AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011252.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011252.01.T01 MTR_2g100620 84.818 303 28 2 1 285 1 303 3.23e-175 488
MsG0280011252.01.T01 MTR_8g014910 64.356 303 90 2 1 285 2 304 4.37e-140 399
MsG0280011252.01.T01 MTR_2g084585 49.320 294 131 1 10 285 9 302 1.98e-96 288
MsG0280011252.01.T01 MTR_4g056280 46.758 293 138 2 11 285 10 302 5.58e-86 261
MsG0280011252.01.T01 MTR_4g056160 47.445 274 123 3 28 281 24 296 4.54e-81 248
MsG0280011252.01.T01 MTR_3g082830 41.455 275 143 2 29 285 36 310 1.33e-66 212
MsG0280011252.01.T01 MTR_5g084790 41.699 259 131 3 29 268 30 287 3.82e-64 205
MsG0280011252.01.T01 MTR_5g084750 40.511 274 145 2 29 284 28 301 5.72e-63 202
MsG0280011252.01.T01 MTR_5g084770 37.809 283 153 4 23 284 20 300 2.41e-57 187
MsG0280011252.01.T01 MTR_1g025780 37.545 277 152 4 9 265 17 292 1.12e-56 186
MsG0280011252.01.T01 MTR_3g464730 37.329 292 156 6 1 271 2 287 4.86e-56 184
MsG0280011252.01.T01 MTR_8g075200 35.252 278 157 2 30 284 40 317 7.06e-54 180
MsG0280011252.01.T01 MTR_8g075220 33.922 283 159 4 30 284 39 321 1.76e-51 173
MsG0280011252.01.T01 MTR_5g022630 35.915 284 159 5 9 269 18 301 4.13e-51 172
MsG0280011252.01.T01 MTR_5g074270 36.576 257 144 2 31 268 33 289 1.55e-50 170
MsG0280011252.01.T01 MTR_2g015080 34.256 289 162 5 7 267 14 302 2.86e-50 170
MsG0280011252.01.T01 MTR_1g025760 33.213 277 164 5 9 265 58 333 3.05e-50 171
MsG0280011252.01.T01 MTR_1108s0010 47.674 172 79 1 114 285 1 161 1.39e-49 163
MsG0280011252.01.T01 MTR_1g025700 36.047 258 147 2 26 265 45 302 1.52e-49 168
MsG0280011252.01.T01 MTR_5g022640 35.106 282 161 5 9 268 18 299 3.80e-49 167
MsG0280011252.01.T01 MTR_3g114090 34.082 267 143 4 30 270 35 294 3.17e-48 164
MsG0280011252.01.T01 MTR_3g114120 35.632 261 150 2 26 268 42 302 1.45e-47 163
MsG0280011252.01.T01 MTR_1g025680 35.938 256 145 4 29 265 32 287 2.13e-47 164
MsG0280011252.01.T01 MTR_8g075230 33.813 278 166 3 25 284 30 307 2.95e-47 162
MsG0280011252.01.T01 MTR_1g069175 35.472 265 142 4 31 270 33 293 1.08e-46 160
MsG0280011252.01.T01 MTR_1g025720 34.375 256 146 4 30 265 36 289 1.77e-45 157
MsG0280011252.01.T01 MTR_4g087985 34.082 267 150 4 31 271 36 302 2.08e-45 157
MsG0280011252.01.T01 MTR_1g025910 34.921 252 143 2 36 268 41 290 4.64e-45 156
MsG0280011252.01.T01 MTR_5g083040 32.281 285 159 5 29 284 30 309 3.35e-43 151
MsG0280011252.01.T01 MTR_0565s0010 32.131 305 175 8 3 284 9 304 7.57e-40 142
MsG0280011252.01.T01 MTR_1g079530 34.274 248 140 4 31 257 29 274 3.63e-39 140
MsG0280011252.01.T01 MTR_8g087890 33.451 284 161 7 9 269 9 287 9.12e-39 139
MsG0280011252.01.T01 MTR_2g033920 31.655 278 163 6 29 283 33 306 2.21e-38 139
MsG0280011252.01.T01 MTR_7g116570 32.520 246 143 4 23 247 26 269 5.04e-38 137
MsG0280011252.01.T01 MTR_6g021530 31.560 282 168 6 10 268 7 286 5.86e-38 137
MsG0280011252.01.T01 MTR_2g033920 32.576 264 151 6 29 269 33 292 6.21e-38 136
MsG0280011252.01.T01 MTR_7g116510 30.690 290 171 6 1 268 1 282 1.33e-37 136
MsG0280011252.01.T01 MTR_7g116520 33.473 239 134 5 31 247 34 269 1.48e-37 136
MsG0280011252.01.T01 MTR_4g036375 41.916 167 79 1 12 160 11 177 1.85e-37 131
MsG0280011252.01.T01 MTR_8g079050 31.538 260 149 6 35 267 41 298 2.17e-37 136
MsG0280011252.01.T01 MTR_1g079540 31.660 259 154 5 31 268 31 287 8.87e-37 134
MsG0280011252.01.T01 MTR_1g024890 32.246 276 159 7 15 268 19 288 3.97e-36 132
MsG0280011252.01.T01 MTR_7g116500 30.403 273 156 7 26 269 23 290 5.71e-36 132
MsG0280011252.01.T01 MTR_3g024510 30.405 296 184 7 10 284 15 309 2.09e-35 130
MsG0280011252.01.T01 MTR_8g087870 32.482 274 163 5 3 256 1 272 8.11e-35 129
MsG0280011252.01.T01 MTR_4g122200 30.333 300 171 9 9 278 18 309 2.14e-34 128
MsG0280011252.01.T01 MTR_4g019880 31.111 270 158 7 2 249 6 269 1.37e-33 126
MsG0280011252.01.T01 MTR_2g017875 32.806 253 144 5 27 256 30 279 1.27e-32 123
MsG0280011252.01.T01 MTR_8g074570 29.000 300 184 4 9 284 16 310 2.16e-32 123
MsG0280011252.01.T01 MTR_5g078210 34.496 258 141 10 35 269 29 281 3.11e-32 121
MsG0280011252.01.T01 MTR_6g049220 40.994 161 68 2 26 186 25 158 3.16e-32 117
MsG0280011252.01.T01 MTR_5g078210 34.496 258 141 10 35 269 29 281 5.50e-32 121
MsG0280011252.01.T01 MTR_2g044100 32.812 256 154 5 31 269 43 297 6.24e-32 122
MsG0280011252.01.T01 MTR_6g049230 55.556 99 44 0 187 285 73 171 6.96e-32 117
MsG0280011252.01.T01 MTR_5g009100 28.854 253 157 4 36 267 51 301 2.41e-31 120
MsG0280011252.01.T01 MTR_8g022810 28.996 269 169 7 31 281 41 305 2.74e-31 120
MsG0280011252.01.T01 MTR_3g052580 29.592 294 173 9 3 270 2 287 2.23e-30 117
MsG0280011252.01.T01 MTR_3g052580 29.153 295 173 9 3 270 1 286 3.46e-30 117
MsG0280011252.01.T01 MTR_8g074580 30.314 287 170 5 23 284 36 317 3.53e-30 117
MsG0280011252.01.T01 MTR_8g031390 27.723 303 187 9 7 284 4 299 1.02e-29 114
