AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015844.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015844.01.T01 MTR_3g078570 70.602 415 27 8 1 320 1 415 0.0 529
MsG0380015844.01.T01 MTR_3g078570 70.133 375 30 7 1 293 1 375 2.64e-172 483
MsG0380015844.01.T01 MTR_6g008840 68.201 239 48 3 110 320 176 414 1.45e-105 315
MsG0380015844.01.T01 MTR_6g008840 83.193 119 19 1 4 121 3 121 2.81e-65 211
MsG0380015844.01.T01 MTR_4g071670 62.712 236 42 4 113 320 3 220 1.86e-93 277
MsG0380015844.01.T01 MTR_3g069070 26.260 377 181 10 10 314 3 354 1.03e-30 119
MsG0380015844.01.T01 MTR_5g080770 27.056 377 178 12 10 314 3 354 3.87e-28 112
MsG0380015844.01.T01 MTR_3g069070 29.524 210 117 4 113 314 109 295 5.39e-23 97.1
MsG0380015844.01.T01 MTR_4g133690 32.044 181 107 4 139 311 122 294 1.48e-21 93.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015844.01.T01 AT2G04650 58.867 406 79 8 3 320 1 406 1.86e-154 439
MsG0380015844.01.T01 AT2G04650 57.841 389 76 8 20 320 6 394 5.26e-143 409
MsG0380015844.01.T01 AT1G74910 67.227 238 51 3 110 320 178 415 8.80e-105 313
MsG0380015844.01.T01 AT1G74910 80.508 118 22 1 5 121 6 123 4.42e-64 208
MsG0380015844.01.T01 AT1G74910 67.227 238 51 3 110 320 178 415 8.80e-105 313
MsG0380015844.01.T01 AT1G74910 80.508 118 22 1 5 121 6 123 4.42e-64 208
MsG0380015844.01.T01 AT1G74910 69.271 192 45 2 110 287 178 369 2.45e-89 272
MsG0380015844.01.T01 AT1G74910 80.508 118 22 1 5 121 6 123 3.71e-64 207
MsG0380015844.01.T01 AT2G39770 24.866 374 184 10 10 311 3 351 1.51e-26 107
MsG0380015844.01.T01 AT2G39770 24.866 374 184 10 10 311 3 351 1.51e-26 107
MsG0380015844.01.T01 AT2G39770 24.866 374 184 10 10 311 3 351 1.51e-26 107
MsG0380015844.01.T01 AT4G30570 31.068 206 111 4 113 310 149 331 2.50e-22 95.9
MsG0380015844.01.T01 AT3G55590 28.641 206 116 5 113 310 171 353 1.14e-17 83.2

Find 106 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATGAAACCATGGATTTC+TGG 0.172082 3:+75808346 MsG0380015844.01.T01:CDS
TTATGCAACATTAAATATTT+TGG 0.209647 3:-75810642 None:intergenic
ATCTTGAACGCCGACATTTA+AGG 0.216010 3:-75810493 None:intergenic
CCAACCTAACAGGGAGTTTA+AGG 0.219086 3:-75804768 None:intergenic
TACCATCTCCATTTGCTAAT+AGG 0.276175 3:-75808526 None:intergenic
AGATAAATCCGAGCTAAATT+AGG 0.306173 3:-75804688 None:intergenic
TCTCCATTTGCTAATAGGTT+AGG 0.325571 3:-75808521 None:intergenic
GCTAATGGAAAGAGTGGTTT+AGG 0.338257 3:-75804533 None:intergenic
GGCATGAAATCCAACCTAAC+AGG 0.341961 3:-75804778 None:intergenic
TTAGGAATGTTGAATGATAA+TGG 0.346235 3:-75804515 None:intergenic
GATATCCTCTCACCTCTTGC+AGG 0.350385 3:+75808306 MsG0380015844.01.T01:CDS
TATACACACCACAGTTTATA+AGG 0.358814 3:-75806063 None:intergenic
GTTGTTCTTCATGCAATTGT+TGG 0.365369 3:+75809185 MsG0380015844.01.T01:CDS
CTCCATTTGCTAATAGGTTA+GGG 0.383333 3:-75808520 None:intergenic
GTTCATGTTGTCAAATTGTT+TGG 0.386400 3:+75810618 MsG0380015844.01.T01:three_prime_UTR
TTAAAATTTCCAAACTTGCC+TGG 0.390788 3:-75809241 None:intergenic
TCAATGGCAGTAAAGATATC+TGG 0.400157 3:-75806094 None:intergenic
ACGACCTTAAACTCCCTGTT+AGG 0.403314 3:+75804764 MsG0380015844.01.T01:CDS
AAACCACTCTTTCCATTAGC+TGG 0.410401 3:+75804536 MsG0380015844.01.T01:CDS
GACAAGCCTCATGGTTCTGC+TGG 0.416830 3:+75805340 MsG0380015844.01.T01:CDS
TGGACGGAATCGAGTGCCTT+TGG 0.418152 3:-75804495 None:intergenic
TGGACGATGGGCACGTGTCC+AGG 0.425264 3:+75809223 MsG0380015844.01.T01:CDS
TAGAACACGTCCTCTGCTCT+TGG 0.434325 3:+75810528 MsG0380015844.01.T01:exon
ATATGAAACCATGGATTTCT+GGG 0.436038 3:+75808347 MsG0380015844.01.T01:CDS
ACCATGGGTTGTCCAGCTAA+TGG 0.441231 3:-75804548 None:intergenic
TTAGCTCGGATTTATCTCAT+TGG 0.448196 3:+75804694 MsG0380015844.01.T01:CDS
CCTTGATTTCAACATCATCA+AGG 0.452782 3:-75809077 None:intergenic
TGGGAACAAATCAAAACTCC+TGG 0.456084 3:+75808366 MsG0380015844.01.T01:CDS
ATTAAGAAAGCCTACATCAT+TGG 0.457333 3:+75808548 MsG0380015844.01.T01:CDS
GAGTTTAAGGTCGTTGGAGA+TGG 0.461406 3:-75804755 None:intergenic
TAAACTAGATATTAAACATA+AGG 0.466300 3:-75810573 None:intergenic
CTCAGATTCCTAATTTAGCT+CGG 0.466843 3:+75804680 MsG0380015844.01.T01:intron
GAGAGTTGTGGCGGTTATCA+TGG 0.469516 3:+75804460 MsG0380015844.01.T01:CDS
ATGGTATATTAGATACTTGA+AGG 0.470369 3:+75805315 MsG0380015844.01.T01:intron
CAGAATGTCCATAAAATGTT+CGG 0.473623 3:+75808466 MsG0380015844.01.T01:intron
AACAGGGAGTTTAAGGTCGT+TGG 0.480946 3:-75804761 None:intergenic
ATATCTGCAAATGCTCGTAT+AGG 0.483166 3:+75809024 MsG0380015844.01.T01:CDS
AGATATCTTTACTGCCATTG+AGG 0.489647 3:+75806096 MsG0380015844.01.T01:CDS
TGTCATCATGGAGGAGGATC+CGG 0.492171 3:+75805384 MsG0380015844.01.T01:CDS
TCCCCTAACCTATTAGCAAA+TGG 0.493147 3:+75808518 MsG0380015844.01.T01:CDS
GATATCTTTACTGCCATTGA+GGG 0.493889 3:+75806097 MsG0380015844.01.T01:CDS
ATTGCGGATCTCGAATAAGA+TGG 0.502095 3:+75804424 MsG0380015844.01.T01:exon
CTGAGAAGAAACACCCTCAA+TGG 0.504733 3:-75806110 None:intergenic
GTTGTGGCGGTTATCATGGT+TGG 0.505551 3:+75804464 MsG0380015844.01.T01:CDS
GACGGATGCACCTTTGCTGA+TGG 0.506224 3:-75808587 None:intergenic
AAGCCTCATGGTTCTGCTGG+TGG 0.514794 3:+75805343 MsG0380015844.01.T01:CDS
TCCATTAGCTGGACAACCCA+TGG 0.516294 3:+75804547 MsG0380015844.01.T01:CDS
CATTTAAGGTCTTGTGTGGA+AGG 0.516494 3:-75810479 None:intergenic
ATCTGTTGCCGTTGAGGATG+AGG 0.520316 3:+75810434 MsG0380015844.01.T01:CDS
TTCTTCATGCAATTGTTGGA+TGG 0.524578 3:+75809189 MsG0380015844.01.T01:CDS
AACTGTTTCTTCCCTGCAAG+AGG 0.524841 3:-75808318 None:intergenic
GAAATCCTCCATTGGACGAT+GGG 0.528328 3:+75809211 MsG0380015844.01.T01:CDS
ACGGAATCGAGTGCCTTTGG+TGG 0.538279 3:-75804492 None:intergenic
ATAAACATCACCAATGATGT+AGG 0.540713 3:-75808558 None:intergenic
