451109-24451128 None:intergenic 35.0%
! ATGGATTGCTTTCTAACCTT+TGG + Chr3:24444761-24444780 None:intergenic 35.0%
! CAGACAAACAACAAGCTTTT+AGG + Chr3:24445606-24445625 None:intergenic 35.0%
! CATACCTTGAGTTTTACTTG+TGG - Chr3:24447070-24447089 MsG0380012781.01.T02:intron 35.0%
! CGGTTAGTAGGTCAATTTTA+TGG - Chr3:24452791-24452810 MsG0380012781.01.T02:intron 35.0%
! CTCAAGATACTCAATTTGCT+AGG + Chr3:24452514-24452533 None:intergenic 35.0%
! CTCTACGAGAATACACTTTT+AGG + Chr3:24447943-24447962 None:intergenic 35.0%
! CTTTGTAACCTAAAAGGTAC+AGG + Chr3:24452457-24452476 None:intergenic 35.0%
! CTTTGTTCATGTCTTTTTCC+AGG + Chr3:24450108-24450127 None:intergenic 35.0%
! GAAACTAAAAGTGGCCATTT+TGG + Chr3:24452628-24452647 None:intergenic 35.0%
! GGAGATCTTTTTGCTAACAT+TGG - Chr3:24453043-24453062 MsG0380012781.01.T02:CDS 35.0%
! TATTTTACAACCGTTCCTGA+GGG - Chr3:24452423-24452442 MsG0380012781.01.T02:intron 35.0%
! TGATAGGTGGCCTTAAAATA+AGG - Chr3:24450608-24450627 MsG0380012781.01.T02:intron 35.0%
! TGGACATTTTCTCCATTTCA+TGG - Chr3:24446773-24446792 MsG0380012781.01.T02:intron 35.0%
! TTTCCCCCTTTTCATTTGAT+TGG - Chr3:24446620-24446639 MsG0380012781.01.T02:intron 35.0%
! TTTGGTCCCTCTAAATTTTC+GGG + Chr3:24448733-24448752 None:intergenic 35.0%
! TTTTAAATGGGCAAATGAGG+TGG - Chr3:24445232-24445251 MsG0380012781.01.T02:intron 35.0%
! TTTTATGATCACACTAGGAC+TGG - Chr3:24446244-24446263 MsG0380012781.01.T02:intron 35.0%
! TTTTGAACCCTGTACCTTTT+AGG - Chr3:24452446-24452465 MsG0380012781.01.T02:intron 35.0%
!! AAAACATGCTTGGCTCTATA+CGG - Chr3:24444104-24444123 MsG0380012781.01.T02:CDS 35.0%
!! AGTGGATTACTGATTGATTG+AGG - Chr3:24446930-24446949 MsG0380012781.01.T02:intron 35.0%
!! ATCAATGCAGCTCTAAAGAT+CGG - Chr3:24447715-24447734 MsG0380012781.01.T02:intron 35.0%
!! CCTCCAAAGTATTGTATATG+CGG - Chr3:24449907-24449926 MsG0380012781.01.T02:intron 35.0%
!! GCTTAGCTTTGTAACCTAAA+AGG + Chr3:24452463-24452482 None:intergenic 35.0%
!! GCTTTTAGTTAACACTAACG+TGG + Chr3:24452270-24452289 None:intergenic 35.0%
!! TGGCCATTTTGGAAATGTTA+GGG + Chr3:24452617-24452636 None:intergenic 35.0%
!! TTTCATTTTGGTCTGTCTAC+GGG - Chr3:24446524-24446543 MsG0380012781.01.T02:intron 35.0%
!! TTTTCAACTTCTGAGAACAG+AGG - Chr3:24448895-24448914 MsG0380012781.01.T02:intron 35.0%
!!! CTGCATTCCTATTTTTTACC+TGG + Chr3:24449052-24449071 None:intergenic 35.0%
!!! CTTTTTTTTTTTTGACCGGC+TGG - Chr3:24448293-24448312 MsG0380012781.01.T02:intron 35.0%
!!! GGTTTTGGAAAACCCTATAT+AGG - Chr3:24451206-24451225 MsG0380012781.01.T02:intron 35.0%
!!! GTCTCTTGGTCCTTATTTTA+AGG + Chr3:24450621-24450640 None:intergenic 35.0%
!!! TGGATCAGTATTTTTGGTTC+AGG - Chr3:24446738-24446757 MsG0380012781.01.T02:intron 35.0%
!!! TTCCTATTTTTTACCTGGTG+AGG + Chr3:24449047-24449066 None:intergenic 35.0%
AACTGTGAGAGACATTGTGA+AGG - Chr3:24449807-24449826 MsG0380012781.01.T02:intron 40.0%
AAGAAAGATGGGATGTAAGG+GGG - Chr3:24447994-24448013 MsG0380012781.01.T02:intron 40.0%
AAGAAATTGCAGGAGATCAG+TGG + Chr3:24449128-24449147 None:intergenic 40.0%
AAGCAGTATCAAGAAGATGG+TGG - Chr3:24450304-24450323 MsG0380012781.01.T02:intron 40.0%
AATGCTAAGAGGACAAGATG+GGG - Chr3:24445133-24445152 MsG0380012781.01.T02:intron 40.0%
ACAATAGGATGTTGATCTGG+AGG + Chr3:24444493-24444512 None:intergenic 40.0%
ACCTAGAAGCTTGAGCTTAT+AGG + Chr3:24444306-24444325 None:intergenic 40.0%