MsG0280011252.01.T01 MTR_7g008060 30.038 263 142 7 31 269 33 277 1.03e-29 115
MsG0280011252.01.T01 MTR_5g093090 29.720 286 166 8 10 269 11 287 1.35e-29 114
MsG0280011252.01.T01 MTR_3g052490 29.221 308 182 7 5 284 7 306 3.18e-29 114
MsG0280011252.01.T01 MTR_8g031390 27.723 303 187 9 7 284 4 299 3.21e-29 114
MsG0280011252.01.T01 MTR_5g093090 29.236 301 178 8 10 284 11 302 3.35e-29 114
MsG0280011252.01.T01 MTR_8g031420 26.667 300 182 7 9 284 13 298 6.10e-29 113
MsG0280011252.01.T01 MTR_3g005660 31.154 260 155 7 29 265 34 292 6.18e-29 113
MsG0280011252.01.T01 MTR_2g033930 28.417 278 166 7 30 278 31 304 1.38e-28 112
MsG0280011252.01.T01 MTR_8g031430 28.431 306 182 11 7 284 4 300 3.22e-28 111
MsG0280011252.01.T01 MTR_3g021460 31.058 293 170 10 3 269 1 287 1.30e-27 109
MsG0280011252.01.T01 MTR_1g079590 35.955 178 90 5 31 186 31 206 3.01e-27 105
MsG0280011252.01.T01 MTR_8g022790 27.957 279 167 7 31 284 37 306 4.44e-27 108
MsG0280011252.01.T01 MTR_3g052480 28.803 309 183 8 5 284 8 308 4.90e-27 108
MsG0280011252.01.T01 MTR_2g017955 33.043 230 132 6 29 238 31 258 1.53e-26 107
MsG0280011252.01.T01 MTR_3g005650 29.496 278 163 9 10 265 12 278 2.92e-26 106
MsG0280011252.01.T01 MTR_3g435540 32.443 262 142 9 35 269 27 280 6.54e-26 105
MsG0280011252.01.T01 MTR_0009s0250 30.292 274 145 10 22 267 24 279 2.25e-25 103
MsG0280011252.01.T01 MTR_4g035353 28.571 280 171 8 29 284 29 303 3.15e-25 103
MsG0280011252.01.T01 MTR_8g022810 31.343 201 117 6 31 213 41 238 1.19e-24 101
MsG0280011252.01.T01 MTR_8g074560 28.276 290 168 9 12 268 11 293 1.96e-24 101
MsG0280011252.01.T01 MTR_2g017925 32.456 228 132 6 29 236 31 256 2.63e-24 100
MsG0280011252.01.T01 MTR_4g108690 32.296 257 147 8 35 268 31 283 3.40e-24 100
MsG0280011252.01.T01 MTR_3g023220 31.373 255 149 6 29 263 31 279 5.71e-24 99.8
MsG0280011252.01.T01 MTR_2g087292 32.203 236 109 6 29 259 31 220 1.19e-23 97.8
MsG0280011252.01.T01 MTR_2g017915 32.420 219 124 5 29 227 31 245 2.67e-23 98.2
MsG0280011252.01.T01 MTR_2g017965 32.051 234 130 7 29 238 31 259 7.02e-23 97.1
MsG0280011252.01.T01 MTR_8g031400 25.658 304 189 11 9 284 6 300 8.07e-23 97.1
MsG0280011252.01.T01 MTR_1g030268 30.882 272 144 10 30 268 39 299 3.14e-22 94.7
MsG0280011252.01.T01 MTR_2g461580 28.315 279 176 7 27 284 27 302 3.76e-22 94.7
MsG0280011252.01.T01 MTR_3g098270 26.996 263 166 6 31 269 34 294 6.65e-22 94.7
MsG0280011252.01.T01 MTR_1g030268 30.882 272 144 10 30 268 39 299 7.19e-22 94.4
MsG0280011252.01.T01 MTR_1g030220 29.478 268 151 7 31 268 40 299 1.12e-21 94.0
MsG0280011252.01.T01 MTR_2g018015 32.447 188 105 5 29 195 34 220 3.29e-20 88.6
MsG0280011252.01.T01 MTR_1g030275 29.577 284 148 11 23 269 31 299 7.14e-20 89.0
MsG0280011252.01.T01 MTR_5g084880 39.604 101 61 0 169 269 9 109 5.21e-19 81.6
MsG0280011252.01.T01 MTR_5g093090 50.000 94 41 4 10 102 11 99 8.02e-19 83.2
MsG0280011252.01.T01 MTR_7g087190 27.881 269 153 8 30 265 42 302 1.23e-18 85.5
MsG0280011252.01.T01 MTR_1g030230 27.106 273 155 10 29 268 30 291 7.09e-17 80.1
MsG0280011252.01.T01 MTR_0127s0040 32.877 146 91 4 128 269 23 165 1.56e-16 77.4
MsG0280011252.01.T01 MTR_5g087690 24.830 294 176 9 21 285 40 317 2.55e-15 75.9
MsG0280011252.01.T01 MTR_7g033150 24.286 280 152 11 31 265 35 299 9.48e-15 73.9
MsG0280011252.01.T01 MTR_7g116870 24.281 313 194 9 2 284 6 305 9.65e-15 73.9
MsG0280011252.01.T01 MTR_5g062890 56.667 60 25 1 26 84 23 82 5.50e-14 67.0
MsG0280011252.01.T01 MTR_7g113860 26.336 262 149 9 30 258 28 278 7.16e-14 71.2
MsG0280011252.01.T01 MTR_1g030265 34.351 131 76 3 143 268 139 264 2.45e-13 69.7
MsG0280011252.01.T01 MTR_3g463960 25.373 268 164 9 31 268 44 305 2.79e-13 69.7
MsG0280011252.01.T01 MTR_3g463950 25.373 268 164 9 31 268 44 305 2.79e-13 69.7
MsG0280011252.01.T01 MTR_3g463970 25.373 268 164 9 31 268 44 305 2.79e-13 69.7
MsG0280011252.01.T01 MTR_3g463940 25.373 268 164 9 31 268 44 305 2.79e-13 69.7
MsG0280011252.01.T01 MTR_4g056220 45.570 79 43 0 207 285 61 139 6.63e-13 66.6
MsG0280011252.01.T01 MTR_7g033155 23.448 290 157 10 31 267 38 315 8.37e-13 68.6
MsG0280011252.01.T01 MTR_3g463930 26.045 311 173 13 9 268 8 312 1.05e-12 68.2
MsG0280011252.01.T01 MTR_8g028160 25.253 297 167 10 31 284 36 320 1.08e-12 68.2
MsG0280011252.01.T01 MTR_4g036385 45.946 74 40 0 212 285 13 86 1.38e-12 64.3
MsG0280011252.01.T01 MTR_7g113860 25.954 262 150 9 30 258 34 284 1.44e-12 67.8
MsG0280011252.01.T01 MTR_5g074210 34.000 100 65 1 186 284 64 163 3.66e-12 64.7
MsG0280011252.01.T01 MTR_7g111780 26.374 273 149 13 30 269 34 287 6.10e-12 65.5
MsG0280011252.01.T01 MTR_6g007090 26.007 273 154 12 30 267 38 297 1.06e-11 65.1
MsG0280011252.01.T01 MTR_1g082390 25.614 285 142 12 30 269 30 289 1.13e-11 64.7
MsG0280011252.01.T01 MTR_1g092690 24.206 252 169 7 23 265 43 281 8.34e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011252.01.T01 AT3G16370 62.909 275 84 2 28 284 27 301 4.51e-121 350
