AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017100.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017100.01.T01 MTR_3g100910 78.522 582 22 8 1 519 1 542 0.0 873
MsG0380017100.01.T01 MTR_7g110660 33.591 518 237 12 69 519 52 529 9.09e-93 293
MsG0380017100.01.T01 MTR_7g110660 33.591 518 237 12 69 519 139 616 2.54e-92 294
MsG0380017100.01.T01 MTR_3g114570 33.268 511 258 13 64 519 6 488 3.32e-82 264
MsG0380017100.01.T01 MTR_3g048190 30.185 540 266 13 51 519 2 501 1.36e-68 229
MsG0380017100.01.T01 MTR_3g048190 30.402 523 257 12 64 519 12 494 2.62e-68 228
MsG0380017100.01.T01 MTR_3g114550 37.805 246 94 5 139 383 17 204 7.93e-47 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017100.01.T01 AT5G52520 64.433 582 99 11 3 519 5 543 0.0 681
MsG0380017100.01.T01 AT3G62120 33.462 517 238 12 69 519 41 517 3.46e-87 278
MsG0380017100.01.T01 AT3G62120 33.462 517 238 12 69 519 54 530 5.68e-87 278
MsG0380017100.01.T01 AT3G62120 33.462 517 238 12 69 519 54 530 5.68e-87 278
MsG0380017100.01.T01 AT5G10880 31.390 223 95 8 354 519 88 309 5.81e-18 85.1

Find 30 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCTCTGCTGCAGTGGTTT+TGG 0.267968 3:+91939534 None:intergenic
AATGCCGAATTAGCCGATTA+TGG 0.271261 3:-91939415 MsG0380017099.01.T01:five_prime_UTR
TGAGTTGTCGACTCGGTCTT+TGG 0.312270 3:+91939513 None:intergenic
CGGCGGTGGCGGAGAATGAT+TGG 0.327896 3:+91939586 None:intergenic
AGGCCCATAATCGGCTAATT+CGG 0.375577 3:+91939411 None:intergenic
GGCGGTGGCGGAGAATGATT+GGG 0.387864 3:+91939587 None:intergenic
ATGCCGAATTAGCCGATTAT+GGG 0.433240 3:-91939414 MsG0380017099.01.T01:five_prime_UTR
GCCGATTATGGGCCTGTTCG+CGG 0.441981 3:-91939403 MsG0380017099.01.T01:five_prime_UTR
TGAAAGGTTGGTGACGGCGG+TGG 0.445524 3:+91939572 None:intergenic
AATACCATTGTACCGCGAAC+AGG 0.453409 3:+91939391 None:intergenic
ACCGCGAACAGGCCCATAAT+CGG 0.474067 3:+91939402 None:intergenic
AAGGTTGGTGACGGCGGTGG+CGG 0.488368 3:+91939575 None:intergenic
CTAGGCGTGATGACTCGGTC+GGG 0.491484 3:+91939478 None:intergenic
GCAGAGAAGGTGGCGGTGAA+AGG 0.522135 3:+91939556 None:intergenic
AGAAGGTGGCGGTGAAAGGT+TGG 0.528336 3:+91939560 None:intergenic
GCATTGAAGTCTTGTGACCT+AGG 0.535218 3:+91939460 None:intergenic
GTCTTTGGTCTCTGCTGCAG+TGG 0.539852 3:+91939528 None:intergenic
GTGACCTAGGCGTGATGACT+CGG 0.541090 3:+91939473 None:intergenic
CGGTGAAAGGTTGGTGACGG+CGG 0.571786 3:+91939569 None:intergenic
TAGGCGTGATGACTCGGTCG+GGG 0.576073 3:+91939479 None:intergenic
ATAATCGGCTAATTCGGCAT+TGG 0.579114 3:+91939417 None:intergenic
TGGGCCTGTTCGCGGTACAA+TGG 0.602169 3:-91939395 MsG0380017099.01.T01:intron
GATTCTTTGAGTTGTCGACT+CGG 0.605478 3:+91939506 None:intergenic
CCTAGGCGTGATGACTCGGT+CGG 0.612301 3:+91939477 None:intergenic
CTTGAGAGACACCATTTGTG+TGG 0.613060 3:+91939669 None:intergenic
TGGCGGTGAAAGGTTGGTGA+CGG 0.625593 3:+91939566 None:intergenic
GGCGGAGAATGATTGGGGAA+CGG 0.627567 3:+91939593 None:intergenic
CCGACCGAGTCATCACGCCT+AGG 0.658930 3:-91939477 MsG0380017099.01.T01:five_prime_UTR
GCGGTGGCGGAGAATGATTG+GGG 0.684633 3:+91939588 None:intergenic
GGTCACAAGACTTCAATGCG+TGG 0.719791 3:-91939456 MsG0380017099.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+TGG + Chr3:91933898-91933917 None:intergenic 0.0%
!! TTTCTAATAATATGATTTAT+GGG - Chr3:91939398-91939417 MsG0380017099.01.T01:exon 10.0%
