AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015511.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015511.01.T01 MTR_3g071560 99.118 340 3 0 1 340 1 340 0.0 691
MsG0380015511.01.T01 MTR_3g071550 90.000 340 34 0 1 340 1 340 0.0 575
MsG0380015511.01.T01 MTR_3g071540 81.471 340 61 1 1 340 1 338 0.0 544
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015511.01.T01 AT2G40290 82.301 339 59 1 3 340 6 344 0.0 536
MsG0380015511.01.T01 AT5G05470 76.991 339 77 1 3 340 6 344 3.72e-180 502
MsG0380015511.01.T01 AT2G40290 90.000 220 22 0 3 222 6 225 1.75e-139 395
MsG0380015511.01.T01 AT2G40290 90.000 220 22 0 3 222 6 225 1.75e-139 395

Find 91 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGCAATGGTTCCGAATT+TGG 0.119492 3:-71230054 MsG0380015511.01.T01:exon
ATGAATGGAAATGTGAAATT+TGG 0.208144 3:+71230128 None:intergenic
AACCTTGAACCTTGATTTAG+AGG 0.251703 3:-71229694 MsG0380015511.01.T01:intron
GTGAATTCTCTCTCTGTGTT+TGG 0.252884 3:+71230098 None:intergenic
TGATGGAGTTCTCCATATTA+AGG 0.293472 3:-71228630 MsG0380015511.01.T01:intron
TGAATTCTCTCTCTGTGTTT+GGG 0.322671 3:+71230099 None:intergenic
AACGGTTAAAGACCTTAATA+TGG 0.337932 3:+71228618 None:intergenic
TTGACAGGAGCAAGGAATAT+TGG 0.344432 3:-71226727 MsG0380015511.01.T01:intron
TGGCCTTTGTATCGCAAATA+TGG 0.345695 3:-71229560 MsG0380015511.01.T01:CDS
ACAGGCGTTCAAAAGAGTTT+TGG 0.360184 3:-71228846 MsG0380015511.01.T01:intron
ATTACAGCCATGTCCACTTC+TGG 0.365095 3:+71230005 None:intergenic
ATGGCGACACTCACCACTTT+GGG 0.382991 3:+71226630 None:intergenic
TGGAATGGGCGAGGTTGATC+TGG 0.384088 3:-71226054 MsG0380015511.01.T01:CDS
TGAATGGAAATGTGAAATTT+GGG 0.392618 3:+71230129 None:intergenic
TGCCCTGAGTTTCAATGGCT+GGG 0.400011 3:+71228679 None:intergenic
AGGATCTTTATGTTCACATT+GGG 0.401367 3:-71229583 MsG0380015511.01.T01:CDS
TTAGTCACTTCTTGCCCATC+AGG 0.406251 3:+71228770 None:intergenic
ATGCGGAAGGCTGAAGCTGC+TGG 0.416771 3:-71228497 MsG0380015511.01.T01:CDS
TACATGCGACATTCCAAATT+CGG 0.421674 3:+71230041 None:intergenic
TACCTCTAAATCAAGGTTCA+AGG 0.430422 3:+71229692 None:intergenic
ATCAAGGAAGTTGGTCCTGA+TGG 0.437985 3:-71228785 MsG0380015511.01.T01:CDS
CTGCCCTGAGTTTCAATGGC+TGG 0.438165 3:+71228678 None:intergenic
AGTGCGCTCAAAACCGCATC+AGG 0.439107 3:+71228818 None:intergenic
AGTGAAGAGGAAGAAGATAC+TGG 0.441245 3:-71226074 MsG0380015511.01.T01:CDS
ATCTTTATGTTCACATTGGG+TGG 0.442585 3:-71229580 MsG0380015511.01.T01:CDS
CGCACTCACGCGTGAAATCA+AGG 0.444977 3:-71228801 MsG0380015511.01.T01:CDS
TCTTCGTGTTGACAAAGAAA+AGG 0.445576 3:-71229826 MsG0380015511.01.T01:CDS
ATATCTGCCCTGAGTTTCAA+TGG 0.448822 3:+71228674 None:intergenic
TTACAGCCATGTCCACTTCT+GGG 0.454949 3:+71230006 None:intergenic
CTTCGTGTTGACAAAGAAAA+GGG 0.455904 3:-71229825 MsG0380015511.01.T01:CDS
TAGGATCTTTATGTTCACAT+TGG 0.468659 3:-71229584 MsG0380015511.01.T01:CDS
GCAACAAGTTTAATATTCAC+AGG 0.469029 3:+71228461 None:intergenic
TGGTCGAATCGAACCGGTGA+TGG 0.469064 3:-71229850 MsG0380015511.01.T01:CDS
GATGGCGACACTCACCACTT+TGG 0.486619 3:+71226629 None:intergenic
CTCCCCAGCCATTGAAACTC+AGG 0.492860 3:-71228682 MsG0380015511.01.T01:CDS
AATGTGAAATTTGGGAATGA+GGG 0.492892 3:+71230137 None:intergenic
TCAGGGTTACCTCTAAATCA+AGG 0.493568 3:+71229685 None:intergenic
CAAAGTTGGTCGAATCGAAC+CGG 0.505539 3:-71229856 MsG0380015511.01.T01:CDS
GGACATGGCTGTAATGATAC+AGG 0.506559 3:-71229997 MsG0380015511.01.T01:CDS
GCCCTGAGTTTCAATGGCTG+GGG 0.515830 3:+71228680 None:intergenic
GGACAATGGTAATGCGATAA+CGG 0.523163 3:-71226033 MsG0380015511.01.T01:CDS
TTCACTTCTTCAGATACAGC+AGG 0.523729 3:+71228740 None:intergenic
TGCTGTATCTGAAGAAGTGA+AGG 0.526949 3:-71228738 MsG0380015511.01.T01:CDS
AAATGTGAAATTTGGGAATG+AGG 0.527231 3:+71230136 None:intergenic
GAGGAAGAAGATACTGGAAT+GGG 0.536370 3:-71226068 MsG0380015511.01.T01:CDS
GTTAGCAGTCTAATCAAAGT+TGG 0.537924 3:-71229870 MsG0380015511.01.T01:CDS
TTTGTCTTGTCTCTTGATTG+TGG 0.538054 3:-71225945 MsG0380015511.01.T01:three_prime_UTR
TCTCCGAGCTTTCTCGTCGT+CGG 0.539609 3:-71229902 MsG0380015511.01.T01:CDS
CGATGTTGTTGTATTCGAGA+AGG 0.541627 3:+71229940 None:intergenic
GAGTGGTAAGCACATAAAGC+GGG 0.542338 3:+71228435 None:intergenic
TTTGCAGGAGGCAATGCGGA+AGG 0.543430 3:-71228510 MsG0380015511.01.T01:intron
GTGTTTGGGTGATGAATGAA+TGG 0.544564 3:+71230113 None:intergenic
TCAAGGAAGTTGGTCCTGAT+GGG 0.550624 3:-71228784 MsG0380015511.01.T01:CDS
