Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018022.01.T01 | ACJ85376.1 | 79.787 | 188 | 5 | 1 | 1 | 188 | 1 | 155 | 1.69E-88 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018022.01.T01 | B7FKU2 | 79.787 | 188 | 5 | 1 | 1 | 188 | 1 | 155 | 8.07e-89 | 269 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0380018022.01 | 0.810242 | 1.270679e-50 | 7.619956e-48 |
| MsG0080048683.01 | MsG0380018022.01 | 0.800258 | 1.568370e-48 | 7.269397e-46 |
| MsG0080048784.01 | MsG0380018022.01 | 0.801921 | 7.165612e-49 | 3.464135e-46 |
| MsG0080048849.01 | MsG0380018022.01 | 0.801982 | 6.963488e-49 | 3.371502e-46 |
| MsG0080049011.01 | MsG0380018022.01 | 0.813823 | 2.105610e-51 | 1.389483e-48 |
| MsG0080049147.01 | MsG0380018022.01 | 0.816473 | 5.432354e-52 | 3.852797e-49 |
| MsG0180000355.01 | MsG0380018022.01 | 0.803881 | 2.820790e-49 | 1.433805e-46 |
| MsG0180000568.01 | MsG0380018022.01 | 0.813066 | 3.089381e-51 | 1.997102e-48 |
| MsG0180000611.01 | MsG0380018022.01 | 0.825757 | 3.939277e-54 | 3.623370e-51 |
| MsG0180002547.01 | MsG0380018022.01 | 0.807816 | 4.202294e-50 | 2.363701e-47 |
| MsG0180002794.01 | MsG0380018022.01 | 0.809952 | 1.466973e-50 | 8.731095e-48 |
| MsG0180002955.01 | MsG0380018022.01 | 0.808062 | 3.724114e-50 | 2.108361e-47 |
| MsG0180003189.01 | MsG0380018022.01 | 0.840762 | 7.152039e-58 | 1.029053e-54 |
| MsG0180003357.01 | MsG0380018022.01 | 0.838944 | 2.127557e-57 | 2.893820e-54 |
| MsG0180003379.01 | MsG0380018022.01 | 0.818495 | 1.903065e-52 | 1.426755e-49 |
| MsG0180003821.01 | MsG0380018022.01 | 0.840281 | 9.558563e-58 | 1.354867e-54 |
| MsG0180003885.01 | MsG0380018022.01 | 0.803801 | 2.931664e-49 | 1.487019e-46 |
| MsG0180004016.01 | MsG0380018022.01 | 0.805496 | 1.298163e-49 | 6.878025e-47 |
| MsG0180004025.01 | MsG0380018022.01 | 0.811200 | 7.883970e-51 | 4.849728e-48 |
| MsG0180004500.01 | MsG0380018022.01 | 0.807539 | 4.811830e-50 | 2.687116e-47 |
| MsG0180004684.01 | MsG0380018022.01 | 0.807274 | 5.475754e-50 | 3.036999e-47 |
| MsG0180004725.01 | MsG0380018022.01 | 0.831699 | 1.439729e-55 | 1.574606e-52 |
| MsG0180005106.01 | MsG0380018022.01 | 0.811537 | 6.661377e-51 | 4.134314e-48 |
| MsG0180005169.01 | MsG0380018022.01 | 0.814651 | 1.382343e-51 | 9.328794e-49 |
| MsG0180005205.01 | MsG0380018022.01 | 0.800526 | 1.382947e-48 | 6.453668e-46 |
| MsG0180005268.01 | MsG0380018022.01 | 0.815496 | 8.974531e-52 | 6.197630e-49 |
| MsG0180005397.01 | MsG0380018022.01 | 0.815454 | 9.167707e-52 | 6.323704e-49 |
| MsG0180005509.01 | MsG0380018022.01 | 0.826343 | 2.857176e-54 | 2.672342e-51 |
| MsG0180005787.01 | MsG0380018022.01 | 0.861724 | 8.388632e-64 | 2.395912e-60 |
| MsG0180005913.01 | MsG0380018022.01 | 0.843932 | 1.033681e-58 | 1.642732e-55 |
| MsG0180005990.01 | MsG0380018022.01 | 0.801293 | 9.643031e-49 | 4.588374e-46 |
| MsG0180006096.01 | MsG0380018022.01 | 0.883037 | 6.294003e-71 | 3.925682e-67 |
| MsG0180006104.01 | MsG0380018022.01 | 0.822245 | 2.625865e-53 | 2.185764e-50 |
| MsG0280010595.01 | MsG0380018022.01 | 0.813416 | 2.587586e-51 | 1.688833e-48 |
| MsG0280010599.01 | MsG0380018022.01 | 0.800465 | 1.423293e-48 | 6.631505e-46 |
| MsG0280010776.01 | MsG0380018022.01 | 0.808104 | 3.648633e-50 | 2.067920e-47 |
| MsG0280011073.01 | MsG0380018022.01 | 0.812330 | 4.477103e-51 | 2.838449e-48 |
| MsG0280011287.01 | MsG0380018022.01 | 0.819447 | 1.156198e-52 | 8.899443e-50 |
| MsG0280011333.01 | MsG0380018022.01 | 0.802533 | 5.362075e-49 | 2.632939e-46 |
| MsG0280011371.01 | MsG0380018022.01 | 0.872702 | 2.596587e-67 | 1.097269e-63 |
| MsG0380011669.01 | MsG0380018022.01 | 0.841196 | 5.501905e-58 | 8.023240e-55 |
| MsG0380011704.01 | MsG0380018022.01 | 0.852790 | 3.662801e-61 | 7.742667e-58 |
| MsG0380011747.01 | MsG0380018022.01 | 0.809832 | 1.556690e-50 | 9.236010e-48 |
| MsG0380011927.01 | MsG0380018022.01 | 0.807195 | 5.692164e-50 | 3.150448e-47 |
| MsG0380012005.01 | MsG0380018022.01 | 0.824980 | 6.015609e-54 | 5.412420e-51 |
| MsG0380012374.01 | MsG0380018022.01 | 0.808137 | 3.590873e-50 | 2.036978e-47 |
| MsG0380012394.01 | MsG0380018022.01 | 0.813121 | 3.005178e-51 | 1.945476e-48 |
| MsG0380012781.01 | MsG0380018022.01 | 0.804044 | 2.609748e-49 | 1.332047e-46 |
| MsG0380013085.01 | MsG0380018022.01 | 0.807623 | 4.617716e-50 | 2.584349e-47 |
| MsG0380013853.01 | MsG0380018022.01 | 0.847439 | 1.155963e-59 | 2.054680e-56 |
| MsG0380014727.01 | MsG0380018022.01 | 0.815195 | 1.046993e-51 | 7.170043e-49 |
| MsG0380015166.01 | MsG0380018022.01 | 0.813513 | 2.464560e-51 | 1.612775e-48 |
| MsG0380015220.01 | MsG0380018022.01 | 0.840809 | 6.951104e-58 | 1.001643e-54 |
| MsG0380016117.01 | MsG0380018022.01 | 0.809901 | 1.504448e-50 | 8.942070e-48 |
| MsG0380016566.01 | MsG0380018022.01 | 0.804629 | 1.970599e-49 | 1.021035e-46 |
| MsG0380016740.01 | MsG0380018022.01 | 0.866234 | 3.308532e-65 | 1.107047e-61 |
| MsG0380017022.01 | MsG0380018022.01 | 0.800048 | 1.729967e-48 | 7.975806e-46 |
| MsG0380017023.01 | MsG0380018022.01 | 0.828270 | 9.868281e-55 | 9.760493e-52 |
| MsG0380017085.01 | MsG0380018022.01 | 0.834718 | 2.549341e-56 | 3.050308e-53 |
| MsG0380017126.01 | MsG0380018022.01 | 0.817532 | 3.140005e-52 | 2.292613e-49 |
| MsG0380017198.01 | MsG0380018022.01 | 0.802574 | 5.259830e-49 | 2.585380e-46 |
| MsG0380017279.01 | MsG0380018022.01 | 0.818278 | 2.130721e-52 | 1.587816e-49 |
| MsG0380017322.01 | MsG0380018022.01 | 0.811314 | 7.446928e-51 | 4.594410e-48 |
| MsG0380017512.01 | MsG0380018022.01 | 0.805720 | 1.164884e-49 | 6.207991e-47 |
| MsG0380017931.01 | MsG0380018022.01 | 0.805447 | 1.329095e-49 | 7.033235e-47 |
| MsG0380018022.01 | MsG0380018044.01 | 0.813822 | 2.106955e-51 | 1.390315e-48 |
| MsG0380018022.01 | MsG0480018402.01 | 0.804328 | 2.276960e-49 | 1.170691e-46 |
