AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015370.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015370.01.T01 MTR_3g069070 99.446 361 2 0 1 361 1 361 0.0 731
MsG0380015370.01.T01 MTR_5g080770 93.352 361 24 0 1 361 1 361 0.0 687
MsG0380015370.01.T01 MTR_3g069070 99.338 302 2 0 60 361 1 302 0.0 613
MsG0380015370.01.T01 MTR_4g133690 73.130 361 40 3 1 361 1 304 0.0 506
MsG0380015370.01.T01 MTR_3g078570 32.250 400 223 7 3 354 10 409 1.19e-63 208
MsG0380015370.01.T01 MTR_6g008840 32.432 407 226 8 3 361 9 414 1.18e-62 206
MsG0380015370.01.T01 MTR_3g078570 31.755 359 206 6 3 322 10 368 7.38e-57 190
MsG0380015370.01.T01 MTR_4g071670 31.034 232 108 6 168 361 3 220 7.08e-26 103
MsG0380015370.01.T02 MTR_3g069070 99.446 361 2 0 1 361 1 361 0.0 731
MsG0380015370.01.T02 MTR_5g080770 93.352 361 24 0 1 361 1 361 0.0 687
MsG0380015370.01.T02 MTR_3g069070 99.338 302 2 0 60 361 1 302 0.0 613
MsG0380015370.01.T02 MTR_4g133690 73.130 361 40 3 1 361 1 304 0.0 506
MsG0380015370.01.T02 MTR_3g078570 32.250 400 223 7 3 354 10 409 1.19e-63 208
MsG0380015370.01.T02 MTR_6g008840 32.432 407 226 8 3 361 9 414 1.18e-62 206
MsG0380015370.01.T02 MTR_3g078570 31.755 359 206 6 3 322 10 368 7.38e-57 190
MsG0380015370.01.T02 MTR_4g071670 31.034 232 108 6 168 361 3 220 7.08e-26 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015370.01.T01 AT2G39770 91.136 361 32 0 1 361 1 361 0.0 681
MsG0380015370.01.T01 AT2G39770 91.136 361 32 0 1 361 1 361 0.0 681
MsG0380015370.01.T01 AT2G39770 91.136 361 32 0 1 361 1 361 0.0 681
MsG0380015370.01.T01 AT3G55590 83.791 364 56 1 1 361 1 364 0.0 629
MsG0380015370.01.T01 AT4G30570 76.900 329 75 1 21 348 1 329 0.0 519
MsG0380015370.01.T01 AT2G04650 32.570 393 224 7 3 354 8 400 1.90e-65 213
MsG0380015370.01.T01 AT2G04650 32.208 385 222 6 9 354 4 388 5.07e-65 211
MsG0380015370.01.T01 AT1G74910 31.034 406 232 8 3 361 11 415 7.29e-65 212
MsG0380015370.01.T01 AT1G74910 31.034 406 232 8 3 361 11 415 7.29e-65 212
MsG0380015370.01.T01 AT1G74910 30.411 365 216 6 3 329 11 375 5.57e-58 193
MsG0380015370.01.T02 AT2G39770 91.136 361 32 0 1 361 1 361 0.0 681
MsG0380015370.01.T02 AT2G39770 91.136 361 32 0 1 361 1 361 0.0 681
MsG0380015370.01.T02 AT2G39770 91.136 361 32 0 1 361 1 361 0.0 681
MsG0380015370.01.T02 AT3G55590 83.791 364 56 1 1 361 1 364 0.0 629
MsG0380015370.01.T02 AT4G30570 76.900 329 75 1 21 348 1 329 0.0 519
MsG0380015370.01.T02 AT2G04650 32.570 393 224 7 3 354 8 400 1.90e-65 213
MsG0380015370.01.T02 AT2G04650 32.208 385 222 6 9 354 4 388 5.07e-65 211
MsG0380015370.01.T02 AT1G74910 31.034 406 232 8 3 361 11 415 7.29e-65 212
MsG0380015370.01.T02 AT1G74910 31.034 406 232 8 3 361 11 415 7.29e-65 212
MsG0380015370.01.T02 AT1G74910 30.411 365 216 6 3 329 11 375 5.57e-58 193

Find 34 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAATTGGAAGTTATTTA+TGG 0.139429 3:+69155341 MsG0380015370.01.T01:five_prime_UTR
TGTTCTCTTCCAGCCTTTCT+TGG 0.191543 3:+69157226 MsG0380015370.01.T01:intron
CTTCTTGACTCGTTCGAGTT+AGG 0.194509 3:+69155486 MsG0380015370.01.T01:five_prime_UTR
TTGATTCTGGTTGGAGGGTT+TGG 0.231295 3:+69157307 MsG0380015370.01.T01:CDS
TTCCTGTCATGCCTATTTAT+AGG 0.233914 3:+69157169 MsG0380015370.01.T01:intron
CACAATGAAGGCATTGATTC+TGG 0.244864 3:+69157294 MsG0380015370.01.T01:exon
CGCCAAACCCTCAATTCTTC+AGG 0.259392 3:+69155522 MsG0380015370.01.T01:five_prime_UTR
TGTTACTTGAAGACTTAAAA+AGG 0.276415 3:+69155267 MsG0380015370.01.T01:five_prime_UTR
TTCTATGCTGTCCTATAAAT+AGG 0.293069 3:-69157180 None:intergenic
TTCTTGACTCGTTCGAGTTA+GGG 0.345159 3:+69155487 MsG0380015370.01.T01:five_prime_UTR
TATAGTTATTCTAATTCAAT+TGG 0.378406 3:+69155328 MsG0380015370.01.T01:five_prime_UTR
AGCAAAATCAACAAGAGGCT+TGG 0.428162 3:-69157362 None:intergenic
AAAGAAACCTGAAGAATTGA+GGG 0.431335 3:-69155529 None:intergenic
AACCTGAAGAATTGAGGGTT+TGG 0.432730 3:-69155524 None:intergenic
CAAGCCCATGATTCTGCATC+AGG 0.436008 3:+69157387 MsG0380015370.01.T01:CDS
AAAAGAAACCTGAAGAATTG+AGG 0.451583 3:-69155530 None:intergenic
GCAAAATCAACAAGAGGCTT+GGG 0.462216 3:-69157361 None:intergenic
CCTTACCTGATGCAGAATCA+TGG 0.467053 3:-69157392 None:intergenic
TTGGGAACGCTGAGTGTCAA+TGG 0.493354 3:-69157343 None:intergenic
TGAAGCAGACCAAGAAAGGC+TGG 0.501874 3:-69157235 None:intergenic
AATTGGAAGTTATTTATGGA+TGG 0.510192 3:+69155345 MsG0380015370.01.T01:five_prime_UTR
TGGTTGGAGGGTTTGGAACA+AGG 0.517924 3:+69157314 MsG0380015370.01.T01:CDS
GAGGGTTTGGAACAAGGTTG+AGG 0.519056 3:+69157320 MsG0380015370.01.T01:CDS
ATGAAGGCATTGATTCTGGT+TGG 0.520723 3:+69157298 MsG0380015370.01.T01:CDS
CAAAGGTCACATCACAATGA+AGG 0.540103 3:+69157282 MsG0380015370.01.T01:exon
ATGAGGTGTTACGATTGTAT+TGG 0.541000 3:-69155400 None:intergenic
AGGCATTGATTCTGGTTGGA+GGG 0.546975 3:+69157302 MsG0380015370.01.T01:CDS