TGATGGGCAAGAAGTGACTA+AGG 0.551186 3:-71228768 MsG0380015511.01.T01:CDS
GGTCAAGAACATCGCAGACA+TGG 0.553038 3:-71229976 MsG0380015511.01.T01:CDS
GAATGCCATCGCTTGTTGCA+TGG 0.556324 3:-71226697 MsG0380015511.01.T01:CDS
ATATTCAAGCTTGTGAAGAA+AGG 0.557728 3:-71229764 MsG0380015511.01.T01:CDS
AGAGGAAGAAGATACTGGAA+TGG 0.562073 3:-71226069 MsG0380015511.01.T01:CDS
CGAAGCAAAATACCCAGAAG+TGG 0.565713 3:-71230018 MsG0380015511.01.T01:CDS
GATGTTGTTGTATTCGAGAA+GGG 0.576142 3:+71229941 None:intergenic
ACGCGTGAAATCAAGGAAGT+TGG 0.578985 3:-71228794 MsG0380015511.01.T01:CDS
TGATTCCATGCAACAAGCGA+TGG 0.587557 3:+71226692 None:intergenic
AGAAGATACTGGAATGGGCG+AGG 0.594274 3:-71226063 MsG0380015511.01.T01:CDS
AAAATACCCAGAAGTGGACA+TGG 0.597288 3:-71230012 MsG0380015511.01.T01:CDS
AATCCGACGACGAGAAAGCT+CGG 0.601965 3:+71229899 None:intergenic
TTACGATCTTGACAGGAGCA+AGG 0.602205 3:-71226735 MsG0380015511.01.T01:intron
TCAACACGAAGAACCATCAC+CGG 0.602853 3:+71229837 None:intergenic
TGACCATATTTGCGATACAA+AGG 0.605989 3:+71229557 None:intergenic
ATATTGCACCAACCTTGTCA+AGG 0.608525 3:+71228408 None:intergenic
CTCGAATACAACAACATCGA+GGG 0.610805 3:-71229936 MsG0380015511.01.T01:CDS
CAAGGGTAAACTTACTGTGA+AGG 0.611828 3:-71226658 MsG0380015511.01.T01:CDS
TATTGCACCAACCTTGTCAA+GGG 0.612175 3:+71228409 None:intergenic
CAACAAGATAATGAAGAGGT+CGG 0.615161 3:-71226110 MsG0380015511.01.T01:CDS
AACCTTGTCAAGGGTATGAG+TGG 0.617048 3:+71228418 None:intergenic
TCCCCAGCCATTGAAACTCA+GGG 0.617631 3:-71228681 MsG0380015511.01.T01:CDS
GATACAACAAGATAATGAAG+AGG 0.622833 3:-71226114 MsG0380015511.01.T01:CDS
GTCAAGAACATCGCAGACAT+GGG 0.624793 3:-71229975 MsG0380015511.01.T01:CDS
AGGCGATGATGACAGTGAAG+AGG 0.628516 3:-71226087 MsG0380015511.01.T01:CDS
TACCACTCATACCCTTGACA+AGG 0.637281 3:-71228420 MsG0380015511.01.T01:intron
CAACAAGTTTAATATTCACA+GGG 0.641956 3:+71228462 None:intergenic
TGTGAAGGAGCAACCCAAAG+TGG 0.645392 3:-71226643 MsG0380015511.01.T01:intron
GGCGAGGTTGATCTGGACAA+TGG 0.654514 3:-71226047 MsG0380015511.01.T01:CDS
TGAGTGGTAAGCACATAAAG+CGG 0.662787 3:+71228434 None:intergenic
AGTGGTAAGCACATAAAGCG+GGG 0.667337 3:+71228436 None:intergenic
GGAATCAATAGAAAAGCACA+AGG 0.675937 3:-71226676 MsG0380015511.01.T01:CDS
GTGGTAAGCACATAAAGCGG+GGG 0.702146 3:+71228437 None:intergenic
CAAGATAATGAAGAGGTCGG+AGG 0.711850 3:-71226107 MsG0380015511.01.T01:CDS
TGGGCAAGAAGTGACTAAGG+TGG 0.716625 3:-71228765 MsG0380015511.01.T01:CDS
TCTCGAATACAACAACATCG+AGG 0.737927 3:-71229937 MsG0380015511.01.T01:CDS
TGGCTTTGCAGGAGGCAATG+CGG 0.740806 3:-71228514 MsG0380015511.01.T01:intron
GAATCAATAGAAAAGCACAA+GGG 0.753274 3:-71226675 MsG0380015511.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACAAAAACAAAAAAAT+AGG + Chr3:71226287-71226306 None:intergenic 10.0%
!! GAAATATTAAAATTTATGTT+AGG + Chr3:71227903-71227922 None:intergenic 10.0%
!!! AACAAATTTTATTTGTAATT+AGG - Chr3:71226418-71226437 MsG0380015511.01.T01:intron 10.0%
!!! ATTTTTTTTATATGAATGAA+TGG + Chr3:71230139-71230158 None:intergenic 10.0%
!!! TTTTTTTTATATGAATGAAT+GGG + Chr3:71230138-71230157 None:intergenic 10.0%
!! AAATCTAAATCGTAATTATA+GGG + Chr3:71229568-71229587 None:intergenic 15.0%
!! TAAAATAAGTTTCACAAAAA+AGG + Chr3:71230106-71230125 None:intergenic 15.0%
!! TAAATCTAAATCGTAATTAT+AGG + Chr3:71229569-71229588 None:intergenic 15.0%
!! TCAATTAAATTAACTTTACA+CGG - Chr3:71226673-71226692 MsG0380015511.01.T01:CDS 15.0%
!! TTATGTTAATTGAATTATTG+TGG - Chr3:71226325-71226344 MsG0380015511.01.T01:intron 15.0%
!!! ATCATGTTTTTATAATCTTT+TGG - Chr3:71227405-71227424 MsG0380015511.01.T01:intron 15.0%
!!! ATGTGATTGTTATTTTATTT+TGG - Chr3:71227350-71227369 MsG0380015511.01.T01:intron 15.0%
!!! GTGAAACTTATTTTAAAATT+CGG - Chr3:71230111-71230130 MsG0380015511.01.T01:five_prime_UTR 15.0%
!!! TCATTTTTAATACCATTTTA+TGG - Chr3:71228592-71228611 MsG0380015511.01.T01:intron 15.0%
!!! TGTGATTGTTATTTTATTTT+GGG - Chr3:71227351-71227370 MsG0380015511.01.T01:intron 15.0%
!!! TTTTTTTTTTTTGTGACAAA+CGG + Chr3:71227709-71227728 None:intergenic 15.0%
!! AAAAAAATAGGACTTTAATC+AGG + Chr3:71226275-71226294 None:intergenic 20.0%
!! AAAAAATAGGACTTTAATCA+GGG + Chr3:71226274-71226293 None:intergenic 20.0%
!! AATAGTAATATCTATAAGGT+TGG + Chr3:71229065-71229084 None:intergenic 20.0%
!! AATTACTTTCAATAGAAGAA+TGG + Chr3:71229173-71229192 None:intergenic 20.0%