| MsG0380018022.01 | MsG0480018473.01 | 0.800925 | 1.146406e-48 | 5.404562e-46 |
| MsG0380018022.01 | MsG0480018847.01 | 0.815056 | 1.123808e-51 | 7.667322e-49 |
| MsG0380018022.01 | MsG0480018911.01 | 0.838919 | 2.160357e-57 | 2.936148e-54 |
| MsG0380018022.01 | MsG0480019408.01 | 0.817572 | 3.075565e-52 | 2.247988e-49 |
| MsG0380018022.01 | MsG0480020024.01 | 0.851130 | 1.084364e-60 | 2.173010e-57 |
| MsG0380018022.01 | MsG0480021041.01 | 0.807440 | 5.048760e-50 | 2.812236e-47 |
| MsG0380018022.01 | MsG0480021190.01 | 0.801589 | 8.384894e-49 | 4.019446e-46 |
| MsG0380018022.01 | MsG0480021492.01 | 0.816279 | 6.003319e-52 | 4.235556e-49 |
| MsG0380018022.01 | MsG0480021706.01 | 0.804377 | 2.223935e-49 | 1.144883e-46 |
| MsG0380018022.01 | MsG0480021768.01 | 0.801846 | 7.427030e-49 | 3.583745e-46 |
| MsG0380018022.01 | MsG0480021986.01 | 0.803125 | 4.046091e-49 | 2.016924e-46 |
| MsG0380018022.01 | MsG0480022292.01 | 0.801177 | 1.018235e-48 | 4.830845e-46 |
| MsG0380018022.01 | MsG0480022493.01 | 0.803950 | 2.728825e-49 | 1.389556e-46 |
| MsG0380018022.01 | MsG0480022672.01 | 0.825787 | 3.874757e-54 | 3.567228e-51 |
| MsG0380018022.01 | MsG0480023055.01 | 0.808818 | 2.569621e-50 | 1.483877e-47 |
| MsG0380018022.01 | MsG0480023073.01 | 0.804661 | 1.940705e-49 | 1.006417e-46 |
| MsG0380018022.01 | MsG0480023143.01 | 0.806884 | 6.623274e-50 | 3.636320e-47 |
| MsG0380018022.01 | MsG0480023162.01 | 0.802055 | 6.726065e-49 | 3.262822e-46 |
| MsG0380018022.01 | MsG0480023384.01 | 0.837135 | 6.215578e-57 | 7.998684e-54 |
| MsG0380018022.01 | MsG0480023387.01 | 0.809978 | 1.448236e-50 | 8.625461e-48 |
| MsG0380018022.01 | MsG0480023638.01 | 0.827767 | 1.304477e-54 | 1.271384e-51 |
| MsG0380018022.01 | MsG0480023652.01 | 0.824662 | 7.147257e-54 | 6.372715e-51 |
| MsG0380018022.01 | MsG0480023776.01 | 0.810483 | 1.126885e-50 | 6.800860e-48 |
| MsG0380018022.01 | MsG0480023867.01 | 0.842689 | 2.218035e-58 | 3.389373e-55 |
| MsG0380018022.01 | MsG0580024084.01 | 0.823240 | 1.540568e-53 | 1.319065e-50 |
| MsG0380018022.01 | MsG0580024495.01 | 0.831020 | 2.114899e-55 | 2.266727e-52 |
| MsG0380018022.01 | MsG0580024775.01 | 0.802219 | 6.224967e-49 | 3.032236e-46 |
| MsG0380018022.01 | MsG0580024829.01 | 0.824098 | 9.704285e-54 | 8.512458e-51 |
| MsG0380018022.01 | MsG0580024830.01 | 0.812675 | 3.762824e-51 | 2.407454e-48 |
| MsG0380018022.01 | MsG0580024935.01 | 0.810933 | 9.009582e-51 | 5.503540e-48 |
| MsG0380018022.01 | MsG0580025458.01 | 0.801981 | 6.966975e-49 | 3.373083e-46 |
| MsG0380018022.01 | MsG0580025460.01 | 0.809716 | 1.648793e-50 | 9.752747e-48 |
| MsG0380018022.01 | MsG0580026032.01 | 0.801343 | 9.415038e-49 | 4.485568e-46 |
| MsG0380018022.01 | MsG0580026137.01 | 0.819342 | 1.221530e-52 | 9.373852e-50 |
| MsG0380018022.01 | MsG0580026439.01 | 0.827274 | 1.712296e-54 | 1.645267e-51 |
| MsG0380018022.01 | MsG0580027034.01 | 0.802272 | 6.070850e-49 | 2.961240e-46 |
| MsG0380018022.01 | MsG0580027124.01 | 0.808141 | 3.582649e-50 | 2.032595e-47 |
| MsG0380018022.01 | MsG0580027891.01 | 0.828785 | 7.411525e-55 | 7.441018e-52 |
| MsG0380018022.01 | MsG0580028175.01 | 0.801574 | 8.443886e-49 | 4.046351e-46 |
| MsG0380018022.01 | MsG0580028582.01 | 0.832438 | 9.454652e-56 | 1.056758e-52 |
| MsG0380018022.01 | MsG0580029283.01 | 0.804312 | 2.294911e-49 | 1.179421e-46 |
| MsG0380018022.01 | MsG0580029376.01 | 0.809516 | 1.820643e-50 | 1.071161e-47 |
| MsG0380018022.01 | MsG0580029514.01 | -0.800730 | 1.256599e-48 | 5.894476e-46 |
| MsG0380018022.01 | MsG0580029647.01 | 0.817051 | 4.029699e-52 | 2.903776e-49 |
| MsG0380018022.01 | MsG0580029717.01 | 0.817573 | 3.075094e-52 | 2.247663e-49 |
| MsG0380018022.01 | MsG0580029879.01 | 0.836766 | 7.721747e-57 | 9.827737e-54 |
| MsG0380018022.01 | MsG0580029919.01 | 0.817600 | 3.031106e-52 | 2.217185e-49 |
| MsG0380018022.01 | MsG0580030142.01 | 0.841575 | 4.371654e-58 | 6.451087e-55 |
| MsG0380018022.01 | MsG0680030515.01 | 0.820985 | 5.135552e-53 | 4.126146e-50 |
| MsG0380018022.01 | MsG0680030555.01 | 0.816249 | 6.094616e-52 | 4.296425e-49 |
| MsG0380018022.01 | MsG0680030636.01 | 0.823486 | 1.349871e-53 | 1.163853e-50 |
| MsG0380018022.01 | MsG0680031000.01 | 0.853386 | 2.473210e-61 | 5.334608e-58 |
| MsG0380018022.01 | MsG0680031334.01 | 0.816659 | 4.933248e-52 | 3.516926e-49 |
| MsG0380018022.01 | MsG0680031468.01 | 0.819718 | 1.002353e-52 | 7.774113e-50 |
| MsG0380018022.01 | MsG0680031561.01 | 0.800494 | 1.403532e-48 | 6.544550e-46 |
| MsG0380018022.01 | MsG0680031939.01 | 0.814927 | 1.200532e-51 | 8.161995e-49 |
| MsG0380018022.01 | MsG0680033459.01 | 0.825275 | 5.122516e-54 | 4.647574e-51 |
| MsG0380018022.01 | MsG0680033926.01 | 0.809251 | 2.075242e-50 | 1.212416e-47 |
| MsG0380018022.01 | MsG0680034235.01 | 0.848205 | 7.108171e-60 | 1.294531e-56 |
| MsG0380018022.01 | MsG0680034476.01 | 0.802768 | 4.796817e-49 | 2.369619e-46 |
| MsG0380018022.01 | MsG0680034913.01 | 0.808849 | 2.529785e-50 | 1.462105e-47 |
| MsG0380018022.01 | MsG0680035765.01 | 0.808067 | 3.714929e-50 | 2.103454e-47 |
| MsG0380018022.01 | MsG0680035877.01 | 0.826981 | 2.012963e-54 | 1.917545e-51 |
| MsG0380018022.01 | MsG0780035937.01 | 0.852448 | 4.585165e-61 | 9.583800e-58 |
| MsG0380018022.01 | MsG0780036117.01 | 0.848224 | 7.021903e-60 | 1.279650e-56 |
| MsG0380018022.01 | MsG0780036183.01 | 0.836084 | 1.151051e-56 | 1.435286e-53 |
| MsG0380018022.01 | MsG0780036659.01 | 0.816740 | 4.733228e-52 | 3.381636e-49 |
| MsG0380018022.01 | MsG0780036800.01 | 0.802316 | 5.943787e-49 | 2.902756e-46 |
| MsG0380018022.01 | MsG0780036880.01 | 0.808683 | 2.745005e-50 | 1.579547e-47 |
| MsG0380018022.01 | MsG0780037330.01 | 0.843178 | 1.643403e-58 | 2.549969e-55 |
| MsG0380018022.01 | MsG0780039439.01 | 0.808886 | 2.484224e-50 | 1.437130e-47 |