ACGTCTTATGCTTGAACCAA+AGG - Chr3:24444742-24444761 MsG0380012781.01.T02:intron 40.0%
AGCACAATAGGATGTTGATC+TGG + Chr3:24444496-24444515 None:intergenic 40.0%
AGGTAGAGGAATAATAGGTC+AGG - Chr3:24450933-24450952 MsG0380012781.01.T02:intron 40.0%
ATCACTTTAGACTTGAAGCG+TGG - Chr3:24447275-24447294 MsG0380012781.01.T02:intron 40.0%
ATCTGGTTATGTAGCAGAGA+AGG - Chr3:24450195-24450214 MsG0380012781.01.T02:intron 40.0%
ATGCATTGCAGAGTTCAAAG+TGG - Chr3:24451009-24451028 MsG0380012781.01.T02:intron 40.0%
ATGTATATCACTTCCTCACC+AGG - Chr3:24449031-24449050 MsG0380012781.01.T02:intron 40.0%
ATTCGACATTTGACACTGAC+AGG + Chr3:24444917-24444936 None:intergenic 40.0%
ATTGATCTCCAAAAACTCCC+AGG + Chr3:24446829-24446848 None:intergenic 40.0%
CAAAAGGATGAATTCTCTGC+AGG - Chr3:24451069-24451088 MsG0380012781.01.T02:intron 40.0%
CAATTATGTTGTGGAGTGTG+TGG - Chr3:24450352-24450371 MsG0380012781.01.T02:intron 40.0%
CAGAACTAGTGTTCACAAGT+TGG - Chr3:24451944-24451963 MsG0380012781.01.T02:intron 40.0%
CATAAAGCTCACAGCTATAG+AGG + Chr3:24448137-24448156 None:intergenic 40.0%
CATAAGTGTTATGCCCTGAA+CGG + Chr3:24450823-24450842 None:intergenic 40.0%
CCATCAACTAGGACTATATG+GGG + Chr3:24446721-24446740 None:intergenic 40.0%
CCGCATATACAATACTTTGG+AGG + Chr3:24449910-24449929 None:intergenic 40.0%
CCTATTGTGCTTCAAATTGG+AGG - Chr3:24444505-24444524 MsG0380012781.01.T02:intron 40.0%
CGAGGCAAAGATCTTAATGA+CGG + Chr3:24445312-24445331 None:intergenic 40.0%
CGTCAGTATTATGGGAATCA+GGG - Chr3:24452702-24452721 MsG0380012781.01.T02:intron 40.0%
CTAATTAAGGCAACCACACA+TGG - Chr3:24446880-24446899 MsG0380012781.01.T02:intron 40.0%
CTGACCACAAGTAAAACTCA+AGG + Chr3:24447077-24447096 None:intergenic 40.0%
CTGATCTCCTGCAATTTCTT+AGG - Chr3:24449128-24449147 MsG0380012781.01.T02:intron 40.0%
CTTATTACTTGGGCTAAGAG+AGG - Chr3:24448105-24448124 MsG0380012781.01.T02:intron 40.0%
CTTGTCCTCTTAGCATTCAT+GGG + Chr3:24445130-24445149 None:intergenic 40.0%
CTTGTCTGACTCTTGTACAT+AGG - Chr3:24452323-24452342 MsG0380012781.01.T02:intron 40.0%
GAAGATGCAATCCTTACTTC+TGG + Chr3:24450243-24450262 None:intergenic 40.0%
GAATGCTAAGAGGACAAGAT+GGG - Chr3:24445132-24445151 MsG0380012781.01.T02:intron 40.0%
GACCAAGGTAGAGGAATAAT+AGG - Chr3:24450928-24450947 MsG0380012781.01.T02:intron 40.0%
GACCTATTATTCCTCTACCT+TGG + Chr3:24450933-24450952 None:intergenic 40.0%
GACGCTTCAGAATATTAGAC+CGG + Chr3:24445366-24445385 None:intergenic 40.0%
GAGAGACCCAAAATCTCATA+AGG - Chr3:24451039-24451058 MsG0380012781.01.T02:intron 40.0%
GATCATTTATGAGGAGTCGA+AGG + Chr3:24447843-24447862 None:intergenic 40.0%
GCGACTTTGTCACATTAGAT+TGG - Chr3:24447487-24447506 MsG0380012781.01.T02:intron 40.0%
GTAATGTCCTATGTAACCTC+AGG + Chr3:24452492-24452511 None:intergenic 40.0%
GTCAGTGTCAAATGTCGAAT+CGG - Chr3:24444917-24444936 MsG0380012781.01.T02:intron 40.0%
GTTATGATTTCAACAGCCCT+TGG - Chr3:24449538-24449557 MsG0380012781.01.T02:intron 40.0%
GTTATTCCATTCCAAGGTCA+AGG - Chr3:24445065-24445084 MsG0380012781.01.T02:intron 40.0%
TAAAGGGTTGGACTAAGTAC+AGG - Chr3:24449286-24449305 MsG0380012781.01.T02:intron 40.0%
TAGACTATCAGCATGTTCAC+TGG + Chr3:24447440-24447459 None:intergenic 40.0%
TAGAGGAATAATAGGTCAGG+AGG - Chr3:24450936-24450955 MsG0380012781.01.T02:intron 40.0%
TCCTATAAGCTCAAGCTTCT+AGG - Chr3:24444302-24444321 MsG0380012781.01.T02:intron 40.0%