!! ACAATAAAGTCTATGATATA+GGG + Chr3:71227071-71227090 None:intergenic 20.0%
!! CAAAAACTAACTACTTATTT+CGG + Chr3:71229541-71229560 None:intergenic 20.0%
!! CAACAATAGTAATATCTATA+AGG + Chr3:71229069-71229088 None:intergenic 20.0%
!! CAATTAAATTAACTTTACAC+GGG - Chr3:71226674-71226693 MsG0380015511.01.T01:CDS 20.0%
!! CTTATAGATATTACTATTGT+TGG - Chr3:71229067-71229086 MsG0380015511.01.T01:intron 20.0%
!! GTATTATAAAAATACAAGCT+TGG - Chr3:71230030-71230049 MsG0380015511.01.T01:CDS 20.0%
!! TAAAAATGAATGATTAAAGC+AGG + Chr3:71228581-71228600 None:intergenic 20.0%
!! TCTATAAGCTAGTAAAAATA+GGG - Chr3:71226757-71226776 MsG0380015511.01.T01:intron 20.0%
!! TGCAAAAGAATTTAATGTTA+TGG - Chr3:71229593-71229612 MsG0380015511.01.T01:intron 20.0%
!! TTCTATAAGCTAGTAAAAAT+AGG - Chr3:71226756-71226775 MsG0380015511.01.T01:intron 20.0%
!! TTTAAAAGTTAAGTACCTAA+AGG - Chr3:71228809-71228828 MsG0380015511.01.T01:CDS 20.0%
!!! AAATAAGTAGTTAGTTTTTG+AGG - Chr3:71229541-71229560 MsG0380015511.01.T01:intron 20.0%
!!! ACCATTTTATGGTTTATATT+GGG - Chr3:71228603-71228622 MsG0380015511.01.T01:intron 20.0%
!!! ATGAAATGTTTTCAATTTGA+TGG - Chr3:71227292-71227311 MsG0380015511.01.T01:intron 20.0%
!!! CTTTTTCTATCTCAATATTT+AGG - Chr3:71230066-71230085 MsG0380015511.01.T01:exon 20.0%
!!! GTTATTTTATTTTGGGTTAT+TGG - Chr3:71227358-71227377 MsG0380015511.01.T01:intron 20.0%
!!! TAATTTTACAACACATGTTT+AGG + Chr3:71228906-71228925 None:intergenic 20.0%
!!! TACCATTTTATGGTTTATAT+TGG - Chr3:71228602-71228621 MsG0380015511.01.T01:intron 20.0%
!!! TTTTTGTTGTTAATGTGTTT+TGG - Chr3:71226302-71226321 MsG0380015511.01.T01:intron 20.0%
!!! TTTTTTTTTTTGTGACAAAC+GGG + Chr3:71227708-71227727 None:intergenic 20.0%
! AAAAATTACTTTCAGGAGAT+AGG - Chr3:71228481-71228500 MsG0380015511.01.T01:CDS 25.0%
! AAATTTGAAAAGATTAACCC+TGG - Chr3:71228629-71228648 MsG0380015511.01.T01:intron 25.0%
! AAGAAAAAAATCAAGCTGTA+AGG - Chr3:71229489-71229508 MsG0380015511.01.T01:intron 25.0%
! AATCAGTCTCTGTTAATTAT+AGG + Chr3:71228043-71228062 None:intergenic 25.0%
! AATTTGAAAAGATTAACCCT+GGG - Chr3:71228630-71228649 MsG0380015511.01.T01:intron 25.0%
! AGAAAAAAATCAAGCTGTAA+GGG - Chr3:71229490-71229509 MsG0380015511.01.T01:intron 25.0%
! ATACATATACATGTGTTCAA+AGG - Chr3:71229685-71229704 MsG0380015511.01.T01:intron 25.0%
! ATGAATGGAAATGTGAAATT+TGG + Chr3:71225814-71225833 None:intergenic 25.0%
! ATGATTGAATTTGTAGTGTT+TGG - Chr3:71226574-71226593 MsG0380015511.01.T01:intron 25.0%
! CAAAAAAGAATGAGCAAAAT+TGG + Chr3:71229978-71229997 None:intergenic 25.0%
! CAACAAGTTTAATATTCACA+GGG + Chr3:71227480-71227499 None:intergenic 25.0%
! CAATAAAGTCTATGATATAG+GGG + Chr3:71227070-71227089 None:intergenic 25.0%
! CACAATAAAGTCTATGATAT+AGG + Chr3:71227072-71227091 None:intergenic 25.0%
! CACATATCAACATAAAAAGA+TGG + Chr3:71229719-71229738 None:intergenic 25.0%
! CATCTTATGTTGTAGAAATA+AGG + Chr3:71226444-71226463 None:intergenic 25.0%
! CTTACCAAAAAATTACTTTC+AGG - Chr3:71228474-71228493 MsG0380015511.01.T01:CDS 25.0%
! GTAGTGTTTGGTAAAATTAA+CGG - Chr3:71226586-71226605 MsG0380015511.01.T01:intron 25.0%
! GTTTCCAATATAACACTTTA+CGG - Chr3:71229109-71229128 MsG0380015511.01.T01:intron 25.0%
! TAACAATCACATAACAGAAA+CGG + Chr3:71227342-71227361 None:intergenic 25.0%
! TACAACATAAGATGAAATGA+AGG - Chr3:71226450-71226469 MsG0380015511.01.T01:intron 25.0%
! TAGACAAGTAAACAAAAAAG+TGG + Chr3:71229390-71229409 None:intergenic 25.0%
! TATGTTGATATGTGTATTGA+GGG - Chr3:71229725-71229744 MsG0380015511.01.T01:CDS 25.0%
! TGAATGGAAATGTGAAATTT+GGG + Chr3:71225813-71225832 None:intergenic 25.0%
! TTATGTTGATATGTGTATTG+AGG - Chr3:71229724-71229743 MsG0380015511.01.T01:CDS 25.0%
! TTTCCAATATAACACTTTAC+GGG - Chr3:71229110-71229129 MsG0380015511.01.T01:intron 25.0%
!! ATAGGTTGTGTTATTATCAT+TGG + Chr3:71228025-71228044 None:intergenic 25.0%
!! CCATTTTATGGTTTATATTG+GGG - Chr3:71228604-71228623 MsG0380015511.01.T01:intron 25.0%
!! GGAGTGAAAAATATTTTGTA+AGG - Chr3:71229927-71229946 MsG0380015511.01.T01:CDS 25.0%
!!! ATCTCCTGAAAGTAATTTTT+TGG + Chr3:71228481-71228500 None:intergenic 25.0%
!!! TAATTTTTTGGTAAGAATCC+TGG + Chr3:71228469-71228488 None:intergenic 25.0%
!!! TTATTTTGGGTTATTGGATA+TGG - Chr3:71227364-71227383 MsG0380015511.01.T01:intron 25.0%
AAACAAAAAAGTGGATGGAA+GGG + Chr3:71229381-71229400 None:intergenic 30.0%