AAGGCATTGATTCTGGTTGG+AGG 0.548820 3:+69157301 MsG0380015370.01.T01:CDS
ACGATTGTATTGGTCAATGT+TGG 0.561076 3:-69155390 None:intergenic
CTTACCTGATGCAGAATCAT+GGG 0.572676 3:-69157391 None:intergenic
CGACGATAGTCCAATAAACA+AGG 0.605330 3:+69155235 None:intergenic
TTGTTAGCAAAATCAACAAG+AGG 0.621493 3:-69157367 None:intergenic
CAAGAAGACGAGTTAGAGTG+AGG 0.652032 3:-69155470 None:intergenic
TGGAATGGTGAAACTGAATG+AGG 0.696240 3:-69155417 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATGTATTCATTTCATT+TGG + Chr3:69159555-69159574 MsG0380015370.01.T01:three_prime_UTR 15.0%
!! AAGAACAAAAAAAAAAAAAC+TGG - Chr3:69155440-69155459 None:intergenic 15.0%
!! TATAGTTATTCTAATTCAAT+TGG + Chr3:69155328-69155347 MsG0380015370.01.T01:five_prime_UTR 15.0%
!!! AGATAAAAGTTAAGTTTTTA+GGG + Chr3:69157004-69157023 MsG0380015370.01.T01:intron 15.0%
!!! TAGATAAAAGTTAAGTTTTT+AGG + Chr3:69157003-69157022 MsG0380015370.01.T01:intron 15.0%
!!! TATATAAAGTTGGTTTTTTT+AGG + Chr3:69155818-69155837 MsG0380015370.01.T01:intron 15.0%
!! ATATTTGAAAAACTAATCTC+CGG - Chr3:69156035-69156054 None:intergenic 20.0%
!! ATTATTGGTATATTCAAACA+AGG - Chr3:69156690-69156709 None:intergenic 20.0%
!! ATTCAATTGGAAGTTATTTA+TGG + Chr3:69155341-69155360 MsG0380015370.01.T01:five_prime_UTR 20.0%
!! ATTTGCATAAATAAAACTAC+TGG - Chr3:69157119-69157138 None:intergenic 20.0%
!! CAAAAAAAAAAAAACTGGAA+TGG - Chr3:69155435-69155454 None:intergenic 20.0%
!! CCATAATTTATAAAGTTGAA+AGG + Chr3:69159652-69159671 MsG0380015370.01.T01:three_prime_UTR 20.0%
!! CCTTTCAACTTTATAAATTA+TGG - Chr3:69159655-69159674 None:intergenic 20.0%
!! GATTGAGAACTAATAATAAA+CGG - Chr3:69155596-69155615 None:intergenic 20.0%
!! TATACTTTGACATACTAAAA+TGG - Chr3:69157721-69157740 None:intergenic 20.0%
!! TATCTGCAAAACAAATTAAA+AGG - Chr3:69158310-69158329 None:intergenic 20.0%
!! TGGTGGAAATTATTTAAAAA+AGG + Chr3:69155756-69155775 MsG0380015370.01.T01:intron 20.0%
!! TGTTGAGATATATATAAAGT+TGG + Chr3:69155808-69155827 MsG0380015370.01.T01:intron 20.0%
!! TTGTTTGAATATACCAATAA+TGG + Chr3:69156689-69156708 MsG0380015370.01.T01:intron 20.0%
!!! AAATCAACTTGTTGAAATTT+GGG - Chr3:69157973-69157992 None:intergenic 20.0%
!!! CAGAATTTTCTTATTATTTG+AGG + Chr3:69159737-69159756 MsG0380015370.01.T01:three_prime_UTR 20.0%
!!! GATTAGTTTTTCAAATATGT+CGG + Chr3:69156037-69156056 MsG0380015370.01.T01:intron 20.0%
!!! GGCTTTTTTATAAAATTTTC+AGG - Chr3:69156210-69156229 None:intergenic 20.0%
!!! TAAATCAACTTGTTGAAATT+TGG - Chr3:69157974-69157993 None:intergenic 20.0%
!!! TTCAAAACATTTAATTTTCC+TGG + Chr3:69157254-69157273 MsG0380015370.01.T01:five_prime_UTR 20.0%
! AAACAAAAAGCTATATGCAA+TGG + Chr3:69159012-69159031 MsG0380015370.01.T01:CDS 25.0%
! AATTCAAGAAACTCAAGAAA+CGG - Chr3:69157429-69157448 None:intergenic 25.0%
! AATTCTATCATTTCTTTGAG+TGG - Chr3:69158671-69158690 None:intergenic 25.0%
! AATTGGAAGTTATTTATGGA+TGG + Chr3:69155345-69155364 MsG0380015370.01.T01:five_prime_UTR 25.0%
! AGGGAGAAAATATAACATAT+AGG - Chr3:69157506-69157525 None:intergenic 25.0%
! ATTAAAAGGAAAAACACATG+AGG - Chr3:69158296-69158315 None:intergenic 25.0%
! TATTTGAAAAACTAATCTCC+GGG - Chr3:69156034-69156053 None:intergenic 25.0%
! TCAATTAAGCTTAAGATACA+AGG - Chr3:69156918-69156937 None:intergenic 25.0%
! TGGATAATGTTAAGTTCTTA+GGG + Chr3:69156892-69156911 MsG0380015370.01.T01:intron 25.0%
! TTGGATAATGTTAAGTTCTT+AGG + Chr3:69156891-69156910 MsG0380015370.01.T01:intron 25.0%
!! ACAATTTTTCATATCCAACA+AGG + Chr3:69157640-69157659 MsG0380015370.01.T01:intron 25.0%
!! ATTATTTGAGGTCACAAAAT+TGG + Chr3:69159749-69159768 MsG0380015370.01.T01:three_prime_UTR 25.0%
!! TGTTACTTGAAGACTTAAAA+AGG + Chr3:69155267-69155286 MsG0380015370.01.T01:five_prime_UTR 25.0%
!! TTATTTGAGGTCACAAAATT+GGG + Chr3:69159750-69159769 MsG0380015370.01.T01:three_prime_UTR 25.0%
!!! AAAGTTGGTTTTTTTAGGTT+AGG + Chr3:69155823-69155842 MsG0380015370.01.T01:intron 25.0%
!!! AATCAACTTGTTGAAATTTG+GGG - Chr3:69157972-69157991 None:intergenic 25.0%
!!! GATTGTTTGTGTTTTTTGAT+TGG + Chr3:69155684-69155703 MsG0380015370.01.T01:intron 25.0%
!!! GTTTTAGGTTAATATAGTGT+GGG + Chr3:69158031-69158050 MsG0380015370.01.T01:intron 25.0%
!!! TAGGGTTTTTAAGATCAAAT+GGG + Chr3:69155969-69155988 MsG0380015370.01.T01:intron 25.0%
!!! TGCTTTTAATTCAAGCTTTT+TGG + Chr3:69155736-69155755 MsG0380015370.01.T01:intron 25.0%
!!! TGTTTTAGGTTAATATAGTG+TGG + Chr3:69158030-69158049 MsG0380015370.01.T01:intron 25.0%
!!! TTAATTTGTTTTGCAGATAG+AGG + Chr3:69158311-69158330 MsG0380015370.01.T01:intron 25.0%
!!! TTAGGGTTTTTAAGATCAAA+TGG + Chr3:69155968-69155987 MsG0380015370.01.T01:intron 25.0%
!!! TTTTAATTCAAGCTTTTTGG+TGG + Chr3:69155739-69155758 MsG0380015370.01.T01:intron 25.0%
!!! TTTTTTTAGGTTAGGACAAA+TGG + Chr3:69155831-69155850 MsG0380015370.01.T01:intron 25.0%
AAAACTTTACCGACACTATT+AGG + Chr3:69155950-69155969 MsG0380015370.01.T01:intron 30.0%