TCGTCAGTATTATGGGAATC+AGG - Chr3:24452701-24452720 MsG0380012781.01.T02:intron 40.0%
TCTTGTCCTCTTAGCATTCA+TGG + Chr3:24445131-24445150 None:intergenic 40.0%
TGAATGCTAAGAGGACAAGA+TGG - Chr3:24445131-24445150 MsG0380012781.01.T02:intron 40.0%
TGACAAAGTCGCAAACAACA+AGG + Chr3:24447479-24447498 None:intergenic 40.0%
TGACATGAACTTTCACCTTG+AGG + Chr3:24452055-24452074 None:intergenic 40.0%
TGGAAGGTTATTCCATTCCA+AGG - Chr3:24445059-24445078 MsG0380012781.01.T02:intron 40.0%
TTAGACCCATGAATGCTAAG+AGG - Chr3:24445122-24445141 MsG0380012781.01.T02:intron 40.0%
TTCACAATGTCTCTCACAGT+TGG + Chr3:24449808-24449827 None:intergenic 40.0%
TTGCTCCTGATTCCATGAAA+TGG + Chr3:24446788-24446807 None:intergenic 40.0%
TTGTGGAAATGGTTGCACAT+GGG - Chr3:24450857-24450876 MsG0380012781.01.T02:intron 40.0%
TTTATTGAGTGGTCAAGGGA+GGG + Chr3:24446129-24446148 None:intergenic 40.0%
TTTGTGGAAATGGTTGCACA+TGG - Chr3:24450856-24450875 MsG0380012781.01.T02:intron 40.0%
! AACAGCCCTTGGCATATTTT+GGG - Chr3:24449549-24449568 MsG0380012781.01.T02:intron 40.0%
! ACTAGTGTTCACAAGTTGGA+TGG - Chr3:24451948-24451967 MsG0380012781.01.T02:intron 40.0%
! AGGTTTTTCCACGTTTTTGC+TGG - Chr3:24446688-24446707 MsG0380012781.01.T02:intron 40.0%
! ATCAAAGCATCTCGAGACAA+CGG - Chr3:24451174-24451193 MsG0380012781.01.T02:intron 40.0%
! CAAACATCTAGAACCATGTG+TGG + Chr3:24446896-24446915 None:intergenic 40.0%
! CAGTCCTCATTTTCAAATCG+AGG + Chr3:24449323-24449342 None:intergenic 40.0%
! CCTCCAATTTGAAGCACAAT+AGG + Chr3:24444508-24444527 None:intergenic 40.0%
! CTATTTTACAACCGTTCCTG+AGG - Chr3:24452422-24452441 MsG0380012781.01.T02:intron 40.0%
! GACTCAGTGTTGCTACAATA+TGG - Chr3:24449775-24449794 MsG0380012781.01.T02:intron 40.0%
! GATGTGTCCGTATTGTTGTT+AGG - Chr3:24452724-24452743 MsG0380012781.01.T02:intron 40.0%
! GATTAGGGTTGCCTTTTGTT+TGG - Chr3:24451320-24451339 MsG0380012781.01.T02:intron 40.0%
! GCATGCAGATACCATTTTAC+TGG - Chr3:24452813-24452832 MsG0380012781.01.T02:intron 40.0%
! GGGAGACTTTTTACGTTGTT+TGG + Chr3:24451270-24451289 None:intergenic 40.0%
! GGTATCTAGAGCCAAACAAA+AGG + Chr3:24451334-24451353 None:intergenic 40.0%
! GGTTTTTCCACGTTTTTGCT+GGG - Chr3:24446689-24446708 MsG0380012781.01.T02:intron 40.0%
! GTGTTTGAGTTATGCATAGG+AGG - Chr3:24451397-24451416 MsG0380012781.01.T02:CDS 40.0%
! TGAAGCGTCTTGTACTATGA+CGG - Chr3:24445377-24445396 MsG0380012781.01.T02:intron 40.0%
! TGTGCCTCGATTTGAAAATG+AGG - Chr3:24449316-24449335 MsG0380012781.01.T02:intron 40.0%
! TTTTATTGAGTGGTCAAGGG+AGG + Chr3:24446130-24446149 None:intergenic 40.0%
! TTTTCTTTGGGCTAAAGGGT+TGG - Chr3:24449274-24449293 MsG0380012781.01.T02:intron 40.0%
!! AAGCTTGTTGTTTGTCTGTC+AGG - Chr3:24445608-24445627 MsG0380012781.01.T02:intron 40.0%
!! ACTGGTCTGTAGCTATCTTT+TGG - Chr3:24452831-24452850 MsG0380012781.01.T02:intron 40.0%
!! CTTAAGTTGAATACCTTGCC+AGG - Chr3:24452151-24452170 MsG0380012781.01.T02:intron 40.0%
!! GTGAACACTAGTTCTGTGAA+GGG + Chr3:24451940-24451959 None:intergenic 40.0%
!! GTGGCCATTTTGGAAATGTT+AGG + Chr3:24452618-24452637 None:intergenic 40.0%
!! TGTGAACACTAGTTCTGTGA+AGG + Chr3:24451941-24451960 None:intergenic 40.0%
!!! GTTTTTTCCATTCTGAGCCT+GGG - Chr3:24451779-24451798 MsG0380012781.01.T02:intron 40.0%
AAAGATGGTCAGTGGTAGCT+AGG - Chr3:24450721-24450740 MsG0380012781.01.T02:intron 45.0%
AAAGCTAAGCTCTTAGCCTG+AGG - Chr3:24452473-24452492 MsG0380012781.01.T02:intron 45.0%