AAATGCTAATGACTACAGTT+GGG + Chr3:71228741-71228760 None:intergenic 30.0%
AAATGTGAAATTTGGGAATG+AGG + Chr3:71225806-71225825 None:intergenic 30.0%
AACGGTTAAAGACCTTAATA+TGG + Chr3:71227324-71227343 None:intergenic 30.0%
AAGTATGAATGACTTAAAGC+AGG + Chr3:71228945-71228964 None:intergenic 30.0%
AAGTATTCTGAATGCATACT+TGG - Chr3:71228095-71228114 MsG0380015511.01.T01:intron 30.0%
AAGTTAAGTACCTAAAGGAT+AGG - Chr3:71228814-71228833 MsG0380015511.01.T01:CDS 30.0%
AATGTGAAATTTGGGAATGA+GGG + Chr3:71225805-71225824 None:intergenic 30.0%
ACAATGGTATTTAAGTCTTG+TGG - Chr3:71228542-71228561 MsG0380015511.01.T01:intron 30.0%
ACACACACACCAAAAAAAAA+AGG - Chr3:71228167-71228186 MsG0380015511.01.T01:intron 30.0%
ACCATTATATAACAACTCCA+AGG + Chr3:71229661-71229680 None:intergenic 30.0%
ACCTTGGAGTTGTTATATAA+TGG - Chr3:71229657-71229676 MsG0380015511.01.T01:intron 30.0%
ACTAAATGAGAAGACTTTCT+TGG - Chr3:71227984-71228003 MsG0380015511.01.T01:intron 30.0%
AGAAGATAAAGGATATAGAG+AGG + Chr3:71229335-71229354 None:intergenic 30.0%
AGGATCTTTATGTTCACATT+GGG - Chr3:71226356-71226375 MsG0380015511.01.T01:intron 30.0%
ATAAGCTAACTTATAGCTGA+TGG - Chr3:71226539-71226558 MsG0380015511.01.T01:intron 30.0%
ATATTCAAGCTTGTGAAGAA+AGG - Chr3:71226175-71226194 MsG0380015511.01.T01:intron 30.0%
ATCGTAAGCTTGTCAAAAAA+TGG - Chr3:71227815-71227834 MsG0380015511.01.T01:intron 30.0%
ATGTTGATATGTGTATTGAG+GGG - Chr3:71229726-71229745 MsG0380015511.01.T01:CDS 30.0%
CAAGTAAACAAAAAAGTGGA+TGG + Chr3:71229386-71229405 None:intergenic 30.0%
CATTCAGAATACTTGTCAAT+CGG + Chr3:71228089-71228108 None:intergenic 30.0%
CCCCAATATAAACCATAAAA+TGG + Chr3:71228607-71228626 None:intergenic 30.0%
CTCATTTAGTGCAAAAAGAA+CGG + Chr3:71227974-71227993 None:intergenic 30.0%
GAATTATTGTGGCTATTTGT+AGG - Chr3:71226336-71226355 MsG0380015511.01.T01:intron 30.0%
GATACAACAAGATAATGAAG+AGG - Chr3:71229825-71229844 MsG0380015511.01.T01:CDS 30.0%
GCAACAAGTTTAATATTCAC+AGG + Chr3:71227481-71227500 None:intergenic 30.0%
GTCTTAACATAAATCCTATC+TGG - Chr3:71228775-71228794 MsG0380015511.01.T01:CDS 30.0%
TAAACAAAAAAGTGGATGGA+AGG + Chr3:71229382-71229401 None:intergenic 30.0%
TAAATACCATTGTTAGCTAG+TGG + Chr3:71228535-71228554 None:intergenic 30.0%
TAGGATCTTTATGTTCACAT+TGG - Chr3:71226355-71226374 MsG0380015511.01.T01:intron 30.0%
TATGAAAATGAGCTAGAAAC+AGG - Chr3:71226948-71226967 MsG0380015511.01.T01:intron 30.0%
TCATAGACTTTATTGTGAAC+AGG - Chr3:71227075-71227094 MsG0380015511.01.T01:intron 30.0%
TGACTAGAAAAGATCAGTTT+GGG + Chr3:71226815-71226834 None:intergenic 30.0%
TGTTATTATCATTGGCAACT+TGG + Chr3:71228017-71228036 None:intergenic 30.0%
TTCCAATATAACACTTTACG+GGG - Chr3:71229111-71229130 MsG0380015511.01.T01:intron 30.0%
TTGACTAGAAAAGATCAGTT+TGG + Chr3:71226816-71226835 None:intergenic 30.0%
! AGATGAAATGAAGGTTCTTT+TGG - Chr3:71226459-71226478 MsG0380015511.01.T01:intron 30.0%
! ATTCTAAAAGATCTCCTGAA+CGG - Chr3:71226991-71227010 MsG0380015511.01.T01:intron 30.0%
! ATTTGCATTTGAAGTCCTAT+GGG - Chr3:71229144-71229163 MsG0380015511.01.T01:intron 30.0%
! GAATCAATAGAAAAGCACAA+GGG - Chr3:71229264-71229283 MsG0380015511.01.T01:intron 30.0%
! TATTTTGTTACGATCTTGAC+AGG - Chr3:71229197-71229216 MsG0380015511.01.T01:intron 30.0%
!! AAAGAACGGTTATTTTGTGA+AGG + Chr3:71227960-71227979 None:intergenic 30.0%
!! AGTTGATAAGCTAGCTTATA+GGG - Chr3:71226500-71226519 MsG0380015511.01.T01:intron 30.0%
!! GCTGTTTTCATTAGTTATCT+TGG - Chr3:71226919-71226938 MsG0380015511.01.T01:intron 30.0%
!! TAGTTGATAAGCTAGCTTAT+AGG - Chr3:71226499-71226518 MsG0380015511.01.T01:intron 30.0%
!!! TGGTTCTTGCCTTTTTTTTT+TGG + Chr3:71228179-71228198 None:intergenic 30.0%
!!! TTATAATCTTTTGGCTTTGC+AGG - Chr3:71227414-71227433 MsG0380015511.01.T01:intron 30.0%
!!! TTGGGTTTTGTTGTATGATT+AGG - Chr3:71227655-71227674 MsG0380015511.01.T01:intron 30.0%
AACCTTGAACCTTGATTTAG+AGG - Chr3:71226245-71226264 MsG0380015511.01.T01:intron 35.0%
AACTGAATTGTAGTGAGCAA+GGG - Chr3:71228678-71228697 MsG0380015511.01.T01:CDS 35.0%
AATTGTCCGAACCAAATAGT+CGG - Chr3:71229632-71229651 MsG0380015511.01.T01:intron 35.0%
AGGTTGTGGACATATCTTAA+GGG - Chr3:71226968-71226987 MsG0380015511.01.T01:intron 35.0%
ATAAGCTCATGAGAAAGTGA+CGG - Chr3:71226781-71226800 MsG0380015511.01.T01:intron 35.0%
ATCTTTATGTTCACATTGGG+TGG - Chr3:71226359-71226378 MsG0380015511.01.T01:intron 35.0%