!!! AAGCAAAATTTAAAATTTAA+AGG + Chr3:91934665-91934684 None:intergenic 10.0%
!! AATAGAGATATAATATATGA+TGG - Chr3:91937438-91937457 MsG0380017099.01.T01:CDS 15.0%
!! ATCAAAAATTAAAGTAAAAC+AGG + Chr3:91934056-91934075 None:intergenic 15.0%
!! CTTTCTAATAATATGATTTA+TGG - Chr3:91939397-91939416 MsG0380017099.01.T01:exon 15.0%
!! TAAATTTGTATCAAAACAAT+TGG + Chr3:91939661-91939680 None:intergenic 15.0%
!! TCATAAGTTTCAATTTAAAT+TGG + Chr3:91936501-91936520 None:intergenic 15.0%
!! TTAATCTTTACCAAATTATA+AGG - Chr3:91937896-91937915 MsG0380017099.01.T01:intron 15.0%
!! TTGTATATTAGTAGAAAATA+TGG + Chr3:91936301-91936320 None:intergenic 15.0%
!!! ATTATCCATTTTCTTTTATA+GGG - Chr3:91936742-91936761 MsG0380017100.01.T01:intron 15.0%
!!! GTATAATTTTATGACTAATT+TGG + Chr3:91936215-91936234 None:intergenic 15.0%
!!! GTGTTATTAAATCAATTATA+TGG - Chr3:91934080-91934099 MsG0380017100.01.T01:intron 15.0%
!!! TATTATCCATTTTCTTTTAT+AGG - Chr3:91936741-91936760 MsG0380017100.01.T01:intron 15.0%
!!! TTATCTTTTAGAATCATATA+TGG - Chr3:91935833-91935852 MsG0380017100.01.T01:intron 15.0%
!!! TTTTAAAAATCAATAACAGT+TGG + Chr3:91936776-91936795 None:intergenic 15.0%
!! AAAAGTTGAGTTATATGATA+TGG + Chr3:91936602-91936621 None:intergenic 20.0%
!! AAATATGGTCAAAATAAGTT+AGG + Chr3:91936286-91936305 None:intergenic 20.0%
!! AAATGAAGCAAAAAATAAAC+AGG + Chr3:91933867-91933886 None:intergenic 20.0%
!! AGAAAAACAGTCATAAAAAA+AGG + Chr3:91935035-91935054 None:intergenic 20.0%
!! ATAAATGAATAAAACAGAAG+TGG + Chr3:91936715-91936734 None:intergenic 20.0%
!! CAACATAATCTTAAGTAAAA+AGG + Chr3:91934601-91934620 None:intergenic 20.0%
!! TAAATGAATAAAACAGAAGT+GGG + Chr3:91936714-91936733 None:intergenic 20.0%
!! TAATAATATGATTTATGGGT+GGG - Chr3:91939402-91939421 MsG0380017099.01.T01:five_prime_UTR 20.0%
!! TATATTCAGATAGTCAAATA+TGG + Chr3:91938375-91938394 None:intergenic 20.0%
!! TGAGAATCTTATAAAATGAA+AGG + Chr3:91937949-91937968 None:intergenic 20.0%
!! TTATAAGATTCTCATTTGAA+GGG - Chr3:91937955-91937974 MsG0380017099.01.T01:CDS 20.0%
!! TTTATAAGATTCTCATTTGA+AGG - Chr3:91937954-91937973 MsG0380017099.01.T01:CDS 20.0%
!! TTTATCTTGTGTTAAAGAAA+TGG + Chr3:91934164-91934183 None:intergenic 20.0%
!!! AATATGAGATTTTTTTTCAC+CGG - Chr3:91936014-91936033 MsG0380017100.01.T01:intron 20.0%
!!! ATTTTTTTCTTCCAATTTCA+GGG - Chr3:91938403-91938422 MsG0380017099.01.T01:intron 20.0%
!!! GGTAATGAAATTTTATGTTA+TGG + Chr3:91934847-91934866 None:intergenic 20.0%
!!! TATTTTTTTCTTCCAATTTC+AGG - Chr3:91938402-91938421 MsG0380017099.01.T01:intron 20.0%
!!! TGTTTTTCTTCACATATTAT+CGG - Chr3:91935046-91935065 MsG0380017100.01.T01:CDS 20.0%
!!! TTATTTAGTTTTGTTTGTGT+AGG - Chr3:91933911-91933930 MsG0380017100.01.T01:CDS 20.0%
!!! TTTAAATTTTGCTTGTACTT+GGG - Chr3:91934671-91934690 MsG0380017100.01.T01:CDS 20.0%
!!! TTTTAAATTTTGCTTGTACT+TGG - Chr3:91934670-91934689 MsG0380017100.01.T01:CDS 20.0%
! AAAATCAAAGACAAAACCTT+AGG + Chr3:91935137-91935156 None:intergenic 25.0%
! AAACTTCTACATCCAAATAT+AGG - Chr3:91938019-91938038 MsG0380017099.01.T01:intron 25.0%
! AAATAAGTTGTTATCCAAAC+AGG + Chr3:91934106-91934125 None:intergenic 25.0%
! AAATGAATAAAACAGAAGTG+GGG + Chr3:91936713-91936732 None:intergenic 25.0%
! AACTTCAGTTAGAGTATATT+CGG - Chr3:91937817-91937836 MsG0380017099.01.T01:intron 25.0%
! AAGAAAAAAAAATACTCCAC+AGG + Chr3:91935809-91935828 None:intergenic 25.0%
! AAGACTAGAATATATCATTC+AGG + Chr3:91938725-91938744 None:intergenic 25.0%