AAATAGGGAATAAACGGCCG+TGG + Chr3:24445436-24445455 None:intergenic 45.0%
AAATGGTTGCACATGGGATG+AGG - Chr3:24450863-24450882 MsG0380012781.01.T02:intron 45.0%
AAGATGGTCAGTGGTAGCTA+GGG - Chr3:24450722-24450741 MsG0380012781.01.T02:intron 45.0%
ACAAATGACTCATCCTGGCA+AGG + Chr3:24452167-24452186 None:intergenic 45.0%
ACACTGAGTCTCCGTATACT+TGG + Chr3:24449765-24449784 None:intergenic 45.0%
ACCATACAGAACAAGAGACG+GGG - Chr3:24453081-24453100 MsG0380012781.01.T02:CDS 45.0%
ACGTCAGAAGATGATATCGC+TGG - Chr3:24450966-24450985 MsG0380012781.01.T02:intron 45.0%
ACGTTCCCCAAAATATGCCA+AGG + Chr3:24449558-24449577 None:intergenic 45.0%
AGCAATTCCAGACTCAGTCT+TGG - Chr3:24452988-24453007 MsG0380012781.01.T02:CDS 45.0%
AGCTCACAAATGACTCATCC+TGG + Chr3:24452172-24452191 None:intergenic 45.0%
AGGGATCATATGTGGTGTAG+TGG - Chr3:24450741-24450760 MsG0380012781.01.T02:intron 45.0%
ATAGGGACATGCGGCATTTA+GGG - Chr3:24445202-24445221 MsG0380012781.01.T02:intron 45.0%
ATGACCAGTGATGTGATAGG+TGG - Chr3:24450595-24450614 MsG0380012781.01.T02:intron 45.0%
ATTGGGACATACTTCAGTGG+AGG + Chr3:24445740-24445759 None:intergenic 45.0%
ATTTGGGCTTGGGCGTAATA+AGG - Chr3:24445555-24445574 MsG0380012781.01.T02:intron 45.0%
CACCATACAGAACAAGAGAC+GGG - Chr3:24453080-24453099 MsG0380012781.01.T02:CDS 45.0%
CACGTGTAAGGATATCAGCA+AGG + Chr3:24447681-24447700 None:intergenic 45.0%
CCACCATACAGAACAAGAGA+CGG - Chr3:24453079-24453098 MsG0380012781.01.T02:CDS 45.0%
CCCCATATAGTCCTAGTTGA+TGG - Chr3:24446718-24446737 MsG0380012781.01.T02:intron 45.0%
CCTCGAGAAGTCATCAATGA+AGG - Chr3:24450561-24450580 MsG0380012781.01.T02:intron 45.0%
CGACGTGTAAGACCAATACT+TGG + Chr3:24449603-24449622 None:intergenic 45.0%
CGTTCAGGGCATAACACTTA+TGG - Chr3:24450821-24450840 MsG0380012781.01.T02:intron 45.0%
CGTTCCCCAAAATATGCCAA+GGG + Chr3:24449557-24449576 None:intergenic 45.0%
CTCAGCACAGGTAATTGAAG+CGG + Chr3:24452577-24452596 None:intergenic 45.0%
CTCTTAGCCTGAGGTTACAT+AGG - Chr3:24452482-24452501 MsG0380012781.01.T02:intron 45.0%
CTTATGCCAGGACAGATTCT+TGG - Chr3:24444462-24444481 MsG0380012781.01.T02:intron 45.0%
CTTGCTGATATCCTTACACG+TGG - Chr3:24447679-24447698 MsG0380012781.01.T02:intron 45.0%
CTTGGTATTTCTCAAGGACC+TGG + Chr3:24449747-24449766 None:intergenic 45.0%
CTTTCTCACACCAAGTCTCT+TGG + Chr3:24450635-24450654 None:intergenic 45.0%
GAACTTTCACCTTGAGGACA+AGG + Chr3:24452049-24452068 None:intergenic 45.0%
GACTCAGTCCTGCTGAAAAT+CGG - Chr3:24445708-24445727 MsG0380012781.01.T02:intron 45.0%
GATATGCCAAGAATCTGTCC+TGG + Chr3:24444471-24444490 None:intergenic 45.0%
GCGGAAGACCATATATTTGC+AGG + Chr3:24452558-24452577 None:intergenic 45.0%
GGCAAGGAGAAAGTGATCAT+TGG + Chr3:24446157-24446176 None:intergenic 45.0%
GGTTCAGGCCACAATAAAGT+TGG - Chr3:24446753-24446772 MsG0380012781.01.T02:intron 45.0%
GTAAAGGCTGCAGCAAACAA+TGG + Chr3:24451756-24451775 None:intergenic 45.0%
GTCTACTGATGCAAGAATCC+AGG - Chr3:24446068-24446087 MsG0380012781.01.T02:intron 45.0%
GTGCTTGAATGAGATTGGGT+AGG - Chr3:24446668-24446687 MsG0380012781.01.T02:intron 45.0%
TAAGCCTTAGTTGGGGTTTG+TGG + Chr3:24445095-24445114 None:intergenic 45.0%
TACGTTTCACCTTGTCCTCA+AGG - Chr3:24452037-24452056 MsG0380012781.01.T02:intron 45.0%
TATAGGGACATGCGGCATTT+AGG - Chr3:24445201-24445220 MsG0380012781.01.T02:intron 45.0%