| MsG0380018022.01 | MsG0780040375.01 | -0.800980 | 1.117109e-48 | 5.273966e-46 |
| MsG0380018022.01 | MsG0780040734.01 | 0.825030 | 5.854859e-54 | 5.275316e-51 |
| MsG0380018022.01 | MsG0780041187.01 | 0.802460 | 5.550582e-49 | 2.720517e-46 |
| MsG0380018022.01 | MsG0780041210.01 | 0.829045 | 6.411160e-55 | 6.485693e-52 |
| MsG0380018022.01 | MsG0780041387.01 | 0.823097 | 1.664141e-53 | 1.419192e-50 |
| MsG0380018022.01 | MsG0780041435.01 | 0.834924 | 2.261689e-56 | 2.723456e-53 |
| MsG0380018022.01 | MsG0780041729.01 | -0.856402 | 3.296929e-62 | 7.859867e-59 |
| MsG0380018022.01 | MsG0780041747.01 | 0.830120 | 3.512172e-55 | 3.666425e-52 |
| MsG0380018022.01 | MsG0880042033.01 | 0.826930 | 2.069570e-54 | 1.968658e-51 |
| MsG0380018022.01 | MsG0880042134.01 | 0.824484 | 7.872973e-54 | 6.982667e-51 |
| MsG0380018022.01 | MsG0880042324.01 | 0.802363 | 5.812621e-49 | 2.842051e-46 |
| MsG0380018022.01 | MsG0880042622.01 | 0.840930 | 6.463094e-58 | 9.347553e-55 |
| MsG0380018022.01 | MsG0880042700.01 | 0.819248 | 1.283035e-52 | 9.821314e-50 |
| MsG0380018022.01 | MsG0880042857.01 | 0.804277 | 2.334051e-49 | 1.198445e-46 |
| MsG0380018022.01 | MsG0880043162.01 | 0.807136 | 5.858377e-50 | 3.237348e-47 |
| MsG0380018022.01 | MsG0880043867.01 | 0.829127 | 6.125241e-55 | 6.212035e-52 |
| MsG0380018022.01 | MsG0880044145.01 | 0.803682 | 3.102359e-49 | 1.568782e-46 |
| MsG0380018022.01 | MsG0880045329.01 | 0.813593 | 2.366583e-51 | 1.552030e-48 |
| MsG0380018022.01 | MsG0880045371.01 | 0.800089 | 1.697337e-48 | 7.833498e-46 |
| MsG0380018022.01 | MsG0880045387.01 | 0.837181 | 6.047347e-57 | 7.793492e-54 |
| MsG0380018022.01 | MsG0880045460.01 | 0.809468 | 1.864733e-50 | 1.095695e-47 |
| MsG0380018022.01 | MsG0880045684.01 | 0.828278 | 9.825229e-55 | 9.720345e-52 |
| MsG0380018022.01 | MsG0880045765.01 | 0.808996 | 2.353197e-50 | 1.365373e-47 |
| MsG0380018022.01 | MsG0880046517.01 | 0.830355 | 3.077308e-55 | 3.234509e-52 |
| MsG0380018022.01 | MsG0880047052.01 | 0.806899 | 6.575498e-50 | 3.611431e-47 |
| MsG0380018022.01 | MsG0880047696.01 | 0.840962 | 6.339733e-58 | 9.178021e-55 |
| MsG0380018022.01 | MsG0880047703.01 | 0.807784 | 4.268024e-50 | 2.398705e-47 |
| MsG0380018022.01 | MsG0880047763.01 | 0.818661 | 1.744704e-52 | 1.313979e-49 |
| MsG0280006634.01 | MsG0380018022.01 | 0.804057 | 2.592492e-49 | 1.323755e-46 |
| MsG0280006669.01 | MsG0380018022.01 | 0.808235 | 3.421523e-50 | 1.945988e-47 |
| MsG0280006679.01 | MsG0380018022.01 | 0.803859 | 2.850585e-49 | 1.448113e-46 |
| MsG0280006852.01 | MsG0380018022.01 | 0.834488 | 2.911024e-56 | 3.459913e-53 |
| MsG0280007531.01 | MsG0380018022.01 | 0.818624 | 1.779123e-52 | 1.338512e-49 |
| MsG0280007575.01 | MsG0380018022.01 | 0.809064 | 2.275336e-50 | 1.322665e-47 |
| MsG0280007714.01 | MsG0380018022.01 | 0.811720 | 6.079860e-51 | 3.791554e-48 |
| MsG0280007847.01 | MsG0380018022.01 | 0.800804 | 1.213474e-48 | 5.702882e-46 |
| MsG0280007903.01 | MsG0380018022.01 | 0.803656 | 3.141815e-49 | 1.587638e-46 |
| MsG0280008113.01 | MsG0380018022.01 | 0.806899 | 6.574719e-50 | 3.611024e-47 |
| MsG0280008429.01 | MsG0380018022.01 | 0.808481 | 3.032760e-50 | 1.736062e-47 |
| MsG0280008738.01 | MsG0380018022.01 | 0.816566 | 5.175748e-52 | 3.680314e-49 |
| MsG0280008765.01 | MsG0380018022.01 | 0.825983 | 3.480105e-54 | 3.221813e-51 |
| MsG0280008928.01 | MsG0380018022.01 | 0.802867 | 4.575166e-49 | 2.265804e-46 |
| MsG0280008929.01 | MsG0380018022.01 | 0.838761 | 2.373827e-57 | 3.210985e-54 |
| MsG0280009256.01 | MsG0380018022.01 | 0.803183 | 3.937059e-49 | 1.965537e-46 |
| MsG0280009441.01 | MsG0380018022.01 | 0.808382 | 3.183567e-50 | 1.817681e-47 |
| MsG0280009554.01 | MsG0380018022.01 | 0.824293 | 8.731092e-54 | 7.700978e-51 |
| MsG0280009575.01 | MsG0380018022.01 | 0.834800 | 2.431245e-56 | 2.916340e-53 |
| MsG0280009598.01 | MsG0380018022.01 | 0.800732 | 1.255261e-48 | 5.888560e-46 |
| MsG0280009685.01 | MsG0380018022.01 | 0.826103 | 3.259911e-54 | 3.028127e-51 |
| MsG0280010013.01 | MsG0380018022.01 | 0.811392 | 7.164857e-51 | 4.429662e-48 |
| MsG0280010158.01 | MsG0380018022.01 | 0.815516 | 8.882323e-52 | 6.137326e-49 |
| MsG0280010184.01 | MsG0380018022.01 | 0.812224 | 4.720133e-51 | 2.984099e-48 |
| MsG0280010205.01 | MsG0380018022.01 | 0.819432 | 1.164848e-52 | 8.962453e-50 |
| MsG0280010216.01 | MsG0380018022.01 | 0.819049 | 1.424079e-52 | 1.084156e-49 |
| MsG0280010288.01 | MsG0380018022.01 | 0.831140 | 1.976551e-55 | 2.125951e-52 |
| MsG0280010411.01 | MsG0380018022.01 | 0.849780 | 2.596425e-60 | 4.976981e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018022.01.T01 | MTR_3g117390 | 78.947 | 190 | 5 | 2 | 1 | 188 | 1 | 157 | 2.08e-90 | 264 |
| MsG0380018022.01.T01 | MTR_8g076260 | 57.738 | 168 | 35 | 2 | 22 | 189 | 42 | 173 | 1.64e-54 | 173 |
| MsG0380018022.01.T01 | MTR_5g021410 | 57.047 | 149 | 31 | 1 | 41 | 189 | 50 | 165 | 4.54e-50 | 160 |
| MsG0380018022.01.T01 | MTR_5g021410 | 57.047 | 149 | 31 | 1 | 41 | 189 | 50 | 165 | 2.67e-49 | 160 |
| MsG0380018022.01.T01 | MTR_5g021410 | 54.015 | 137 | 30 | 1 | 41 | 177 | 50 | 153 | 2.44e-40 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018022.01.T01 | AT2G16460 | 51.269 | 197 | 53 | 3 | 1 | 189 | 1 | 162 | 2.61e-55 | 173 |
| MsG0380018022.01.T01 | AT2G16460 | 51.269 | 197 | 53 | 3 | 1 | 189 | 1 | 162 | 1.09e-54 | 173 |
| MsG0380018022.01.T01 | AT3G51090 | 53.503 | 157 | 40 | 2 | 33 | 189 | 107 | 230 | 6.24e-45 | 150 |
| MsG0380018022.01.T01 | AT3G51090 | 53.846 | 156 | 39 | 2 | 33 | 188 | 107 | 229 | 1.08e-44 | 149 |
Find 64 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGTTTCATTGTAACATTT+TGG | 0.178012 | 3:-103451105 | MsG0380018022.01.T01:three_prime_UTR |
| ATTACGGAATTAGAAGATTA+AGG | 0.184815 | 3:-103450929 | MsG0380018022.01.T01:three_prime_UTR |