AAAAGAAACCTGAAGAATTG+AGG - Chr3:69155533-69155552 None:intergenic 30.0%
AAAATTCACTAACTCCAAAC+AGG - Chr3:69156377-69156396 None:intergenic 30.0%
AAACTATTTAATCGTGCAGA+AGG - Chr3:69156720-69156739 None:intergenic 30.0%
AAACTTTACCGACACTATTA+GGG + Chr3:69155951-69155970 MsG0380015370.01.T01:intron 30.0%
AAAGAAACCTGAAGAATTGA+GGG - Chr3:69155532-69155551 None:intergenic 30.0%
AACCTAAAACACGTTAATGA+TGG - Chr3:69158021-69158040 None:intergenic 30.0%
AATTACCTTTGTCACCATTA+TGG - Chr3:69158720-69158739 None:intergenic 30.0%
ACACAAACAATCAGATCTAA+TGG - Chr3:69155676-69155695 None:intergenic 30.0%
AGGCTGCAATCAATAATAAA+AGG - Chr3:69159584-69159603 None:intergenic 30.0%
AGTTAGTGGAATGTAACATA+AGG + Chr3:69155921-69155940 MsG0380015370.01.T01:intron 30.0%
ATAGAATTCCACAAATCTCA+TGG + Chr3:69158683-69158702 MsG0380015370.01.T01:CDS 30.0%
ATGGTGACAAAGGTAATTAA+CGG + Chr3:69158722-69158741 MsG0380015370.01.T01:intron 30.0%
ATTACAAGAATCATAGACGT+AGG - Chr3:69156839-69156858 None:intergenic 30.0%
ATTCAAGAAACTCAAGAAAC+GGG - Chr3:69157428-69157447 None:intergenic 30.0%
CAATTGAAACAAAGTTGCTT+CGG + Chr3:69156122-69156141 MsG0380015370.01.T01:intron 30.0%
CTTAAAAACCCTAATAGTGT+CGG - Chr3:69155962-69155981 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + Chr3:69157901-69157920 MsG0380015370.01.T01:intron 30.0%
GAAATATGGTGTAGTTGTTA+TGG + Chr3:69158829-69158848 MsG0380015370.01.T01:CDS 30.0%
GTATATTCAAACAAGGATCA+TGG - Chr3:69156683-69156702 None:intergenic 30.0%
GTTGATATGGTTAATCAATG+TGG + Chr3:69156341-69156360 MsG0380015370.01.T01:intron 30.0%
TCAACTAAGCTTAAGATACA+AGG - Chr3:69157030-69157049 None:intergenic 30.0%
TCAATATGATCCAAAACTGA+GGG - Chr3:69158944-69158963 None:intergenic 30.0%
TGGATATGAAAAATTGTTGC+AGG - Chr3:69157637-69157656 None:intergenic 30.0%
TGTAAACTTCATCAGATACA+TGG - Chr3:69159396-69159415 None:intergenic 30.0%
TTCAATATGATCCAAAACTG+AGG - Chr3:69158945-69158964 None:intergenic 30.0%
TTCTATGCTGTCCTATAAAT+AGG - Chr3:69157183-69157202 None:intergenic 30.0%
TTGTTAGCAAAATCAACAAG+AGG - Chr3:69157370-69157389 None:intergenic 30.0%
! ACAGAAAGCTAGTTTATCTA+GGG - Chr3:69156601-69156620 None:intergenic 30.0%
! ATTTTCTGAATGAGTTGTGT+TGG + Chr3:69157742-69157761 MsG0380015370.01.T01:intron 30.0%
! CTTTACTTTGAAAGCCATAT+AGG + Chr3:69156465-69156484 MsG0380015370.01.T01:intron 30.0%
! TAATTTTCCTGGAAAAGCAA+AGG + Chr3:69157265-69157284 MsG0380015370.01.T01:five_prime_UTR 30.0%
!! ACAATTTTTCGCACTTTTTG+AGG - Chr3:69158094-69158113 None:intergenic 30.0%
!! TAGTTTTTCAAATATGTCGG+TGG + Chr3:69156040-69156059 MsG0380015370.01.T01:intron 30.0%
!! TATCGCAAAACTTGTTGATA+TGG + Chr3:69156328-69156347 MsG0380015370.01.T01:intron 30.0%
!! TCATTTTTGTCATGTTCACA+AGG + Chr3:69155614-69155633 MsG0380015370.01.T01:intron 30.0%
!! TTTTTGTTTGCTGCAATCTT+TGG - Chr3:69159001-69159020 None:intergenic 30.0%
!!! AATAGTGTCGGTAAAGTTTT+TGG - Chr3:69155950-69155969 None:intergenic 30.0%
!!! AGGGTTTTTAAGATCAAATG+GGG + Chr3:69155970-69155989 MsG0380015370.01.T01:intron 30.0%
!!! ATAAAAAAGCCGTTTTTCCA+TGG + Chr3:69156219-69156238 MsG0380015370.01.T01:intron 30.0%
!!! GTCTTTTTTCTTTCTGCTTT+TGG + Chr3:69156872-69156891 MsG0380015370.01.T01:intron 30.0%
AAGAATCATAGACGTAGGAA+CGG - Chr3:69156834-69156853 None:intergenic 35.0%
AAGCCATATAGGAAATCTTC+TGG + Chr3:69156476-69156495 MsG0380015370.01.T01:intron 35.0%
AATTCAACATCACCTACAAG+AGG - Chr3:69158487-69158506 None:intergenic 35.0%
ACAACTACACCATATTTCGA+TGG - Chr3:69158827-69158846 None:intergenic 35.0%
ACCTCTTTCTCAATAGAAGT+GGG - Chr3:69158974-69158993 None:intergenic 35.0%
ACGTGAATATGTGACCTAAT+CGG + Chr3:69156289-69156308 MsG0380015370.01.T01:intron 35.0%
AGCTAGTATCATTTCATAGC+TGG + Chr3:69156757-69156776 MsG0380015370.01.T01:intron 35.0%
ATGCCAGAAGATTTCCTATA+TGG - Chr3:69156482-69156501 None:intergenic 35.0%
ATGGTTAATCAATGTGGCAA+AGG + Chr3:69156347-69156366 MsG0380015370.01.T01:intron 35.0%
CAAAATTGGGATTCTTTGAC+AGG + Chr3:69159763-69159782 MsG0380015370.01.T01:three_prime_UTR 35.0%
CAATATGATCCAAAACTGAG+GGG - Chr3:69158943-69158962 None:intergenic 35.0%
CACACTACATGCTAAGAATT+TGG - Chr3:69159502-69159521 None:intergenic 35.0%
CACTGAAAATTACACAGCTT+TGG - Chr3:69159710-69159729 None:intergenic 35.0%
CTAAAACACGTTAATGATGG+AGG - Chr3:69158018-69158037 None:intergenic 35.0%
CTAACATTGCCATGGAAAAA+CGG - Chr3:69156231-69156250 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - Chr3:69157948-69157967 None:intergenic 35.0%
CTAATGGCTAGCACATAATT+TGG - Chr3:69155660-69155679 None:intergenic 35.0%
CTACATGCTAAGAATTTGGA+AGG - Chr3:69159498-69159517 None:intergenic 35.0%
GAATTTCTTGAAGGACTTTG+AGG + Chr3:69158502-69158521 MsG0380015370.01.T01:CDS 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + Chr3:69157904-69157923 MsG0380015370.01.T01:intron 35.0%