MsG0280011252.01.T01 AT5G22810 50.179 279 118 3 28 285 31 309 4.99e-95 285
MsG0280011252.01.T01 AT5G03810 50.694 288 120 5 1 268 1 286 1.83e-94 283
MsG0280011252.01.T01 AT5G03820 51.071 280 113 4 10 268 14 290 4.86e-93 279
MsG0280011252.01.T01 AT5G03820 51.071 280 113 4 10 268 42 318 2.96e-92 278
MsG0280011252.01.T01 AT3G53100 46.183 262 121 2 28 270 26 286 1.81e-85 260
MsG0280011252.01.T01 AT2G04570 41.455 275 143 3 29 285 26 300 1.07e-66 212
MsG0280011252.01.T01 AT2G42990 38.909 275 150 3 29 285 26 300 2.40e-61 198
MsG0280011252.01.T01 AT4G26790 38.760 258 140 3 30 269 28 285 8.68e-57 186
MsG0280011252.01.T01 AT4G26790 38.760 258 140 3 30 269 28 285 8.68e-57 186
MsG0280011252.01.T01 AT5G42170 35.842 279 156 3 26 285 45 319 9.75e-56 184
MsG0280011252.01.T01 AT3G14820 35.870 276 155 4 27 284 28 299 5.60e-55 181
MsG0280011252.01.T01 AT5G45960 36.502 263 144 4 29 268 45 307 9.23e-54 179
MsG0280011252.01.T01 AT1G06990 34.892 278 161 4 27 284 33 310 2.02e-53 178
MsG0280011252.01.T01 AT5G63170 38.462 260 136 5 29 268 26 281 2.09e-53 177
MsG0280011252.01.T01 AT1G75880 34.768 302 172 4 9 285 23 324 4.23e-52 175
MsG0280011252.01.T01 AT1G75900 34.173 278 158 3 28 284 40 313 5.55e-52 174
MsG0280011252.01.T01 AT2G24560 38.148 270 144 6 22 269 25 293 6.47e-52 172
MsG0280011252.01.T01 AT3G43550 36.260 262 144 5 26 268 25 282 1.46e-51 171
MsG0280011252.01.T01 AT2G24560 36.491 285 158 6 22 284 25 308 1.68e-51 173
MsG0280011252.01.T01 AT1G75880 34.323 303 173 4 9 285 23 325 2.38e-51 173
MsG0280011252.01.T01 AT1G59406 35.540 287 161 6 1 268 1 282 2.88e-51 172
MsG0280011252.01.T01 AT1G59030 35.540 287 161 6 1 268 1 282 2.88e-51 172
MsG0280011252.01.T01 AT1G58725 35.540 287 161 6 1 268 1 282 2.88e-51 172
MsG0280011252.01.T01 AT1G20120 34.892 278 163 2 26 285 73 350 3.33e-51 173
MsG0280011252.01.T01 AT1G58520 35.878 262 145 5 26 268 25 282 2.05e-50 169
MsG0280011252.01.T01 AT1G58525 35.878 262 145 5 26 268 25 282 2.05e-50 169
MsG0280011252.01.T01 AT1G75890 34.767 279 163 3 26 285 42 320 6.32e-50 169
MsG0280011252.01.T01 AT1G58430 34.859 284 164 4 23 285 27 310 6.71e-50 169
MsG0280011252.01.T01 AT1G75890 33.775 302 175 4 9 285 48 349 1.08e-49 169
MsG0280011252.01.T01 AT2G40250 32.484 314 182 6 1 285 1 313 1.79e-49 167
MsG0280011252.01.T01 AT1G75890 33.904 292 161 4 26 285 42 333 2.18e-48 165
MsG0280011252.01.T01 AT2G31540 33.333 291 163 6 21 285 25 310 5.06e-47 161
MsG0280011252.01.T01 AT5G45950 35.036 274 151 6 29 284 38 302 5.30e-47 161
MsG0280011252.01.T01 AT2G30220 33.882 304 167 8 10 284 9 307 1.44e-46 160
MsG0280011252.01.T01 AT2G30310 33.910 289 162 6 21 284 24 308 2.97e-46 159
MsG0280011252.01.T01 AT1G75920 34.783 276 159 5 12 267 11 285 1.12e-45 157
MsG0280011252.01.T01 AT1G73610 32.215 298 159 6 3 268 1 287 1.63e-43 151
MsG0280011252.01.T01 AT1G75920 33.333 291 158 6 12 267 6 295 3.08e-42 148
MsG0280011252.01.T01 AT1G20135 32.258 279 167 5 10 269 9 284 1.33e-41 146
MsG0280011252.01.T01 AT1G75910 35.135 259 147 5 30 267 27 285 6.25e-41 145
MsG0280011252.01.T01 AT1G75920 33.721 258 155 4 12 267 11 254 1.18e-40 143
MsG0280011252.01.T01 AT1G23500 36.559 279 149 5 9 268 19 288 1.69e-40 144
MsG0280011252.01.T01 AT1G20132 30.943 265 161 4 26 270 56 318 8.54e-40 143
MsG0280011252.01.T01 AT1G20130 32.877 292 159 6 25 285 198 483 2.00e-39 144
MsG0280011252.01.T01 AT1G20130 32.877 292 159 6 25 285 178 463 2.24e-39 144
MsG0280011252.01.T01 AT3G43570 31.801 261 128 5 26 268 25 253 1.56e-38 138
MsG0280011252.01.T01 AT1G29670 31.104 299 179 7 9 284 8 302 1.60e-38 139
MsG0280011252.01.T01 AT1G29670 31.104 299 179 7 9 284 76 370 8.41e-38 138
MsG0280011252.01.T01 AT5G15720 33.218 289 145 9 16 269 14 289 3.20e-36 132
MsG0280011252.01.T01 AT4G28780 30.451 266 162 4 24 268 24 287 8.04e-36 132
MsG0280011252.01.T01 AT5G15720 32.566 304 157 9 16 284 14 304 1.24e-35 131
MsG0280011252.01.T01 AT5G33370 31.559 263 149 7 31 268 30 286 1.30e-35 130
MsG0280011252.01.T01 AT5G33370 30.916 262 152 6 31 268 30 286 4.05e-35 130
MsG0280011252.01.T01 AT4G10950 27.437 277 178 5 29 284 69 343 5.95e-35 130
MsG0280011252.01.T01 AT1G75930 33.955 268 153 6 23 268 21 286 8.00e-35 129
MsG0280011252.01.T01 AT3G50400 30.225 311 181 9 6 282 3 311 1.09e-34 129
MsG0280011252.01.T01 AT3G04290 31.179 263 152 6 31 269 29 286 6.10e-34 127
MsG0280011252.01.T01 AT2G19050 32.099 243 150 6 29 258 29 269 7.15e-34 125
MsG0280011252.01.T01 AT2G23540 31.154 260 150 6 35 267 52 309 9.69e-34 127
MsG0280011252.01.T01 AT4G16230 36.408 206 105 4 29 211 28 230 2.30e-33 122
MsG0280011252.01.T01 AT2G19050 32.099 243 150 6 29 258 29 269 4.18e-33 124
MsG0280011252.01.T01 AT2G19010 31.295 278 161 9 1 258 1 268 6.03e-33 124
MsG0280011252.01.T01 AT2G19010 32.377 244 146 7 30 258 59 298 1.83e-32 123
MsG0280011252.01.T01 AT1G75920 32.906 234 137 4 54 267 24 257 1.88e-32 122