| GACCCAATTGTATGGAAATT+TGG | 0.202246 | 3:+103453891 | None:intergenic |
| GCCCTCATTAAATGTTAAAA+TGG | 0.223395 | 3:-103451038 | MsG0380018022.01.T01:three_prime_UTR |
| ATGTTAAAATGGATTGTATT+TGG | 0.278994 | 3:-103451027 | MsG0380018022.01.T01:three_prime_UTR |
| AAACCAAATTTCCATACAAT+TGG | 0.300539 | 3:-103453894 | MsG0380018022.01.T01:CDS |
| ATTTAATCACAGACGCATTC+AGG | 0.308541 | 3:-103451485 | MsG0380018022.01.T01:intron |
| AATAGAAGAGATTATTATTA+CGG | 0.321721 | 3:-103450945 | MsG0380018022.01.T01:three_prime_UTR |
| GTTATCGCCTCAGCTTGTTT+TGG | 0.323748 | 3:+103454058 | None:intergenic |
| TTACGGAATTAGAAGATTAA+GGG | 0.343693 | 3:-103450928 | MsG0380018022.01.T01:three_prime_UTR |
| ATCAAGTTTGTTTGTCAGAT+TGG | 0.379537 | 3:+103451432 | None:intergenic |
| AATTCTATCTACTTTCTGAT+TGG | 0.391161 | 3:+103450988 | None:intergenic |
| ACGGCGACCCACTGCAGATA+TGG | 0.397625 | 3:+103451255 | None:intergenic |
| CTCTATCTCTCTGGATTAGA+TGG | 0.405673 | 3:-103454378 | MsG0380018022.01.T01:exon |
| AAGGAGCGCATTGTTTCAAT+TGG | 0.408136 | 3:-103451137 | MsG0380018022.01.T01:three_prime_UTR |
| AACAAGCTGAGGCGATAACT+TGG | 0.420914 | 3:-103454054 | MsG0380018022.01.T01:CDS |
| TCAAAGGTGAATTGTGGTTA+TGG | 0.425345 | 3:-103451203 | MsG0380018022.01.T01:three_prime_UTR |
| AAATGGATTGTATTTGGTTG+TGG | 0.430401 | 3:-103451021 | MsG0380018022.01.T01:three_prime_UTR |
| ACACAGAATCACAAAACTTC+TGG | 0.443265 | 3:-103451074 | MsG0380018022.01.T01:three_prime_UTR |
| AACCAAATTTCCATACAATT+GGG | 0.443796 | 3:-103453893 | MsG0380018022.01.T01:intron |
| TACGGAATTTAGAGACGAAC+GGG | 0.458143 | 3:-103454087 | MsG0380018022.01.T01:CDS |
| GTAGAAGTAGAAGTTGAAGA+AGG | 0.461871 | 3:+103454293 | None:intergenic |
| ACAATTCACCTTTGATTACA+TGG | 0.462437 | 3:+103451211 | None:intergenic |
| ATCTGAAGTCAAAACTTCTC+AGG | 0.465665 | 3:-103453918 | MsG0380018022.01.T01:CDS |
| TAGCACCAGGCATGTTTCAC+AGG | 0.468804 | 3:-103454270 | MsG0380018022.01.T01:CDS |
| GCATCAGCTCTCTATCTCTC+TGG | 0.470218 | 3:-103454387 | MsG0380018022.01.T01:five_prime_UTR |
| CATACTTTGCAGCTTCTAAC+GGG | 0.471852 | 3:+103451311 | None:intergenic |
| CACTGCAGATATGGAGATAA+GGG | 0.479719 | 3:+103451264 | None:intergenic |
| AAGCTGTTGACCCAATTGTA+TGG | 0.479996 | 3:+103453883 | None:intergenic |
| GAGATTGACAAAGTCACTGC+TGG | 0.485809 | 3:-103451636 | MsG0380018022.01.T01:CDS |
| CCACTGCAGATATGGAGATA+AGG | 0.487152 | 3:+103451263 | None:intergenic |
| TCTGACAAACAAACTTGATC+GGG | 0.498087 | 3:-103451428 | MsG0380018022.01.T01:intron |
| TAGAAGTAGAAGTTGAAGAA+GGG | 0.503217 | 3:+103454294 | None:intergenic |
| TTTAACATTTAATGAGGGCC+GGG | 0.505591 | 3:+103451042 | None:intergenic |
| TCATACTTTGCAGCTTCTAA+CGG | 0.509627 | 3:+103451310 | None:intergenic |
| TGAAGTTCTTAATGACAGCT+TGG | 0.512695 | 3:-103454023 | MsG0380018022.01.T01:CDS |
| ATCTGACAAACAAACTTGAT+CGG | 0.523172 | 3:-103451429 | MsG0380018022.01.T01:three_prime_UTR |
| AGGACGACTTAAACATCTGA+TGG | 0.527369 | 3:+103451867 | None:intergenic |
| ACTATAATAGATGCGGATCA+CGG | 0.529469 | 3:+103451236 | None:intergenic |
| AACTTCTGGTGTAGTATCCC+CGG | 0.532620 | 3:-103451060 | MsG0380018022.01.T01:three_prime_UTR |
| CCTGCATCACCATCATCAAA+AGG | 0.537578 | 3:+103451847 | None:intergenic |
| CCTTATCTCCATATCTGCAG+TGG | 0.542460 | 3:-103451263 | MsG0380018022.01.T01:three_prime_UTR |
| GAGGAATGCGCGTTTAACGT+TGG | 0.554552 | 3:+103454238 | None:intergenic |
| TGGACTTGAATCTTGAAAGA+AGG | 0.556133 | 3:-103451606 | MsG0380018022.01.T01:intron |
| TTTGGCATTTCGGAGATCAA+AGG | 0.558469 | 3:-103451156 | MsG0380018022.01.T01:three_prime_UTR |
| TTAACATTTAATGAGGGCCG+GGG | 0.568573 | 3:+103451043 | None:intergenic |
| AAGTCACTGCTGGGCAACGA+TGG | 0.570460 | 3:-103451626 | MsG0380018022.01.T01:CDS |
| GCGTTTAACGTTGGAATCGA+CGG | 0.571613 | 3:+103454247 | None:intergenic |
| TATAGTCTCCATGTAATCAA+AGG | 0.573708 | 3:-103451219 | MsG0380018022.01.T01:three_prime_UTR |
| ATAAGATGAGGACTGAATTG+AGG | 0.579482 | 3:-103451771 | MsG0380018022.01.T01:intron |
| GACGGCCTGTGAAACATGCC+TGG | 0.591005 | 3:+103454265 | None:intergenic |
| ACAAGCTGAGGCGATAACTT+GGG | 0.597291 | 3:-103454053 | MsG0380018022.01.T01:CDS |
| CTTCTACTTCTACTAGCACC+AGG | 0.598974 | 3:-103454283 | MsG0380018022.01.T01:CDS |
| CTTATCTCCATATCTGCAGT+GGG | 0.601808 | 3:-103451262 | MsG0380018022.01.T01:three_prime_UTR |
| ATGTAATCAAAGGTGAATTG+TGG | 0.603678 | 3:-103451209 | MsG0380018022.01.T01:three_prime_UTR |
| GATGTGATCAAATACTGCAT+AGG | 0.606023 | 3:-103451289 | MsG0380018022.01.T01:three_prime_UTR |
| GTACGGAATTTAGAGACGAA+CGG | 0.611233 | 3:-103454088 | MsG0380018022.01.T01:CDS |
| AGATTGACAAAGTCACTGCT+GGG | 0.625895 | 3:-103451635 | MsG0380018022.01.T01:CDS |
| GCTTCCTCCAAAACAAGCTG+AGG | 0.626434 | 3:-103454065 | MsG0380018022.01.T01:CDS |
| GTAATGACATAGATAAGATG+AGG | 0.649950 | 3:-103451783 | MsG0380018022.01.T01:CDS |
| CATGGAGACTATAATAGATG+CGG | 0.652537 | 3:+103451229 | None:intergenic |
| AGAAGGGAATAAAGAAGCGA+CGG | 0.660433 | 3:+103454310 | None:intergenic |
| CGAGTGCAAGTGTATCGACG+AGG | 0.710387 | 3:+103454219 | None:intergenic |
| AAAATGTTACAATGAAACTG+CGG | 0.727704 | 3:+103451107 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTTATAATAAGAATAT+AGG | - | Chr3:103451716-103451735 | MsG0380018022.01.T01:intron | 10.0% |
| !!! | TTTACAATTTTTTTGTTTTT+TGG | - | Chr3:103454158-103454177 | MsG0380018022.01.T01:intron | 10.0% |
| !! | AATAGAAGAGATTATTATTA+CGG | - | Chr3:103454387-103454406 | MsG0380018022.01.T01:five_prime_UTR | 15.0% |
| !! | AATATACAATAGTAAATCTT+AGG | + | Chr3:103453647-103453666 | None:intergenic | 15.0% |
| !! | AATTGAATTGAATTGAATTT+GGG | - | Chr3:103451210-103451229 | MsG0380018022.01.T01:three_prime_UTR | 15.0% |
| !! | ATAAATAAAGATGCAATATT+TGG | - | Chr3:103453249-103453268 | MsG0380018022.01.T01:intron | 15.0% |