TATCGCTGGTACATGTACGA+AGG - Chr3:24450980-24450999 MsG0380012781.01.T02:intron 45.0%
TCAGCAAAGAAGCTGTTCAC+TGG + Chr3:24447538-24447557 None:intergenic 45.0%
TCTCTTCTCTATCACCTGCT+AGG - Chr3:24445648-24445667 MsG0380012781.01.T02:intron 45.0%
TCTCTTGTTCTGTATGGTGG+AGG + Chr3:24453079-24453098 None:intergenic 45.0%
TGCTTTGGCAAATAGGGTCT+TGG - Chr3:24446583-24446602 MsG0380012781.01.T02:intron 45.0%
TGGTAGCTAGGGATCATATG+TGG - Chr3:24450733-24450752 MsG0380012781.01.T02:intron 45.0%
TGGTTATGTAGCAGAGAAGG+TGG - Chr3:24450198-24450217 MsG0380012781.01.T02:intron 45.0%
TGTCAAATGTCGAATCGGTG+TGG - Chr3:24444922-24444941 MsG0380012781.01.T02:intron 45.0%
TTCAGCCGATATTTGAACCC+TGG + Chr3:24444266-24444285 None:intergenic 45.0%
TTCTGCTGTCCAAACTTGCA+CGG - Chr3:24451828-24451847 MsG0380012781.01.T02:intron 45.0%
TTGTTGCGTGGATTTCAGTG+TGG - Chr3:24444026-24444045 MsG0380012781.01.T02:CDS 45.0%
TTTCAGTGTGGCTCCAATGA+TGG - Chr3:24444038-24444057 MsG0380012781.01.T02:CDS 45.0%
! ACAGCCCTTGGCATATTTTG+GGG - Chr3:24449550-24449569 MsG0380012781.01.T02:intron 45.0%
! CAACAGCCCTTGGCATATTT+TGG - Chr3:24449548-24449567 MsG0380012781.01.T02:intron 45.0%
! CAACGGCACTTATCAGGTTT+TGG - Chr3:24451191-24451210 MsG0380012781.01.T02:intron 45.0%
! CATCAAGTCTTTGGTTCCAC+AGG + Chr3:24450674-24450693 None:intergenic 45.0%
! CCTTCATTGATGACTTCTCG+AGG + Chr3:24450564-24450583 None:intergenic 45.0%
! GGAATACTCCGATTTTCAGC+AGG + Chr3:24445719-24445738 None:intergenic 45.0%
! TGTTTGCTGCAGCCTTTACT+TGG - Chr3:24451757-24451776 MsG0380012781.01.T02:intron 45.0%
!! ACAAGGAAAGTTTGTTGCGG+AGG - Chr3:24444859-24444878 MsG0380012781.01.T02:intron 45.0%
!! ACCAAGCTTGCTGATGCTTA+CGG - Chr3:24444556-24444575 MsG0380012781.01.T02:intron 45.0%
!! GGGAGTGCTTGAATGAGATT+GGG - Chr3:24446664-24446683 MsG0380012781.01.T02:intron 45.0%
!! TATTGGTCTTACACGTCGTC+AGG - Chr3:24449605-24449624 MsG0380012781.01.T02:intron 45.0%
!! TCAAGAAAGGCACTGCTGAA+GGG - Chr3:24445686-24445705 MsG0380012781.01.T02:intron 45.0%
!! TGAATTTGGCTCTGAAGGGA+TGG - Chr3:24445039-24445058 MsG0380012781.01.T02:intron 45.0%
!!! GGTTTTTTCCATTCTGAGCC+TGG - Chr3:24451778-24451797 MsG0380012781.01.T02:intron 45.0%
!! AAAAAAAAAAAAAAATAATG+GGG - Chr3:24452361-24452380 MsG0380012781.01.T02:intron 5.0%
!! TATAAAAATCAAAATTTATT+GGG + Chr3:24445757-24445776 None:intergenic 5.0%
AAGGCCACCTATCACATCAC+TGG + Chr3:24450602-24450621 None:intergenic 50.0%
ACCAGTGCAGGAATTACCTG+TGG - Chr3:24450655-24450674 MsG0380012781.01.T02:intron 50.0%
ACTGTGACAGACCAAGGTAG+AGG - Chr3:24450919-24450938 MsG0380012781.01.T02:intron 50.0%
AGCGTCTTGTACTATGACGG+AGG - Chr3:24445380-24445399 MsG0380012781.01.T02:intron 50.0%
AGCTCACAGCTATAGAGGAC+TGG + Chr3:24448132-24448151 None:intergenic 50.0%
AGGGGGTTAGAAGAGAGAGA+AGG - Chr3:24448011-24448030 MsG0380012781.01.T02:intron 50.0%
CAACACCAGCTAATCGAGGA+GGG - Chr3:24450794-24450813 MsG0380012781.01.T02:intron 50.0%
CCGTCTCTTGTTCTGTATGG+TGG + Chr3:24453082-24453101 None:intergenic 50.0%
CTTGCCACAAACCCCAACTA+AGG - Chr3:24445088-24445107 MsG0380012781.01.T02:intron 50.0%
GAAGGAGAGTCTGATGGAGA+AGG - Chr3:24448029-24448048 MsG0380012781.01.T02:intron 50.0%
GACGAATCCAAGACTGAGTC+TGG + Chr3:24452998-24453017 None:intergenic 50.0%
GAGAGAGAAGGAGAGTCTGA+TGG - Chr3:24448023-24448042 MsG0380012781.01.T02:intron 50.0%