MsG0280011252.01.T01 AT1G29660 28.852 305 194 7 1 284 1 303 2.72e-32 122
MsG0280011252.01.T01 AT5G18430 30.126 239 144 3 31 247 28 265 3.97e-32 122
MsG0280011252.01.T01 AT1G53920 29.496 278 172 6 26 284 43 315 5.17e-32 122
MsG0280011252.01.T01 AT4G10950 27.076 277 175 6 29 284 69 339 6.70e-32 122
MsG0280011252.01.T01 AT2G19060 32.900 231 140 5 28 245 27 255 2.96e-31 119
MsG0280011252.01.T01 AT4G18970 28.214 280 178 5 26 284 23 300 3.67e-31 119
MsG0280011252.01.T01 AT4G18970 28.214 280 178 5 26 284 23 300 6.74e-31 119
MsG0280011252.01.T01 AT5G41890 32.046 259 141 7 35 264 35 287 7.05e-30 116
MsG0280011252.01.T01 AT5G37690 30.233 258 154 6 35 270 31 284 4.34e-29 114
MsG0280011252.01.T01 AT5G45670 26.950 282 185 4 23 284 21 301 1.14e-28 112
MsG0280011252.01.T01 AT5G08460 28.472 288 176 9 9 270 28 311 6.38e-28 111
MsG0280011252.01.T01 AT1G71120 31.439 264 160 7 23 269 23 282 1.09e-27 110
MsG0280011252.01.T01 AT1G71691 29.225 284 166 7 26 284 50 323 8.25e-27 108
MsG0280011252.01.T01 AT1G71691 30.189 265 150 7 26 265 50 304 9.27e-27 106
MsG0280011252.01.T01 AT1G74460 31.802 283 163 9 8 268 5 279 2.45e-26 106
MsG0280011252.01.T01 AT1G33811 29.455 275 150 9 24 264 27 291 3.51e-26 106
MsG0280011252.01.T01 AT1G71250 28.731 268 156 5 29 269 39 298 4.95e-26 105
MsG0280011252.01.T01 AT4G30140 29.185 233 149 6 30 249 32 261 5.05e-26 105
MsG0280011252.01.T01 AT2G31550 31.792 173 106 4 120 285 2 169 2.82e-25 100
MsG0280011252.01.T01 AT5G37690 30.435 253 152 9 35 270 31 276 4.26e-25 102
MsG0280011252.01.T01 AT1G53940 25.510 294 189 7 4 269 3 294 5.19e-22 93.6
MsG0280011252.01.T01 AT1G53940 25.490 306 197 8 4 281 3 305 5.63e-22 94.7
MsG0280011252.01.T01 AT5G40990 25.000 272 185 4 31 284 37 307 1.11e-21 94.0
MsG0280011252.01.T01 AT5G55050 28.839 267 161 9 29 269 37 300 1.51e-21 93.6
MsG0280011252.01.T01 AT3G14225 25.670 261 171 5 31 269 37 296 2.68e-21 92.8
MsG0280011252.01.T01 AT3G14225 25.581 258 171 5 31 269 37 292 4.36e-21 92.0
MsG0280011252.01.T01 AT2G03980 27.068 266 161 7 30 272 42 297 5.38e-19 86.3
MsG0280011252.01.T01 AT2G03980 27.068 266 161 7 30 272 42 297 5.38e-19 86.3
MsG0280011252.01.T01 AT2G03980 27.068 266 161 7 30 272 42 297 5.38e-19 86.3
MsG0280011252.01.T01 AT2G03980 27.068 266 161 7 30 272 42 297 5.38e-19 86.3
MsG0280011252.01.T01 AT1G28610 27.336 289 167 9 31 284 31 311 6.33e-19 86.3
MsG0280011252.01.T01 AT2G27360 28.231 294 160 11 31 284 33 315 9.76e-19 85.9
MsG0280011252.01.T01 AT1G53990 25.338 296 195 8 9 284 9 298 3.02e-18 84.0
MsG0280011252.01.T01 AT1G28640 26.502 283 171 9 31 281 35 312 1.02e-17 82.8
MsG0280011252.01.T01 AT1G28580 27.037 270 162 9 31 269 37 302 1.12e-17 82.8
MsG0280011252.01.T01 AT1G28650 27.622 286 164 11 31 281 37 314 1.87e-17 82.0
MsG0280011252.01.T01 AT1G28570 26.282 312 189 11 8 284 10 315 2.98e-17 81.3
MsG0280011252.01.T01 AT1G54020 26.996 263 158 9 29 278 29 270 1.75e-16 79.0
MsG0280011252.01.T01 AT1G28590 26.277 274 159 9 31 269 36 301 3.28e-16 78.6
MsG0280011252.01.T01 AT1G54010 25.098 255 175 8 29 271 32 282 8.38e-16 77.0
MsG0280011252.01.T01 AT1G54790 26.644 289 166 10 30 284 31 307 1.09e-15 77.0
MsG0280011252.01.T01 AT2G04020 29.902 204 108 6 30 208 42 235 1.77e-15 75.1
MsG0280011252.01.T01 AT4G01130 24.606 317 193 12 3 284 5 310 3.76e-15 75.1
MsG0280011252.01.T01 AT1G28670 26.408 284 171 10 31 281 35 313 4.25e-15 75.1
MsG0280011252.01.T01 AT2G04020 29.902 204 108 6 30 208 42 235 4.75e-15 74.3
MsG0280011252.01.T01 AT3G14220 26.000 250 171 9 30 269 31 276 4.94e-15 74.7
MsG0280011252.01.T01 AT5G15720 33.333 123 79 2 150 269 136 258 8.04e-15 73.9
MsG0280011252.01.T01 AT1G09390 25.660 265 169 6 28 270 34 292 1.22e-14 73.6
MsG0280011252.01.T01 AT4G16220 51.282 78 36 1 29 106 28 103 2.52e-14 71.2
MsG0280011252.01.T01 AT4G01130 24.917 301 180 12 3 268 5 294 2.64e-14 72.4
MsG0280011252.01.T01 AT1G54000 24.324 259 182 8 23 271 28 282 1.20e-13 70.9
MsG0280011252.01.T01 AT1G28660 25.614 285 171 10 31 281 35 312 2.64e-13 69.7
MsG0280011252.01.T01 AT3G26430 26.523 279 161 10 30 274 30 298 2.82e-13 69.7
MsG0280011252.01.T01 AT1G56670 24.627 268 168 8 23 265 32 290 5.30e-13 68.2
MsG0280011252.01.T01 AT1G56670 24.627 268 168 8 23 265 32 290 1.13e-12 67.8
MsG0280011252.01.T01 AT1G31550 26.449 276 155 10 31 269 36 300 1.36e-12 67.8
MsG0280011252.01.T01 AT3G14210 27.068 266 156 11 31 274 36 285 1.48e-12 67.8
MsG0280011252.01.T01 AT1G54030 25.203 246 160 8 32 265 53 286 1.80e-12 67.0
MsG0280011252.01.T01 AT1G54030 24.280 243 166 7 32 265 53 286 1.95e-12 67.4
MsG0280011252.01.T01 AT3G48460 22.491 289 176 9 32 284 39 315 3.12e-12 66.6
MsG0280011252.01.T01 AT1G31550 25.773 291 166 11 31 284 36 313 3.80e-12 66.2
MsG0280011252.01.T01 AT1G28660 25.614 285 170 11 31 281 35 311 4.89e-12 66.2

Find 89 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACAGGACTTGTATAAAT+TGG 0.145557 2:+81476156 MsG0280011252.01.T01:intron