GTGGCGGTTATCATGGTTGG+AGG 0.543279 3:+75804467 MsG0380015844.01.T01:CDS
GCAAATGCTCGTATAGGAGC+TGG 0.550558 3:+75809030 MsG0380015844.01.T01:CDS
TGCCGTTGAGGATGAGGTAG+TGG 0.555931 3:+75810440 MsG0380015844.01.T01:CDS
GAGATCCGCAATGAAGATGA+AGG 0.558619 3:-75804413 None:intergenic
GTTGGATGGAAATCCTCCAT+TGG 0.560456 3:+75809203 MsG0380015844.01.T01:CDS
ACCGGCGAATTATGTCAGAT+TGG 0.563640 3:+75808278 MsG0380015844.01.T01:CDS
GACACGTGCCCATCGTCCAA+TGG 0.566978 3:-75809219 None:intergenic
TAACTTCAAAGATGTCATCA+TGG 0.567385 3:+75805372 MsG0380015844.01.T01:CDS
GTGGTTGAACAGATTGGTCC+TGG 0.568136 3:+75808994 MsG0380015844.01.T01:intron
CAAAGATGTCATCATGGAGG+AGG 0.569219 3:+75805378 MsG0380015844.01.T01:CDS
TTTGCAGATATTGACACGCC+AGG 0.572563 3:-75809012 None:intergenic
TTGCGGATCTCGAATAAGAT+GGG 0.573422 3:+75804425 MsG0380015844.01.T01:exon
CGGAATCGAGTGCCTTTGGT+GGG 0.578452 3:-75804491 None:intergenic
GTTCTTCTGTAGGAGTCTAC+CGG 0.579815 3:+75808260 MsG0380015844.01.T01:CDS
ACGGATGCACCTTTGCTGAT+GGG 0.584982 3:-75808586 None:intergenic
GAATGTTGAATGATAATGGA+CGG 0.587591 3:-75804511 None:intergenic
AGGTGAATCTGTTGCCGTTG+AGG 0.589560 3:+75810428 MsG0380015844.01.T01:intron
GGGAACAAATCAAAACTCCT+GGG 0.589638 3:+75808367 MsG0380015844.01.T01:CDS
GGAAATCCTCCATTGGACGA+TGG 0.596829 3:+75809210 MsG0380015844.01.T01:CDS
CCGACATTTAAGGTCTTGTG+TGG 0.598385 3:-75810483 None:intergenic
TGAATATTAACCTTTGCAGA+CGG 0.603189 3:-75808605 None:intergenic
GCGAAATTGTGAAAGATACA+AGG 0.603731 3:-75808489 None:intergenic
GCATGAAATCCAACCTAACA+GGG 0.605620 3:-75804777 None:intergenic
AACCTATTAGCAAATGGAGA+TGG 0.606606 3:+75808524 MsG0380015844.01.T01:CDS
AAAGGTGCATCCGTCTGCAA+AGG 0.606718 3:+75808595 MsG0380015844.01.T01:CDS
TGTCCAGCTAATGGAAAGAG+TGG 0.609015 3:-75804539 None:intergenic
ATATCCTCTCACCTCTTGCA+GGG 0.611025 3:+75808307 MsG0380015844.01.T01:CDS
TTATATTCACCCATCAGCAA+AGG 0.612901 3:+75808577 MsG0380015844.01.T01:CDS
GATTTGTTCCCAGAAATCCA+TGG 0.614324 3:-75808355 None:intergenic
TTGAAGGAGGACAAGCCTCA+TGG 0.616152 3:+75805331 MsG0380015844.01.T01:CDS
TCCAATCTGACATAATTCGC+CGG 0.617056 3:-75808279 None:intergenic
TCTTCCCTGCAAGAGGTGAG+AGG 0.617718 3:-75808311 None:intergenic
CTAATAGGTTAGGGGATGTG+TGG 0.618342 3:-75808511 None:intergenic
AACCACTACCTCATCCTCAA+CGG 0.619133 3:-75810442 None:intergenic
TCCATTTGCTAATAGGTTAG+GGG 0.621385 3:-75808519 None:intergenic
GTTGTATATATATGAAACCA+TGG 0.622029 3:+75808338 MsG0380015844.01.T01:CDS
CATATCCTTCATCTTCATTG+CGG 0.623922 3:+75804408 MsG0380015844.01.T01:five_prime_UTR
AGAGATTGGATGATGAACCA+TGG 0.625691 3:-75804564 None:intergenic
TGCAGAAGAGAGAGTTGTGG+CGG 0.627371 3:+75804451 MsG0380015844.01.T01:CDS
ATTCAGAAGAGTTCTTCTGT+AGG 0.628588 3:+75808250 MsG0380015844.01.T01:intron
GAGATTGGATGATGAACCAT+GGG 0.630585 3:-75804563 None:intergenic
TTGAGGGTGTTTCTTCTCAG+CGG 0.638549 3:+75806113 MsG0380015844.01.T01:CDS
CCACACAAGACCTTAAATGT+CGG 0.639985 3:+75810483 MsG0380015844.01.T01:CDS
TCTTCTCAGCGGAAAGACAG+AGG 0.647631 3:+75806124 MsG0380015844.01.T01:CDS
GAGTTTCAGAAATTACAATG+AGG 0.648272 3:-75804386 None:intergenic
ACGTGCCCATCGTCCAATGG+AGG 0.649101 3:-75809216 None:intergenic
ATGGTTGGAGGACCCACCAA+AGG 0.659804 3:+75804479 MsG0380015844.01.T01:CDS
GTTAGTGACCTTATAAACTG+TGG 0.686135 3:+75806055 MsG0380015844.01.T01:CDS
GTATATTAGATACTTGAAGG+AGG 0.708091 3:+75805318 MsG0380015844.01.T01:intron
CTTCAAAGATGTCATCATGG+AGG 0.716377 3:+75805375 MsG0380015844.01.T01:CDS
AATTGCAGAAGAGAGAGTTG+TGG 0.716827 3:+75804448 MsG0380015844.01.T01:CDS
AGACCACCAGCAGAACCATG+AGG 0.741974 3:-75805346 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATGAAGAAATTAAA+AGG - Chr3:75805422-75805441 None:intergenic 10.0%
!!! ATTAACTAAGAATAATTTTT+GGG + Chr3:75806284-75806303 MsG0380015844.01.T01:intron 10.0%
!!! TATTAACTAAGAATAATTTT+TGG + Chr3:75806283-75806302 MsG0380015844.01.T01:intron 10.0%
!!! TATTATTTTGTTTTATAGTA+GGG - Chr3:75807770-75807789 None:intergenic 10.0%
!!! TTATTATTTTGTTTTATAGT+AGG - Chr3:75807771-75807790 None:intergenic 10.0%
!!! TTTTTTTTTTTGTTTTCAAT+AGG - Chr3:75809608-75809627 None:intergenic 10.0%
!! AACAAGATATAAGATAATTA+TGG - Chr3:75810131-75810150 None:intergenic 15.0%
!! ACAAGATATAAGATAATTAT+GGG - Chr3:75810130-75810149 None:intergenic 15.0%
!! TAAAAGGATAATATAATAAC+CGG - Chr3:75805406-75805425 None:intergenic 15.0%
!! TAAAATTGACATTTATAATC+TGG - Chr3:75807526-75807545 None:intergenic 15.0%
!! TAAACTAGATATTAAACATA+AGG - Chr3:75810576-75810595 None:intergenic 15.0%
!! TGAAGATATTCTTATATTTA+AGG - Chr3:75810036-75810055 None:intergenic 15.0%
!! TGTTATGAGTAAAAAATATT+AGG - Chr3:75808710-75808729 None:intergenic 15.0%
!!! ATCATGAGTTTTTTTTTTTT+TGG - Chr3:75810300-75810319 None:intergenic 15.0%
!!! TAAGTTTAGAATATTTAACT+TGG - Chr3:75807044-75807063 None:intergenic 15.0%
!!! TATTTGGAATAAAATCTTTA+GGG + Chr3:75806861-75806880 MsG0380015844.01.T01:intron 15.0%
!!! TTATGCAACATTAAATATTT+TGG - Chr3:75810645-75810664 None:intergenic 15.0%
!!! TTTTAAATATTTCATCTTAC+AGG + Chr3:75809154-75809173 MsG0380015844.01.T01:intron 15.0%
!! AAAGAAAATGATGAAGAAAA+TGG - Chr3:75807878-75807897 MsG0380015845.01.T01:CDS 20.0%
!! AATAAAAGGAATGTAAAGAT+AGG - Chr3:75809876-75809895 None:intergenic 20.0%
!! AATAAGAGCAGAAAAAAATT+AGG - Chr3:75805260-75805279 None:intergenic 20.0%
!! AATCGAGTTTATATATTTAG+AGG + Chr3:75810326-75810345 MsG0380015844.01.T01:intron 20.0%
!! GAAATGTATAAACTAATTCA+GGG + Chr3:75809911-75809930 MsG0380015844.01.T01:intron 20.0%
!! GATATTCTTATATTTAAGGA+CGG - Chr3:75810032-75810051 None:intergenic 20.0%
!! TATATGATTGTCAACAATAT+TGG + Chr3:75806665-75806684 MsG0380015844.01.T01:intron 20.0%