GCAAACTCCCAGCAAAAACG+TGG + Chr3:24446699-24446718 None:intergenic 50.0%
GCTCTATACGGAGATGCTTG+CGG - Chr3:24444116-24444135 MsG0380012781.01.T02:CDS 50.0%
GGGTTCAAAACCCTCAGGAA+CGG + Chr3:24452436-24452455 None:intergenic 50.0%
GTACAGGGTTCAAAACCCTC+AGG + Chr3:24452441-24452460 None:intergenic 50.0%
GTCTTACACGTCGTCAGGTT+CGG - Chr3:24449610-24449629 MsG0380012781.01.T02:intron 50.0%
TCCACAGGTAATTCCTGCAC+TGG + Chr3:24450659-24450678 None:intergenic 50.0%
TCCCCGTCTCTTGTTCTGTA+TGG + Chr3:24453085-24453104 None:intergenic 50.0%
TCGAGACAACGGCACTTATC+AGG - Chr3:24451185-24451204 MsG0380012781.01.T02:intron 50.0%
TCGTTTGCGAAATCACCACC+TGG - Chr3:24453016-24453035 MsG0380012781.01.T02:CDS 50.0%
TCTACCTTGGTCTGTCACAG+TGG + Chr3:24450920-24450939 None:intergenic 50.0%
TGTGCAACACCAGCTAATCG+AGG - Chr3:24450790-24450809 MsG0380012781.01.T02:intron 50.0%
TTCCATTCTGAGCCTGGGAA+TGG - Chr3:24451784-24451803 MsG0380012781.01.T02:intron 50.0%
TTTGTGGCAAGCCTTGACCT+TGG + Chr3:24445079-24445098 None:intergenic 50.0%
! CACATGGGATGAGGTTTGCT+AGG - Chr3:24450872-24450891 MsG0380012781.01.T02:intron 50.0%
! CGTTGTTTGGTAGTAGGCCA+AGG + Chr3:24451257-24451276 None:intergenic 50.0%
! GGAGAAGGCACATGTGGTTT+AGG - Chr3:24448044-24448063 MsG0380012781.01.T02:intron 50.0%
! TCTGATGGAGAAGGCACATG+TGG - Chr3:24448038-24448057 MsG0380012781.01.T02:intron 50.0%
!! CATTTTGGTCTGTCTACGGG+TGG - Chr3:24446527-24446546 MsG0380012781.01.T02:intron 50.0%
!! CTCAAGAAAGGCACTGCTGA+AGG - Chr3:24445685-24445704 MsG0380012781.01.T02:intron 50.0%
!! GCTCTAAAGATCGGTGCTCA+TGG - Chr3:24447724-24447743 MsG0380012781.01.T02:intron 50.0%
!! GGGGAGTGCTTGAATGAGAT+TGG - Chr3:24446663-24446682 MsG0380012781.01.T02:intron 50.0%
!! GGTGCTCATGGTGTTATGCT+TGG - Chr3:24447736-24447755 MsG0380012781.01.T02:intron 50.0%
!! GTCCTGCTACTCTAGGACTA+GGG + Chr3:24444706-24444725 None:intergenic 50.0%
!! GTGTGGCTCCAATGATGGAT+TGG - Chr3:24444043-24444062 MsG0380012781.01.T02:CDS 50.0%
!! TGTGGTGTAGTGGACTCAGA+AGG - Chr3:24450751-24450770 MsG0380012781.01.T02:intron 50.0%
!! TTTGGCTCTGAAGGGATGGA+AGG - Chr3:24445043-24445062 MsG0380012781.01.T02:intron 50.0%
AAAAGATCTCCACGGCCAGG+TGG + Chr3:24453034-24453053 None:intergenic 55.0%
AACGGGGCAAAACTCAGCAC+AGG + Chr3:24452589-24452608 None:intergenic 55.0%
AGTCAGGAAAGTCGCGCAAG+AGG + Chr3:24445849-24445868 None:intergenic 55.0%
AGTCCTAGAGTAGCAGGACG+TGG - Chr3:24444707-24444726 MsG0380012781.01.T02:intron 55.0%
CATCCACGTCCTGCTACTCT+AGG + Chr3:24444713-24444732 None:intergenic 55.0%
CGCTTCCAAAGTCCATTCCC+AGG + Chr3:24451799-24451818 None:intergenic 55.0%
CTTGAAGCGTGGACACAGAC+AGG - Chr3:24447286-24447305 MsG0380012781.01.T02:intron 55.0%
GAATAAACGGCCGTGGTCAG+TGG + Chr3:24445429-24445448 None:intergenic 55.0%
GCAAAAAGATCTCCACGGCC+AGG + Chr3:24453037-24453056 None:intergenic 55.0%
GCAACACCAGCTAATCGAGG+AGG - Chr3:24450793-24450812 MsG0380012781.01.T02:intron 55.0%
GCCGTAAGCATCAGCAAGCT+TGG + Chr3:24444560-24444579 None:intergenic 55.0%
GGCAAGCCTTGACCTTGGAA+TGG + Chr3:24445074-24445093 None:intergenic 55.0%
GGGCTTGGGCGTAATAAGGT+TGG - Chr3:24445559-24445578 MsG0380012781.01.T02:intron 55.0%
GGTGTGAGAAAGACCAGTGC+AGG - Chr3:24450643-24450662 MsG0380012781.01.T02:intron 55.0%
GTAGCAGGACGTGGATGCTT+TGG - Chr3:24444716-24444735 MsG0380012781.01.T02:intron 55.0%
GTCACAGTGGCGAACATGGT+TGG + Chr3:24450907-24450926 None:intergenic 55.0%