TTTAAGTACATTGGTTAATT+TGG 0.163410 2:+81476811 MsG0280011252.01.T01:three_prime_UTR
AAAACCTCCCAGTGGGTTTA+TGG 0.171244 2:-81475337 None:intergenic
TGTTCAATCCCCTTCAAATT+TGG 0.178360 2:+81476396 MsG0280011252.01.T01:CDS
AAGGATTGACATAATAGTTT+TGG 0.253181 2:-81475915 None:intergenic
GTGACAACTTTGTTGATTAA+AGG 0.259570 2:-81475934 None:intergenic
TTAATTTCACTAAGGAAATA+TGG 0.271641 2:-81476906 None:intergenic
TAAGACCAGGAAGTTGCTTT+TGG 0.276088 2:-81476333 None:intergenic
TTGTGCATCATTGTTGATTC+TGG 0.278755 2:-81476272 None:intergenic
ATTATGTGTGTAACCACTTT+AGG 0.300241 2:+81474967 None:intergenic
AAAGCTAACTATCCTCCTTA+TGG 0.312317 2:+81475299 MsG0280011252.01.T01:CDS
AGGAAAGGCTGCTGTGGAAC+TGG 0.322949 2:+81476528 MsG0280011252.01.T01:CDS
ATGCAACTCAGTATGTGTTT+TGG 0.323360 2:+81476607 MsG0280011252.01.T01:three_prime_UTR
CCTGCTACAAGGACTTTGTT+TGG 0.340385 2:+81476226 MsG0280011252.01.T01:CDS
CAAGGTAGCTGGAAGTAAAA+AGG 0.359520 2:+81475834 MsG0280011252.01.T01:CDS
GGCATAAGCCTTATCGGTTA+AGG 0.371190 2:+81476690 MsG0280011252.01.T01:three_prime_UTR
GAACAAGGCATAAGCCTTAT+CGG 0.374261 2:+81476684 MsG0280011252.01.T01:three_prime_UTR
AAGGCAGCATCAATTATTAA+AGG 0.375056 2:+81475853 MsG0280011252.01.T01:CDS
TTCAACCCTCATTCATCAAT+AGG 0.391362 2:+81475016 MsG0280011252.01.T01:five_prime_UTR
TCACCAAACGTCACGATTGC+CGG 0.392033 2:-81475230 None:intergenic
AAACTCCAAAAGCAACTTCC+TGG 0.409834 2:+81476328 MsG0280011252.01.T01:CDS
ACACAGGACTTGTATAAATT+GGG 0.411497 2:+81476157 MsG0280011252.01.T01:intron
TGGTGACTCTGCTGTGGATG+TGG 0.414876 2:+81475247 MsG0280011252.01.T01:CDS
CAAAATTTGCTCCAATAAGA+AGG 0.415639 2:-81475635 None:intergenic
AAATTAGCTACTGATATTAC+TGG 0.418320 2:+81475368 MsG0280011252.01.T01:CDS
GGTGACTCTGCTGTGGATGT+GGG 0.428006 2:+81475248 MsG0280011252.01.T01:CDS
TATCTTAGCCCTCAAGCAAC+AGG 0.436881 2:+81475607 MsG0280011252.01.T01:CDS
AGATAACACAATACGAATCT+TGG 0.445897 2:-81476929 None:intergenic
TTGTTTGGATTCCATGAGAA+AGG 0.448046 2:+81476241 MsG0280011252.01.T01:CDS
GTTGCATTAGAACAGGTTCC+TGG 0.453335 2:-81476591 None:intergenic
CACTACTTCCACCACTCAAT+AGG 0.457776 2:-81475885 None:intergenic
TCAACCCTCATTCATCAATA+GGG 0.458495 2:+81475017 MsG0280011252.01.T01:five_prime_UTR
AGTACATTGGTTAATTTGGA+AGG 0.468913 2:+81476815 MsG0280011252.01.T01:three_prime_UTR
ATTAAAAGAATGACCTAAAG+TGG 0.472934 2:-81474980 None:intergenic
CTACCTTGGAAAGCTTACTT+TGG 0.474075 2:-81475819 None:intergenic
AATCTTGGTTAATTTCACTA+AGG 0.475390 2:-81476914 None:intergenic
CTAACAAAGTCTCTTCCATA+AGG 0.478982 2:-81475314 None:intergenic
GTTCCGGCAATCGTGACGTT+TGG 0.482783 2:+81475227 MsG0280011252.01.T01:CDS
ATACTGAGTTGCATTAGAAC+AGG 0.482835 2:-81476598 None:intergenic
GTATTGCTTACCAAATTTGA+AGG 0.489058 2:-81476406 None:intergenic
AGTGACTTCACTACCACCAT+TGG 0.497426 2:+81476195 MsG0280011252.01.T01:CDS
AGTAAGCTTTCCAAGGTAGC+TGG 0.499862 2:+81475823 MsG0280011252.01.T01:CDS
GATGAATGAGGGTTGAAGTT+GGG 0.501483 2:-81475010 None:intergenic
ACAAGATGATACTGTTGTTC+CGG 0.501937 2:+81475211 MsG0280011252.01.T01:CDS
TGGTGACACAACCTTTCTCA+TGG 0.505021 2:-81476252 None:intergenic
GGAAAGGCTGCTGTGGAACT+GGG 0.509378 2:+81476529 MsG0280011252.01.T01:CDS
TATTGCTTACCAAATTTGAA+GGG 0.509715 2:-81476405 None:intergenic
AGTGACTTGTTTAAGTACAT+TGG 0.509755 2:+81476802 MsG0280011252.01.T01:three_prime_UTR
AGGTATGCAGAATATTGATC+AGG 0.511148 2:-81475958 None:intergenic
CCAAACAAAGTCCTTGTAGC+AGG 0.515201 2:-81476226 None:intergenic
GTGACTTCACTACCACCATT+GGG 0.516685 2:+81476196 MsG0280011252.01.T01:CDS
AATGACCCTATTGATGAATG+AGG 0.519877 2:-81475022 None:intergenic
TCAATGCATCAGCTAGAACT+TGG 0.522397 2:-81476659 None:intergenic
GCATGAATCCTTAACCGATA+AGG 0.523528 2:-81476698 None:intergenic
GTACATTGGTTAATTTGGAA+GGG 0.526076 2:+81476816 MsG0280011252.01.T01:three_prime_UTR
TCTCTCTAGCTAACAACACT+AGG 0.536448 2:-81475117 None:intergenic
TGATGAATGAGGGTTGAAGT+TGG 0.544791 2:-81475011 None:intergenic
GAGGCAAGGAAAGGCTGCTG+TGG 0.548555 2:+81476522 MsG0280011252.01.T01:CDS
TTTGTTAGCCATAAACCCAC+TGG 0.558300 2:+81475329 MsG0280011252.01.T01:CDS
CCATTGCAAAACCTCCCAGT+GGG 0.560224 2:-81475344 None:intergenic
GCTTGAGGGCTAAGATATGC+AGG 0.564871 2:-81475601 None:intergenic
TGGGTTGCCTACCTGCTACA+AGG 0.564941 2:+81476215 MsG0280011252.01.T01:CDS
GTGACTCTGCTGTGGATGTG+GGG 0.573179 2:+81475249 MsG0280011252.01.T01:CDS
GACGTTTGGTGACTCTGCTG+TGG 0.577397 2:+81475241 MsG0280011252.01.T01:CDS
ACTTGGTTAGCAGCTTCTGA+AGG 0.578036 2:-81476642 None:intergenic
ATTGCTTACCAAATTTGAAG+GGG 0.602299 2:-81476404 None:intergenic
GATTGAACAAGTTCATAGAG+AGG 0.612422 2:-81476382 None:intergenic
ATACCAAAGTAAGCTTTCCA+AGG 0.615809 2:+81475816 MsG0280011252.01.T01:CDS
ACAAAGTCTCTTCCATAAGG+AGG 0.615968 2:-81475311 None:intergenic
TATTTAAAAGAAAATAAACA+TGG 0.617253 2:-81476862 None:intergenic