GCAAGATATTTCAGCAGAAT+GGG + Chr3:69157580-69157599 MsG0380015370.01.T01:intron 35.0%
GGAAGTAAAAGCGAATCAAA+AGG - Chr3:69156813-69156832 None:intergenic 35.0%
GGTGATGTTGAATTTCTTGA+AGG + Chr3:69158493-69158512 MsG0380015370.01.T01:intron 35.0%
TAACTAGGTTTGGCTACTAA+GGG - Chr3:69156412-69156431 None:intergenic 35.0%
TCAGTGTCTATGTAAAGAGT+TGG + Chr3:69159675-69159694 MsG0380015370.01.T01:three_prime_UTR 35.0%
TCGCTGTTGAGAACAAAAAA+TGG - Chr3:69158632-69158651 None:intergenic 35.0%
TCTCAAGAAACTGAACCATT+GGG + Chr3:69158551-69158570 MsG0380015370.01.T01:CDS 35.0%
TCTGATGAAGTTTACAGCAA+TGG + Chr3:69159400-69159419 MsG0380015370.01.T01:CDS 35.0%
TGCAAGATATTTCAGCAGAA+TGG + Chr3:69157579-69157598 MsG0380015370.01.T01:intron 35.0%
TGGTCATTACAGCTTAACTT+TGG - Chr3:69156656-69156675 None:intergenic 35.0%
TGGTTAATCAATGTGGCAAA+GGG + Chr3:69156348-69156367 MsG0380015370.01.T01:intron 35.0%
TTCAAGAAACTCAAGAAACG+GGG - Chr3:69157427-69157446 None:intergenic 35.0%
TTCATTGAGAATGACTGACA+CGG - Chr3:69158420-69158439 None:intergenic 35.0%
TTCCTGTCATGCCTATTTAT+AGG + Chr3:69157169-69157188 MsG0380015370.01.T01:intron 35.0%
TTGGCAACAAAATCAATGCT+GGG + Chr3:69158903-69158922 MsG0380015370.01.T01:CDS 35.0%
TTGTTGCCAACAAACAACTT+GGG - Chr3:69158893-69158912 None:intergenic 35.0%
TTTGTTGCCAACAAACAACT+TGG - Chr3:69158894-69158913 None:intergenic 35.0%
! AATCTTCTGGCATTGAAAGA+AGG + Chr3:69156489-69156508 MsG0380015370.01.T01:intron 35.0%
! ACAGGAACAAATAACTTGCA+AGG - Chr3:69157156-69157175 None:intergenic 35.0%
! ACAGGTAAACTTCCTTTTAG+TGG + Chr3:69159781-69159800 MsG0380015370.01.T01:three_prime_UTR 35.0%
! ACGATTGTATTGGTCAATGT+TGG - Chr3:69155393-69155412 None:intergenic 35.0%
! ATGAGGTGTTACGATTGTAT+TGG - Chr3:69155403-69155422 None:intergenic 35.0%
! CACAGAAAGCTAGTTTATCT+AGG - Chr3:69156602-69156621 None:intergenic 35.0%
! CTCCATCATTAACGTGTTTT+AGG + Chr3:69158016-69158035 MsG0380015370.01.T01:intron 35.0%
!! AACTGACTTTTACAATGTGC+AGG - Chr3:69159613-69159632 None:intergenic 35.0%
!! ACTGACTTTTACAATGTGCA+GGG - Chr3:69159612-69159631 None:intergenic 35.0%
!! TTTCGCACTTTTTGAGGAAA+GGG - Chr3:69158088-69158107 None:intergenic 35.0%
!! TTTTCGCACTTTTTGAGGAA+AGG - Chr3:69158089-69158108 None:intergenic 35.0%
!!! CTTGTTTTGATTTCCTTGTG+GGG - Chr3:69159439-69159458 None:intergenic 35.0%
!!! GCTTGTTTTGATTTCCTTGT+GGG - Chr3:69159440-69159459 None:intergenic 35.0%
!!! GGGTTTTTAAGATCAAATGG+GGG + Chr3:69155971-69155990 MsG0380015370.01.T01:intron 35.0%
!!! TGCTTGTTTTGATTTCCTTG+TGG - Chr3:69159441-69159460 None:intergenic 35.0%
AAACCATCTCTGATTTACCC+AGG - Chr3:69157470-69157489 None:intergenic 40.0%
AACAAATTTCTCAACCTGCC+CGG - Chr3:69158864-69158883 None:intergenic 40.0%
AACCTGAAGAATTGAGGGTT+TGG - Chr3:69155527-69155546 None:intergenic 40.0%
AACTAATCTCCGGGTTTGAA+TGG - Chr3:69156025-69156044 None:intergenic 40.0%
AATCCAGAGATAGTCATGTG+AGG + Chr3:69159466-69159485 MsG0380015370.01.T01:CDS 40.0%
AATCCAGCAAGATTCTACGT+TGG - Chr3:69157672-69157691 None:intergenic 40.0%
ACACAAGATTGAGTCCGATT+AGG - Chr3:69156306-69156325 None:intergenic 40.0%
ACCCACTTCTATTGAGAAAG+AGG + Chr3:69158970-69158989 MsG0380015370.01.T01:CDS 40.0%
ACCGAGAAAAACTAATCTCC+GGG - Chr3:69156082-69156101 None:intergenic 40.0%
AGACCTGTTATATAGTCCCT+TGG - Chr3:69159070-69159089 None:intergenic 40.0%
AGCAAAATCAACAAGAGGCT+TGG - Chr3:69157365-69157384 None:intergenic 40.0%
AGCTTCAGCTATACCCTAAT+GGG + Chr3:69155876-69155895 MsG0380015370.01.T01:intron 40.0%
AGCTTCCATAATGGTGACAA+AGG + Chr3:69158712-69158731 MsG0380015370.01.T01:CDS 40.0%
AGGAAAAACACATGAGGTGA+TGG - Chr3:69158290-69158309 None:intergenic 40.0%
AGGTTAGGACAAATGGATCT+AGG + Chr3:69155838-69155857 MsG0380015370.01.T01:intron 40.0%
AGTAGCCAAACCTAGTTACT+TGG + Chr3:69156414-69156433 MsG0380015370.01.T01:intron 40.0%
ATACATGGACATCTTCTCCA+AGG - Chr3:69159381-69159400 None:intergenic 40.0%
ATAGAGGCTCTTAAGGACAT+TGG + Chr3:69158327-69158346 MsG0380015370.01.T01:CDS 40.0%
ATCACATTCCCCAAAATGTG+AGG - Chr3:69159148-69159167 None:intergenic 40.0%
ATCTACTCACAGACAGCAAA+GGG - Chr3:69158200-69158219 None:intergenic 40.0%
ATTCACGTGTACCATAACAG+AGG - Chr3:69156277-69156296 None:intergenic 40.0%
ATTGGACCTGATGTTGCAAT+TGG + Chr3:69159205-69159224 MsG0380015370.01.T01:CDS 40.0%
CAAAGGTCACATCACAATGA+AGG + Chr3:69157282-69157301 MsG0380015370.01.T01:exon 40.0%
CACCGAGAAAAACTAATCTC+CGG - Chr3:69156083-69156102 None:intergenic 40.0%
CACCTCTTTCTCAATAGAAG+TGG - Chr3:69158975-69158994 None:intergenic 40.0%
CTAACCAAAGGTCGCAATTT+AGG - Chr3:69157802-69157821 None:intergenic 40.0%
CTCAAGAAACTGAACCATTG+GGG + Chr3:69158552-69158571 MsG0380015370.01.T01:CDS 40.0%
CTCTCAAGAAACTGAACCAT+TGG + Chr3:69158550-69158569 MsG0380015370.01.T01:CDS 40.0%
CTTACCTGATGCAGAATCAT+GGG - Chr3:69157394-69157413 None:intergenic 40.0%