!! TCCAAATCAAAAATACATTT+GGG + Chr3:75807732-75807751 MsG0380015844.01.T01:intron 20.0%
!! TGAAATGTATAAACTAATTC+AGG + Chr3:75809910-75809929 MsG0380015844.01.T01:intron 20.0%
!! TTAATTGATGCATATCATAT+AGG + Chr3:75808856-75808875 MsG0380015844.01.T01:intron 20.0%
!! TTCACTCAAAAAGATAAAAT+AGG - Chr3:75808913-75808932 None:intergenic 20.0%
!!! ACTAAGAAATAAAGTATTTC+TGG + Chr3:75810688-75810707 MsG0380015844.01.T01:three_prime_UTR 20.0%
!!! ATCAAAATGGGAAAATATTT+TGG - Chr3:75809770-75809789 None:intergenic 20.0%
!!! ATTTTATCTTTTTGAGTGAA+AGG + Chr3:75808913-75808932 MsG0380015844.01.T01:intron 20.0%
!!! CCAAAATTATCATATTTTGA+AGG - Chr3:75809736-75809755 None:intergenic 20.0%
!!! CCTTCAAAATATGATAATTT+TGG + Chr3:75809733-75809752 MsG0380015844.01.T01:intron 20.0%
!!! GAGAAACATAACTAATTTTT+TGG + Chr3:75807641-75807660 MsG0380015844.01.T01:intron 20.0%
!!! GTATTTGGAATAAAATCTTT+AGG + Chr3:75806860-75806879 MsG0380015844.01.T01:intron 20.0%
!!! TAAAAAGTATATGTTCATTC+AGG - Chr3:75809435-75809454 None:intergenic 20.0%
!!! TCATCTAAATTTTGAAAAAC+AGG - Chr3:75806402-75806421 None:intergenic 20.0%
!!! TGAAATGCATAAAACATTTT+TGG + Chr3:75809123-75809142 MsG0380015844.01.T01:intron 20.0%
!!! TTTTTTTGGTACAAAAAAGA+GGG - Chr3:75810286-75810305 None:intergenic 20.0%
!!! TTTTTTTTGGTACAAAAAAG+AGG - Chr3:75810287-75810306 None:intergenic 20.0%
! AAAATAAGTGTATGCATACA+TGG - Chr3:75806592-75806611 None:intergenic 25.0%
! AAAATGATGAAGAAAATGGT+TGG - Chr3:75807874-75807893 MsG0380015845.01.T01:CDS 25.0%
! AACTTAGAAATGATTCATAG+AGG + Chr3:75807058-75807077 MsG0380015844.01.T01:intron 25.0%
! ACAATTGAGCAAGAAAATAT+GGG - Chr3:75805498-75805517 None:intergenic 25.0%
! AGCACAAAGAAAGAAAAAAA+GGG + Chr3:75807667-75807686 MsG0380015844.01.T01:intron 25.0%
! AGTAAAATTTCAGAAAGTTC+TGG - Chr3:75806425-75806444 None:intergenic 25.0%
! ATGGTATATTAGATACTTGA+AGG + Chr3:75805315-75805334 MsG0380015844.01.T01:intron 25.0%
! ATTCTTAGTTAATATACACG+AGG - Chr3:75806277-75806296 None:intergenic 25.0%
! CAAAATAAACCATTTAAGCA+TGG + Chr3:75806719-75806738 MsG0380015844.01.T01:intron 25.0%
! CTCTTGAAAAGTAAACTTAA+CGG + Chr3:75810194-75810213 MsG0380015844.01.T01:intron 25.0%
! GCAAATAAATTGCGAATAAA+AGG - Chr3:75809890-75809909 None:intergenic 25.0%
! GTCCAAATCAAAAATACATT+TGG + Chr3:75807731-75807750 MsG0380015844.01.T01:intron 25.0%
! TAATGCTATATGTCTTATAG+TGG - Chr3:75809472-75809491 None:intergenic 25.0%
! TAGCACAAAGAAAGAAAAAA+AGG + Chr3:75807666-75807685 MsG0380015844.01.T01:intron 25.0%
! TATTGAAAAACTCAAGTAAC+AGG - Chr3:75809312-75809331 None:intergenic 25.0%
! TCAAATAAGTCAATTCATTC+AGG - Chr3:75804802-75804821 None:intergenic 25.0%
! TTAGGAATGTTGAATGATAA+TGG - Chr3:75804518-75804537 None:intergenic 25.0%
! TTCCTTAATAGTGCTTATAT+GGG - Chr3:75806966-75806985 None:intergenic 25.0%
!! ATATGTTGTTTATCCAAACT+TGG + Chr3:75805234-75805253 MsG0380015844.01.T01:intron 25.0%
!! GAAAACAAGGATAGTTTTTA+TGG + Chr3:75808213-75808232 MsG0380015844.01.T01:intron 25.0%
!! TAATTTGTGCTGGATATATA+AGG + Chr3:75806228-75806247 MsG0380015844.01.T01:intron 25.0%
!! TTTTTATGAACGCTATAGTA+GGG - Chr3:75809827-75809846 None:intergenic 25.0%
!!! ATACTTTTTAGAGTAGAACT+TGG + Chr3:75809445-75809464 MsG0380015844.01.T01:intron 25.0%
!!! CACTGATCTTATTTTCTTAT+TGG - Chr3:75806786-75806805 None:intergenic 25.0%
!!! CATTTAGGTTTTCTTTTTCT+TGG - Chr3:75808940-75808959 None:intergenic 25.0%
!!! GGCTTTTAACTAATCATTTT+GGG - Chr3:75806765-75806784 None:intergenic 25.0%
!!! TGAACAATATACACGTTTTT+TGG - Chr3:75810603-75810622 None:intergenic 25.0%
!!! TGGCTTTTAACTAATCATTT+TGG - Chr3:75806766-75806785 None:intergenic 25.0%
!!! TTGTTTTATAGTAGGGTATT+GGG - Chr3:75807763-75807782 None:intergenic 25.0%
!!! TTTGTTTTATAGTAGGGTAT+TGG - Chr3:75807764-75807783 None:intergenic 25.0%
!!! TTTTTTATGAACGCTATAGT+AGG - Chr3:75809828-75809847 None:intergenic 25.0%
AAAGGATCACAAAAATTGGA+TGG - Chr3:75805812-75805831 None:intergenic 30.0%
AACCCATATAAGCACTATTA+AGG + Chr3:75806961-75806980 MsG0380015844.01.T01:intron 30.0%
AACTTTACTGTTATCATCTG+CGG + Chr3:75809677-75809696 MsG0380015844.01.T01:intron 30.0%
AAGACATATAGCATTATGCA+TGG + Chr3:75809476-75809495 MsG0380015844.01.T01:intron 30.0%
AAGACTCAATGGTTGTTAAA+TGG + Chr3:75807700-75807719 MsG0380015844.01.T01:intron 30.0%
AATACGATAATCACACATGA+AGG - Chr3:75808430-75808449 None:intergenic 30.0%
AATGTTACTAGTTGTACTTC+AGG + Chr3:75808734-75808753 MsG0380015844.01.T01:intron 30.0%
ACACAAGAACAGATAGTATT+TGG + Chr3:75806845-75806864 MsG0380015844.01.T01:intron 30.0%
ACATAAGCGTTTATCATGAT+TGG + Chr3:75804986-75805005 MsG0380015844.01.T01:intron 30.0%
ACTATTAAGGAAGGATAGAA+TGG + Chr3:75806974-75806993 MsG0380015844.01.T01:intron 30.0%
AGAATAGAAAGAGAGAACTA+GGG - Chr3:75807795-75807814 None:intergenic 30.0%
AGACTCAATGGTTGTTAAAT+GGG + Chr3:75807701-75807720 MsG0380015844.01.T01:intron 30.0%
AGATAAATCCGAGCTAAATT+AGG - Chr3:75804691-75804710 None:intergenic 30.0%
AGGTCGAAATGAAAAAAGAA+TGG - Chr3:75807910-75807929 MsG0380015845.01.T01:CDS 30.0%
ATAAACATCACCAATGATGT+AGG - Chr3:75808561-75808580 None:intergenic 30.0%
ATAAGTTCTATGAGACTGTT+TGG + Chr3:75805079-75805098 MsG0380015844.01.T01:intron 30.0%
ATGATTCATAGAGGACATTA+TGG + Chr3:75807067-75807086 MsG0380015844.01.T01:intron 30.0%
ATTAAGAAAGCCTACATCAT+TGG + Chr3:75808548-75808567 MsG0380015844.01.T01:CDS 30.0%
ATTCTTATATTTAAGGACGG+AGG - Chr3:75810029-75810048 None:intergenic 30.0%
ATTTAAACTCCCTGTTAAGT+TGG + Chr3:75805019-75805038 MsG0380015844.01.T01:intron 30.0%
CACAAACATACAAAAGTTTC+AGG - Chr3:75805932-75805951 None:intergenic 30.0%