CAACAAGATAATGAAGAGGT+CGG - Chr3:71229829-71229848 MsG0380015511.01.T01:CDS 35.0%
GAAATGCTAATGACTACAGT+TGG + Chr3:71228742-71228761 None:intergenic 35.0%
GATAAAGGATATAGAGAGGA+TGG + Chr3:71229331-71229350 None:intergenic 35.0%
GATGTTGTTGTATTCGAGAA+GGG + Chr3:71226001-71226020 None:intergenic 35.0%
GGCAAAATAGAAACCAAACA+AGG - Chr3:71228281-71228300 MsG0380015511.01.T01:intron 35.0%
GTTAGCAGTCTAATCAAAGT+TGG - Chr3:71226069-71226088 MsG0380015511.01.T01:CDS 35.0%
TACATGCGACATTCCAAATT+CGG + Chr3:71225901-71225920 None:intergenic 35.0%
TACCTCTAAATCAAGGTTCA+AGG + Chr3:71226250-71226269 None:intergenic 35.0%
TCCAATATAACACTTTACGG+GGG - Chr3:71229112-71229131 MsG0380015511.01.T01:intron 35.0%
TGAATTCTCTCTCTGTGTTT+GGG + Chr3:71225843-71225862 None:intergenic 35.0%
TGACCATATTTGCGATACAA+AGG + Chr3:71226385-71226404 None:intergenic 35.0%
TGATGGAGTTCTCCATATTA+AGG - Chr3:71227309-71227328 MsG0380015511.01.T01:intron 35.0%
TGTCTGCTAGTAGAAGATAA+AGG + Chr3:71229346-71229365 None:intergenic 35.0%
TGTTGATATGTGTATTGAGG+GGG - Chr3:71229727-71229746 MsG0380015511.01.T01:CDS 35.0%
TTAAAGCAGGACATTAACGT+TGG + Chr3:71228568-71228587 None:intergenic 35.0%
TTGACAATGCATTGTGATTC+AGG - Chr3:71229759-71229778 MsG0380015511.01.T01:CDS 35.0%
TTTGTCTTGTCTCTTGATTG+TGG - Chr3:71229994-71230013 MsG0380015511.01.T01:CDS 35.0%
! AGAAAAGATCAGTTTGGGTT+TGG + Chr3:71226810-71226829 None:intergenic 35.0%
! CAAATATGGTCATGCTTTTG+AGG - Chr3:71226393-71226412 MsG0380015511.01.T01:intron 35.0%
! CTTCGTGTTGACAAAGAAAA+GGG - Chr3:71226114-71226133 MsG0380015511.01.T01:CDS 35.0%
! GATAGTCTTTTGAGCTGAAT+TGG - Chr3:71227575-71227594 MsG0380015511.01.T01:intron 35.0%
! GATTTGCATTTGAAGTCCTA+TGG - Chr3:71229143-71229162 MsG0380015511.01.T01:intron 35.0%
! GGAATCAATAGAAAAGCACA+AGG - Chr3:71229263-71229282 MsG0380015511.01.T01:intron 35.0%
! GTTGATAAGCTAGCTTATAG+GGG - Chr3:71226501-71226520 MsG0380015511.01.T01:intron 35.0%
! TCTTCGTGTTGACAAAGAAA+AGG - Chr3:71226113-71226132 MsG0380015511.01.T01:CDS 35.0%
! TTCTAAAAGATCTCCTGAAC+GGG - Chr3:71226992-71227011 MsG0380015511.01.T01:intron 35.0%
!! ATTTGGTTCGGACAATTTCT+TGG + Chr3:71229629-71229648 None:intergenic 35.0%
!! TGTTTGGTTTCTATTTTGCC+TGG + Chr3:71228281-71228300 None:intergenic 35.0%
AAAACAGCTCACTACCAGAT+AGG + Chr3:71228792-71228811 None:intergenic 40.0%
AAAATACCCAGAAGTGGACA+TGG - Chr3:71225927-71225946 MsG0380015511.01.T01:three_prime_UTR 40.0%
AACCAAATAGTCGGTAACCT+TGG - Chr3:71229641-71229660 MsG0380015511.01.T01:intron 40.0%
AAGCAAGTGTCAAAAGGTGA+AGG - Chr3:71227859-71227878 MsG0380015511.01.T01:intron 40.0%
AATATAACACTTTACGGGGG+CGG - Chr3:71229115-71229134 MsG0380015511.01.T01:intron 40.0%
AATGAGCTAGAAACAGGTTG+TGG - Chr3:71226954-71226973 MsG0380015511.01.T01:intron 40.0%
ACTGTACTCTCAACCTTGTT+TGG + Chr3:71228297-71228316 None:intergenic 40.0%
AGAGGAAGAAGATACTGGAA+TGG - Chr3:71229870-71229889 MsG0380015511.01.T01:CDS 40.0%
AGTGAAGAGGAAGAAGATAC+TGG - Chr3:71229865-71229884 MsG0380015511.01.T01:CDS 40.0%
ATAGAAGAATGGTTGCCCAT+AGG + Chr3:71229162-71229181 None:intergenic 40.0%
ATATCTGCCCTGAGTTTCAA+TGG + Chr3:71227268-71227287 None:intergenic 40.0%
ATATTGCACCAACCTTGTCA+AGG + Chr3:71227534-71227553 None:intergenic 40.0%
ATGCACATTTCACCTTTGAG+GGG - Chr3:71227598-71227617 MsG0380015511.01.T01:intron 40.0%
CAAGGGTAAACTTACTGTGA+AGG - Chr3:71229281-71229300 MsG0380015511.01.T01:intron 40.0%
CAGGTTGTGGACATATCTTA+AGG - Chr3:71226967-71226986 MsG0380015511.01.T01:intron 40.0%
CGATGTTGTTGTATTCGAGA+AGG + Chr3:71226002-71226021 None:intergenic 40.0%
CTATGATATAGGGGTCTGTT+TGG + Chr3:71227061-71227080 None:intergenic 40.0%
CTCGAATACAACAACATCGA+GGG - Chr3:71226003-71226022 MsG0380015511.01.T01:three_prime_UTR 40.0%
CTGAACTGAACCTATCCTTT+AGG + Chr3:71228827-71228846 None:intergenic 40.0%
GAACTGAATTGTAGTGAGCA+AGG - Chr3:71228677-71228696 MsG0380015511.01.T01:CDS 40.0%
GAGAGAAAGCAAGTGTCAAA+AGG - Chr3:71227853-71227872 MsG0380015511.01.T01:intron 40.0%
GAGGAAGAAGATACTGGAAT+GGG - Chr3:71229871-71229890 MsG0380015511.01.T01:CDS 40.0%
GATGCACATTTCACCTTTGA+GGG - Chr3:71227597-71227616 MsG0380015511.01.T01:intron 40.0%
GCAAGCAAACAGATTGTGTT+TGG - Chr3:71228708-71228727 MsG0380015511.01.T01:CDS 40.0%
GGGATCACTAGTGTTTATAG+TGG - Chr3:71227012-71227031 MsG0380015511.01.T01:intron 40.0%
GTGAATTCTCTCTCTGTGTT+TGG + Chr3:71225844-71225863 None:intergenic 40.0%