GAAGAAGACTTCTTCCAAGT+TGG + Chr3:69159114-69159133 MsG0380015370.01.T01:CDS 40.0%
GAATTCCACAAATCTCATGG+AGG + Chr3:69158686-69158705 MsG0380015370.01.T01:CDS 40.0%
GAGAAACCCAAGTTGTTTGT+TGG + Chr3:69158884-69158903 MsG0380015370.01.T01:CDS 40.0%
GAGTACTATCTATCCGATGT+GGG - Chr3:69157882-69157901 None:intergenic 40.0%
GATGAAGTTTACAGCAATGG+TGG + Chr3:69159403-69159422 MsG0380015370.01.T01:CDS 40.0%
GCAAAATCAACAAGAGGCTT+GGG - Chr3:69157364-69157383 None:intergenic 40.0%
GCATTCAACTGTTGGTCAAT+GGG + Chr3:69159333-69159352 MsG0380015370.01.T01:CDS 40.0%
GTAACTAGGTTTGGCTACTA+AGG - Chr3:69156413-69156432 None:intergenic 40.0%
GTCCTATAAATAGGCATGAC+AGG - Chr3:69157174-69157193 None:intergenic 40.0%
GTGGAGAATATGACTATCCT+TGG + Chr3:69159361-69159380 MsG0380015370.01.T01:CDS 40.0%
GTTGGCAACAAAATCAATGC+TGG + Chr3:69158902-69158921 MsG0380015370.01.T01:CDS 40.0%
GTTGTTATGGAAGAGACTAC+CGG + Chr3:69158842-69158861 MsG0380015370.01.T01:CDS 40.0%
TAGCTTCAGCTATACCCTAA+TGG + Chr3:69155875-69155894 MsG0380015370.01.T01:intron 40.0%
TAGGGTATAGCTGAAGCTAA+AGG - Chr3:69155874-69155893 None:intergenic 40.0%
TCAATTACCAACCAGAGGTA+TGG + Chr3:69158373-69158392 MsG0380015370.01.T01:intron 40.0%
TCACATTCCCCAAAATGTGA+GGG - Chr3:69159147-69159166 None:intergenic 40.0%
TCTCAAAGCCAACACAATGA+AGG - Chr3:69157846-69157865 None:intergenic 40.0%
TCTTAGCATGTAGTGTGTCT+AGG + Chr3:69159505-69159524 MsG0380015370.01.T01:three_prime_UTR 40.0%
TCTTGTAATGACACGCAGTA+TGG + Chr3:69156850-69156869 MsG0380015370.01.T01:intron 40.0%
TGGAAATTCCGCCTTAATTG+CGG + Chr3:69157762-69157781 MsG0380015370.01.T01:intron 40.0%
TGGAATGGTGAAACTGAATG+AGG - Chr3:69155420-69155439 None:intergenic 40.0%
TTAATCAATGTGGCAAAGGG+TGG + Chr3:69156351-69156370 MsG0380015370.01.T01:intron 40.0%
TTACGATTGCTATGCTACCT+GGG + Chr3:69157450-69157469 MsG0380015370.01.T01:intron 40.0%
TTGTGAACACTTCCTCTTGT+AGG + Chr3:69158472-69158491 MsG0380015370.01.T01:intron 40.0%
TTGTTATGGAAGAGACTACC+GGG + Chr3:69158843-69158862 MsG0380015370.01.T01:CDS 40.0%
TTTGCAGATAGAGGCTCTTA+AGG + Chr3:69158320-69158339 MsG0380015370.01.T01:intron 40.0%
! ACTTTTACAATGTGCAGGGA+AGG - Chr3:69159608-69159627 None:intergenic 40.0%
! AGAGTACTATCTATCCGATG+TGG - Chr3:69157883-69157902 None:intergenic 40.0%
! CATTAGAGTGCCAAGTAACT+AGG - Chr3:69156427-69156446 None:intergenic 40.0%
! CTGACTGACTCATGATATCA+GGG - Chr3:69157525-69157544 None:intergenic 40.0%
! GCAGAAGGTTGATCCATTAT+TGG - Chr3:69156705-69156724 None:intergenic 40.0%
! TCAAGTTGCACTGTAATGAG+AGG + Chr3:69159262-69159281 MsG0380015370.01.T01:CDS 40.0%
! TCTGACTGACTCATGATATC+AGG - Chr3:69157526-69157545 None:intergenic 40.0%
! TGTTTTACATCTGCTTGTGC+AGG + Chr3:69158793-69158812 MsG0380015370.01.T01:intron 40.0%
! TTCTTGACTCGTTCGAGTTA+GGG + Chr3:69155487-69155506 MsG0380015370.01.T01:five_prime_UTR 40.0%
!! ATGAAGGCATTGATTCTGGT+TGG + Chr3:69157298-69157317 MsG0380015370.01.T01:CDS 40.0%
!! CACAATGAAGGCATTGATTC+TGG + Chr3:69157294-69157313 MsG0380015370.01.T01:exon 40.0%
!! TCATTGTGTTGGCTTTGAGA+GGG + Chr3:69157846-69157865 MsG0380015370.01.T01:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+AGG + Chr3:69157845-69157864 MsG0380015370.01.T01:intron 40.0%
!! TTCGCACTTTTTGAGGAAAG+GGG - Chr3:69158087-69158106 None:intergenic 40.0%
!!! ACCCGGAGATTAGTTTTTCT+CGG + Chr3:69156078-69156097 MsG0380015370.01.T01:intron 40.0%
!!! GGGTTGGATTAGCTTAGTTT+TGG + Chr3:69156553-69156572 MsG0380015370.01.T01:intron 40.0%
!!! GTTTTGAAGCAGACCAAGAA+AGG - Chr3:69157242-69157261 None:intergenic 40.0%
AGTGTACAGAGGATGTGACA+CGG - Chr3:69157071-69157090 None:intergenic 45.0%
CAAACAAGGATCATGGTACG+TGG - Chr3:69156676-69156695 None:intergenic 45.0%
CAACCAACGTAGAATCTTGC+TGG + Chr3:69157666-69157685 MsG0380015370.01.T01:intron 45.0%
CAAGAAGACGAGTTAGAGTG+AGG - Chr3:69155473-69155492 None:intergenic 45.0%
CAGCCAAGGGACTATATAAC+AGG + Chr3:69159064-69159083 MsG0380015370.01.T01:CDS 45.0%
CATCTACTCACAGACAGCAA+AGG - Chr3:69158201-69158220 None:intergenic 45.0%
CCAAAACTGAGGGGTTCAAT+AGG - Chr3:69158934-69158953 None:intergenic 45.0%
CCATGATTCTGCATCAGGTA+AGG + Chr3:69157392-69157411 MsG0380015370.01.T01:intron 45.0%
CCTTACCTGATGCAGAATCA+TGG - Chr3:69157395-69157414 None:intergenic 45.0%
CTACCTGGGTAAATCAGAGA+TGG + Chr3:69157464-69157483 MsG0380015370.01.T01:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + Chr3:69157835-69157854 MsG0380015370.01.T01:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - Chr3:69157814-69157833 None:intergenic 45.0%
CTTACGATTGCTATGCTACC+TGG + Chr3:69157449-69157468 MsG0380015370.01.T01:intron 45.0%
CTTCTCCTCCATGAGATTTG+TGG - Chr3:69158694-69158713 None:intergenic 45.0%
GAGTGCCAAGTAACTAGGTT+TGG - Chr3:69156422-69156441 None:intergenic 45.0%
GATCGAACTCAACCCCATTA+GGG - Chr3:69155892-69155911 None:intergenic 45.0%