TAACAACACTAGGTTTCTGA+AGG 0.619039 2:-81475107 None:intergenic
GCAACAGTTAAAATATTACA+AGG 0.623783 2:+81475792 MsG0280011252.01.T01:intron
TTGTGCAATCAAAAGTCACC+AGG 0.626995 2:+81476573 MsG0280011252.01.T01:three_prime_UTR
ATGTACTTAAACAAGTCACT+AGG 0.638387 2:-81476799 None:intergenic
GCAGGTAGGCAACCCAATGG+TGG 0.643466 2:-81476208 None:intergenic
AAGACAACAATCTTAAGACC+AGG 0.651941 2:-81476346 None:intergenic
TTGTTAGCCATAAACCCACT+GGG 0.652946 2:+81475330 MsG0280011252.01.T01:CDS
ATGACCCTATTGATGAATGA+GGG 0.655410 2:-81475021 None:intergenic
AGAATCAACAATGATGCACA+AGG 0.655662 2:+81476274 MsG0280011252.01.T01:CDS
GCTGATGCATTGATTGAACA+AGG 0.656923 2:+81476669 MsG0280011252.01.T01:three_prime_UTR
GCCATTGCAAAACCTCCCAG+TGG 0.660851 2:-81475345 None:intergenic
GTAGCAGGTAGGCAACCCAA+TGG 0.662304 2:-81476211 None:intergenic
ACAAAGTCCTTGTAGCAGGT+AGG 0.673754 2:-81476222 None:intergenic
TTATCGGTTAAGGATTCATG+CGG 0.678552 2:+81476700 MsG0280011252.01.T01:three_prime_UTR
GCATTGTACCTATTGAGTGG+TGG 0.691170 2:+81475877 MsG0280011252.01.T01:CDS
ATTTAACAAGAAAATCAACT+CGG 0.691992 2:+81476297 MsG0280011252.01.T01:CDS
AACTTGAGTATGTATCAACA+AGG 0.714639 2:-81475978 None:intergenic
TTAGCCATAAACCCACTGGG+AGG 0.727905 2:+81475333 MsG0280011252.01.T01:CDS
GGTGCATTGTACCTATTGAG+TGG 0.748700 2:+81475874 MsG0280011252.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAAAAGAAAATAAACA+TGG - Chr2:81476865-81476884 None:intergenic 10.0%
!! GTACAATTGTTATAAATATA+TGG - Chr2:81476043-81476062 None:intergenic 15.0%
!! TGTAGAAAAAATTAATATTG+CGG - Chr2:81475055-81475074 None:intergenic 15.0%
!! AAAAACAAAGCAACTTTAAA+TGG - Chr2:81476135-81476154 None:intergenic 20.0%
!! ATTTAACAAGAAAATCAACT+CGG + Chr2:81476297-81476316 MsG0280011252.01.T01:CDS 20.0%
!! TTAATTTCACTAAGGAAATA+TGG - Chr2:81476909-81476928 None:intergenic 20.0%
!!! AATTTTATTTAATAGGATGC+AGG - Chr2:81476769-81476788 None:intergenic 20.0%
!!! TATGGTTTTCATTAACAAAT+TGG - Chr2:81476891-81476910 None:intergenic 20.0%
!!! TTTAAGTACATTGGTTAATT+TGG + Chr2:81476811-81476830 MsG0280011252.01.T01:three_prime_UTR 20.0%
! AAATTAGCTACTGATATTAC+TGG + Chr2:81475368-81475387 MsG0280011252.01.T01:CDS 25.0%
! AATCTTGGTTAATTTCACTA+AGG - Chr2:81476917-81476936 None:intergenic 25.0%
! ATTAAAAGAATGACCTAAAG+TGG - Chr2:81474983-81475002 None:intergenic 25.0%
! GCAACAGTTAAAATATTACA+AGG + Chr2:81475792-81475811 MsG0280011252.01.T01:intron 25.0%
! TATTGCTTACCAAATTTGAA+GGG - Chr2:81476408-81476427 None:intergenic 25.0%
!! AAATGTTAGTATTTTCTCCA+TGG + Chr2:81475456-81475475 MsG0280011252.01.T01:intron 25.0%
!! AAGGATTGACATAATAGTTT+TGG - Chr2:81475918-81475937 None:intergenic 25.0%
!! AATGTTAGTATTTTCTCCAT+GGG + Chr2:81475457-81475476 MsG0280011252.01.T01:intron 25.0%
!!! ATTAGTATTAGAAGTGTTGA+AGG - Chr2:81475506-81475525 None:intergenic 25.0%
!!! TACATACTCAAGTTTTGTTA+AGG + Chr2:81475987-81476006 MsG0280011252.01.T01:CDS 25.0%
AAATTGGGAGCTAGAAAAAT+TGG + Chr2:81476172-81476191 MsG0280011252.01.T01:CDS 30.0%
AACACAGGACTTGTATAAAT+TGG + Chr2:81476156-81476175 MsG0280011252.01.T01:intron 30.0%
AACAGGAAAAACCTTCTTAT+TGG + Chr2:81475624-81475643 MsG0280011252.01.T01:CDS 30.0%
AACTTGAGTATGTATCAACA+AGG - Chr2:81475981-81476000 None:intergenic 30.0%
AAGGCAGCATCAATTATTAA+AGG + Chr2:81475853-81475872 MsG0280011252.01.T01:CDS 30.0%
ACACAGGACTTGTATAAATT+GGG + Chr2:81476157-81476176 MsG0280011252.01.T01:intron 30.0%
ATGTACTTAAACAAGTCACT+AGG - Chr2:81476802-81476821 None:intergenic 30.0%
ATTGCTTACCAAATTTGAAG+GGG - Chr2:81476407-81476426 None:intergenic 30.0%
GTATTGCTTACCAAATTTGA+AGG - Chr2:81476409-81476428 None:intergenic 30.0%
TCTATCTTGTGACATTCAAT+AGG + Chr2:81476492-81476511 MsG0280011252.01.T01:intron 30.0%
TTATTTGTAACGATGTGGTA+TGG - Chr2:81476110-81476129 None:intergenic 30.0%
! AGTACATTGGTTAATTTGGA+AGG + Chr2:81476815-81476834 MsG0280011252.01.T01:three_prime_UTR 30.0%
! CAAAATTTGCTCCAATAAGA+AGG - Chr2:81475638-81475657 None:intergenic 30.0%
! GTACATTGGTTAATTTGGAA+GGG + Chr2:81476816-81476835 MsG0280011252.01.T01:three_prime_UTR 30.0%
! GTGACAACTTTGTTGATTAA+AGG - Chr2:81475937-81475956 None:intergenic 30.0%
! GTGTTTGCATTTGTGTTTTT+GGG + Chr2:81475176-81475195 MsG0280011252.01.T01:CDS 30.0%
! TGTGTTTGCATTTGTGTTTT+TGG + Chr2:81475175-81475194 MsG0280011252.01.T01:CDS 30.0%
!! AAGTGTTGAAGGTCTTAAAA+GGG - Chr2:81475495-81475514 None:intergenic 30.0%
!! AGTGACTTGTTTAAGTACAT+TGG + Chr2:81476802-81476821 MsG0280011252.01.T01:three_prime_UTR 30.0%
!! TGACTTTTGATTGCACAATA+AGG - Chr2:81476571-81476590 None:intergenic 30.0%
!!! GTTGCTTTGTTTTTTAACAC+AGG + Chr2:81476141-81476160 MsG0280011252.01.T01:intron 30.0%
!!! TATTTTAACTGTTGCGACAA+TGG - Chr2:81475787-81475806 None:intergenic 30.0%
!!! TGGTTTTATTTGTAACGATG+TGG - Chr2:81476115-81476134 None:intergenic 30.0%
AAAGCTAACTATCCTCCTTA+TGG + Chr2:81475299-81475318 MsG0280011252.01.T01:CDS 35.0%