CACAAAGAAAGAAAAAAAGG+GGG + Chr3:75807669-75807688 MsG0380015844.01.T01:intron 30.0%
CACAATTGAGCAAGAAAATA+TGG - Chr3:75805499-75805518 None:intergenic 30.0%
CAGAATGTCCATAAAATGTT+CGG + Chr3:75808466-75808485 MsG0380015844.01.T01:intron 30.0%
CATAACATGTCAAGACATTT+AGG - Chr3:75808955-75808974 None:intergenic 30.0%
CATAGTGAACAAGATAAATG+AGG - Chr3:75805298-75805317 None:intergenic 30.0%
CATATAAGCACTATTAAGGA+AGG + Chr3:75806965-75806984 MsG0380015844.01.T01:intron 30.0%
CGAGTTTATATATTTAGAGG+CGG + Chr3:75810329-75810348 MsG0380015844.01.T01:intron 30.0%
CTCATTTATCTTGTTCACTA+TGG + Chr3:75805296-75805315 MsG0380015844.01.T01:intron 30.0%
CTTCCTTAATAGTGCTTATA+TGG - Chr3:75806967-75806986 None:intergenic 30.0%
GAAAAAAATTAGGCCAAGTT+TGG - Chr3:75805250-75805269 None:intergenic 30.0%
GAGAAAAGGATCACAAAAAT+TGG - Chr3:75805816-75805835 None:intergenic 30.0%
GAGTTTCAGAAATTACAATG+AGG - Chr3:75804389-75804408 None:intergenic 30.0%
GATTATACATACGCGTTTAT+TGG + Chr3:75805190-75805209 MsG0380015844.01.T01:intron 30.0%
GCACAAAGAAAGAAAAAAAG+GGG + Chr3:75807668-75807687 MsG0380015844.01.T01:intron 30.0%
GGTCGAAATGAAAAAAGAAT+GGG - Chr3:75807909-75807928 MsG0380015845.01.T01:CDS 30.0%
GTACAAAATCCATGCTTAAA+TGG - Chr3:75806731-75806750 None:intergenic 30.0%
GTATATTAGATACTTGAAGG+AGG + Chr3:75805318-75805337 MsG0380015844.01.T01:intron 30.0%
GTTCATGTTGTCAAATTGTT+TGG + Chr3:75810618-75810637 MsG0380015844.01.T01:three_prime_UTR 30.0%
TAAATTGTTCCACTAGCTAA+AGG + Chr3:75809272-75809291 MsG0380015844.01.T01:intron 30.0%
TAACTTCAAAGATGTCATCA+TGG + Chr3:75805372-75805391 MsG0380015844.01.T01:CDS 30.0%
TAAGTTCTATGAGACTGTTT+GGG + Chr3:75805080-75805099 MsG0380015844.01.T01:intron 30.0%
TAATCATCAAAATGCCACAA+TGG - Chr3:75805789-75805808 None:intergenic 30.0%
TACTAGTACTAGTATGTTGA+TGG + Chr3:75805447-75805466 MsG0380015844.01.T01:intron 30.0%
TAGAATAGAAAGAGAGAACT+AGG - Chr3:75807796-75807815 None:intergenic 30.0%
TATAAGGAACTGTAGATAAC+TGG + Chr3:75806244-75806263 MsG0380015844.01.T01:intron 30.0%
TATACACACCACAGTTTATA+AGG - Chr3:75806066-75806085 None:intergenic 30.0%
TATGTAATTGGAAAAGACTC+TGG + Chr3:75807128-75807147 MsG0380015844.01.T01:intron 30.0%
TGAATATTAACCTTTGCAGA+CGG - Chr3:75808608-75808627 None:intergenic 30.0%
TTAAAATTTCCAAACTTGCC+TGG - Chr3:75809244-75809263 None:intergenic 30.0%
TTTAACTCTCGTGATTTAGA+GGG + Chr3:75810255-75810274 MsG0380015844.01.T01:intron 30.0%
TTTATATATTTAGAGGCGGA+GGG + Chr3:75810333-75810352 MsG0380015844.01.T01:intron 30.0%
! ATGGAAATGAGGTATCAAAA+TGG - Chr3:75809783-75809802 None:intergenic 30.0%
! ATGTTCAATCTAATTTGTGC+TGG + Chr3:75806218-75806237 MsG0380015844.01.T01:intron 30.0%
! CAACTTGACTTTTGTTAATG+TGG + Chr3:75808975-75808994 MsG0380015844.01.T01:intron 30.0%
! GGAGTTCTTCATATTTTGTA+TGG + Chr3:75805468-75805487 MsG0380015844.01.T01:intron 30.0%
! TGCTGTTTGATCTATGTAAT+TGG + Chr3:75807116-75807135 MsG0380015844.01.T01:intron 30.0%
! TGGAAATGAGGTATCAAAAT+GGG - Chr3:75809782-75809801 None:intergenic 30.0%
!! GAATGTTGAATGATAATGGA+CGG - Chr3:75804514-75804533 None:intergenic 30.0%
!! GCCCAAATGTATTTTTGATT+TGG - Chr3:75807736-75807755 None:intergenic 30.0%
!! TCACTTAAAACCACTTTTCA+GGG - Chr3:75807993-75808012 MsG0380015845.01.T01:CDS 30.0%
!! TTCACTTAAAACCACTTTTC+AGG - Chr3:75807994-75808013 MsG0380015845.01.T01:CDS 30.0%
!! TTTTAACTCTCGTGATTTAG+AGG + Chr3:75810254-75810273 MsG0380015844.01.T01:intron 30.0%
!!! AAGTGGTTTTAAGTGAAAAG+CGG + Chr3:75807997-75808016 MsG0380015844.01.T01:intron 30.0%
AAACGCAAACTTCGTATTTC+TGG - Chr3:75806168-75806187 None:intergenic 35.0%
AAACTCAACATGCCTCAAAT+AGG + Chr3:75809557-75809576 MsG0380015844.01.T01:intron 35.0%
AAATAAAAAGCCAAGAGCAG+AGG - Chr3:75810541-75810560 None:intergenic 35.0%
AAATAGGATTACCTTACCTC+CGG + Chr3:75809573-75809592 MsG0380015844.01.T01:intron 35.0%
AACCTATTAGCAAATGGAGA+TGG + Chr3:75808524-75808543 MsG0380015844.01.T01:CDS 35.0%
AAGAAATTACCCAGCATTTG+TGG - Chr3:75805545-75805564 None:intergenic 35.0%
ACAGATGCTCACAAAAAACA+TGG + Chr3:75805708-75805727 MsG0380015844.01.T01:intron 35.0%
ACCTTCAAAAAGAGGAGAAA+AGG - Chr3:75805830-75805849 None:intergenic 35.0%
AGATATCTTTACTGCCATTG+AGG + Chr3:75806096-75806115 MsG0380015844.01.T01:CDS 35.0%
AGATGATGAGAATGCTATGA+TGG + Chr3:75806812-75806831 MsG0380015844.01.T01:intron 35.0%
AGATTACAACGCAAAGTTTG+GGG + Chr3:75809940-75809959 MsG0380015844.01.T01:intron 35.0%
AGGCAAGTCTACACATTAAT+TGG + Chr3:75809097-75809116 MsG0380015844.01.T01:intron 35.0%
AGGTAAGGTAATCCTATTTG+AGG - Chr3:75809572-75809591 None:intergenic 35.0%
ATATCTGCAAATGCTCGTAT+AGG + Chr3:75809024-75809043 MsG0380015844.01.T01:CDS 35.0%
ATTCAGAAGAGTTCTTCTGT+AGG + Chr3:75808250-75808269 MsG0380015844.01.T01:intron 35.0%
CACTATACAGTGTGAAAACA+AGG + Chr3:75808200-75808219 MsG0380015844.01.T01:intron 35.0%
CATATCCTTCATCTTCATTG+CGG + Chr3:75804408-75804427 MsG0380015844.01.T01:five_prime_UTR 35.0%
CATTTCCATAGCAATGTTGA+GGG + Chr3:75809794-75809813 MsG0380015844.01.T01:intron 35.0%
CCTTGATTTCAACATCATCA+AGG - Chr3:75809080-75809099 None:intergenic 35.0%
CTCAGATTCCTAATTTAGCT+CGG + Chr3:75804680-75804699 MsG0380015844.01.T01:intron 35.0%
GAACAAGATAAATGAGGAAG+AGG - Chr3:75805292-75805311 None:intergenic 35.0%
GAATACTGTTATTATGGGGA+AGG + Chr3:75810355-75810374 MsG0380015844.01.T01:intron 35.0%
GAGATTACAACGCAAAGTTT+GGG + Chr3:75809939-75809958 MsG0380015844.01.T01:intron 35.0%
GAGGGAATACTGTTATTATG+GGG + Chr3:75810351-75810370 MsG0380015844.01.T01:intron 35.0%
GATAATATTCAAGCTTACCC+AGG - Chr3:75808387-75808406 None:intergenic 35.0%
GATAGAATCTTGCCTTAAGT+TGG + Chr3:75806918-75806937 MsG0380015844.01.T01:intron 35.0%