! AATTCCAATCTCTATTAGAA+AGG - Chr3:91938876-91938895 MsG0380017099.01.T01:intron 25.0%
! ATTTAGTGTATTACATAGAG+TGG + Chr3:91938814-91938833 None:intergenic 25.0%
! ATTTCCTTTCTAATAGAGAT+TGG + Chr3:91938883-91938902 None:intergenic 25.0%
! CATGTAAACTATCCTATATT+TGG + Chr3:91938034-91938053 None:intergenic 25.0%
! CTAATAATATGATTTATGGG+TGG - Chr3:91939401-91939420 MsG0380017099.01.T01:five_prime_UTR 25.0%
! CTATTAGAAAGGAAATCAAT+TGG - Chr3:91938887-91938906 MsG0380017099.01.T01:intron 25.0%
! TATATTTGGATGTAGAAGTT+TGG + Chr3:91938020-91938039 None:intergenic 25.0%
! TCATAGCATTCCTTATAATT+TGG + Chr3:91937909-91937928 None:intergenic 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - Chr3:91936420-91936439 MsG0380017100.01.T01:intron 25.0%
! TTACATGCAAAATGATTTCA+TGG + Chr3:91937707-91937726 None:intergenic 25.0%
! TTAGAACTCTTGAATTTCTT+TGG - Chr3:91935406-91935425 MsG0380017100.01.T01:intron 25.0%
! TTATTTGAATGTCAAGTTCA+AGG - Chr3:91933935-91933954 MsG0380017100.01.T01:CDS 25.0%
! TTTCATACATAACATCCAAT+AGG - Chr3:91937560-91937579 MsG0380017099.01.T01:CDS 25.0%
! TTTGTAGTGTAAGAATATGA+GGG - Chr3:91934779-91934798 MsG0380017100.01.T01:intron 25.0%
!! AATTCAAGAGTTCTAACAAA+TGG + Chr3:91935402-91935421 None:intergenic 25.0%
!! ACTTGGATAGATTTCATTTT+TGG - Chr3:91938305-91938324 MsG0380017099.01.T01:intron 25.0%
!! ATTAAAAGATGTTTGATGAC+AGG - Chr3:91939304-91939323 MsG0380017099.01.T01:intron 25.0%
!! ATTATTTCTTGTTACCACTT+AGG - Chr3:91939465-91939484 MsG0380017099.01.T01:five_prime_UTR 25.0%
!! ATTGAGATCATTTTGAATTG+AGG + Chr3:91937591-91937610 None:intergenic 25.0%
!! ATTTCTCTTGTAGTTTTTCT+AGG + Chr3:91937387-91937406 None:intergenic 25.0%
!! CTAGTTAAATACTTTTCAGA+AGG - Chr3:91938757-91938776 MsG0380017099.01.T01:intron 25.0%
!! GTTTTTCTTCACATATTATC+GGG - Chr3:91935047-91935066 MsG0380017100.01.T01:intron 25.0%
!! TAATATATGATGGAACATTG+AGG - Chr3:91937448-91937467 MsG0380017099.01.T01:CDS 25.0%
!! TTTTTACTGTGATAGACATT+TGG - Chr3:91938642-91938661 MsG0380017099.01.T01:intron 25.0%
!!! AAAGTGATATCTTGATAATG+TGG - Chr3:91934808-91934827 MsG0380017100.01.T01:intron 25.0%
!!! ACAGTAAAAAGTATCACAAA+AGG + Chr3:91938632-91938651 None:intergenic 25.0%
!!! ACTTATTTTGCAGCTTATAT+AGG - Chr3:91934118-91934137 MsG0380017100.01.T01:CDS 25.0%
!!! ATTTTTTCTTCTGTGAGTTA+TGG - Chr3:91935923-91935942 MsG0380017100.01.T01:intron 25.0%
!!! CTTCTGAAAAGTATTTAACT+AGG + Chr3:91938759-91938778 None:intergenic 25.0%
!!! CTTGGATAGATTTCATTTTT+GGG - Chr3:91938306-91938325 MsG0380017099.01.T01:intron 25.0%
!!! TCTTTGATTTTCCATTTTTG+AGG - Chr3:91935146-91935165 MsG0380017100.01.T01:intron 25.0%
AAACGTCGAAAAATTAAGCT+AGG + Chr3:91934381-91934400 None:intergenic 30.0%
AAGCTATCCTAGTGAATTTA+GGG - Chr3:91934212-91934231 MsG0380017100.01.T01:intron 30.0%
AATATCTGATCTGACACTAT+GGG + Chr3:91934358-91934377 None:intergenic 30.0%
AATCAATTATATGGCCTGTT+TGG - Chr3:91934089-91934108 MsG0380017100.01.T01:intron 30.0%
AATTGTACCAATTTGGAAGA+AGG - Chr3:91938137-91938156 MsG0380017099.01.T01:intron 30.0%
ACAACAATCCTTCCTAAAAT+AGG - Chr3:91936142-91936161 MsG0380017100.01.T01:intron 30.0%
ACAATAAAAAAAGGGTAACC+CGG + Chr3:91934513-91934532 None:intergenic 30.0%
ACTTAGGCAAAAGTTGTATA+AGG - Chr3:91939481-91939500 MsG0380017099.01.T01:five_prime_UTR 30.0%
AGAAATTGAATTTCATCCAG+GGG + Chr3:91938262-91938281 None:intergenic 30.0%