GTGTTTGGGTGATGAATGAA+TGG + Chr3:71225829-71225848 None:intergenic 40.0%
GTTGATATGTGTATTGAGGG+GGG - Chr3:71229728-71229747 MsG0380015511.01.T01:CDS 40.0%
TATTGCACCAACCTTGTCAA+GGG + Chr3:71227533-71227552 None:intergenic 40.0%
TCAGGGTTACCTCTAAATCA+AGG + Chr3:71226257-71226276 None:intergenic 40.0%
TCTCGAATACAACAACATCG+AGG - Chr3:71226002-71226021 MsG0380015511.01.T01:three_prime_UTR 40.0%
TCTTGTACTCACGTGTACTT+TGG + Chr3:71228199-71228218 None:intergenic 40.0%
TGAGTGGTAAGCACATAAAG+CGG + Chr3:71227508-71227527 None:intergenic 40.0%
TGCTGTATCTGAAGAAGTGA+AGG - Chr3:71227201-71227220 MsG0380015511.01.T01:intron 40.0%
TGGACAGCATATGACATGTA+TGG - Chr3:71229087-71229106 MsG0380015511.01.T01:intron 40.0%
TGGCCTTTGTATCGCAAATA+TGG - Chr3:71226379-71226398 MsG0380015511.01.T01:intron 40.0%
TTCACTTCTTCAGATACAGC+AGG + Chr3:71227202-71227221 None:intergenic 40.0%
TTCTGCAATGGTTCCGAATT+TGG - Chr3:71225885-71225904 MsG0380015511.01.T01:three_prime_UTR 40.0%
TTGACAGGAGCAAGGAATAT+TGG - Chr3:71229212-71229231 MsG0380015511.01.T01:intron 40.0%
TTGCTACTACTGTACGTTGT+TGG - Chr3:71227628-71227647 MsG0380015511.01.T01:intron 40.0%
! ACAGGCGTTCAAAAGAGTTT+TGG - Chr3:71227093-71227112 MsG0380015511.01.T01:intron 40.0%
! AGGTTACCGACTATTTGGTT+CGG + Chr3:71229641-71229660 None:intergenic 40.0%
! GGACAATGGTAATGCGATAA+CGG - Chr3:71229906-71229925 MsG0380015511.01.T01:CDS 40.0%
!! CACAGCTCATTTTTCTGCAA+TGG - Chr3:71225873-71225892 MsG0380015511.01.T01:three_prime_UTR 40.0%
!! GACCAACTAGTCTTGTGTTA+GGG + Chr3:71227932-71227951 None:intergenic 40.0%
!! TGACCAACTAGTCTTGTGTT+AGG + Chr3:71227933-71227952 None:intergenic 40.0%
!!! TAATCTTTTGGCTTTGCAGG+AGG - Chr3:71227417-71227436 MsG0380015511.01.T01:intron 40.0%
!!! TTTTTTGTGACAAACGGGCT+CGG + Chr3:71227703-71227722 None:intergenic 40.0%
AAACACTAGTGATCCCGTTC+AGG + Chr3:71227008-71227027 None:intergenic 45.0%
AAGATTAACCCTGGGAGCAA+TGG - Chr3:71228638-71228657 MsG0380015511.01.T01:CDS 45.0%
AATCATCTCCATTGCTCCCA+GGG + Chr3:71228649-71228668 None:intergenic 45.0%
ACGCGTGAAATCAAGGAAGT+TGG - Chr3:71227145-71227164 MsG0380015511.01.T01:intron 45.0%
ACTCATACCCTTGACAAGGT+TGG - Chr3:71227523-71227542 MsG0380015511.01.T01:intron 45.0%
ACTGTACGTTGTTGGATCGT+TGG - Chr3:71227636-71227655 MsG0380015511.01.T01:intron 45.0%
AGCAAGTTCATACCCCTCAA+AGG + Chr3:71227613-71227632 None:intergenic 45.0%
AGTGGTAAGCACATAAAGCG+GGG + Chr3:71227506-71227525 None:intergenic 45.0%
ATTACAGCCATGTCCACTTC+TGG + Chr3:71225937-71225956 None:intergenic 45.0%
CAAGATAATGAAGAGGTCGG+AGG - Chr3:71229832-71229851 MsG0380015511.01.T01:CDS 45.0%
CACCCTAACACAAGACTAGT+TGG - Chr3:71227927-71227946 MsG0380015511.01.T01:intron 45.0%
CCAAAAAACAGCAACTCCGA+GGG - Chr3:71228244-71228263 MsG0380015511.01.T01:intron 45.0%
CCACATCCACTAGCTAACAA+TGG - Chr3:71228526-71228545 MsG0380015511.01.T01:intron 45.0%
CGAAGCAAAATACCCAGAAG+TGG - Chr3:71225921-71225940 MsG0380015511.01.T01:three_prime_UTR 45.0%
CTGTACGTTGTTGGATCGTT+GGG - Chr3:71227637-71227656 MsG0380015511.01.T01:intron 45.0%
GAGTGGTAAGCACATAAAGC+GGG + Chr3:71227507-71227526 None:intergenic 45.0%
GGACATGGCTGTAATGATAC+AGG - Chr3:71225942-71225961 MsG0380015511.01.T01:three_prime_UTR 45.0%
GGATGCACATTTCACCTTTG+AGG - Chr3:71227596-71227615 MsG0380015511.01.T01:intron 45.0%
GTCAAGAACATCGCAGACAT+GGG - Chr3:71225964-71225983 MsG0380015511.01.T01:three_prime_UTR 45.0%
TACCACTCATACCCTTGACA+AGG - Chr3:71227519-71227538 MsG0380015511.01.T01:intron 45.0%
TCAACACGAAGAACCATCAC+CGG + Chr3:71226105-71226124 None:intergenic 45.0%
TCCTTGCACCCATTACAAGT+GGG + Chr3:71228443-71228462 None:intergenic 45.0%
TGAGAGAACCACCAAACAAG+AGG - Chr3:71228330-71228349 MsG0380015511.01.T01:intron 45.0%
TGATTCCATGCAACAAGCGA+TGG + Chr3:71229250-71229269 None:intergenic 45.0%
TGGGAGCAATGGAGATGATT+GGG - Chr3:71228649-71228668 MsG0380015511.01.T01:CDS 45.0%
TTACAGCCATGTCCACTTCT+GGG + Chr3:71225936-71225955 None:intergenic 45.0%
TTACGATCTTGACAGGAGCA+AGG - Chr3:71229204-71229223 MsG0380015511.01.T01:intron 45.0%
TTAGTCACTTCTTGCCCATC+AGG + Chr3:71227172-71227191 None:intergenic 45.0%
TTGCGCTACCCACTTGTAAT+GGG - Chr3:71228432-71228451 MsG0380015511.01.T01:CDS 45.0%
! AACCTTGTCAAGGGTATGAG+TGG + Chr3:71227524-71227543 None:intergenic 45.0%
! AGCGCAACCTGTTTTCTCAT+GGG + Chr3:71228419-71228438 None:intergenic 45.0%