GATATCTTTACTGCCATTGA+GGG + Chr3:75806097-75806116 MsG0380015844.01.T01:CDS 35.0%
GCGAAATTGTGAAAGATACA+AGG - Chr3:75808492-75808511 None:intergenic 35.0%
GGAGGGAATACTGTTATTAT+GGG + Chr3:75810350-75810369 MsG0380015844.01.T01:intron 35.0%
GGATAGAATGGTAGATAGAA+TGG + Chr3:75806986-75807005 MsG0380015844.01.T01:intron 35.0%
GGGTAAAGAAAAAGACTCAA+TGG + Chr3:75807689-75807708 MsG0380015844.01.T01:intron 35.0%
GGTTGTCAAGGTTAGAAATT+GGG + Chr3:75805749-75805768 MsG0380015844.01.T01:intron 35.0%
GTTAATGTGGTTGAACAGAT+TGG + Chr3:75808988-75809007 MsG0380015844.01.T01:intron 35.0%
GTTAGTGACCTTATAAACTG+TGG + Chr3:75806055-75806074 MsG0380015844.01.T01:CDS 35.0%
GTTGTTCTTCATGCAATTGT+TGG + Chr3:75809185-75809204 MsG0380015844.01.T01:CDS 35.0%
GTTTATATATTTAGAGGCGG+AGG + Chr3:75810332-75810351 MsG0380015844.01.T01:intron 35.0%
TATAAACTAATTCAGGGTCG+TGG + Chr3:75809917-75809936 MsG0380015844.01.T01:intron 35.0%
TCAAATACGTTGATCCAAAC+TGG - Chr3:75805053-75805072 None:intergenic 35.0%
TCAACATTGCTATGGAAATG+AGG - Chr3:75809794-75809813 None:intergenic 35.0%
TCAATGGCAGTAAAGATATC+TGG - Chr3:75806097-75806116 None:intergenic 35.0%
TCAGATGTACTACCAACTTA+AGG - Chr3:75806933-75806952 None:intergenic 35.0%
TCATTTCCATAGCAATGTTG+AGG + Chr3:75809793-75809812 MsG0380015844.01.T01:intron 35.0%
TGATCGAGATCTGATTAAGA+AGG - Chr3:75806546-75806565 None:intergenic 35.0%
TGGAAGATAATACATCAGTG+AGG + Chr3:75807006-75807025 MsG0380015844.01.T01:intron 35.0%
TGGTTGTCAAGGTTAGAAAT+TGG + Chr3:75805748-75805767 MsG0380015844.01.T01:intron 35.0%
TTAGCTCGGATTTATCTCAT+TGG + Chr3:75804694-75804713 MsG0380015844.01.T01:CDS 35.0%
TTATATTCACCCATCAGCAA+AGG + Chr3:75808577-75808596 MsG0380015844.01.T01:CDS 35.0%
TTATATTTAAGGACGGAGGT+AGG - Chr3:75810025-75810044 None:intergenic 35.0%
TTCTCATAACACAGATCAAG+TGG - Chr3:75808820-75808839 None:intergenic 35.0%
TTCTTCATGCAATTGTTGGA+TGG + Chr3:75809189-75809208 MsG0380015844.01.T01:CDS 35.0%
! ATACAAGGCCGAACATTTTA+TGG - Chr3:75808477-75808496 None:intergenic 35.0%
! CTCCATTTGCTAATAGGTTA+GGG - Chr3:75808523-75808542 None:intergenic 35.0%
! TACCATCTCCATTTGCTAAT+AGG - Chr3:75808529-75808548 None:intergenic 35.0%
! TCCATTTGCTAATAGGTTAG+GGG - Chr3:75808522-75808541 None:intergenic 35.0%
! TCCTTTTCTCCTCTTTTTGA+AGG + Chr3:75805826-75805845 MsG0380015844.01.T01:intron 35.0%
! TCTCCATTTGCTAATAGGTT+AGG - Chr3:75808524-75808543 None:intergenic 35.0%
!! ATTTGAGGCATGTTGAGTTT+TGG - Chr3:75809557-75809576 None:intergenic 35.0%
!! CACACATTGTTTTTCCATTG+TGG + Chr3:75805772-75805791 MsG0380015844.01.T01:intron 35.0%
!! CCTTGATGATGTTGAAATCA+AGG + Chr3:75809077-75809096 MsG0380015844.01.T01:intron 35.0%
!! TTAAGTTGGTAGTACATCTG+AGG + Chr3:75806932-75806951 MsG0380015844.01.T01:intron 35.0%
AAACCACTCTTTCCATTAGC+TGG + Chr3:75804536-75804555 MsG0380015844.01.T01:CDS 40.0%
AAGATAAAATAGGTCCTCGC+AGG - Chr3:75808903-75808922 None:intergenic 40.0%
AAGATGATCGTGAAAGCCTT+GGG - Chr3:75808661-75808680 None:intergenic 40.0%
AATTGCAGAAGAGAGAGTTG+TGG + Chr3:75804448-75804467 MsG0380015844.01.T01:CDS 40.0%
AGAGATTGGATGATGAACCA+TGG - Chr3:75804567-75804586 None:intergenic 40.0%
ATAAGACGGTAAACAGCAGT+AGG - Chr3:75806012-75806031 None:intergenic 40.0%
ATCTTGAACGCCGACATTTA+AGG - Chr3:75810496-75810515 None:intergenic 40.0%
ATTGCGGATCTCGAATAAGA+TGG + Chr3:75804424-75804443 MsG0380015844.01.T01:exon 40.0%
CAAAACAAGCCTTTAGCTAG+TGG - Chr3:75809284-75809303 None:intergenic 40.0%
CAATGTCCTGCTAAGAAACA+AGG - Chr3:75807093-75807112 None:intergenic 40.0%
CACAAAAAACATGGTGGCAT+GGG + Chr3:75805717-75805736 MsG0380015844.01.T01:intron 40.0%
CCACACAAGACCTTAAATGT+CGG + Chr3:75810483-75810502 MsG0380015844.01.T01:CDS 40.0%
CGGAGGGAATACTGTTATTA+TGG + Chr3:75810349-75810368 MsG0380015844.01.T01:intron 40.0%
CTTCAAAGATGTCATCATGG+AGG + Chr3:75805375-75805394 MsG0380015844.01.T01:CDS 40.0%
GAGATTGGATGATGAACCAT+GGG - Chr3:75804566-75804585 None:intergenic 40.0%
GATGCTCACAAAAAACATGG+TGG + Chr3:75805711-75805730 MsG0380015844.01.T01:intron 40.0%
GCATGAAATCCAACCTAACA+GGG - Chr3:75804780-75804799 None:intergenic 40.0%
GCCACTAATCCAACTTAACA+GGG - Chr3:75805031-75805050 None:intergenic 40.0%
GCTAATGGAAAGAGTGGTTT+AGG - Chr3:75804536-75804555 None:intergenic 40.0%
GCTTCTCATACAGGAGAAAT+GGG - Chr3:75809395-75809414 None:intergenic 40.0%
GGAGATTACAACGCAAAGTT+TGG + Chr3:75809938-75809957 MsG0380015844.01.T01:intron 40.0%
GGGAACAAATCAAAACTCCT+GGG + Chr3:75808367-75808386 MsG0380015844.01.T01:CDS 40.0%
GTAATTGGAAAAGACTCTGG+TGG + Chr3:75807131-75807150 MsG0380015844.01.T01:intron 40.0%
TAAGACGGTAAACAGCAGTA+GGG - Chr3:75806011-75806030 None:intergenic 40.0%
TAAGATGATCGTGAAAGCCT+TGG - Chr3:75808662-75808681 None:intergenic 40.0%
TACCAATTCGCCAAATTCAC+TGG - Chr3:75805867-75805886 None:intergenic 40.0%
TCACAAAAAACATGGTGGCA+TGG + Chr3:75805716-75805735 MsG0380015844.01.T01:intron 40.0%
TCCAATCTGACATAATTCGC+CGG - Chr3:75808282-75808301 None:intergenic 40.0%
TCCCCTAACCTATTAGCAAA+TGG + Chr3:75808518-75808537 MsG0380015844.01.T01:CDS 40.0%
TGCTTCTCATACAGGAGAAA+TGG - Chr3:75809396-75809415 None:intergenic 40.0%
TGGGAACAAATCAAAACTCC+TGG + Chr3:75808366-75808385 MsG0380015844.01.T01:CDS 40.0%
TGGTTGCATAGTTGTCAAAG+CGG + Chr3:75807151-75807170 MsG0380015844.01.T01:intron 40.0%
TGTGTAATGCAGGAGTTCAT+TGG - Chr3:75805903-75805922 None:intergenic 40.0%
TTGCGGATCTCGAATAAGAT+GGG + Chr3:75804425-75804444 MsG0380015844.01.T01:exon 40.0%
TTTGTTCTAGTCTAGCCTCT+AGG - Chr3:75809503-75809522 None:intergenic 40.0%
! AAGTTTGGGGTCACTATACT+TGG + Chr3:75809953-75809972 MsG0380015844.01.T01:intron 40.0%