| !! | ATAGTTTATTGAAAGTTTAT+GGG | - | Chr3:103452730-103452749 | MsG0380018022.01.T01:intron | 15.0% |
| !! | ATATACAATAGTAAATCTTA+GGG | + | Chr3:103453646-103453665 | None:intergenic | 15.0% |
| !! | GTTTATTTATATTTAAACAC+TGG | + | Chr3:103452915-103452934 | None:intergenic | 15.0% |
| !!! | AAATTTATTGGTCTTTTAAA+AGG | + | Chr3:103451671-103451690 | None:intergenic | 15.0% |
| !!! | AATTTATTGGTCTTTTAAAA+GGG | + | Chr3:103451670-103451689 | None:intergenic | 15.0% |
| !!! | TTATATTTTTGTTATTGAAG+TGG | - | Chr3:103453941-103453960 | MsG0380018022.01.T01:CDS | 15.0% |
| !! | AAAATGCAAATTAAACTGAA+AGG | + | Chr3:103452173-103452192 | None:intergenic | 20.0% |
| !! | AAATTCCTAAATGACAATTA+TGG | - | Chr3:103452277-103452296 | MsG0380018022.01.T01:intron | 20.0% |
| !! | AATTGAAACATTATCATTGT+TGG | - | Chr3:103454431-103454450 | MsG0380018022.01.T01:five_prime_UTR | 20.0% |
| !! | ATAAGATGTTGAAAAAGAAA+TGG | - | Chr3:103451913-103451932 | MsG0380018022.01.T01:intron | 20.0% |
| !! | ATTGAAACATTATCATTGTT+GGG | - | Chr3:103454432-103454451 | MsG0380018022.01.T01:five_prime_UTR | 20.0% |
| !! | CAGTTATGTTATGATATTAT+AGG | - | Chr3:103452671-103452690 | MsG0380018022.01.T01:intron | 20.0% |
| !! | GAATTGAATTGAATTGAATT+TGG | - | Chr3:103451209-103451228 | MsG0380018022.01.T01:three_prime_UTR | 20.0% |
| !! | GATAGTTTATTGAAAGTTTA+TGG | - | Chr3:103452729-103452748 | MsG0380018022.01.T01:intron | 20.0% |
| !! | TAAGATGTTGAAAAAGAAAT+GGG | - | Chr3:103451914-103451933 | MsG0380018022.01.T01:intron | 20.0% |
| !! | TTAGATGCAATAAGAAATTA+GGG | - | Chr3:103453089-103453108 | MsG0380018022.01.T01:intron | 20.0% |
| !!! | AATGTGCAAAATATCTTTTT+AGG | - | Chr3:103451546-103451565 | MsG0380018022.01.T01:intron | 20.0% |
| !!! | ATCCATTTTAACATTTAATG+AGG | + | Chr3:103454299-103454318 | None:intergenic | 20.0% |
| !!! | ATGTTAAAATGGATTGTATT+TGG | - | Chr3:103454305-103454324 | MsG0380018022.01.T01:CDS | 20.0% |
| !!! | TAGATGTATTTTACTAAAAG+AGG | - | Chr3:103453060-103453079 | MsG0380018022.01.T01:intron | 20.0% |
| !!! | TCCATTTTAACATTTAATGA+GGG | + | Chr3:103454298-103454317 | None:intergenic | 20.0% |
| !!! | TGCATCTTTATTTATAAATC+CGG | + | Chr3:103453244-103453263 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTTTTGGCATTT+CGG | - | Chr3:103454166-103454185 | MsG0380018022.01.T01:intron | 20.0% |
| ! | AAAAATGCAACAAATGCTTA+TGG | + | Chr3:103451505-103451524 | None:intergenic | 25.0% |
| ! | AAAATGTTACAATGAAACTG+CGG | + | Chr3:103454228-103454247 | None:intergenic | 25.0% |
| ! | AAACCAAATTTCCATACAAT+TGG | - | Chr3:103451438-103451457 | MsG0380018022.01.T01:three_prime_UTR | 25.0% |
| ! | AAATAAATGCGATGATACTT+AGG | + | Chr3:103453819-103453838 | None:intergenic | 25.0% |
| ! | AACCAAATTTCCATACAATT+GGG | - | Chr3:103451439-103451458 | MsG0380018022.01.T01:three_prime_UTR | 25.0% |
| ! | AATGAATAGAGAAAAAGAAG+GGG | - | Chr3:103452694-103452713 | MsG0380018022.01.T01:intron | 25.0% |
| ! | AATTCTATCTACTTTCTGAT+TGG | + | Chr3:103454347-103454366 | None:intergenic | 25.0% |
| ! | ATATAGATACCAGTTTCTAT+CGG | - | Chr3:103452959-103452978 | MsG0380018022.01.T01:intron | 25.0% |
| ! | ATTACGGAATTAGAAGATTA+AGG | - | Chr3:103454403-103454422 | MsG0380018022.01.T01:five_prime_UTR | 25.0% |
| ! | CAAGATATCTATTCTTAGAA+GGG | - | Chr3:103452763-103452782 | MsG0380018022.01.T01:intron | 25.0% |
| ! | CTGACTAAACTATATAGTAA+TGG | - | Chr3:103452088-103452107 | MsG0380018022.01.T01:intron | 25.0% |
| ! | CTTAGATGCAATAAGAAATT+AGG | - | Chr3:103453088-103453107 | MsG0380018022.01.T01:intron | 25.0% |
| ! | GAATGAATAGAGAAAAAGAA+GGG | - | Chr3:103452693-103452712 | MsG0380018022.01.T01:intron | 25.0% |
| ! | TAAAGATAAGTCCTAAAACA+TGG | - | Chr3:103451587-103451606 | MsG0380018022.01.T01:intron | 25.0% |
| ! | TAATTGAAAAACTGCAAACA+TGG | - | Chr3:103453749-103453768 | MsG0380018022.01.T01:intron | 25.0% |
| ! | TAGATGCAATAAGAAATTAG+GGG | - | Chr3:103453090-103453109 | MsG0380018022.01.T01:intron | 25.0% |
| ! | TATAAAATCTCTGAATGTTC+AGG | + | Chr3:103451706-103451725 | None:intergenic | 25.0% |
| ! | TGTAACTTTATTCCTAAACA+AGG | - | Chr3:103453028-103453047 | MsG0380018022.01.T01:intron | 25.0% |
| ! | TTACGGAATTAGAAGATTAA+GGG | - | Chr3:103454404-103454423 | MsG0380018022.01.T01:five_prime_UTR | 25.0% |
| !! | AACTTCCATAATTGTCATTT+AGG | + | Chr3:103452285-103452304 | None:intergenic | 25.0% |
| !! | ATCTTTATTTATAAATCCGG+GGG | + | Chr3:103453241-103453260 | None:intergenic | 25.0% |
| !! | CAGTTTCATTGTAACATTTT+GGG | - | Chr3:103454228-103454247 | MsG0380018022.01.T01:CDS | 25.0% |
| !! | CATCTTTATTTATAAATCCG+GGG | + | Chr3:103453242-103453261 | None:intergenic | 25.0% |
| !! | GCATCTTTATTTATAAATCC+GGG | + | Chr3:103453243-103453262 | None:intergenic | 25.0% |
| !! | TTTTAACAAACCATGCATTA+TGG | + | Chr3:103451968-103451987 | None:intergenic | 25.0% |
| !!! | AAACATGGTTCTATTTTTTG+TGG | - | Chr3:103453764-103453783 | MsG0380018022.01.T01:intron | 25.0% |
| !!! | AATTTTGAGTATAAACTTCC+AGG | + | Chr3:103453593-103453612 | None:intergenic | 25.0% |
| !!! | CAATTTTTTCACCATGTTTT+AGG | + | Chr3:103451601-103451620 | None:intergenic | 25.0% |
| !!! | CTAAATTTAATGCCTTGTTT+AGG | + | Chr3:103453043-103453062 | None:intergenic | 25.0% |
| !!! | GCAAAATATCTTTTTAGGTT+AGG | - | Chr3:103451551-103451570 | MsG0380018022.01.T01:intron | 25.0% |
| !!! | TTGAAGTCTATATTGCTTTT+AGG | - | Chr3:103453980-103453999 | MsG0380018022.01.T01:CDS | 25.0% |
| !!! | TTTGAAGTCTTTTGTGTATT+CGG | - | Chr3:103453295-103453314 | MsG0380018022.01.T01:intron | 25.0% |
| AAATTGATTGTATAGTCCTG+TGG | - | Chr3:103451615-103451634 | MsG0380018022.01.T01:exon | 30.0% | |
| AACTGAGACACAATTGAAAT+AGG | + | Chr3:103452844-103452863 | None:intergenic | 30.0% | |
| ACAATTCACCTTTGATTACA+TGG | + | Chr3:103454124-103454143 | None:intergenic | 30.0% | |