AGATGAGTTAAAAGTGAAAG+AGG - Chr3:91939234-91939253 MsG0380017099.01.T01:CDS 30.0%
AGTAAACATGTGATTCACAA+TGG + Chr3:91935200-91935219 None:intergenic 30.0%
ATATATTTGGCAGACATCAT+GGG - Chr3:91936879-91936898 MsG0380017100.01.T01:intron 30.0%
ATGATATGGCACAATCAATA+TGG + Chr3:91936588-91936607 None:intergenic 30.0%
CAGAAATTGAATTTCATCCA+GGG + Chr3:91938263-91938282 None:intergenic 30.0%
CAGAATCAATGTGTACAATT+TGG + Chr3:91938333-91938352 None:intergenic 30.0%
CATATTTCCCTAAATTCACT+AGG + Chr3:91934222-91934241 None:intergenic 30.0%
CATGTGTAGATATCTTTGTT+AGG - Chr3:91937020-91937039 MsG0380017100.01.T01:intron 30.0%
CTACAAACAGTACAAGATAT+AGG + Chr3:91934766-91934785 None:intergenic 30.0%
CTCCTTACTACATAAACTAT+AGG + Chr3:91937322-91937341 None:intergenic 30.0%
CTGGATGAAATTCAATTTCT+GGG - Chr3:91938262-91938281 MsG0380017099.01.T01:CDS 30.0%
CTTAAATCTGCAATATCACA+AGG - Chr3:91939055-91939074 MsG0380017099.01.T01:intron 30.0%
CTTAGGCAAAAGTTGTATAA+GGG - Chr3:91939482-91939501 MsG0380017099.01.T01:five_prime_UTR 30.0%
GAAGAAGGATGATGAAAAAA+TGG - Chr3:91938152-91938171 MsG0380017099.01.T01:intron 30.0%
GAAGACCCTATAAAAGAAAA+TGG + Chr3:91936750-91936769 None:intergenic 30.0%
GACCTATAGTTTATGTAGTA+AGG - Chr3:91937317-91937336 MsG0380017100.01.T01:intron 30.0%
GCTTGGATTTATCATAAGTA+GGG + Chr3:91936566-91936585 None:intergenic 30.0%
GTCATTAGAGTTGTTAATCA+TGG + Chr3:91939189-91939208 None:intergenic 30.0%
GTTCCTCTTAGAATTGAAAT+TGG - Chr3:91938427-91938446 MsG0380017099.01.T01:intron 30.0%
GTTTACCTGATTAATCAAGA+GGG + Chr3:91935251-91935270 None:intergenic 30.0%
GTTTGTAGTGTAAGAATATG+AGG - Chr3:91934778-91934797 MsG0380017100.01.T01:intron 30.0%
TAAGCTATCCTAGTGAATTT+AGG - Chr3:91934211-91934230 MsG0380017100.01.T01:intron 30.0%
TAGTAACAAATAAGAAGTCG+TGG + Chr3:91935955-91935974 None:intergenic 30.0%
TCAACTGTGTCATGTATTAA+GGG - Chr3:91936457-91936476 MsG0380017100.01.T01:intron 30.0%
TGGTAATTAATCTTTACCTG+TGG + Chr3:91933987-91934006 None:intergenic 30.0%
TTAAAAGTGAAAGAGGAAAC+TGG - Chr3:91939241-91939260 MsG0380017099.01.T01:CDS 30.0%
TTACATTACTTGTCTGATCA+AGG + Chr3:91937082-91937101 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG + Chr3:91936248-91936267 None:intergenic 30.0%
TTCATGGAAGAAATGAATTG+AGG + Chr3:91937691-91937710 None:intergenic 30.0%
TTCATTCAACAGGAAAAAAC+AGG + Chr3:91935333-91935352 None:intergenic 30.0%
TTCTTAGTGTAATATCTCAC+TGG - Chr3:91937770-91937789 MsG0380017099.01.T01:CDS 30.0%
TTCTTTCTCTATAAGGAGTA+AGG + Chr3:91934915-91934934 None:intergenic 30.0%
TTGATTAAATCCTTTCAACG+AGG - Chr3:91936799-91936818 MsG0380017100.01.T01:intron 30.0%
TTTACCTGATTAATCAAGAG+GGG + Chr3:91935250-91935269 None:intergenic 30.0%
! AAACATCTTTTAATCCCTTG+TGG + Chr3:91939298-91939317 None:intergenic 30.0%
! ATTCAATTTCTGGGAAATGA+AGG - Chr3:91938271-91938290 MsG0380017099.01.T01:CDS 30.0%
! CTAGTTGGATTTCCTATTTT+AGG + Chr3:91936157-91936176 None:intergenic 30.0%
! TAGTAACATGTATTTTCCAC+AGG - Chr3:91933968-91933987 MsG0380017100.01.T01:intron 30.0%
! TATCTGCAATTTGTTTGCAT+AGG - Chr3:91934025-91934044 MsG0380017100.01.T01:intron 30.0%
! TGTTTTCTGTAAATAAGAGG+AGG - Chr3:91936064-91936083 MsG0380017100.01.T01:intron 30.0%
! TTATACAACTTTTGCCTAAG+TGG + Chr3:91939482-91939501 None:intergenic 30.0%
!! AGATTTGCTACACAAGAATA+TGG - Chr3:91937101-91937120 MsG0380017100.01.T01:intron 30.0%