! ACTTTTCGACAAGCAGAGAT+TGG - Chr3:75804581-75804600 None:intergenic 40.0%
! CATTTAAGGTCTTGTGTGGA+AGG - Chr3:75810482-75810501 None:intergenic 40.0%
!! TCCCTGTTAAGTTGGATTAG+TGG + Chr3:75805027-75805046 MsG0380015844.01.T01:intron 40.0%
!! TTATAGTAGGGTATTGGGCT+AGG - Chr3:75807758-75807777 None:intergenic 40.0%
!! TTATGGCCTTGTTTCTTAGC+AGG + Chr3:75807084-75807103 MsG0380015844.01.T01:intron 40.0%
AAAATAGGTCCTCGCAGGTA+TGG - Chr3:75808898-75808917 None:intergenic 45.0%
AAATAGGTCCTCGCAGGTAT+GGG - Chr3:75808897-75808916 None:intergenic 45.0%
AACCACTACCTCATCCTCAA+CGG - Chr3:75810445-75810464 None:intergenic 45.0%
AAGGTCACTAACCTGCAATC+AGG - Chr3:75806047-75806066 None:intergenic 45.0%
ACCGGCGAATTATGTCAGAT+TGG + Chr3:75808278-75808297 MsG0380015844.01.T01:CDS 45.0%
ACGACCTTAAACTCCCTGTT+AGG + Chr3:75804764-75804783 MsG0380015844.01.T01:CDS 45.0%
AGATGATCGTGAAAGCCTTG+GGG - Chr3:75808660-75808679 None:intergenic 45.0%
AGCATTATGCATGGTCCTAG+AGG + Chr3:75809485-75809504 MsG0380015844.01.T01:intron 45.0%
ATACATCAGTGAGGCGTAGA+AGG + Chr3:75807015-75807034 MsG0380015844.01.T01:intron 45.0%
ATATCCTCTCACCTCTTGCA+GGG + Chr3:75808307-75808326 MsG0380015844.01.T01:CDS 45.0%
CAAAGATGTCATCATGGAGG+AGG + Chr3:75805378-75805397 MsG0380015844.01.T01:CDS 45.0%
CAGGTTTCTCTGTGTAATGC+AGG - Chr3:75805913-75805932 None:intergenic 45.0%
CATTCAGGCTCAAGATGAGT+GGG - Chr3:75809420-75809439 None:intergenic 45.0%
CCAACCTAACAGGGAGTTTA+AGG - Chr3:75804771-75804790 None:intergenic 45.0%
CCTTAAACTCCCTGTTAGGT+TGG + Chr3:75804768-75804787 MsG0380015844.01.T01:intron 45.0%
CTAATAGGTTAGGGGATGTG+TGG - Chr3:75808514-75808533 None:intergenic 45.0%
CTGAGAAGAAACACCCTCAA+TGG - Chr3:75806113-75806132 None:intergenic 45.0%
CTGGAGAGACCTTCAAAAAG+AGG - Chr3:75805838-75805857 None:intergenic 45.0%
CTTGTTCTCATGTTGTGACC+AGG + Chr3:75810408-75810427 MsG0380015844.01.T01:intron 45.0%
GAAATCCTCCATTGGACGAT+GGG + Chr3:75809211-75809230 MsG0380015844.01.T01:CDS 45.0%
GAGATCCGCAATGAAGATGA+AGG - Chr3:75804416-75804435 None:intergenic 45.0%
GGCATGAAATCCAACCTAAC+AGG - Chr3:75804781-75804800 None:intergenic 45.0%
GGCCACTAATCCAACTTAAC+AGG - Chr3:75805032-75805051 None:intergenic 45.0%
GGTAAGCTTGCAGCATAAGA+CGG - Chr3:75806026-75806045 None:intergenic 45.0%
GGTTGGAGAAGAAAGACTAC+TGG - Chr3:75807857-75807876 MsG0380015845.01.T01:CDS 45.0%
GTTCTTCTGTAGGAGTCTAC+CGG + Chr3:75808260-75808279 MsG0380015844.01.T01:CDS 45.0%
GTTGGATGGAAATCCTCCAT+TGG + Chr3:75809203-75809222 MsG0380015844.01.T01:CDS 45.0%
TAGTTGTCAAAGCGGAAACG+CGG + Chr3:75807159-75807178 MsG0380015844.01.T01:intron 45.0%
TCATTCAGGCTCAAGATGAG+TGG - Chr3:75809421-75809440 None:intergenic 45.0%
TGGAGAAGAAAGACTACTGG+CGG - Chr3:75807854-75807873 MsG0380015845.01.T01:CDS 45.0%
TGTCCAGCTAATGGAAAGAG+TGG - Chr3:75804542-75804561 None:intergenic 45.0%
TTACTGTTATCATCTGCGGC+AGG + Chr3:75809681-75809700 MsG0380015844.01.T01:intron 45.0%
TTTCAATAGGTTCCCTCCAC+CGG - Chr3:75809595-75809614 None:intergenic 45.0%
TTTCCTCTGCCACAAATGCT+GGG + Chr3:75805533-75805552 MsG0380015844.01.T01:intron 45.0%
TTTGAAGGTCTCTCCAGAGT+CGG + Chr3:75805841-75805860 MsG0380015844.01.T01:intron 45.0%
TTTGCAGATATTGACACGCC+AGG - Chr3:75809015-75809034 None:intergenic 45.0%
! AACAGGGAGTTTAAGGTCGT+TGG - Chr3:75804764-75804783 None:intergenic 45.0%
! AACTGTTTCTTCCCTGCAAG+AGG - Chr3:75808321-75808340 None:intergenic 45.0%
! CCGACATTTAAGGTCTTGTG+TGG - Chr3:75810486-75810505 None:intergenic 45.0%
! GAAACAGCTGGATCTGAGAT+CGG - Chr3:75807968-75807987 MsG0380015845.01.T01:CDS 45.0%
! GAGTTTAAGGTCGTTGGAGA+TGG - Chr3:75804758-75804777 None:intergenic 45.0%
! GGGAACAATACTGGTTGTCA+AGG + Chr3:75805737-75805756 MsG0380015844.01.T01:intron 45.0%
! TTTTCCTCTGCCACAAATGC+TGG + Chr3:75805532-75805551 MsG0380015844.01.T01:intron 45.0%
!! ACATCTAGTTCTCTACCCCA+AGG + Chr3:75808642-75808661 MsG0380015844.01.T01:intron 45.0%
!! AGTTGGATTAGTGGCCAGTT+TGG + Chr3:75805036-75805055 MsG0380015844.01.T01:intron 45.0%
!! AGTTGGTAGTACATCTGAGG+AGG + Chr3:75806935-75806954 MsG0380015844.01.T01:intron 45.0%
!! CAGCTTTTGGTTGGAGAAGA+AGG - Chr3:75807831-75807850 MsG0380015845.01.T01:CDS 45.0%
!! TTGAGGGTGTTTCTTCTCAG+CGG + Chr3:75806113-75806132 MsG0380015844.01.T01:CDS 45.0%
AAGCAATGCAGCAGGACACA+AGG + Chr3:75806350-75806369 MsG0380015844.01.T01:intron 50.0%
ACGGATGCACCTTTGCTGAT+GGG - Chr3:75808589-75808608 None:intergenic 50.0%
AGGTGAATCTGTTGCCGTTG+AGG + Chr3:75810428-75810447 MsG0380015844.01.T01:intron 50.0%
ATCTGTTGCCGTTGAGGATG+AGG + Chr3:75810434-75810453 MsG0380015844.01.T01:CDS 50.0%
ATTACCTTACCTCCGGTGGA+GGG + Chr3:75809580-75809599 MsG0380015844.01.T01:intron 50.0%
CAGCAGTAGGGAAGAGAGAA+AGG - Chr3:75805999-75806018 None:intergenic 50.0%
CGTCACCCTCAACATTGCTA+TGG - Chr3:75809802-75809821 None:intergenic 50.0%
CTGCAAGCTTACCTGATTGC+AGG + Chr3:75806033-75806052 MsG0380015844.01.T01:intron 50.0%
CTGCTGCATTGCTTCAAAGC+TGG - Chr3:75806344-75806363 None:intergenic 50.0%
GAGAGTTGTGGCGGTTATCA+TGG + Chr3:75804460-75804479 MsG0380015844.01.T01:CDS 50.0%
GAGTGGGATGCTTCTCATAC+AGG - Chr3:75809404-75809423 None:intergenic 50.0%
GATATCCTCTCACCTCTTGC+AGG + Chr3:75808306-75808325 MsG0380015844.01.T01:CDS 50.0%
GATCGGAACAACTGGATCTG+AGG - Chr3:75807930-75807949 MsG0380015845.01.T01:CDS 50.0%
GCAAATGCTCGTATAGGAGC+TGG + Chr3:75809030-75809049 MsG0380015844.01.T01:CDS 50.0%
GGAAATCCTCCATTGGACGA+TGG + Chr3:75809210-75809229 MsG0380015844.01.T01:CDS 50.0%
GGCCAGTGAATTTGGCGAAT+TGG + Chr3:75805862-75805881 MsG0380015844.01.T01:intron 50.0%
GTTGTGGCGGTTATCATGGT+TGG + Chr3:75804464-75804483 MsG0380015844.01.T01:CDS 50.0%