| ACGTGATATTGTGATGAAAA+AGG | + | Chr3:103452120-103452139 | None:intergenic | 30.0% | |
| ATAACATAGAAAAAACCCAC+AGG | + | Chr3:103453396-103453415 | None:intergenic | 30.0% | |
| ATCTGACAAACAAACTTGAT+CGG | - | Chr3:103453903-103453922 | MsG0380018022.01.T01:CDS | 30.0% | |
| ATGAATAGAGAAAAAGAAGG+GGG | - | Chr3:103452695-103452714 | MsG0380018022.01.T01:intron | 30.0% | |
| ATGACAATTATGGAAGTTCA+TGG | - | Chr3:103452287-103452306 | MsG0380018022.01.T01:intron | 30.0% | |
| ATGATTCTAATTACGTAGGA+AGG | - | Chr3:103452602-103452621 | MsG0380018022.01.T01:intron | 30.0% | |
| ATGTAATCAAAGGTGAATTG+TGG | - | Chr3:103454123-103454142 | MsG0380018022.01.T01:intron | 30.0% | |
| ATTGCTGCATTATATATGCA+TGG | - | Chr3:103452019-103452038 | MsG0380018022.01.T01:intron | 30.0% | |
| CCAAGATATCTATTCTTAGA+AGG | - | Chr3:103452762-103452781 | MsG0380018022.01.T01:intron | 30.0% | |
| CTATATGACATCTCAAAACT+CGG | + | Chr3:103451818-103451837 | None:intergenic | 30.0% | |
| GACACAATTGAAATAGGAAT+AGG | + | Chr3:103452838-103452857 | None:intergenic | 30.0% | |
| GCCCTCATTAAATGTTAAAA+TGG | - | Chr3:103454294-103454313 | MsG0380018022.01.T01:CDS | 30.0% | |
| GGAATGAATAGAGAAAAAGA+AGG | - | Chr3:103452692-103452711 | MsG0380018022.01.T01:intron | 30.0% | |
| GTAATGACATAGATAAGATG+AGG | - | Chr3:103453549-103453568 | MsG0380018022.01.T01:intron | 30.0% | |
| TACTGTATCTATCAAACAGA+AGG | - | Chr3:103451771-103451790 | MsG0380018022.01.T01:intron | 30.0% | |
| TAGAAGTAGAAGTTGAAGAA+GGG | + | Chr3:103451041-103451060 | None:intergenic | 30.0% | |
| TATAGTCTCCATGTAATCAA+AGG | - | Chr3:103454113-103454132 | MsG0380018022.01.T01:intron | 30.0% | |
| TATGATGTTGATACAAACTC+TGG | - | Chr3:103452484-103452503 | MsG0380018022.01.T01:intron | 30.0% | |
| TATGTATACATGTAGGTGAT+TGG | - | Chr3:103452541-103452560 | MsG0380018022.01.T01:intron | 30.0% | |
| TCATCACAATATCACGTATA+TGG | - | Chr3:103452123-103452142 | MsG0380018022.01.T01:intron | 30.0% | |
| TTAGGAATAAAGTTACAGTG+AGG | + | Chr3:103453025-103453044 | None:intergenic | 30.0% | |
| TTGCATGATTCTAATTACGT+AGG | - | Chr3:103452598-103452617 | MsG0380018022.01.T01:intron | 30.0% | |
| ! | AAAATCAAATTTGCTTCAGG+TGG | + | Chr3:103453619-103453638 | None:intergenic | 30.0% |
| ! | AAGATGCAATATTTGGAGTT+TGG | - | Chr3:103453256-103453275 | MsG0380018022.01.T01:intron | 30.0% |
| ! | ATCAAGTTTGTTTGTCAGAT+TGG | + | Chr3:103453903-103453922 | None:intergenic | 30.0% |
| ! | CAATATTTGGAGTTTGGATT+TGG | - | Chr3:103453262-103453281 | MsG0380018022.01.T01:intron | 30.0% |
| ! | CATCTCAGATTTTTGCATAT+CGG | + | Chr3:103451365-103451384 | None:intergenic | 30.0% |
| ! | CCTTCTAAGAATAGATATCT+TGG | + | Chr3:103452765-103452784 | None:intergenic | 30.0% |
| ! | GAGTGATGATGATATATGTT+TGG | - | Chr3:103451738-103451757 | MsG0380018022.01.T01:intron | 30.0% |
| ! | GCAGTTTCATTGTAACATTT+TGG | - | Chr3:103454227-103454246 | MsG0380018022.01.T01:CDS | 30.0% |
| ! | GTGAAAATCAAATTTGCTTC+AGG | + | Chr3:103453622-103453641 | None:intergenic | 30.0% |
| ! | TATTATTGATTGTCTGTGAC+AGG | - | Chr3:103453670-103453689 | MsG0380018022.01.T01:intron | 30.0% |
| ! | TTTTAACATTTAATGAGGGC+CGG | + | Chr3:103454294-103454313 | None:intergenic | 30.0% |
| !! | AAATGGATTGTATTTGGTTG+TGG | - | Chr3:103454311-103454330 | MsG0380018022.01.T01:CDS | 30.0% |
| !! | TGTTATACTTTTGAGAACAC+AGG | - | Chr3:103453410-103453429 | MsG0380018022.01.T01:intron | 30.0% |
| !!! | CTCTCTTTCACTTCTTTTTT+CGG | - | Chr3:103452044-103452063 | MsG0380018022.01.T01:intron | 30.0% |
| !!! | TACAAACGTGCTTTTGATTT+GGG | - | Chr3:103450982-103451001 | MsG0380018022.01.T01:three_prime_UTR | 30.0% |
| !!! | TCTCTTTCACTTCTTTTTTC+GGG | - | Chr3:103452045-103452064 | MsG0380018022.01.T01:intron | 30.0% |
| AACCATGCATTATGGCAATA+TGG | + | Chr3:103451960-103451979 | None:intergenic | 35.0% | |
| AAGAACCTAGTAAACTGCAA+AGG | - | Chr3:103451987-103452006 | MsG0380018022.01.T01:intron | 35.0% | |
| ACACAGAATCACAAAACTTC+TGG | - | Chr3:103454258-103454277 | MsG0380018022.01.T01:CDS | 35.0% | |
| ACTATAATAGATGCGGATCA+CGG | + | Chr3:103454099-103454118 | None:intergenic | 35.0% | |
| AGAAATTAGGGGAAAGTGAT+TGG | - | Chr3:103453101-103453120 | MsG0380018022.01.T01:intron | 35.0% | |
| ATAAGATGAGGACTGAATTG+AGG | - | Chr3:103453561-103453580 | MsG0380018022.01.T01:intron | 35.0% | |
| ATACACGCTTTATCTGTAGA+CGG | - | Chr3:103452995-103453014 | MsG0380018022.01.T01:intron | 35.0% | |
| ATTAATCAAGCATTCTCGTG+AGG | - | Chr3:103451871-103451890 | MsG0380018022.01.T01:CDS | 35.0% | |
| ATTTAATCACAGACGCATTC+AGG | - | Chr3:103453847-103453866 | MsG0380018022.01.T01:intron | 35.0% | |
| CAAGTTATTTGCAGAACTTC+AGG | + | Chr3:103452214-103452233 | None:intergenic | 35.0% | |
| CATGGAGACTATAATAGATG+CGG | + | Chr3:103454106-103454125 | None:intergenic | 35.0% | |
| CGAAAAAAGAAGTGAAAGAG+AGG | + | Chr3:103452046-103452065 | None:intergenic | 35.0% | |
| CTACAGATAAAGCGTGTATA+GGG | + | Chr3:103452994-103453013 | None:intergenic | 35.0% | |
| CTTTCATTTGTTCTTGGCAT+GGG | - | Chr3:103452507-103452526 | MsG0380018022.01.T01:intron | 35.0% | |
| GACCCAATTGTATGGAAATT+TGG | + | Chr3:103451444-103451463 | None:intergenic | 35.0% | |
| GATAGCTAGGCATATTCTAT+AGG | - | Chr3:103453355-103453374 | MsG0380018022.01.T01:intron | 35.0% | |
| GATGTGATCAAATACTGCAT+AGG | - | Chr3:103454043-103454062 | MsG0380018022.01.T01:CDS | 35.0% | |
| GGATAGTCTACAGTTACAAA+TGG | + | Chr3:103452817-103452836 | None:intergenic | 35.0% | |
| GGGAATCTATGTATACATGT+AGG | - | Chr3:103452534-103452553 | MsG0380018022.01.T01:intron | 35.0% | |
| GTAGAAGTAGAAGTTGAAGA+AGG | + | Chr3:103451042-103451061 | None:intergenic | 35.0% | |
| TCAAACAGAAGGTTTAGCAT+CGG | - | Chr3:103451782-103451801 | MsG0380018022.01.T01:CDS | 35.0% | |
| TCAAAGGTGAATTGTGGTTA+TGG | - | Chr3:103454129-103454148 | MsG0380018022.01.T01:intron | 35.0% | |