! ATCAAGGAAGTTGGTCCTGA+TGG - Chr3:71227154-71227173 MsG0380015511.01.T01:intron 45.0%
! CAAAGTTGGTCGAATCGAAC+CGG - Chr3:71226083-71226102 MsG0380015511.01.T01:CDS 45.0%
! CCATTGTTAGCTAGTGGATG+TGG + Chr3:71228529-71228548 None:intergenic 45.0%
! CTATTTTGCCTGGTTGCTGA+CGG + Chr3:71228271-71228290 None:intergenic 45.0%
! CTCCAAGGTTACCGACTATT+TGG + Chr3:71229646-71229665 None:intergenic 45.0%
! GCCCCCGTAAAGTGTTATAT+TGG + Chr3:71229116-71229135 None:intergenic 45.0%
! TAGCGCAACCTGTTTTCTCA+TGG + Chr3:71228420-71228439 None:intergenic 45.0%
! TCAAGGAAGTTGGTCCTGAT+GGG - Chr3:71227155-71227174 MsG0380015511.01.T01:intron 45.0%
! TGATGGGCAAGAAGTGACTA+AGG - Chr3:71227171-71227190 MsG0380015511.01.T01:intron 45.0%
! TGTGGGTCACTGTTGTGTTT+TGG + Chr3:71228368-71228387 None:intergenic 45.0%
! TTGGTGGTTCTCTCAGTACA+GGG + Chr3:71228325-71228344 None:intergenic 45.0%
! TTTGGTGGTTCTCTCAGTAC+AGG + Chr3:71228326-71228345 None:intergenic 45.0%
!!! AGTTTTGGCTGATCCTGATG+CGG - Chr3:71227108-71227127 MsG0380015511.01.T01:intron 45.0%
!!! TCACTGTTGTGTTTTGGCCT+GGG + Chr3:71228362-71228381 None:intergenic 45.0%
!! AAAAAATAATTAATTATTGA+AGG + Chr3:71229447-71229466 None:intergenic 5.0%
!! AAATATTAAAATTTATGTTA+GGG + Chr3:71227902-71227921 None:intergenic 5.0%
!!! TATTTTTTTTTAAAAACAAA+TGG + Chr3:71227790-71227809 None:intergenic 5.0%
!!! TTTTTTTAAAAAAAAAAAAG+TGG + Chr3:71227740-71227759 None:intergenic 5.0%
AATCCGACGACGAGAAAGCT+CGG + Chr3:71226043-71226062 None:intergenic 50.0%
AGAAGATACTGGAATGGGCG+AGG - Chr3:71229876-71229895 MsG0380015511.01.T01:CDS 50.0%
AGGCGATGATGACAGTGAAG+AGG - Chr3:71229852-71229871 MsG0380015511.01.T01:CDS 50.0%
ATGGCGACACTCACCACTTT+GGG + Chr3:71229312-71229331 None:intergenic 50.0%
CAATCATCTCCATTGCTCCC+AGG + Chr3:71228650-71228669 None:intergenic 50.0%
CTCCTTGCACCCATTACAAG+TGG + Chr3:71228444-71228463 None:intergenic 50.0%
CTGGGAGCAATGGAGATGAT+TGG - Chr3:71228648-71228667 MsG0380015511.01.T01:CDS 50.0%
GCCAAAAAACAGCAACTCCG+AGG - Chr3:71228243-71228262 MsG0380015511.01.T01:intron 50.0%
GGTCAAGAACATCGCAGACA+TGG - Chr3:71225963-71225982 MsG0380015511.01.T01:three_prime_UTR 50.0%
GTGGTAAGCACATAAAGCGG+GGG + Chr3:71227505-71227524 None:intergenic 50.0%
GTTGCGCTACCCACTTGTAA+TGG - Chr3:71228431-71228450 MsG0380015511.01.T01:CDS 50.0%
TACTGGCCCCATGAGAAAAC+AGG - Chr3:71228409-71228428 MsG0380015511.01.T01:intron 50.0%
TCCCCAGCCATTGAAACTCA+GGG - Chr3:71227258-71227277 MsG0380015511.01.T01:intron 50.0%
TGCCCTGAGTTTCAATGGCT+GGG + Chr3:71227263-71227282 None:intergenic 50.0%
TGGGCAAGAAGTGACTAAGG+TGG - Chr3:71227174-71227193 MsG0380015511.01.T01:intron 50.0%
TGGTTCTCTCAGTACAGGGA+TGG + Chr3:71228321-71228340 None:intergenic 50.0%
TGTGAAGGAGCAACCCAAAG+TGG - Chr3:71229296-71229315 MsG0380015511.01.T01:intron 50.0%
! GAATGCCATCGCTTGTTGCA+TGG - Chr3:71229242-71229261 MsG0380015511.01.T01:intron 50.0%
! GCGCAACCTGTTTTCTCATG+GGG + Chr3:71228418-71228437 None:intergenic 50.0%
!! ACCCACTTGTAATGGGTGCA+AGG - Chr3:71228439-71228458 MsG0380015511.01.T01:CDS 50.0%
!!! CCCTCGGAGTTGCTGTTTTT+TGG + Chr3:71228247-71228266 None:intergenic 50.0%
!!! GTCACTGTTGTGTTTTGGCC+TGG + Chr3:71228363-71228382 None:intergenic 50.0%
AGTGCGCTCAAAACCGCATC+AGG + Chr3:71227124-71227143 None:intergenic 55.0%
AGTGGATGTGGTGCAGTTGG+TGG + Chr3:71228517-71228536 None:intergenic 55.0%
ATGGGGCCAGTAGAGATCTG+CGG + Chr3:71228401-71228420 None:intergenic 55.0%
CAAACAAGAGGCAACCACCC+AGG - Chr3:71228342-71228361 MsG0380015511.01.T01:intron 55.0%
CCAATCCCGCAGATCTCTAC+TGG - Chr3:71228392-71228411 MsG0380015511.01.T01:intron 55.0%
CCAGTAGAGATCTGCGGGAT+TGG + Chr3:71228395-71228414 None:intergenic 55.0%
CGCACTCACGCGTGAAATCA+AGG - Chr3:71227138-71227157 MsG0380015511.01.T01:intron 55.0%
CTCCCCAGCCATTGAAACTC+AGG - Chr3:71227257-71227276 MsG0380015511.01.T01:intron 55.0%
CTGCCCTGAGTTTCAATGGC+TGG + Chr3:71227264-71227283 None:intergenic 55.0%
CTGGGTGGTTGCCTCTTGTT+TGG + Chr3:71228344-71228363 None:intergenic 55.0%
GATGGCGACACTCACCACTT+TGG + Chr3:71229313-71229332 None:intergenic 55.0%
GCCCTGAGTTTCAATGGCTG+GGG + Chr3:71227262-71227281 None:intergenic 55.0%
TCTCCGAGCTTTCTCGTCGT+CGG - Chr3:71226037-71226056 MsG0380015511.01.T01:CDS 55.0%
TGGTCGAATCGAACCGGTGA+TGG - Chr3:71226089-71226108 MsG0380015511.01.T01:CDS 55.0%