!! AGTTAGTGTTTTTGTACAAG+TGG + Chr3:91936188-91936207 None:intergenic 30.0%
!! GATTTGCTACACAAGAATAT+GGG - Chr3:91937102-91937121 MsG0380017100.01.T01:intron 30.0%
!! TTACTGAAACTTTGAGTTGA+CGG + Chr3:91935996-91936015 None:intergenic 30.0%
!! TTGGATTTCCTATTTTAGGA+AGG + Chr3:91936153-91936172 None:intergenic 30.0%
!!! GTTTTTTCCTGTTGAATGAA+CGG - Chr3:91935333-91935352 MsG0380017100.01.T01:intron 30.0%
!!! TTTTTTCCTGTTGAATGAAC+GGG - Chr3:91935334-91935353 MsG0380017100.01.T01:intron 30.0%
AAAGAAGCAAGTCATGTTGA+GGG - Chr3:91934929-91934948 MsG0380017100.01.T01:intron 35.0%
AAATAAGAGGAGGTAGGATT+AGG - Chr3:91936074-91936093 MsG0380017100.01.T01:intron 35.0%
AACATACACCTCCAAAATGA+AGG + Chr3:91938540-91938559 None:intergenic 35.0%
AACTGTCTCTAATGCTTTAG+TGG - Chr3:91938843-91938862 MsG0380017099.01.T01:intron 35.0%
ACAACATTAGAGAGAGACTT+GGG - Chr3:91937233-91937252 MsG0380017100.01.T01:intron 35.0%
ACAGATGAAAATGGACAAAG+GGG - Chr3:91936856-91936875 MsG0380017100.01.T01:intron 35.0%
AGACATTTGGATCTAACTGT+TGG - Chr3:91938655-91938674 MsG0380017099.01.T01:intron 35.0%
AGGTGGTAATTGTACCAATT+TGG - Chr3:91938130-91938149 MsG0380017099.01.T01:intron 35.0%
AGTAAGGAGAGTAGATAAGA+CGG - Chr3:91937333-91937352 MsG0380017099.01.T01:CDS 35.0%
AGTTAGCAGTAGTGACAATT+GGG - Chr3:91934963-91934982 MsG0380017100.01.T01:intron 35.0%
ATCTTGACGAAGAGAATATG+CGG + Chr3:91935482-91935501 None:intergenic 35.0%
ATGGACAAAGGGGATATATT+TGG - Chr3:91936866-91936885 MsG0380017100.01.T01:intron 35.0%
ATTAAAGAGACCGAAATAGC+TGG + Chr3:91935892-91935911 None:intergenic 35.0%
CACAAAATACTTCATTCCTG+TGG - Chr3:91935790-91935809 MsG0380017100.01.T01:intron 35.0%
CACAGATGAAAATGGACAAA+GGG - Chr3:91936855-91936874 MsG0380017100.01.T01:intron 35.0%
CAGCATGAACTTGTCAAAAA+TGG + Chr3:91938095-91938114 None:intergenic 35.0%
CCAGAAATTGAATTTCATCC+AGG + Chr3:91938264-91938283 None:intergenic 35.0%
CCTGGATGAAATTCAATTTC+TGG - Chr3:91938261-91938280 MsG0380017099.01.T01:CDS 35.0%
CGTTTACCTGATTAATCAAG+AGG + Chr3:91935252-91935271 None:intergenic 35.0%
CTTGAATTTCTTTGGCAAGA+AGG - Chr3:91935414-91935433 MsG0380017100.01.T01:intron 35.0%
CTTGCAGAGTTAGTAAGATT+TGG + Chr3:91939359-91939378 None:intergenic 35.0%
GAATATCTGATCTGACACTA+TGG + Chr3:91934359-91934378 None:intergenic 35.0%
GAGAAAAGAATGAACCTGAA+TGG + Chr3:91933838-91933857 None:intergenic 35.0%
GATATATTTGGCAGACATCA+TGG - Chr3:91936878-91936897 MsG0380017100.01.T01:intron 35.0%
GGACCAATTTCAATTCTAAG+AGG + Chr3:91938433-91938452 None:intergenic 35.0%
GGCTTGGATTTATCATAAGT+AGG + Chr3:91936567-91936586 None:intergenic 35.0%
GGTGTATGTTAAAGACAAGT+TGG - Chr3:91938550-91938569 MsG0380017099.01.T01:intron 35.0%
GTAGAAAAGATGGTGAAAAC+CGG - Chr3:91937268-91937287 MsG0380017100.01.T01:intron 35.0%
GTCAACTGTGTCATGTATTA+AGG - Chr3:91936456-91936475 MsG0380017100.01.T01:intron 35.0%
GTTGTTAATCATGGTCTTTC+TGG + Chr3:91939180-91939199 None:intergenic 35.0%
TAAGGCTGCTTGTAAAAACA+GGG - Chr3:91934416-91934435 MsG0380017100.01.T01:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG + Chr3:91936247-91936266 None:intergenic 35.0%
TCACAGATGAAAATGGACAA+AGG - Chr3:91936854-91936873 MsG0380017100.01.T01:intron 35.0%
TCAGTTAGAGTATATTCGGA+TGG - Chr3:91937821-91937840 MsG0380017099.01.T01:intron 35.0%
TCATCATCCTTCTTCCAAAT+TGG + Chr3:91938147-91938166 None:intergenic 35.0%