| TCATACTTTGCAGCTTCTAA+CGG | + | Chr3:103454025-103454044 | None:intergenic | 35.0% | |
| TCTACAGATAAAGCGTGTAT+AGG | + | Chr3:103452995-103453014 | None:intergenic | 35.0% | |
| TCTGACAAACAAACTTGATC+GGG | - | Chr3:103453904-103453923 | MsG0380018022.01.T01:CDS | 35.0% | |
| TCTGATGCAGTAACTCTTTA+TGG | - | Chr3:103453789-103453808 | MsG0380018022.01.T01:intron | 35.0% | |
| TGAAAGTTTATGGGAATGAG+AGG | - | Chr3:103452739-103452758 | MsG0380018022.01.T01:intron | 35.0% | |
| TGAAGTTCTTAATGACAGCT+TGG | - | Chr3:103451309-103451328 | MsG0380018022.01.T01:three_prime_UTR | 35.0% | |
| TGGACTTGAATCTTGAAAGA+AGG | - | Chr3:103453726-103453745 | MsG0380018022.01.T01:intron | 35.0% | |
| TTCAATTGTGTCTCAGTTTC+AGG | - | Chr3:103452846-103452865 | MsG0380018022.01.T01:intron | 35.0% | |
| TTTAACATTTAATGAGGGCC+GGG | + | Chr3:103454293-103454312 | None:intergenic | 35.0% | |
| TTTCATTTGTTCTTGGCATG+GGG | - | Chr3:103452508-103452527 | MsG0380018022.01.T01:intron | 35.0% | |
| TTTGTTTCAAATATCACCCC+CGG | - | Chr3:103453222-103453241 | MsG0380018022.01.T01:intron | 35.0% | |
| ! | ATCTGAAGTCAAAACTTCTC+AGG | - | Chr3:103451414-103451433 | MsG0380018022.01.T01:intron | 35.0% |
| ! | TATTGTGATGAAAAAGGTGC+TGG | + | Chr3:103452114-103452133 | None:intergenic | 35.0% |
| ! | TTAAGTCGTCCTTTTGATGA+TGG | - | Chr3:103453476-103453495 | MsG0380018022.01.T01:intron | 35.0% |
| !! | GTACAAACGTGCTTTTGATT+TGG | - | Chr3:103450981-103451000 | MsG0380018022.01.T01:three_prime_UTR | 35.0% |
| !!! | CTCTTTCACTTCTTTTTTCG+GGG | - | Chr3:103452046-103452065 | MsG0380018022.01.T01:intron | 35.0% |
| AAACAGAAGGTTTAGCATCG+GGG | - | Chr3:103451784-103451803 | MsG0380018022.01.T01:CDS | 40.0% | |
| AAGCTGTTGACCCAATTGTA+TGG | + | Chr3:103451452-103451471 | None:intergenic | 40.0% | |
| ACTGGATTCTGTTTCAACAG+AGG | + | Chr3:103452897-103452916 | None:intergenic | 40.0% | |
| AGAAGGGAATAAAGAAGCGA+CGG | + | Chr3:103451025-103451044 | None:intergenic | 40.0% | |
| AGACTCTCGAATTTCTTGGA+AGG | - | Chr3:103452788-103452807 | MsG0380018022.01.T01:intron | 40.0% | |
| AGATTGACAAAGTCACTGCT+GGG | - | Chr3:103453697-103453716 | MsG0380018022.01.T01:intron | 40.0% | |
| AGCTATCTGTTGAGATGTTG+TGG | + | Chr3:103453342-103453361 | None:intergenic | 40.0% | |
| AGGACGACTTAAACATCTGA+TGG | + | Chr3:103453468-103453487 | None:intergenic | 40.0% | |
| ATTCTGTTTCAACAGAGGGA+TGG | + | Chr3:103452892-103452911 | None:intergenic | 40.0% | |
| CAAACAGAAGGTTTAGCATC+GGG | - | Chr3:103451783-103451802 | MsG0380018022.01.T01:CDS | 40.0% | |
| CAAATCTTCAACTGCTTCTG+CGG | - | Chr3:103453178-103453197 | MsG0380018022.01.T01:intron | 40.0% | |
| CAACATCTCAACAGATAGCT+AGG | - | Chr3:103453342-103453361 | MsG0380018022.01.T01:intron | 40.0% | |
| CACTGCAGATATGGAGATAA+GGG | + | Chr3:103454071-103454090 | None:intergenic | 40.0% | |
| CATACTATGCACTTTCCTGT+GGG | - | Chr3:103453378-103453397 | MsG0380018022.01.T01:intron | 40.0% | |
| CATACTTTGCAGCTTCTAAC+GGG | + | Chr3:103454024-103454043 | None:intergenic | 40.0% | |
| CTGGATTCTGTTTCAACAGA+GGG | + | Chr3:103452896-103452915 | None:intergenic | 40.0% | |
| CTTATCTCCATATCTGCAGT+GGG | - | Chr3:103454070-103454089 | MsG0380018022.01.T01:CDS | 40.0% | |
| GAACTTCAGGAGAGATTTCA+AGG | + | Chr3:103452201-103452220 | None:intergenic | 40.0% | |
| GACTCTCGAATTTCTTGGAA+GGG | - | Chr3:103452789-103452808 | MsG0380018022.01.T01:intron | 40.0% | |
| GCATGTTAGGCTTCTTATTG+CGG | - | Chr3:103452626-103452645 | MsG0380018022.01.T01:intron | 40.0% | |
| GCTTTCATTTGTTCTTGGCA+TGG | - | Chr3:103452506-103452525 | MsG0380018022.01.T01:intron | 40.0% | |
| GTACGGAATTTAGAGACGAA+CGG | - | Chr3:103451244-103451263 | MsG0380018022.01.T01:three_prime_UTR | 40.0% | |
| TACGGAATTTAGAGACGAAC+GGG | - | Chr3:103451245-103451264 | MsG0380018022.01.T01:three_prime_UTR | 40.0% | |
| TCTAAATTCCGTACCTAGGT+AGG | + | Chr3:103451238-103451257 | None:intergenic | 40.0% | |
| TTAACATTTAATGAGGGCCG+GGG | + | Chr3:103454292-103454311 | None:intergenic | 40.0% | |
| TTGAATTTGGGTACCTACCT+AGG | - | Chr3:103451222-103451241 | MsG0380018022.01.T01:three_prime_UTR | 40.0% | |
| TTTGGCATTTCGGAGATCAA+AGG | - | Chr3:103454176-103454195 | MsG0380018022.01.T01:intron | 40.0% | |
| ! | AAGGAGCGCATTGTTTCAAT+TGG | - | Chr3:103454195-103454214 | MsG0380018022.01.T01:intron | 40.0% |
| ! | CTCTATCTCTCTGGATTAGA+TGG | - | Chr3:103450954-103450973 | MsG0380018022.01.T01:three_prime_UTR | 40.0% |
| !! | AAAGAAGGGGGAAGTGTTTA+TGG | - | Chr3:103452707-103452726 | MsG0380018022.01.T01:intron | 40.0% |
| !! | CTCTGGCTTTCATTTGTTCT+TGG | - | Chr3:103452501-103452520 | MsG0380018022.01.T01:intron | 40.0% |
| !! | GTTAGCCTTTGCAGTTTACT+AGG | + | Chr3:103451995-103452014 | None:intergenic | 40.0% |
| !! | TACTTTTGAGAACACAGGAC+AGG | - | Chr3:103453415-103453434 | MsG0380018022.01.T01:intron | 40.0% |
| !!! | AAGTGATTGGTTTTTGGCTG+AGG | - | Chr3:103453114-103453133 | MsG0380018022.01.T01:intron | 40.0% |
| !!! | AGGGGAAAGTGATTGGTTTT+TGG | - | Chr3:103453108-103453127 | MsG0380018022.01.T01:intron | 40.0% |
| AACAAGCTGAGGCGATAACT+TGG | - | Chr3:103451278-103451297 | MsG0380018022.01.T01:three_prime_UTR | 45.0% | |
| AACTTCTGGTGTAGTATCCC+CGG | - | Chr3:103454272-103454291 | MsG0380018022.01.T01:CDS | 45.0% | |
| ACAAGCTGAGGCGATAACTT+GGG | - | Chr3:103451279-103451298 | MsG0380018022.01.T01:three_prime_UTR | 45.0% | |
| ACTGAATTGAGGTCTGTACC+TGG | - | Chr3:103453572-103453591 | MsG0380018022.01.T01:intron | 45.0% | |
| AGGGACGAACAAAAGCTGAA+AGG | + | Chr3:103452324-103452343 | None:intergenic | 45.0% | |
| CCACTGCAGATATGGAGATA+AGG | + | Chr3:103454072-103454091 | None:intergenic | 45.0% | |
| CCTGCATCACCATCATCAAA+AGG | + | Chr3:103453488-103453507 | None:intergenic | 45.0% | |
| CCTTATCTCCATATCTGCAG+TGG | - | Chr3:103454069-103454088 | MsG0380018022.01.T01:CDS | 45.0% | |