TTTGCAGGAGGCAATGCGGA+AGG - Chr3:71227429-71227448 MsG0380015511.01.T01:intron 55.0%
! ATCTGCGGGATTGGCATGTG+TGG + Chr3:71228386-71228405 None:intergenic 55.0%
! GCTAGTGGATGTGGTGCAGT+TGG + Chr3:71228520-71228539 None:intergenic 55.0%
! GGCGAGGTTGATCTGGACAA+TGG - Chr3:71229892-71229911 MsG0380015511.01.T01:CDS 55.0%
! GGTGGTTGCCTCTTGTTTGG+TGG + Chr3:71228341-71228360 None:intergenic 55.0%
! GTGACAAACGGGCTCGGAAT+AGG + Chr3:71227697-71227716 None:intergenic 55.0%
! TAATGGGTGCAAGGAGAGCC+AGG - Chr3:71228448-71228467 MsG0380015511.01.T01:CDS 55.0%
! TCTGCGGGATTGGCATGTGT+GGG + Chr3:71228385-71228404 None:intergenic 55.0%
! TGGAATGGGCGAGGTTGATC+TGG - Chr3:71229885-71229904 MsG0380015511.01.T01:CDS 55.0%
! TGGCTTTGCAGGAGGCAATG+CGG - Chr3:71227425-71227444 MsG0380015511.01.T01:intron 55.0%
!! ATGTGGTGCAGTTGGTGGAC+AGG + Chr3:71228512-71228531 None:intergenic 55.0%
!!! CTGTTGTGTTTTGGCCTGGG+TGG + Chr3:71228359-71228378 None:intergenic 55.0%
ATGCGGAAGGCTGAAGCTGC+TGG - Chr3:71227442-71227461 MsG0380015511.01.T01:intron 60.0%
TGGGGCCAGTAGAGATCTGC+GGG + Chr3:71228400-71228419 None:intergenic 60.0%
CCTGGTTGCTGACGGTCCCT+CGG + Chr3:71228263-71228282 None:intergenic 65.0%
CCGAGGGACCGTCAGCAACC+AGG - Chr3:71228260-71228279 MsG0380015511.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 71225794 71230167 71225794 ID=MsG0380015511.01;Name=MsG0380015511.01
Chr3 mRNA 71225794 71230167 71225794 ID=MsG0380015511.01.T01;Parent=MsG0380015511.01;Name=MsG0380015511.01.T01;_AED=0.46;_eAED=0.46;_QI=98|1|1|1|1|1|6|234|340
Chr3 exon 71225794 71226180 71225794 ID=MsG0380015511.01.T01:exon:577;Parent=MsG0380015511.01.T01
Chr3 exon 71226644 71226742 71226644 ID=MsG0380015511.01.T01:exon:576;Parent=MsG0380015511.01.T01
Chr3 exon 71228421 71228525 71228421 ID=MsG0380015511.01.T01:exon:575;Parent=MsG0380015511.01.T01
Chr3 exon 71228631 71228864 71228631 ID=MsG0380015511.01.T01:exon:574;Parent=MsG0380015511.01.T01
Chr3 exon 71229547 71229603 71229547 ID=MsG0380015511.01.T01:exon:573;Parent=MsG0380015511.01.T01
Chr3 exon 71229695 71230167 71229695 ID=MsG0380015511.01.T01:exon:572;Parent=MsG0380015511.01.T01
Chr3 five_prime_UTR 71230070 71230167 71230070 ID=MsG0380015511.01.T01:five_prime_utr;Parent=MsG0380015511.01.T01
Chr3 CDS 71229695 71230069 71229695 ID=MsG0380015511.01.T01:cds;Parent=MsG0380015511.01.T01
Chr3 CDS 71229547 71229603 71229547 ID=MsG0380015511.01.T01:cds;Parent=MsG0380015511.01.T01
Chr3 CDS 71228631 71228864 71228631 ID=MsG0380015511.01.T01:cds;Parent=MsG0380015511.01.T01
Chr3 CDS 71228421 71228525 71228421 ID=MsG0380015511.01.T01:cds;Parent=MsG0380015511.01.T01
Chr3 CDS 71226644 71226742 71226644 ID=MsG0380015511.01.T01:cds;Parent=MsG0380015511.01.T01
Chr3 CDS 71226028 71226180 71226028 ID=MsG0380015511.01.T01:cds;Parent=MsG0380015511.01.T01
Chr3 three_prime_UTR 71225794 71226027 71225794 ID=MsG0380015511.01.T01:three_prime_utr;Parent=MsG0380015511.01.T01
Gene Sequence

>MsG0380015511.01.T01

ATGGTTCCGAATTTGGAATGTCGCATGTACGAAGCAAAATACCCAGAAGTGGACATGGCTGTAATGATACAGGTCAAGAACATCGCAGACATGGGTGCTTACGTGTCCCTTCTCGAATACAACAACATCGAGGGTATGATTCTATTCTCCGAGCTTTCTCGTCGTCGGATTCGTAGTGTTAGCAGTCTAATCAAAGTTGGTCGAATCGAACCGGTGATGGTTCTTCGTGTTGACAAAGAAAAGGGTTACATCGATCTCAGTAAACGTAGAGTTTCTGAAGAAGATATTCAAGCTTGTGAAGAAAGGTATAATAAGAGTAAACTTGTGCATTCTATTATGCGTCATGTTGCTGAAACCTTGAACCTTGATTTAGAGGATCTTTATGTTCACATTGGGTGGCCTTTGTATCGCAAATATGGTCATGCTTTTGAGGCGTTCAAAAGAGTTTTGGCTGATCCTGATGCGGTTTTGAGCGCACTCACGCGTGAAATCAAGGAAGTTGGTCCTGATGGGCAAGAAGTGACTAAGGTGGTACCTGCTGTATCTGAAGAAGTGAAGGAATCTCTACTGATGAATATTAGAAGACGAATGACTCCCCAGCCATTGAAACTCAGGGCAGATATTGAAATGAAATGTTTTCAATTTGATGGAGTTCTCCATATTAAGGAGGCAATGCGGAAGGCTGAAGCTGCTGGAAATGATGACTGCCCTGTGAATATTAAACTTGTTGCTCCCCCGCTTTATGTGCTTACCACTCATACCCTTGACAAGGAGCAAGGAATATTGGTTCTCAAGAATGCCATCGCTTGTTGCATGGAATCAATAGAAAAGCACAAGGGTAAACTTACTGTGAAGGAGCAACCCAAAGTGGTGAGTGAACGTGATGATAAACTGCTTATTGATATCATGAATAAGATACAACAAGATAATGAAGAGGTCGGAGGCGATGATGACAGTGAAGAGGAAGAAGATACTGGAATGGGCGAGGTTGATCTGGACAATGGTAATGCGATAACGGAGTGA
Protein sequence

>MsG0380015511.01.T01

MVPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLNLDLEDLYVHIGWPLYRKYGHAFEAFKRVLADPDAVLSALTREIKEVGPDGQEVTKVVPAVSEEVKESLLMNIRRRMTPQPLKLRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVNIKLVAPPLYVLTTHTLDKEQGILVLKNAIACCMESIEKHKGKLTVKEQPKVVSERDDKLLIDIMNKIQQDNEEVGGDDDSEEEEDTGMGEVDLDNGNAITE*