AAGACAACAATCTTAAGACC+AGG - Chr2:81476349-81476368 None:intergenic 35.0%
AATGACCCTATTGATGAATG+AGG - Chr2:81475025-81475044 None:intergenic 35.0%
ACAAGATGATACTGTTGTTC+CGG + Chr2:81475211-81475230 MsG0280011252.01.T01:CDS 35.0%
AGAATCAACAATGATGCACA+AGG + Chr2:81476274-81476293 MsG0280011252.01.T01:CDS 35.0%
AGGTATGCAGAATATTGATC+AGG - Chr2:81475961-81475980 None:intergenic 35.0%
ATACCAAAGTAAGCTTTCCA+AGG + Chr2:81475816-81475835 MsG0280011252.01.T01:CDS 35.0%
ATACTGAGTTGCATTAGAAC+AGG - Chr2:81476601-81476620 None:intergenic 35.0%
ATGACCCTATTGATGAATGA+GGG - Chr2:81475024-81475043 None:intergenic 35.0%
CTAACAAAGTCTCTTCCATA+AGG - Chr2:81475317-81475336 None:intergenic 35.0%
GATTGAACAAGTTCATAGAG+AGG - Chr2:81476385-81476404 None:intergenic 35.0%
TAACAACACTAGGTTTCTGA+AGG - Chr2:81475110-81475129 None:intergenic 35.0%
TCAACCCTCATTCATCAATA+GGG + Chr2:81475017-81475036 MsG0280011252.01.T01:five_prime_UTR 35.0%
TGCATCTGGTTATGATGAAA+AGG + Chr2:81475665-81475684 MsG0280011252.01.T01:intron 35.0%
TGTTCAATCCCCTTCAAATT+TGG + Chr2:81476396-81476415 MsG0280011252.01.T01:CDS 35.0%
TTCAACCCTCATTCATCAAT+AGG + Chr2:81475016-81475035 MsG0280011252.01.T01:five_prime_UTR 35.0%
TTGTTTGGATTCCATGAGAA+AGG + Chr2:81476241-81476260 MsG0280011252.01.T01:CDS 35.0%
! ATGCAACTCAGTATGTGTTT+TGG + Chr2:81476607-81476626 MsG0280011252.01.T01:three_prime_UTR 35.0%
! CTTTTTGTAGCTGATACACT+GGG + Chr2:81475562-81475581 MsG0280011252.01.T01:intron 35.0%
! GTGACATTCAATAGGTTTTG+CGG + Chr2:81476500-81476519 MsG0280011252.01.T01:intron 35.0%
! TCTTTTTGTAGCTGATACAC+TGG + Chr2:81475561-81475580 MsG0280011252.01.T01:intron 35.0%
! TGCAACTCAGTATGTGTTTT+GGG + Chr2:81476608-81476627 MsG0280011252.01.T01:three_prime_UTR 35.0%
! TTATCGGTTAAGGATTCATG+CGG + Chr2:81476700-81476719 MsG0280011252.01.T01:three_prime_UTR 35.0%
!! GAAGTGTTGAAGGTCTTAAA+AGG - Chr2:81475496-81475515 None:intergenic 35.0%
!! TTGTGCATCATTGTTGATTC+TGG - Chr2:81476275-81476294 None:intergenic 35.0%
!!! TGCATTTGTGTTTTTGGGAT+GGG + Chr2:81475181-81475200 MsG0280011252.01.T01:CDS 35.0%
!!! TTGCATTTGTGTTTTTGGGA+TGG + Chr2:81475180-81475199 MsG0280011252.01.T01:CDS 35.0%
AAACTCCAAAAGCAACTTCC+TGG + Chr2:81476328-81476347 MsG0280011252.01.T01:CDS 40.0%
ACAAAGTCTCTTCCATAAGG+AGG - Chr2:81475314-81475333 None:intergenic 40.0%
CAAGGTAGCTGGAAGTAAAA+AGG + Chr2:81475834-81475853 MsG0280011252.01.T01:CDS 40.0%
CTACCTTGGAAAGCTTACTT+TGG - Chr2:81475822-81475841 None:intergenic 40.0%
GATGAATGAGGGTTGAAGTT+GGG - Chr2:81475013-81475032 None:intergenic 40.0%
GCATGAATCCTTAACCGATA+AGG - Chr2:81476701-81476720 None:intergenic 40.0%
TCAATGCATCAGCTAGAACT+TGG - Chr2:81476662-81476681 None:intergenic 40.0%
TCTCTCTAGCTAACAACACT+AGG - Chr2:81475120-81475139 None:intergenic 40.0%
TGATGAATGAGGGTTGAAGT+TGG - Chr2:81475014-81475033 None:intergenic 40.0%
TTCTCCATGGGTTTGAATCT+CGG + Chr2:81475469-81475488 MsG0280011252.01.T01:intron 40.0%
TTGTGCAATCAAAAGTCACC+AGG + Chr2:81476573-81476592 MsG0280011252.01.T01:three_prime_UTR 40.0%
TTGTTAGCCATAAACCCACT+GGG + Chr2:81475330-81475349 MsG0280011252.01.T01:CDS 40.0%
TTTGTTAGCCATAAACCCAC+TGG + Chr2:81475329-81475348 MsG0280011252.01.T01:CDS 40.0%
! AATTTTGCTTCAGCTGCATC+TGG + Chr2:81475651-81475670 MsG0280011252.01.T01:CDS 40.0%
! ACATTCAATAGGTTTTGCGG+AGG + Chr2:81476503-81476522 MsG0280011252.01.T01:intron 40.0%
! CTTTTTACTTCCAGCTACCT+TGG - Chr2:81475836-81475855 None:intergenic 40.0%
! GAACAAGGCATAAGCCTTAT+CGG + Chr2:81476684-81476703 MsG0280011252.01.T01:three_prime_UTR 40.0%
!! AAGGTTTTTCCTGTTGCTTG+AGG - Chr2:81475619-81475638 None:intergenic 40.0%
!! AGGTTTTTCCTGTTGCTTGA+GGG - Chr2:81475618-81475637 None:intergenic 40.0%
!! GCTGATGCATTGATTGAACA+AGG + Chr2:81476669-81476688 MsG0280011252.01.T01:three_prime_UTR 40.0%
!! TAAGACCAGGAAGTTGCTTT+TGG - Chr2:81476336-81476355 None:intergenic 40.0%
!!! CATTTGTGTTTTTGGGATGG+GGG + Chr2:81475183-81475202 MsG0280011252.01.T01:CDS 40.0%
!!! GCATTTGTGTTTTTGGGATG+GGG + Chr2:81475182-81475201 MsG0280011252.01.T01:CDS 40.0%
ACAAAGTCCTTGTAGCAGGT+AGG - Chr2:81476225-81476244 None:intergenic 45.0%
ACTTGGTTAGCAGCTTCTGA+AGG - Chr2:81476645-81476664 None:intergenic 45.0%
AGTAAGCTTTCCAAGGTAGC+TGG + Chr2:81475823-81475842 MsG0280011252.01.T01:CDS 45.0%
AGTGACTTCACTACCACCAT+TGG + Chr2:81476195-81476214 MsG0280011252.01.T01:CDS 45.0%
CACTACTTCCACCACTCAAT+AGG - Chr2:81475888-81475907 None:intergenic 45.0%
CCAAACAAAGTCCTTGTAGC+AGG - Chr2:81476229-81476248 None:intergenic 45.0%
CCTGCTACAAGGACTTTGTT+TGG + Chr2:81476226-81476245 MsG0280011252.01.T01:CDS 45.0%
GCATTGTACCTATTGAGTGG+TGG + Chr2:81475877-81475896 MsG0280011252.01.T01:CDS 45.0%
GGTGCATTGTACCTATTGAG+TGG + Chr2:81475874-81475893 MsG0280011252.01.T01:CDS 45.0%
GTGACTTCACTACCACCATT+GGG + Chr2:81476196-81476215 MsG0280011252.01.T01:CDS 45.0%
GTTGCATTAGAACAGGTTCC+TGG - Chr2:81476594-81476613 None:intergenic 45.0%