| CGCAGAAGCAGTTGAAGATT+TGG | + | Chr3:103453180-103453199 | None:intergenic | 45.0% | |
| CGTCTCTAAATTCCGTACCT+AGG | + | Chr3:103451242-103451261 | None:intergenic | 45.0% | |
| CTTCTACTTCTACTAGCACC+AGG | - | Chr3:103451049-103451068 | MsG0380018022.01.T01:three_prime_UTR | 45.0% | |
| GAGATTGACAAAGTCACTGC+TGG | - | Chr3:103453696-103453715 | MsG0380018022.01.T01:intron | 45.0% | |
| GCAATATGGCCTACAAGTCT+AGG | + | Chr3:103451946-103451965 | None:intergenic | 45.0% | |
| GCATACTATGCACTTTCCTG+TGG | - | Chr3:103453377-103453396 | MsG0380018022.01.T01:intron | 45.0% | |
| GCGTTTAACGTTGGAATCGA+CGG | + | Chr3:103451088-103451107 | None:intergenic | 45.0% | |
| GGAGAGACTCTCGAATTTCT+TGG | - | Chr3:103452784-103452803 | MsG0380018022.01.T01:intron | 45.0% | |
| GGCCATATTGCCATAATGCA+TGG | - | Chr3:103451955-103451974 | MsG0380018022.01.T01:intron | 45.0% | |
| TGAAGTGGAGAACGTTCAGT+TGG | - | Chr3:103453956-103453975 | MsG0380018022.01.T01:CDS | 45.0% | |
| TTGTTCTTGGCATGGGGTTT+GGG | - | Chr3:103452514-103452533 | MsG0380018022.01.T01:intron | 45.0% | |
| TTTGGGTACCTACCTAGGTA+CGG | - | Chr3:103451227-103451246 | MsG0380018022.01.T01:three_prime_UTR | 45.0% | |
| TTTGTTCTTGGCATGGGGTT+TGG | - | Chr3:103452513-103452532 | MsG0380018022.01.T01:intron | 45.0% | |
| ! | AAGAGTCGACGTGATTTTCC+TGG | + | Chr3:103452357-103452376 | None:intergenic | 45.0% |
| ! | AGAGTCGACGTGATTTTCCT+GGG | + | Chr3:103452356-103452375 | None:intergenic | 45.0% |
| ! | ATTTTCCTGGGACTGACTAC+AGG | + | Chr3:103452344-103452363 | None:intergenic | 45.0% |
| ! | TACGTAGGAAGGTGCATGTT+AGG | - | Chr3:103452613-103452632 | MsG0380018022.01.T01:intron | 45.0% |
| ! | TTTTCCTGGGACTGACTACA+GGG | + | Chr3:103452343-103452362 | None:intergenic | 45.0% |
| !! | GTTATCGCCTCAGCTTGTTT+TGG | + | Chr3:103451277-103451296 | None:intergenic | 45.0% |
| !!! | CCTTTTGATGATGGTGATGC+AGG | - | Chr3:103453485-103453504 | MsG0380018022.01.T01:intron | 45.0% |
| !! | AAAAGTAAATTAAAATTTAT+TGG | + | Chr3:103451683-103451702 | None:intergenic | 5.0% |
| !! | TTAAATATTAAAAAAATGAA+AGG | + | Chr3:103451477-103451496 | None:intergenic | 5.0% |
| CCAGTGCAACCGATAGAAAC+TGG | + | Chr3:103452971-103452990 | None:intergenic | 50.0% | |
| CCTGTGGTTCACACTCTTTC+TGG | - | Chr3:103451631-103451650 | MsG0380018022.01.T01:CDS | 50.0% | |
| GAGGAATGCGCGTTTAACGT+TGG | + | Chr3:103451097-103451116 | None:intergenic | 50.0% | |
| GCATCAGCTCTCTATCTCTC+TGG | - | Chr3:103450945-103450964 | MsG0380018022.01.T01:three_prime_UTR | 50.0% | |
| GCTTCCTCCAAAACAAGCTG+AGG | - | Chr3:103451267-103451286 | MsG0380018022.01.T01:three_prime_UTR | 50.0% | |
| GGGTAGAGTCCTAGACTTGT+AGG | - | Chr3:103451934-103451953 | MsG0380018022.01.T01:intron | 50.0% | |
| TAGCACCAGGCATGTTTCAC+AGG | - | Chr3:103451062-103451081 | MsG0380018022.01.T01:three_prime_UTR | 50.0% | |
| TCTTCAACTGCTTCTGCGGA+TGG | - | Chr3:103453182-103453201 | MsG0380018022.01.T01:intron | 50.0% | |
| ! | CCAGAAAGAGTGTGAACCAC+AGG | + | Chr3:103451634-103451653 | None:intergenic | 50.0% |
| ! | CCAGTTTCTATCGGTTGCAC+TGG | - | Chr3:103452968-103452987 | MsG0380018022.01.T01:intron | 50.0% |
| !!! | ATCGCCTCAGCTTGTTTTGG+AGG | + | Chr3:103451274-103451293 | None:intergenic | 50.0% |
| AAGTCACTGCTGGGCAACGA+TGG | - | Chr3:103453706-103453725 | MsG0380018022.01.T01:intron | 55.0% | |
| ! | CGAGTGCAAGTGTATCGACG+AGG | + | Chr3:103451116-103451135 | None:intergenic | 55.0% |
| ! | GAAGGTTTAGCATCGGGGAC+AGG | - | Chr3:103451789-103451808 | MsG0380018022.01.T01:CDS | 55.0% |
| ACGGCGACCCACTGCAGATA+TGG | + | Chr3:103454080-103454099 | None:intergenic | 60.0% | |
| GACGGCCTGTGAAACATGCC+TGG | + | Chr3:103451070-103451089 | None:intergenic | 60.0% | |
| TCGTCCCTGTAGTCAGTCCC+AGG | - | Chr3:103452336-103452355 | MsG0380018022.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 103450903 | 103454451 | 103450903 | ID=MsG0380018022.01;Name=MsG0380018022.01 |
| Chr3 | mRNA | 103450903 | 103454451 | 103450903 | ID=MsG0380018022.01.T01;Parent=MsG0380018022.01;Name=MsG0380018022.01.T01;_AED=0.34;_eAED=0.34;_QI=70|0.8|0.66|1|0.4|0.16|6|530|190 |
| Chr3 | exon | 103450903 | 103451352 | 103450903 | ID=MsG0380018022.01.T01:exon:18503;Parent=MsG0380018022.01.T01 |
| Chr3 | exon | 103451429 | 103451495 | 103451429 | ID=MsG0380018022.01.T01:exon:18502;Parent=MsG0380018022.01.T01 |
| Chr3 | exon | 103451607 | 103451662 | 103451607 | ID=MsG0380018022.01.T01:exon:18501;Parent=MsG0380018022.01.T01 |
| Chr3 | exon | 103451772 | 103451922 | 103451772 | ID=MsG0380018022.01.T01:exon:18500;Parent=MsG0380018022.01.T01 |
| Chr3 | exon | 103453894 | 103454110 | 103453894 | ID=MsG0380018022.01.T01:exon:18499;Parent=MsG0380018022.01.T01 |
| Chr3 | exon | 103454220 | 103454451 | 103454220 | ID=MsG0380018022.01.T01:exon:18498;Parent=MsG0380018022.01.T01 |
| Chr3 | five_prime_UTR | 103454382 | 103454451 | 103454382 | ID=MsG0380018022.01.T01:five_prime_utr;Parent=MsG0380018022.01.T01 |
| Chr3 | CDS | 103454220 | 103454381 | 103454220 | ID=MsG0380018022.01.T01:cds;Parent=MsG0380018022.01.T01 |
| Chr3 | CDS | 103453894 | 103454110 | 103453894 | ID=MsG0380018022.01.T01:cds;Parent=MsG0380018022.01.T01 |
| Chr3 | CDS | 103451772 | 103451922 | 103451772 | ID=MsG0380018022.01.T01:cds;Parent=MsG0380018022.01.T01 |
| Chr3 | CDS | 103451620 | 103451662 | 103451620 | ID=MsG0380018022.01.T01:cds;Parent=MsG0380018022.01.T01 |
| Chr3 | three_prime_UTR | 103451607 | 103451619 | 103451607 | ID=MsG0380018022.01.T01:three_prime_utr;Parent=MsG0380018022.01.T01 |
| Chr3 | three_prime_UTR | 103451429 | 103451495 | 103451429 | ID=MsG0380018022.01.T01:three_prime_utr;Parent=MsG0380018022.01.T01 |
| Chr3 | three_prime_UTR | 103450903 | 103451352 | 103450903 | ID=MsG0380018022.01.T01:three_prime_utr;Parent=MsG0380018022.01.T01 |
| Gene Sequence |
| Protein sequence |