TGAAGGTTCGGATTTAAACT+TGG - Chr3:91938288-91938307 MsG0380017099.01.T01:intron 35.0%
TGAATCACATGTTTACTCAG+TGG - Chr3:91935203-91935222 MsG0380017100.01.T01:intron 35.0%
TGCAATATCACAAGGCAAAT+GGG - Chr3:91939063-91939082 MsG0380017099.01.T01:intron 35.0%
TTAAGGCTGCTTGTAAAAAC+AGG - Chr3:91934415-91934434 MsG0380017100.01.T01:intron 35.0%
TTAGAATTGAAATTGGTCCC+CGG - Chr3:91938434-91938453 MsG0380017099.01.T01:intron 35.0%
TTCACAATGGTTTCACTTGT+AGG + Chr3:91935187-91935206 None:intergenic 35.0%
TTCTCCAAAAACCACACAAA+TGG - Chr3:91933495-91933514 MsG0380017100.01.T01:exon 35.0%
TTCTGTAAATAAGAGGAGGT+AGG - Chr3:91936068-91936087 MsG0380017100.01.T01:intron 35.0%
TTGCAGCTAATGTAGCATTA+AGG - Chr3:91936037-91936056 MsG0380017100.01.T01:intron 35.0%
! AAAGCATTAGAGACAGTTCT+CGG + Chr3:91938841-91938860 None:intergenic 35.0%
! AGCTTGTTCAAAAGCAAATC+TGG + Chr3:91935594-91935613 None:intergenic 35.0%
! ATGCATTGGTATGCGTAATA+GGG - Chr3:91936434-91936453 MsG0380017100.01.T01:intron 35.0%
! ATTGATTCTGTTTATGCTGC+TGG - Chr3:91938343-91938362 MsG0380017099.01.T01:intron 35.0%
! ATTTCTGGGAAATGAAGGTT+CGG - Chr3:91938276-91938295 MsG0380017099.01.T01:intron 35.0%
! CTTGATTTTGCCAGCTATTT+CGG - Chr3:91935879-91935898 MsG0380017100.01.T01:intron 35.0%
! GACTATAGCAAACCTTTTAG+TGG - Chr3:91936664-91936683 MsG0380017100.01.T01:intron 35.0%
! GACTTGCTTCTTTCTCTATA+AGG + Chr3:91934922-91934941 None:intergenic 35.0%
! GTTTTTGTACAAGTGGTAGT+AGG + Chr3:91936181-91936200 None:intergenic 35.0%
! TATGCATTGGTATGCGTAAT+AGG - Chr3:91936433-91936452 MsG0380017100.01.T01:intron 35.0%
! TCTAAAGTGGAAACATTTGC+TGG - Chr3:91935641-91935660 MsG0380017100.01.T01:intron 35.0%
! TGAGAGATTGCAGTTTTTGA+GGG + Chr3:91933562-91933581 None:intergenic 35.0%
! TGTATTACATAGAGTGGACT+TGG + Chr3:91938808-91938827 None:intergenic 35.0%
! TTCACCATCTTTTCTACAAG+AGG + Chr3:91937265-91937284 None:intergenic 35.0%
! TTTTGCTTACAAACGAAACC+AGG + Chr3:91935279-91935298 None:intergenic 35.0%
!! AGAAGGCATCAACAAATGAT+GGG + Chr3:91934868-91934887 None:intergenic 35.0%
!! AGCTTGCTACTTAAAGTTCA+AGG + Chr3:91935861-91935880 None:intergenic 35.0%
!! GGCTGTTTTCTGTAAATAAG+AGG - Chr3:91936061-91936080 MsG0380017100.01.T01:intron 35.0%
!!! ATTTTCCATTTTTGAGGCTG+TGG - Chr3:91935152-91935171 MsG0380017100.01.T01:intron 35.0%
!!! CGCTTATTTTATGCTCGAAT+TGG + Chr3:91937151-91937170 None:intergenic 35.0%
AAAATAGCCACTTCTTCAGC+AGG + Chr3:91939334-91939353 None:intergenic 40.0%
AAAGAAGCTCTTCAAAGCTC+TGG - Chr3:91938201-91938220 MsG0380017099.01.T01:CDS 40.0%
AAATAAGCGTAGAGGAGATG+AGG - Chr3:91937162-91937181 MsG0380017100.01.T01:intron 40.0%
AAGAATATGGGACAGAGTGT+TGG - Chr3:91937114-91937133 MsG0380017100.01.T01:intron 40.0%
AATGCCGAATTAGCCGATTA+TGG - Chr3:91933760-91933779 MsG0380017100.01.T01:exon 40.0%
AATGCTACATTAGCTGCAAC+CGG + Chr3:91936036-91936055 None:intergenic 40.0%
AATGTCAAGTTCAAGGAGAC+TGG - Chr3:91933942-91933961 MsG0380017100.01.T01:CDS 40.0%
ACAGTACAAGATATAGGCAC+AGG + Chr3:91934760-91934779 None:intergenic 40.0%
AGCTGCCATACCTGTTATTA+CGG - Chr3:91935610-91935629 MsG0380017100.01.T01:intron 40.0%
ATAATCGGCTAATTCGGCAT+TGG + Chr3:91933761-91933780 None:intergenic 40.0%
ATATCCAGGAGAGATATTCC+TGG - Chr3:91938481-91938500 MsG0380017099.01.T01:intron 40.0%
ATGCCGAATTAGCCGATTAT+GGG - Chr3:91933761-91933780 MsG0380017100.01.T01:exon 40.0%