GCACTGTAATGAGAGGAGTT+CGG + Chr3:69159269-69159288 MsG0380015370.01.T01:CDS 45.0%
GCCAGAGATAAGCTGATTGA+TGG + Chr3:69158596-69158615 MsG0380015370.01.T01:CDS 45.0%
GCCATCAATCAGCTTATCTC+TGG - Chr3:69158600-69158619 None:intergenic 45.0%
GCTGGATTCTGTCAAAACTC+TGG + Chr3:69157684-69157703 MsG0380015370.01.T01:intron 45.0%
GCTTCAGCTATACCCTAATG+GGG + Chr3:69155877-69155896 MsG0380015370.01.T01:intron 45.0%
GGACATTGGAGTTACTGAAG+TGG + Chr3:69158341-69158360 MsG0380015370.01.T01:CDS 45.0%
GGCATTCAACTGTTGGTCAA+TGG + Chr3:69159332-69159351 MsG0380015370.01.T01:CDS 45.0%
GGCTATCAATTACCAACCAG+AGG + Chr3:69158368-69158387 MsG0380015370.01.T01:CDS 45.0%
GTGCATGAGACAGCCAAAAT+TGG + Chr3:69159169-69159188 MsG0380015370.01.T01:CDS 45.0%
GTTGACGAGCCATCGAAATA+TGG + Chr3:69158815-69158834 MsG0380015370.01.T01:CDS 45.0%
TAGCATGTAGTGTGTCTAGG+AGG + Chr3:69159508-69159527 MsG0380015370.01.T01:three_prime_UTR 45.0%
TAGCCTCACATGACTATCTC+TGG - Chr3:69159472-69159491 None:intergenic 45.0%
TGACACGGTTAGGAAAAGAG+AGG - Chr3:69158405-69158424 None:intergenic 45.0%
TGAGAATGACTGACACGGTT+AGG - Chr3:69158415-69158434 None:intergenic 45.0%
TGATCGAACTCAACCCCATT+AGG - Chr3:69155893-69155912 None:intergenic 45.0%
TGCATATCCAGCAGCATCAT+CGG + Chr3:69159307-69159326 MsG0380015370.01.T01:CDS 45.0%
TGCGTCTACTAACATTGCCA+TGG - Chr3:69156239-69156258 None:intergenic 45.0%
TGGAGGAGAAGCTTCCATAA+TGG + Chr3:69158703-69158722 MsG0380015370.01.T01:CDS 45.0%
TGTTCTCTTCCAGCCTTTCT+TGG + Chr3:69157226-69157245 MsG0380015370.01.T01:intron 45.0%
TTACAATGTGCAGGGAAGGA+AGG - Chr3:69159604-69159623 None:intergenic 45.0%
TTATCTCTGGCAAGAGCCAA+GGG - Chr3:69158587-69158606 None:intergenic 45.0%
TTGCTGTCTGTGAGTAGATG+CGG + Chr3:69158201-69158220 MsG0380015370.01.T01:intron 45.0%
TTGTTCTTGCTTGCGTGAGA+AGG + Chr3:69158110-69158129 MsG0380015370.01.T01:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - Chr3:69157840-69157859 None:intergenic 45.0%
! AGTTTACAGCAATGGTGGTG+TGG + Chr3:69159408-69159427 MsG0380015370.01.T01:CDS 45.0%
! CCTATTGAACCCCTCAGTTT+TGG + Chr3:69158931-69158950 MsG0380015370.01.T01:CDS 45.0%
! CGATCACAGTGGTTAGTTAG+TGG + Chr3:69155907-69155926 MsG0380015370.01.T01:intron 45.0%
! CTATATGCAATGGTTCTGCC+TGG + Chr3:69159022-69159041 MsG0380015370.01.T01:CDS 45.0%
! CTTCTTGACTCGTTCGAGTT+AGG + Chr3:69155486-69155505 MsG0380015370.01.T01:five_prime_UTR 45.0%
! GATAAGCTGATTGATGGCTC+TGG + Chr3:69158602-69158621 MsG0380015370.01.T01:CDS 45.0%
! TACGTTGGTTGTTGCCTTGT+TGG - Chr3:69157657-69157676 None:intergenic 45.0%
! TTGATTCTGGTTGGAGGGTT+TGG + Chr3:69157307-69157326 MsG0380015370.01.T01:CDS 45.0%
!! AAGGCATTGATTCTGGTTGG+AGG + Chr3:69157301-69157320 MsG0380015370.01.T01:CDS 45.0%
!! AGGCATTGATTCTGGTTGGA+GGG + Chr3:69157302-69157321 MsG0380015370.01.T01:CDS 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - Chr3:69157837-69157856 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - Chr3:69157939-69157958 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + Chr3:69157936-69157955 MsG0380015370.01.T01:intron 45.0%
!! GATGTGACCTTTGCTTTTCC+AGG - Chr3:69157275-69157294 None:intergenic 45.0%
!! TCGCACTTTTTGAGGAAAGG+GGG - Chr3:69158086-69158105 None:intergenic 45.0%
!!! CGGAGATTAGTTTTTCTCGG+TGG + Chr3:69156081-69156100 MsG0380015370.01.T01:intron 45.0%
ACCATAACAGAGGTCGAGCT+AGG - Chr3:69156267-69156286 None:intergenic 50.0%
AGGTCGCAATTTAGGCGACT+AGG - Chr3:69157794-69157813 None:intergenic 50.0%
ATCGGGTGGCATTCAACTGT+TGG + Chr3:69159325-69159344 MsG0380015370.01.T01:CDS 50.0%
ATTGGCGAGGGATGTCTCAT+TGG + Chr3:69159187-69159206 MsG0380015370.01.T01:CDS 50.0%
CAAGCCCATGATTCTGCATC+AGG + Chr3:69157387-69157406 MsG0380015370.01.T01:CDS 50.0%
CACAGACAGCAAAGGGATGA+TGG - Chr3:69158193-69158212 None:intergenic 50.0%
CCAATGTCCATCCAGAATCC+AGG - Chr3:69159043-69159062 None:intergenic 50.0%
CCAGGACCAATTGCAACATC+AGG - Chr3:69159214-69159233 None:intergenic 50.0%
CCTGATGTTGCAATTGGTCC+TGG + Chr3:69159211-69159230 MsG0380015370.01.T01:CDS 50.0%
CCTGGATTCTGGATGGACAT+TGG + Chr3:69159040-69159059 MsG0380015370.01.T01:CDS 50.0%
CGCCAAACCCTCAATTCTTC+AGG + Chr3:69155522-69155541 MsG0380015370.01.T01:five_prime_UTR 50.0%
CTCTGTACACTTGTCAGCTC+AGG + Chr3:69157080-69157099 MsG0380015370.01.T01:intron 50.0%
CTGAGCTGACAAGTGTACAG+AGG - Chr3:69157082-69157101 None:intergenic 50.0%
CTTATCTCTGGCAAGAGCCA+AGG - Chr3:69158588-69158607 None:intergenic 50.0%
GAGACAGCCAAAATTGGCGA+GGG + Chr3:69159175-69159194 MsG0380015370.01.T01:CDS 50.0%
GATGGACATTGGACAGCCAA+GGG + Chr3:69159051-69159070 MsG0380015370.01.T01:CDS 50.0%
GCACAATCCATACCTCTGGT+TGG - Chr3:69158383-69158402 None:intergenic 50.0%
GCATATCCAGCAGCATCATC+GGG + Chr3:69159308-69159327 MsG0380015370.01.T01:CDS 50.0%
GCCACTACTCCATTCAAACC+CGG + Chr3:69156013-69156032 MsG0380015370.01.T01:intron 50.0%