TAGAACACGTCCTCTGCTCT+TGG + Chr3:75810528-75810547 MsG0380015844.01.T01:exon 50.0%
TAGGATTACCTTACCTCCGG+TGG + Chr3:75809576-75809595 MsG0380015844.01.T01:intron 50.0%
TCAACGGCAACAGATTCACC+TGG - Chr3:75810429-75810448 None:intergenic 50.0%
TCCATTAGCTGGACAACCCA+TGG + Chr3:75804547-75804566 MsG0380015844.01.T01:CDS 50.0%
TCTTCTCAGCGGAAAGACAG+AGG + Chr3:75806124-75806143 MsG0380015844.01.T01:CDS 50.0%
TGCAGAAGAGAGAGTTGTGG+CGG + Chr3:75804451-75804470 MsG0380015844.01.T01:CDS 50.0%
TGGTGGCATGGGAACAATAC+TGG + Chr3:75805728-75805747 MsG0380015844.01.T01:intron 50.0%
TGTCATCATGGAGGAGGATC+CGG + Chr3:75805384-75805403 MsG0380015844.01.T01:CDS 50.0%
TTACCCAGCATTTGTGGCAG+AGG - Chr3:75805539-75805558 None:intergenic 50.0%
TTGAAGGAGGACAAGCCTCA+TGG + Chr3:75805331-75805350 MsG0380015844.01.T01:CDS 50.0%
! AAAGGTGCATCCGTCTGCAA+AGG + Chr3:75808595-75808614 MsG0380015844.01.T01:CDS 50.0%
! ACCATGGGTTGTCCAGCTAA+TGG - Chr3:75804551-75804570 None:intergenic 50.0%
! GCTGTTTCGACCCTGAAAAG+TGG + Chr3:75807980-75807999 MsG0380015844.01.T01:intron 50.0%
! GGAACAGCTGGATCTGAGAT+CGG - Chr3:75807947-75807966 MsG0380015845.01.T01:CDS 50.0%
! GGATCTGAGATCGGAACAAC+TGG - Chr3:75807938-75807957 MsG0380015845.01.T01:CDS 50.0%
! GTGGTTGAACAGATTGGTCC+TGG + Chr3:75808994-75809013 MsG0380015844.01.T01:intron 50.0%
! TGCAGGAGTTCATTGGTGAC+TGG - Chr3:75805896-75805915 None:intergenic 50.0%
! TTTGGAGAAAGCGGGTTTCG+CGG - Chr3:75808068-75808087 None:intergenic 50.0%
!! CAGCTTTGAAGCAATGCAGC+AGG + Chr3:75806342-75806361 MsG0380015844.01.T01:intron 50.0%
!! CTTTTCAGGGTCGAAACAGC+TGG - Chr3:75807980-75807999 MsG0380015845.01.T01:CDS 50.0%
ACGGAATCGAGTGCCTTTGG+TGG - Chr3:75804495-75804514 None:intergenic 55.0%
AGACCACCAGCAGAACCATG+AGG - Chr3:75805349-75805368 None:intergenic 55.0%
ATGGTTGGAGGACCCACCAA+AGG + Chr3:75804479-75804498 MsG0380015844.01.T01:CDS 55.0%
CCACCCTCTGTTGTCAAACG+CGG - Chr3:75808164-75808183 None:intergenic 55.0%
CCAGAGTCGGCCAGTGAATT+TGG + Chr3:75805854-75805873 MsG0380015844.01.T01:intron 55.0%
CGGAATCGAGTGCCTTTGGT+GGG - Chr3:75804494-75804513 None:intergenic 55.0%
GACGGATGCACCTTTGCTGA+TGG - Chr3:75808590-75808609 None:intergenic 55.0%
GATTACCTTACCTCCGGTGG+AGG + Chr3:75809579-75809598 MsG0380015844.01.T01:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG + Chr3:75807190-75807209 MsG0380015844.01.T01:intron 55.0%
GTGGCGGTTATCATGGTTGG+AGG + Chr3:75804467-75804486 MsG0380015844.01.T01:CDS 55.0%
TCTTCCCTGCAAGAGGTGAG+AGG - Chr3:75808314-75808333 None:intergenic 55.0%
TGCCGTTGAGGATGAGGTAG+TGG + Chr3:75810440-75810459 MsG0380015844.01.T01:CDS 55.0%
TGGACGGAATCGAGTGCCTT+TGG - Chr3:75804498-75804517 None:intergenic 55.0%
! AAGCCTCATGGTTCTGCTGG+TGG + Chr3:75805343-75805362 MsG0380015844.01.T01:CDS 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG - Chr3:75807199-75807218 None:intergenic 55.0%
! AGACTACTGGCGGCAGCTTT+TGG - Chr3:75807844-75807863 MsG0380015845.01.T01:CDS 55.0%
! CCAAATTCACTGGCCGACTC+TGG - Chr3:75805857-75805876 None:intergenic 55.0%
! GACAAGCCTCATGGTTCTGC+TGG + Chr3:75805340-75805359 MsG0380015844.01.T01:CDS 55.0%
! GGATCTGAGATCGGAACAGC+TGG - Chr3:75807959-75807978 MsG0380015845.01.T01:CDS 55.0%
! GTGACGCGGCAGTTCAGTTT+TGG + Chr3:75808107-75808126 MsG0380015844.01.T01:intron 55.0%
! TACCGCGCCGCGTCAATTTT+TGG - Chr3:75807200-75807219 None:intergenic 55.0%
! TACTGGCGGCAGCTTTTGGT+TGG - Chr3:75807840-75807859 MsG0380015845.01.T01:CDS 55.0%
AATTGACGCGGCGCGGTATG+CGG + Chr3:75807202-75807221 MsG0380015844.01.T01:intron 60.0%
ACGTGCCCATCGTCCAATGG+AGG - Chr3:75809219-75809238 None:intergenic 60.0%
CAATAGGTTCCCTCCACCGG+AGG - Chr3:75809592-75809611 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG + Chr3:75807195-75807214 MsG0380015844.01.T01:intron 60.0%
CCGCGTTTGACAACAGAGGG+TGG + Chr3:75808161-75808180 MsG0380015844.01.T01:intron 60.0%
CGCAGCGCGTTTGGAGAAAG+CGG - Chr3:75808077-75808096 None:intergenic 60.0%
CGGCCGCGTTTGACAACAGA+GGG + Chr3:75808158-75808177 MsG0380015844.01.T01:intron 60.0%
CTTTCTCCAAACGCGCTGCG+CGG + Chr3:75808077-75808096 MsG0380015844.01.T01:intron 60.0%
GACACGTGCCCATCGTCCAA+TGG - Chr3:75809222-75809241 None:intergenic 60.0%
GCAGCGCGTTTGGAGAAAGC+GGG - Chr3:75808076-75808095 None:intergenic 60.0%
GCGGGGGCTATTACATGACG+CGG + Chr3:75807232-75807251 MsG0380015844.01.T01:intron 60.0%
GGACCAAAAGCGGGTCAAGG+CGG - Chr3:75808023-75808042 MsG0380015845.01.T01:CDS 60.0%
GGCACGTGTCCAGGCAAGTT+TGG + Chr3:75809232-75809251 MsG0380015844.01.T01:intron 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG - Chr3:75807198-75807217 None:intergenic 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG - Chr3:75807195-75807214 None:intergenic 60.0%
ACTCCCTGCCCATACCTGCG+AGG + Chr3:75808886-75808905 MsG0380015844.01.T01:intron 65.0%
AGGTCCTCGCAGGTATGGGC+AGG - Chr3:75808893-75808912 None:intergenic 65.0%
ATTGACGCGGCGCGGTATGC+GGG + Chr3:75807203-75807222 MsG0380015844.01.T01:intron 65.0%
CGCAGGTATGGGCAGGGAGT+AGG - Chr3:75808886-75808905 None:intergenic 65.0%
GCGGCCGCGTTTGACAACAG+AGG + Chr3:75808157-75808176 MsG0380015844.01.T01:intron 65.0%
GGCGGACCAAAAGCGGGTCA+AGG - Chr3:75808026-75808045 MsG0380015845.01.T01:CDS 65.0%
GGTCCTCGCAGGTATGGGCA+GGG - Chr3:75808892-75808911 None:intergenic 65.0%
GGTTCCCTCCACCGGAGGTA+AGG - Chr3:75809587-75809606 None:intergenic 65.0%
GTCAAAGCGGAAACGCGGCG+CGG + Chr3:75807164-75807183 MsG0380015844.01.T01:intron 65.0%
TGGACGATGGGCACGTGTCC+AGG + Chr3:75809223-75809242 MsG0380015844.01.T01:CDS 65.0%
TTGTCAAACGCGGCCGCTCC+CGG - Chr3:75808154-75808173 None:intergenic 65.0%
CGGGTTTCGCGGCCGCAATC+CGG - Chr3:75808057-75808076 MsG0380015845.01.T01:CDS 70.0%