ATGGCACAATCAATATGGCT+TGG + Chr3:91936583-91936602 None:intergenic 40.0%
ATGTCAATTTGCCTGTTTGC+TGG + Chr3:91938974-91938993 None:intergenic 40.0%
ATTGTCACTACTGCTAACTC+TGG + Chr3:91934962-91934981 None:intergenic 40.0%
CAACATTAGAGAGAGACTTG+GGG - Chr3:91937234-91937253 MsG0380017100.01.T01:intron 40.0%
CAATGGTTTCACTTGTAGGT+CGG + Chr3:91935183-91935202 None:intergenic 40.0%
CAATTGGAATGAGTTCCTTG+TGG - Chr3:91938903-91938922 MsG0380017099.01.T01:intron 40.0%
CACTCATGCTTTCTATAGCT+TGG + Chr3:91936634-91936653 None:intergenic 40.0%
CACTGGATGTATTCATGCAT+CGG - Chr3:91937787-91937806 MsG0380017099.01.T01:CDS 40.0%
CAGCTAATGTAGCATTAAGG+AGG - Chr3:91936040-91936059 MsG0380017100.01.T01:intron 40.0%
CGAGCATAAAATAAGCGTAG+AGG - Chr3:91937154-91937173 MsG0380017100.01.T01:intron 40.0%
CGTACAATACACCAAATGGT+GGG - Chr3:91934447-91934466 MsG0380017100.01.T01:intron 40.0%
CTGCAATATCACAAGGCAAA+TGG - Chr3:91939062-91939081 MsG0380017099.01.T01:intron 40.0%
CTGCTTGTAAAAACAGGGTA+AGG - Chr3:91934421-91934440 MsG0380017100.01.T01:intron 40.0%
CTGTGTCATGTATTAAGGGA+CGG - Chr3:91936461-91936480 MsG0380017100.01.T01:intron 40.0%
GAAAGAAGCAAGTCATGTTG+AGG - Chr3:91934928-91934947 MsG0380017100.01.T01:intron 40.0%
GAAGGATTGTTGTGTAAGTG+TGG + Chr3:91936135-91936154 None:intergenic 40.0%
GACAACATTAGAGAGAGACT+TGG - Chr3:91937232-91937251 MsG0380017100.01.T01:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG - Chr3:91937355-91937374 MsG0380017099.01.T01:CDS 40.0%
GAGTTAGCAGTAGTGACAAT+TGG - Chr3:91934962-91934981 MsG0380017100.01.T01:intron 40.0%
GGTTAAACGTAGCACTTTAG+AGG - Chr3:91937041-91937060 MsG0380017100.01.T01:intron 40.0%
GTACAATTACCACCTAAACC+AGG + Chr3:91938125-91938144 None:intergenic 40.0%
GTGCAGTTCACAGATGAAAA+TGG - Chr3:91936847-91936866 MsG0380017100.01.T01:intron 40.0%
GTTAGAGTATATTCGGATGG+AGG - Chr3:91937824-91937843 MsG0380017099.01.T01:intron 40.0%
GTTAGCAGTAGTGACAATTG+GGG - Chr3:91934964-91934983 MsG0380017100.01.T01:intron 40.0%
TAAGAGGAACTCCCTGAAAT+TGG + Chr3:91938417-91938436 None:intergenic 40.0%
TAATCAAGAGGGGAAGATCA+CGG + Chr3:91935240-91935259 None:intergenic 40.0%
TAATCAGGTAAACGATGTCC+TGG - Chr3:91935258-91935277 MsG0380017100.01.T01:intron 40.0%
TACAATGGTATTCGTCCCTA+TGG - Chr3:91933795-91933814 MsG0380017100.01.T01:exon 40.0%
TACACGATTGAGGCAATGAT+GGG - Chr3:91935677-91935696 MsG0380017100.01.T01:intron 40.0%
TACGGGTCGAAAATCTAAAG+TGG - Chr3:91935628-91935647 MsG0380017100.01.T01:intron 40.0%
TAGAATTGAAATTGGTCCCC+GGG - Chr3:91938435-91938454 MsG0380017099.01.T01:intron 40.0%
TATCCAGGAGAGATATTCCT+GGG - Chr3:91938482-91938501 MsG0380017099.01.T01:intron 40.0%
TCTTCCCCTCTTGATTAATC+AGG - Chr3:91935243-91935262 MsG0380017100.01.T01:intron 40.0%
TGAATTGAGGTGAGTCCTAT+TGG + Chr3:91937578-91937597 None:intergenic 40.0%
TGCAGAACAGATTTGAGAGA+AGG + Chr3:91934885-91934904 None:intergenic 40.0%
TGTCAATTTGCCTGTTTGCT+GGG + Chr3:91938973-91938992 None:intergenic 40.0%
TGTGGTAAGACTAGCAAGAT+AGG - Chr3:91937200-91937219 MsG0380017100.01.T01:intron 40.0%
TTAGCAGTAGTGACAATTGG+GGG - Chr3:91934965-91934984 MsG0380017100.01.T01:intron 40.0%
TTATACCACTAAGTGGTGGT+CGG + Chr3:91937493-91937512 None:intergenic 40.0%
TTCCATTTGAACAGCCACAA+GGG - Chr3:91939281-91939300 MsG0380017099.01.T01:intron 40.0%
TTGGATGTAGAAGTTTGGAG+TGG + Chr3:91938015-91938034 None:intergenic 40.0%