GTCCATTCCCAGGCTCAGAA+TGG + Chr3:24451789-24451808 None:intergenic 55.0%
GTCTGTCACAGTGGCGAACA+TGG + Chr3:24450911-24450930 None:intergenic 55.0%
TGACTACAGGCCACTGACCA+CGG - Chr3:24445416-24445435 MsG0380012781.01.T02:intron 55.0%
TGCCCTAGTCCTAGAGTAGC+AGG - Chr3:24444701-24444720 MsG0380012781.01.T02:intron 55.0%
TTCGCCACTGTGACAGACCA+AGG - Chr3:24450913-24450932 MsG0380012781.01.T02:intron 55.0%
! CTGAGCCTGGGAATGGACTT+TGG - Chr3:24451791-24451810 MsG0380012781.01.T02:intron 55.0%
!! CGTCCTGCTACTCTAGGACT+AGG + Chr3:24444707-24444726 None:intergenic 55.0%
!!! GCGGTGAGCTAGTCTTTTCC+TGG - Chr3:24450087-24450106 MsG0380012781.01.T02:intron 55.0%
ATCGAGGAGGGTGACCGTTC+AGG - Chr3:24450806-24450825 MsG0380012781.01.T02:intron 60.0%
GGTCACCCTCCTCGATTAGC+TGG + Chr3:24450802-24450821 None:intergenic 60.0%
TCGAGGAGGGTGACCGTTCA+GGG - Chr3:24450807-24450826 MsG0380012781.01.T02:intron 60.0%
! GTGGACTCAGAAGGAGCACG+CGG - Chr3:24450760-24450779 MsG0380012781.01.T02:intron 60.0%
GCGAAATCACCACCTGGCCG+TGG - Chr3:24453022-24453041 MsG0380012781.01.T02:CDS 65.0%
! CTCAGAAGGAGCACGCGGAG+TGG - Chr3:24450765-24450784 MsG0380012781.01.T02:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 24444018 24453114 24444018 ID=MsG0380012781.01;Name=MsG0380012781.01
Chr3 mRNA 24444018 24453114 24444018 ID=MsG0380012781.01.T01;Parent=MsG0380012781.01;Name=MsG0380012781.01.T01;_AED=0.49;_eAED=0.50;_QI=0|1|0.91|1|0.90|0.83|12|0|369
Chr3 CDS 24452962 24453114 24452962 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24452533 24452660 24452533 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24452369 24452438 24452369 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24452161 24452263 24452161 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24451385 24451502 24451385 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24451223 24451304 24451223 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24449356 24449417 24449356 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24447506 24447578 24447506 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24447304 24447384 24447304 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24445283 24445363 24445283 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 CDS 24444018 24444176 24444018 ID=MsG0380012781.01.T01:cds;Parent=MsG0380012781.01.T01
Chr3 mRNA 24444018 24453114 24444018 ID=MsG0380012781.01.T02;Parent=MsG0380012781.01;Name=MsG0380012781.01.T02;_AED=0.49;_eAED=0.50;_QI=0|1|0.90|1|1|1|11|0|369
Chr3 CDS 24452962 24453114 24452962 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24452533 24452660 24452533 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24452369 24452438 24452369 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24452161 24452263 24452161 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24451385 24451502 24451385 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24451223 24451304 24451223 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24449356 24449417 24449356 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24447506 24447578 24447506 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24447304 24447384 24447304 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24445283 24445363 24445283 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Chr3 CDS 24444018 24444176 24444018 ID=MsG0380012781.01.T02:cds;Parent=MsG0380012781.01.T02