GAGCGGGGCGGACCAAAAGC+GGG - Chr3:75808032-75808051 MsG0380015845.01.T01:CDS 70.0%
GGAGCGGGGCGGACCAAAAG+CGG - Chr3:75808033-75808052 MsG0380015845.01.T01:CDS 70.0%
GTTTCGCGGCCGCAATCCGG+TGG - Chr3:75808054-75808073 MsG0380015845.01.T01:CDS 70.0%
TCTCCAAACGCGCTGCGCGG+TGG + Chr3:75808080-75808099 MsG0380015844.01.T01:intron 70.0%
TGCGCGGTGGCGTTGTGACG+CGG + Chr3:75808093-75808112 MsG0380015844.01.T01:intron 70.0%
TTTGGTCCGCCCCGCTCCAC+CGG + Chr3:75808035-75808054 MsG0380015844.01.T01:intron 70.0%
! CGGCCGCCTTGACCCGCTTT+TGG + Chr3:75808017-75808036 MsG0380015844.01.T01:intron 70.0%
ACGCCACCGCGCAGCGCGTT+TGG - Chr3:75808086-75808105 None:intergenic 75.0%
CGCAATCCGGTGGAGCGGGG+CGG - Chr3:75808044-75808063 MsG0380015845.01.T01:CDS 75.0%
CGCCCCGCTCCACCGGATTG+CGG + Chr3:75808042-75808061 MsG0380015844.01.T01:intron 75.0%
CGGCCGCAATCCGGTGGAGC+GGG - Chr3:75808048-75808067 MsG0380015845.01.T01:CDS 75.0%
GCGGCCGCAATCCGGTGGAG+CGG - Chr3:75808049-75808068 MsG0380015845.01.T01:CDS 75.0%
GGCCGCAATCCGGTGGAGCG+GGG - Chr3:75808047-75808066 MsG0380015845.01.T01:CDS 75.0%
! AGCGGAAACGCGGCGCGGCG+CGG + Chr3:75807169-75807188 MsG0380015844.01.T01:intron 80.0%
! CGCGGTATGCGGGCGCGACG+CGG + Chr3:75807213-75807232 MsG0380015844.01.T01:intron 80.0%
! CGGTATGCGGGCGCGACGCG+GGG + Chr3:75807215-75807234 MsG0380015844.01.T01:intron 80.0%
! CTCCCGGCGCTATCGCGGCG+CGG - Chr3:75808138-75808157 None:intergenic 80.0%
! CTCCGCGCCGCGATAGCGCC+GGG + Chr3:75808133-75808152 MsG0380015844.01.T01:intron 80.0%
! GCGGTATGCGGGCGCGACGC+GGG + Chr3:75807214-75807233 MsG0380015844.01.T01:intron 80.0%
! GCTCCGCGCCGCGATAGCGC+CGG + Chr3:75808132-75808151 MsG0380015844.01.T01:intron 80.0%
! GGCCGCTCCCGGCGCTATCG+CGG - Chr3:75808143-75808162 None:intergenic 80.0%
! GGCGCTATCGCGGCGCGGAG+CGG - Chr3:75808133-75808152 None:intergenic 80.0%
! GGTATGCGGGCGCGACGCGG+GGG + Chr3:75807216-75807235 MsG0380015844.01.T01:intron 80.0%
!! CGCCGCGATAGCGCCGGGAG+CGG + Chr3:75808138-75808157 MsG0380015844.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75804358 75810707 75804358 ID=MsG0380015844.01;Name=MsG0380015844.01
Chr3 mRNA 75804358 75810707 75804358 ID=MsG0380015844.01.T01;Parent=MsG0380015844.01;Name=MsG0380015844.01.T01;_AED=0.48;_eAED=0.48;_QI=85|0.5|0.66|1|1|1|9|177|320
Chr3 exon 75804358 75804598 75804358 ID=MsG0380015844.01.T01:exon:1106;Parent=MsG0380015844.01.T01
Chr3 exon 75804685 75804785 75804685 ID=MsG0380015844.01.T01:exon:1107;Parent=MsG0380015844.01.T01
Chr3 exon 75805327 75805405 75805327 ID=MsG0380015844.01.T01:exon:1108;Parent=MsG0380015844.01.T01
Chr3 exon 75806055 75806145 75806055 ID=MsG0380015844.01.T01:exon:1109;Parent=MsG0380015844.01.T01
Chr3 exon 75808256 75808388 75808256 ID=MsG0380015844.01.T01:exon:1110;Parent=MsG0380015844.01.T01
Chr3 exon 75808469 75808616 75808469 ID=MsG0380015844.01.T01:exon:1111;Parent=MsG0380015844.01.T01
Chr3 exon 75809006 75809086 75809006 ID=MsG0380015844.01.T01:exon:1112;Parent=MsG0380015844.01.T01
Chr3 exon 75809176 75809248 75809176 ID=MsG0380015844.01.T01:exon:1113;Parent=MsG0380015844.01.T01
Chr3 exon 75810430 75810707 75810430 ID=MsG0380015844.01.T01:exon:1114;Parent=MsG0380015844.01.T01
Chr3 five_prime_UTR 75804358 75804442 75804358 ID=MsG0380015844.01.T01:five_prime_utr;Parent=MsG0380015844.01.T01
Chr3 CDS 75804443 75804598 75804443 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75804685 75804785 75804685 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75805327 75805405 75805327 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75806055 75806145 75806055 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75808256 75808388 75808256 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75808469 75808616 75808469 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75809006 75809086 75809006 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75809176 75809248 75809176 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 CDS 75810430 75810530 75810430 ID=MsG0380015844.01.T01:cds;Parent=MsG0380015844.01.T01
Chr3 three_prime_UTR 75810531 75810707 75810531 ID=MsG0380015844.01.T01:three_prime_utr;Parent=MsG0380015844.01.T01
Gene Sequence

>MsG0380015844.01.T01

ATGGGAATTGCAGAAGAGAGAGTTGTGGCGGTTATCATGGTTGGAGGACCCACCAAAGGCACTCGATTCCGTCCATTATCATTCAACATTCCTAAACCACTCTTTCCATTAGCTGGACAACCCATGGTTCATCATCCAATCTCTGCTTGTCGAAAAATTCCTAATTTAGCTCGGATTTATCTCATTGGCTTCTACGAAGAACGCGAATTTGCATTATACGTCTCTTCCATCTCCAACGACCTTAAACTCCCTGTTAGATACTTGAAGGAGGACAAGCCTCATGGTTCTGCTGGTGGTCTATATAACTTCAAAGATGTCATCATGGAGGAGGATCCGGTTAGTGACCTTATAAACTGTGGTGTGTATATATTTACACCAGATATCTTTACTGCCATTGAGGGTGTTTCTTCTCAGCGGAAAGACAGAGAAGAGTTCTTCTGTAGGAGTCTACCGGCGAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAACAGTTGTATATATATGAAACCATGGATTTCTGGGAACAAATCAAAACTCCTGGAATGTCCATAAAATGTTCGGCCTTGTATCTTTCACAATTTCGCCACACATCCCCTAACCTATTAGCAAATGGAGATGGTATTAAGAAAGCCTACATCATTGGTGATGTTTATATTCACCCATCAGCAAAGGTGCATCCGTCTGCAAAGATTGGTCCTGGCGTGTCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGACTCATAAATTGTATAGTCCTTGATGATGAGAATGCTGTTGTTCTTCATGCAATTGTTGGATGGAAATCCTCCATTGGACGATGGGCACGTGTCCAGGCAAGTGAATCTGTTGCCGTTGAGGATGAGGTAGTGGTTATTAGTAGCATTGTCCTTCCACACAAGACCTTAAATGTCGGCGTTCAAGATGAGATTCTTTTATAG
Protein sequence

>MsG0380015844.01.T01

MGIAEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACRKIPNLARIYLIGFYEEREFALYVSSISNDLKLPVRYLKEDKPHGSAGGLYNFKDVIMEEDPVSDLINCGVYIFTPDIFTAIEGVSSQRKDREEFFCRSLPANYVRLDQDILSPLAGKKQLYIYETMDFWEQIKTPGMSIKCSALYLSQFRHTSPNLLANGDGIKKAYIIGDVYIHPSAKVHPSAKIGPGVSISANARIGAGARLINCIVLDDENAVVLHAIVGWKSSIGRWARVQASESVAVEDEVVVISSIVLPHKTLNVGVQDEILL*