GGTCGCAATTTAGGCGACTA+GGG - Chr3:69157793-69157812 None:intergenic 50.0%
GTCGCAATTTAGGCGACTAG+GGG - Chr3:69157792-69157811 None:intergenic 50.0%
GTCGCCTAAATTGCGACCTT+TGG + Chr3:69157795-69157814 MsG0380015370.01.T01:intron 50.0%
TCCGGGTTTGAATGGAGTAG+TGG - Chr3:69156017-69156036 None:intergenic 50.0%
TCCTAGCTCGACCTCTGTTA+TGG + Chr3:69156263-69156282 MsG0380015370.01.T01:intron 50.0%
TCTTCTTCCTGAGTGAGTCC+AGG - Chr3:69159102-69159121 None:intergenic 50.0%
TGAAGCAGACCAAGAAAGGC+TGG - Chr3:69157238-69157257 None:intergenic 50.0%
TGACAAGCAGAAGCTGAGTG+CGG + Chr3:69156531-69156550 MsG0380015370.01.T01:intron 50.0%
TGAGACAGCCAAAATTGGCG+AGG + Chr3:69159174-69159193 MsG0380015370.01.T01:CDS 50.0%
TGCTGTCTGTGAGTAGATGC+GGG + Chr3:69158202-69158221 MsG0380015370.01.T01:intron 50.0%
TGGAGTTACTGAAGTGGTGC+TGG + Chr3:69158347-69158366 MsG0380015370.01.T01:CDS 50.0%
TTGGGAACGCTGAGTGTCAA+TGG - Chr3:69157346-69157365 None:intergenic 50.0%
! AACAGGTCTGAGACTCTACC+TGG + Chr3:69159081-69159100 MsG0380015370.01.T01:CDS 50.0%
! ACTTCTTCCAAGTTGGCCAG+TGG + Chr3:69159121-69159140 MsG0380015370.01.T01:CDS 50.0%
! AGAGGCACAATCCATACCTC+TGG - Chr3:69158387-69158406 None:intergenic 50.0%
! AGTTTTTCTCGGTGGCGTGT+GGG + Chr3:69156089-69156108 MsG0380015370.01.T01:intron 50.0%
! CAATGGTTCTGCCTGGATTC+TGG + Chr3:69159029-69159048 MsG0380015370.01.T01:CDS 50.0%
! GAGACATCCCTCGCCAATTT+TGG - Chr3:69159185-69159204 None:intergenic 50.0%
! GAGGGTTTGGAACAAGGTTG+AGG + Chr3:69157320-69157339 MsG0380015370.01.T01:CDS 50.0%
! TAGTTTTTCTCGGTGGCGTG+TGG + Chr3:69156088-69156107 MsG0380015370.01.T01:intron 50.0%
! TGGTTGGAGGGTTTGGAACA+AGG + Chr3:69157314-69157333 MsG0380015370.01.T01:CDS 50.0%
!! ACTCGATCGGTGCCACTAAA+AGG - Chr3:69159796-69159815 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - Chr3:69157934-69157953 None:intergenic 50.0%
!! TGTGTTGGCTTTGAGAGGGT+GGG + Chr3:69157850-69157869 MsG0380015370.01.T01:intron 50.0%
!! TTGTGTTGGCTTTGAGAGGG+TGG + Chr3:69157849-69157868 MsG0380015370.01.T01:intron 50.0%
ACAAGCAGAAGCTGAGTGCG+GGG + Chr3:69156533-69156552 MsG0380015370.01.T01:intron 55.0%
ACTGAACCATTGGGGACTGC+AGG + Chr3:69158560-69158579 MsG0380015370.01.T01:CDS 55.0%
CTAGGGGCAGACCGCAATTA+AGG - Chr3:69157776-69157795 None:intergenic 55.0%
GACAAGCAGAAGCTGAGTGC+GGG + Chr3:69156532-69156551 MsG0380015370.01.T01:intron 55.0%
GACTCTACCTGGACTCACTC+AGG + Chr3:69159092-69159111 MsG0380015370.01.T01:CDS 55.0%
GCACTCCTCACCTTACAAGC+CGG + Chr3:69157926-69157945 MsG0380015370.01.T01:intron 55.0%
GGATGGACATTGGACAGCCA+AGG + Chr3:69159050-69159069 MsG0380015370.01.T01:CDS 55.0%
GGCGTGTGACCATTCAAACC+CGG + Chr3:69156061-69156080 MsG0380015370.01.T01:intron 55.0%
GGGGTTGAGTTCGATCACAG+TGG + Chr3:69155896-69155915 MsG0380015370.01.T01:intron 55.0%
GGTTCTGCCTGGATTCTGGA+TGG + Chr3:69159033-69159052 MsG0380015370.01.T01:CDS 55.0%
TATCCAGCAGCATCATCGGG+TGG + Chr3:69159311-69159330 MsG0380015370.01.T01:CDS 55.0%
TATGGAAGAGACTACCGGGC+AGG + Chr3:69158847-69158866 MsG0380015370.01.T01:CDS 55.0%
! CCAGTGGCCCTCACATTTTG+GGG + Chr3:69159137-69159156 MsG0380015370.01.T01:CDS 55.0%
! GCCAGTGGCCCTCACATTTT+GGG + Chr3:69159136-69159155 MsG0380015370.01.T01:CDS 55.0%
! GGGTGGGTTTAGTCCCACAT+CGG + Chr3:69157866-69157885 MsG0380015370.01.T01:intron 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - Chr3:69157825-69157844 None:intergenic 55.0%
!! TGGTGTGGTTTTGCCCCACA+AGG + Chr3:69159423-69159442 MsG0380015370.01.T01:CDS 55.0%
!! TTAGTGGCACCGATCGAGTG+TGG + Chr3:69159797-69159816 MsG0380015370.01.T01:three_prime_UTR 55.0%
AAGGGACCTGCAGTCCCCAA+TGG - Chr3:69158569-69158588 None:intergenic 60.0%
ATGCCACCCGATGATGCTGC+TGG - Chr3:69159317-69159336 None:intergenic 60.0%
ATTGGGGACTGCAGGTCCCT+TGG + Chr3:69158568-69158587 MsG0380015370.01.T01:CDS 60.0%
CCCCAAAATGTGAGGGCCAC+TGG - Chr3:69159140-69159159 None:intergenic 60.0%
GGGGCAGACCGCAATTAAGG+CGG - Chr3:69157773-69157792 None:intergenic 60.0%
GTGGCAAAGGGTGGCCTGTT+TGG + Chr3:69156360-69156379 MsG0380015370.01.T01:intron 60.0%
! GGCCAGTGGCCCTCACATTT+TGG + Chr3:69159135-69159154 MsG0380015370.01.T01:CDS 60.0%
! TGTTGGTCAATGGGCTCGCG+TGG + Chr3:69159342-69159361 MsG0380015370.01.T01:CDS 60.0%
GCAGAAGCTGAGTGCGGGGT+TGG + Chr3:69156537-69156556 MsG0380015370.01.T01:intron 65.0%
GTGAGGGCCACTGGCCAACT+TGG - Chr3:69159131-69159150 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 69155250 69159817 69155250 ID=MsG0380015370.01;Name=MsG0380015370.01
Chr3 mRNA 69155250 69159817 69155250 ID=MsG0380015370.01.T01;Parent=MsG0380015370.01;Name=MsG0380015370.01.T01;_AED=0.32;_eAED=0.32;_QI=353|1|1|1|0.75|0.6|5|331|361
Chr3 exon 69155250 69155543 69155250 ID=MsG0380015370.01.T01:exon:228;Parent=MsG0380015370.01.T01
Chr3 exon 69157239 69157408 69157239 ID=MsG0380015370.01.T01:exon:229;Parent=MsG0380015370.01.T01