Gene Sequence

>MsG0380012781.01.T02

ATGGTTTGTTGTTGCGTGGATTTCAGTGTGGCTCCAATGATGGATTGGACAGATAATCATTATAGAACTCTTGCACGTCTCATATCAAAACATGCTTGGCTCTATACGGAGATGCTTGCGGCTGAAACAATTGTTTATCAAAAGGGTAATCTGGACAGATTCTTGGCATATCCTCCAGATCAACATCCTATTGTGCTTCAAATTGGAGGCAGTAATTTAGAGAATTTGGCGAAAGCAACCAAGCTTGCTGATGCTTACGGCTATGATGAGATCAACTTCAATTGTGGTTGCCCTAGTCCTAGAGTAGCAGGACGTGGATGCTTTGGTGCACGTCTTATGCTTGAACCAAAGTTTGTTGCGGAGGCTGTTTCAGTGATTGCTGCCAATACAAATGTACCTGTCAGTGTCAAATGTCGAATCGGTGTGGATGATCATGATTCATACAATGAACTATGTGATTTCATTTACAAGGTCTCTTCTCTATCACCTGCTAGGCATTTCATAATTCACTCAAGAAAGGCACTGCTGAAGGGACTCAGTCCTGCTGAAAATCGGAGTATTCCTCCACTGAAATATGAATACTTTTATGGCCTCTTGCGCGACTTTCCTGACTTAACATTTACAATCAATGGTGGTATTACTTGTATTGATGAGATCAATGCAGCTCTAAAGATCGGTGCTCATGGTGTTATGCTTGGACGTGCTGCCTACCATAACCCTTGGCATATTTTGGGGAACGTTGATAGTGCAATTTATGGTGTACCAAGTATTGGTCTTACACGTCGTCAGGTCCTTGAGAAATACCAAGTATACGGAGACTCAGTGTTGCTACAATATGGATTTCGGCCAACTGTGAGAGACATTGTGAAGCCTTTACTTGGTTTTTTCCATTCTGAGCCTGGGAATGGACTTTGGAAGCGAAAAGCAGATTCTGCTGTCCAAACTTGCACGACAGTAAAATCATTTCTTGAAGAAACTCTTGTAGCAATTCCAGACTCAGTCTTGGATTCGTCGTTTGCGAAATCACCACCTGGCCGTGGAGATCTTTTTGCTAACATTGGCAGTTTATTGCCTCCACCATACAGAACAAGAGACGGGGATGCTGTGTAA

>MsG0380012781.01.T01

ATGGTTTGTTGTTGCGTGGATTTCAGTGTGGCTCCAATGATGGATTGGACAGATAATCATTATAGAACTCTTGCACGTCTCATATCAAAACATGCTTGGCTCTATACGGAGATGCTTGCGGCTGAAACAATTGTTTATCAAAAGGGTAATCTGGACAGATTCTTGGCATATCCTCCAGATCAACATCCTATTGTGCTTCAAATTGGAGGCAGTAATTTAGAGAATTTGGCGAAAGCAACCAAGCTTGCTGATGCTTACGGCTATGATGAGATCAACTTCAATTGTGGTTGCCCTAGTCCTAGAGTAGCAGGACGTGGATGCTTTGGTGCACGTCTTATGCTTGAACCAAAGTTTGTTGCGGAGGCTGTTTCAGTGATTGCTGCCAATACAAATGTACCTGTCAGTGTCAAATGTCGAATCGGTGTGGATGATCATGATTCATACAATGAACTATGTGATTTCATTTACAAGGTCTCTTCTCTATCACCTGCTAGGCATTTCATAATTCACTCAAGAAAGGCACTGCTGAAGGGACTCAGTCCTGCTGAAAATCGGAGTATTCCTCCACTGAAATATGAATACTTTTATGGCCTCTTGCGCGACTTTCCTGACTTAACATTTACAATCAATGGTGGTATTACTTGTATTGATGAGATCAATGCAGCTCTAAAGATCGGTGCTCATGGTGTTATGCTTGGACGTGCTGCCTACCATAACCCTTGGCATATTTTGGGGAACGTTGATAGTGCAATTTATGGTGTACCAAGTATTGGTCTTACACGTCGTCAGGTCCTTGAGAAATACCAAGTATACGGAGACTCAGTGTTGCTACAATATGGATTTCGGCCAACTGTGAGAGACATTGTGAAGCCTTTACTTGGTTTTTTCCATTCTGAGCCTGGGAATGGACTTTGGAAGCGAAAAGCAGATTCTGCTGTCCAAACTTGCACGACAGTAAAATCATTTCTTGAAGAAACTCTTGTAGCAATTCCAGACTCAGTCTTGGATTCGTCGTTTGCGAAATCACCACCTGGCCGTGGAGATCTTTTTGCTAACATTGGCAGTTTATTGCCTCCACCATACAGAACAAGAGACGGGGATGCTGTGTAA
Protein sequence

>MsG0380012781.01.T02

MVCCCVDFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYPPDQHPIVLQIGGSNLENLAKATKLADAYGYDEINFNCGCPSPRVAGRGCFGARLMLEPKFVAEAVSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGLSPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITCIDEINAALKIGAHGVMLGRAAYHNPWHILGNVDSAIYGVPSIGLTRRQVLEKYQVYGDSVLLQYGFRPTVRDIVKPLLGFFHSEPGNGLWKRKADSAVQTCTTVKSFLEETLVAIPDSVLDSSFAKSPPGRGDLFANIGSLLPPPYRTRDGDAV*

>MsG0380012781.01.T01

MVCCCVDFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYPPDQHPIVLQIGGSNLENLAKATKLADAYGYDEINFNCGCPSPRVAGRGCFGARLMLEPKFVAEAVSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGLSPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITCIDEINAALKIGAHGVMLGRAAYHNPWHILGNVDSAIYGVPSIGLTRRQVLEKYQVYGDSVLLQYGFRPTVRDIVKPLLGFFHSEPGNGLWKRKADSAVQTCTTVKSFLEETLVAIPDSVLDSSFAKSPPGRGDLFANIGSLLPPPYRTRDGDAV*