TATCTTAGCCCTCAAGCAAC+AGG + Chr2:81475607-81475626 MsG0280011252.01.T01:CDS 45.0%
TGGTGACACAACCTTTCTCA+TGG - Chr2:81476255-81476274 None:intergenic 45.0%
! AAAACCTCCCAGTGGGTTTA+TGG - Chr2:81475340-81475359 None:intergenic 45.0%
! GGCATAAGCCTTATCGGTTA+AGG + Chr2:81476690-81476709 MsG0280011252.01.T01:three_prime_UTR 45.0%
!!! ATTGTAATTTTTTTTTTAAT+AGG + Chr2:81475431-81475450 MsG0280011252.01.T01:intron 5.0%
!!! TTTCTAAAATTTTATTTAAT+AGG - Chr2:81476776-81476795 None:intergenic 5.0%
CCATTGCAAAACCTCCCAGT+GGG - Chr2:81475347-81475366 None:intergenic 50.0%
GCTTGAGGGCTAAGATATGC+AGG - Chr2:81475604-81475623 None:intergenic 50.0%
TCACCAAACGTCACGATTGC+CGG - Chr2:81475233-81475252 None:intergenic 50.0%
TTAGCCATAAACCCACTGGG+AGG + Chr2:81475333-81475352 MsG0280011252.01.T01:CDS 50.0%
! CAATAGGTTTTGCGGAGGCA+AGG + Chr2:81476508-81476527 MsG0280011252.01.T01:intron 50.0%
AGGAAAGGCTGCTGTGGAAC+TGG + Chr2:81476528-81476547 MsG0280011252.01.T01:CDS 55.0%
AGGGCCGAGATTCAAACCCA+TGG - Chr2:81475476-81475495 None:intergenic 55.0%
GCCATTGCAAAACCTCCCAG+TGG - Chr2:81475348-81475367 None:intergenic 55.0%
GGAAAGGCTGCTGTGGAACT+GGG + Chr2:81476529-81476548 MsG0280011252.01.T01:CDS 55.0%
GGTGACTCTGCTGTGGATGT+GGG + Chr2:81475248-81475267 MsG0280011252.01.T01:CDS 55.0%
GTAGCAGGTAGGCAACCCAA+TGG - Chr2:81476214-81476233 None:intergenic 55.0%
GTGACTCTGCTGTGGATGTG+GGG + Chr2:81475249-81475268 MsG0280011252.01.T01:CDS 55.0%
GTTCCGGCAATCGTGACGTT+TGG + Chr2:81475227-81475246 MsG0280011252.01.T01:CDS 55.0%
TGGGTTGCCTACCTGCTACA+AGG + Chr2:81476215-81476234 MsG0280011252.01.T01:CDS 55.0%
TGGTGACTCTGCTGTGGATG+TGG + Chr2:81475247-81475266 MsG0280011252.01.T01:CDS 55.0%
! CCCACTGGGAGGTTTTGCAA+TGG + Chr2:81475344-81475363 MsG0280011252.01.T01:CDS 55.0%
! GACGTTTGGTGACTCTGCTG+TGG + Chr2:81475241-81475260 MsG0280011252.01.T01:CDS 55.0%
! GGTTTTGCGGAGGCAAGGAA+AGG + Chr2:81476513-81476532 MsG0280011252.01.T01:intron 55.0%
GAGGCAAGGAAAGGCTGCTG+TGG + Chr2:81476522-81476541 MsG0280011252.01.T01:CDS 60.0%
GCAGGTAGGCAACCCAATGG+TGG - Chr2:81476211-81476230 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 81474974 81476944 81474974 ID=MsG0280011252.01;Name=MsG0280011252.01
Chr2 mRNA 81474974 81476944 81474974 ID=MsG0280011252.01.T01;Parent=MsG0280011252.01;Name=MsG0280011252.01.T01;_AED=0.15;_eAED=0.15;_QI=169|0.75|0.6|1|0.75|0.8|5|386|285
Chr2 exon 81474974 81475389 81474974 ID=MsG0280011252.01.T01:exon:20248;Parent=MsG0280011252.01.T01
Chr2 exon 81475572 81475672 81475572 ID=MsG0280011252.01.T01:exon:20249;Parent=MsG0280011252.01.T01
Chr2 exon 81475799 81476008 81475799 ID=MsG0280011252.01.T01:exon:20250;Parent=MsG0280011252.01.T01
Chr2 exon 81476163 81476417 81476163 ID=MsG0280011252.01.T01:exon:20251;Parent=MsG0280011252.01.T01
Chr2 exon 81476514 81476944 81476514 ID=MsG0280011252.01.T01:exon:20252;Parent=MsG0280011252.01.T01
Chr2 five_prime_UTR 81474974 81475142 81474974 ID=MsG0280011252.01.T01:five_prime_utr;Parent=MsG0280011252.01.T01
Chr2 CDS 81475143 81475389 81475143 ID=MsG0280011252.01.T01:cds;Parent=MsG0280011252.01.T01
Chr2 CDS 81475572 81475672 81475572 ID=MsG0280011252.01.T01:cds;Parent=MsG0280011252.01.T01
Chr2 CDS 81475799 81476008 81475799 ID=MsG0280011252.01.T01:cds;Parent=MsG0280011252.01.T01
Chr2 CDS 81476163 81476417 81476163 ID=MsG0280011252.01.T01:cds;Parent=MsG0280011252.01.T01
Chr2 CDS 81476514 81476558 81476514 ID=MsG0280011252.01.T01:cds;Parent=MsG0280011252.01.T01
Chr2 three_prime_UTR 81476559 81476944 81476559 ID=MsG0280011252.01.T01:three_prime_utr;Parent=MsG0280011252.01.T01
Gene Sequence

>MsG0280011252.01.T01

ATGAAGATGAATATTAGAGAAGCATTTTTTGTTGTGTTTGCATTTGTGTTTTTGGGATGGGGGAATGCACAAGATGATACTGTTGTTCCGGCAATCGTGACGTTTGGTGACTCTGCTGTGGATGTGGGGAACAATGACTATCTTTTCACTCTTTTTAAAGCTAACTATCCTCCTTATGGAAGAGACTTTGTTAGCCATAAACCCACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATTACTGCTGATACACTGGGTTTTAAGAGTTATGCACCTGCATATCTTAGCCCTCAAGCAACAGGAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCATCTGTTAAAATATTACAAGGAATACCAAAGTAAGCTTTCCAAGGTAGCTGGAAGTAAAAAGGCAGCATCAATTATTAAAGGTGCATTGTACCTATTGAGTGGTGGAAGTAGTGACTTTATCCAAAACTATTATGTCAATCCTTTAATCAACAAAGTTGTCACTCCTGATCAATATTCTGCATACCTTGTTGATACATACTCAAGTTTTGTTAAGGACTTGTATAAATTGGGAGCTAGAAAAATTGGAGTGACTTCACTACCACCATTGGGTTGCCTACCTGCTACAAGGACTTTGTTTGGATTCCATGAGAAAGGTTGTGTCACCAGAATCAACAATGATGCACAAGGATTTAACAAGAAAATCAACTCGGCTACAGCGAAACTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTAATATTTACAAACCTCTCTATGAACTTGTTCAATCCCCTTCAAATTTGGTTTTGCGGAGGCAAGGAAAGGCTGCTGTGGAACTGGGATTGTAG

Protein sequence

>MsG0280011252.01.T01

MKMNIREAFFVVFAFVFLGWGNAQDDTVVPAIVTFGDSAVDVGNNDYLFTLFKANYPPYGRDFVSHKPTGRFCNGKLATDITADTLGFKSYAPAYLSPQATGKTFLLEQILLQLHLLKYYKEYQSKLSKVAGSKKAASIIKGALYLLSGGSSDFIQNYYVNPLINKVVTPDQYSAYLVDTYSSFVKDLYKLGARKIGVTSLPPLGCLPATRTLFGFHEKGCVTRINNDAQGFNKKINSATAKLQKQLPGLKIVVFNIYKPLYELVQSPSNLVLRRQGKAAVELGL*