Chr3 five_prime_UTR 69155250 69155543 69155250 ID=MsG0380015370.01.T01:five_prime_utr;Parent=MsG0380015370.01.T01
Chr3 five_prime_UTR 69157239 69157297 69157239 ID=MsG0380015370.01.T01:five_prime_utr;Parent=MsG0380015370.01.T01
Chr3 CDS 69157298 69157408 69157298 ID=MsG0380015370.01.T01:cds;Parent=MsG0380015370.01.T01
Chr3 CDS 69158327 69158389 69158327 ID=MsG0380015370.01.T01:cds;Parent=MsG0380015370.01.T01
Chr3 CDS 69158494 69158733 69158494 ID=MsG0380015370.01.T01:cds;Parent=MsG0380015370.01.T01
Chr3 CDS 69158815 69159486 69158815 ID=MsG0380015370.01.T01:cds;Parent=MsG0380015370.01.T01
Chr3 three_prime_UTR 69159487 69159817 69159487 ID=MsG0380015370.01.T01:three_prime_utr;Parent=MsG0380015370.01.T01
Chr3 mRNA 69157183 69159817 69157183 ID=MsG0380015370.01.T02;Parent=MsG0380015370.01;Name=MsG0380015370.01.T02;_AED=0.35;_eAED=0.35;_QI=115|1|1|1|1|1|4|331|361
Chr3 exon 69157183 69157408 69157183 ID=MsG0380015370.01.T02:exon:233;Parent=MsG0380015370.01.T02
Chr3 five_prime_UTR 69157183 69157297 69157183 ID=MsG0380015370.01.T02:five_prime_utr;Parent=MsG0380015370.01.T02
Chr3 CDS 69157298 69157408 69157298 ID=MsG0380015370.01.T02:cds;Parent=MsG0380015370.01.T02
Chr3 CDS 69158327 69158389 69158327 ID=MsG0380015370.01.T02:cds;Parent=MsG0380015370.01.T02
Chr3 CDS 69158494 69158733 69158494 ID=MsG0380015370.01.T02:cds;Parent=MsG0380015370.01.T02
Chr3 CDS 69158815 69159486 69158815 ID=MsG0380015370.01.T02:cds;Parent=MsG0380015370.01.T02
Chr3 three_prime_UTR 69159487 69159817 69159487 ID=MsG0380015370.01.T02:three_prime_utr;Parent=MsG0380015370.01.T02
Gene Sequence

>MsG0380015370.01.T01

ATGAAGGCATTGATTCTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGCGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTTAAGGACATTGGAGTTACTGAAGTGGTGCTGGCTATCAATTACCAACCAGAGGTGATGTTGAATTTCTTGAAGGACTTTGAGGAAAAGCTCGACATCAAAATCACTTGCTCTCAAGAAACTGAACCATTGGGGACTGCAGGTCCCTTGGCTCTTGCCAGAGATAAGCTGATTGATGGCTCTGGTGAGCCATTTTTTGTTCTCAACAGCGATGTTATCAGTGAGTATCCACTCAAAGAAATGATAGAATTCCACAAATCTCATGGAGGAGAAGCTTCCATAATGGTGACAAAGGTTGACGAGCCATCGAAATATGGTGTAGTTGTTATGGAAGAGACTACCGGGCAGGTTGAGAAATTTGTTGAGAAACCCAAGTTGTTTGTTGGCAACAAAATCAATGCTGGGATCTACCTATTGAACCCCTCAGTTTTGGATCATATTGAACTGAGACCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATTGCAGCAAACAAAAAGCTATATGCAATGGTTCTGCCTGGATTCTGGATGGACATTGGACAGCCAAGGGACTATATAACAGGTCTGAGACTCTACCTGGACTCACTCAGGAAGAAGACTTCTTCCAAGTTGGCCAGTGGCCCTCACATTTTGGGGAATGTGATTGTGCATGAGACAGCCAAAATTGGCGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGTACTATTGAGTCAGGTGTCAGGCTTTCAAGTTGCACTGTAATGAGAGGAGTTCGGATTAAGAAGCATGCTTGCATATCCAGCAGCATCATCGGGTGGCATTCAACTGTTGGTCAATGGGCTCGCGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTATCTGATGAAGTTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAAATCAAAACAAGCATTCTGAATCCAGAGATAGTCATGTGA

>MsG0380015370.01.T02

ATGAAGGCATTGATTCTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGCGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTTAAGGACATTGGAGTTACTGAAGTGGTGCTGGCTATCAATTACCAACCAGAGGTGATGTTGAATTTCTTGAAGGACTTTGAGGAAAAGCTCGACATCAAAATCACTTGCTCTCAAGAAACTGAACCATTGGGGACTGCAGGTCCCTTGGCTCTTGCCAGAGATAAGCTGATTGATGGCTCTGGTGAGCCATTTTTTGTTCTCAACAGCGATGTTATCAGTGAGTATCCACTCAAAGAAATGATAGAATTCCACAAATCTCATGGAGGAGAAGCTTCCATAATGGTGACAAAGGTTGACGAGCCATCGAAATATGGTGTAGTTGTTATGGAAGAGACTACCGGGCAGGTTGAGAAATTTGTTGAGAAACCCAAGTTGTTTGTTGGCAACAAAATCAATGCTGGGATCTACCTATTGAACCCCTCAGTTTTGGATCATATTGAACTGAGACCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATTGCAGCAAACAAAAAGCTATATGCAATGGTTCTGCCTGGATTCTGGATGGACATTGGACAGCCAAGGGACTATATAACAGGTCTGAGACTCTACCTGGACTCACTCAGGAAGAAGACTTCTTCCAAGTTGGCCAGTGGCCCTCACATTTTGGGGAATGTGATTGTGCATGAGACAGCCAAAATTGGCGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGTACTATTGAGTCAGGTGTCAGGCTTTCAAGTTGCACTGTAATGAGAGGAGTTCGGATTAAGAAGCATGCTTGCATATCCAGCAGCATCATCGGGTGGCATTCAACTGTTGGTCAATGGGCTCGCGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTATCTGATGAAGTTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAAATCAAAACAAGCATTCTGAATCCAGAGATAGTCATGTGA
Protein sequence

>MsG0380015370.01.T01

MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVMLNFLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDHIELRPTSIEKEVFPKIAANKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKTSSKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSSCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM*

>MsG0380015370.01.T02

MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVMLNFLKDFEEKLDIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLKEMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDHIELRPTSIEKEVFPKIAANKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKTSSKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCTIESGVRLSSCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVSDEVYSNGGVVLPHKEIKTSILNPEIVM*