TTGTAAGACCTACACGATTG+AGG - Chr3:91935667-91935686 MsG0380017100.01.T01:intron 40.0%
TTTCCATTTGAACAGCCACA+AGG - Chr3:91939280-91939299 MsG0380017099.01.T01:intron 40.0%
! AGAATATGGGACAGAGTGTT+GGG - Chr3:91937115-91937134 MsG0380017100.01.T01:intron 40.0%
! AGCATCAGACCTGTTTTCAA+AGG + Chr3:91935761-91935780 None:intergenic 40.0%
! CGAGATACAGTCTTCTCTTT+TGG - Chr3:91938574-91938593 MsG0380017099.01.T01:intron 40.0%
! CTGCAATTTGTTTGCATAGG+AGG - Chr3:91934028-91934047 MsG0380017100.01.T01:intron 40.0%
! GACACCATTTGTGTGGTTTT+TGG + Chr3:91933502-91933521 None:intergenic 40.0%
! GATTTTCGACCCGTAATAAC+AGG + Chr3:91935623-91935642 None:intergenic 40.0%
! GTGAGAGATTGCAGTTTTTG+AGG + Chr3:91933563-91933582 None:intergenic 40.0%
! TACATAGAGTGGACTTGGTT+TGG + Chr3:91938803-91938822 None:intergenic 40.0%
! TCTCTATGGAGCCTTCATTT+TGG - Chr3:91938526-91938545 MsG0380017099.01.T01:intron 40.0%
!! ACAGTCTTCTCTTTTGGAGA+GGG - Chr3:91938580-91938599 MsG0380017099.01.T01:intron 40.0%
!! AGAGATTGCAGTTTTTGAGG+GGG + Chr3:91933560-91933579 None:intergenic 40.0%
!! CAATCTTTGGAGGAAGCATT+AGG + Chr3:91936960-91936979 None:intergenic 40.0%
!! GAGAAGGCATCAACAAATGA+TGG + Chr3:91934869-91934888 None:intergenic 40.0%
!! GAGAGATTGCAGTTTTTGAG+GGG + Chr3:91933561-91933580 None:intergenic 40.0%
!! GATTCTTTGAGTTGTCGACT+CGG + Chr3:91933672-91933691 None:intergenic 40.0%
!! GGAAAGTGTTGGAATCTCTA+TGG - Chr3:91938512-91938531 MsG0380017099.01.T01:intron 40.0%
!! GTTAGTACTCGTTTTGTTGG+AGG - Chr3:91936904-91936923 MsG0380017100.01.T01:intron 40.0%
!! TACAGTCTTCTCTTTTGGAG+AGG - Chr3:91938579-91938598 MsG0380017099.01.T01:intron 40.0%
!! TTGGATCTAACTGTTGGTTC+TGG - Chr3:91938661-91938680 MsG0380017099.01.T01:intron 40.0%
!!! TTTTGTTGGAGGCATCATCA+TGG - Chr3:91936915-91936934 MsG0380017100.01.T01:intron 40.0%
AAACACAACCTAGCAGACCA+AGG + Chr3:91939097-91939116 None:intergenic 45.0%
AACACAACCTAGCAGACCAA+GGG + Chr3:91939096-91939115 None:intergenic 45.0%
AACCTGAATGGCTTCCCAAA+TGG + Chr3:91933826-91933845 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG + Chr3:91934296-91934315 None:intergenic 45.0%
AAGGAGAGTAGATAAGACGG+AGG - Chr3:91937336-91937355 MsG0380017099.01.T01:CDS 45.0%
AATACCATTGTACCGCGAAC+AGG + Chr3:91933787-91933806 None:intergenic 45.0%
ACACAGTGAAAGCTGTCTCT+TGG - Chr3:91937637-91937656 MsG0380017099.01.T01:intron 45.0%
ACTTTCGTCCCTTTGCTCTA+AGG + Chr3:91939634-91939653 None:intergenic 45.0%
AGAGATATTCCTGGGAAGCA+AGG - Chr3:91938490-91938509 MsG0380017099.01.T01:intron 45.0%
AGCGCCTCTTGTAGAAAAGA+TGG - Chr3:91937258-91937277 MsG0380017100.01.T01:intron 45.0%
AGGAAACTGGAGCAACTATC+AGG - Chr3:91939254-91939273 MsG0380017099.01.T01:intron 45.0%
AGGATGTTGCGTTGTATGTG+TGG - Chr3:91937182-91937201 MsG0380017100.01.T01:intron 45.0%
AGGCCCATAATCGGCTAATT+CGG + Chr3:91933767-91933786 None:intergenic 45.0%
AGTGGGCAAATGTCACAAGA+TGG - Chr3:91935361-91935380 MsG0380017100.01.T01:intron 45.0%
ATCACAAGGCAAATGGGCAA+GGG - Chr3:91939069-91939088 MsG0380017099.01.T01:intron 45.0%
ATCCCTTGTGGCTGTTCAAA+TGG + Chr3:91939286-91939305 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG + Chr3:91936243-91936262 None:intergenic 45.0%
ATGGTACATGGAGATGATGC+TGG - Chr3:91936934-91936953 MsG0380017100.01.T01:intron 45.0%
CAAGTATTCTGCTCTGTTGC+AGG - Chr3:91935544-91935563 MsG0380017100.01.T01:intron 45.0%
CAGGTATGGTTGGATGCTAT+TGG - Chr3:91936988-91937007 MsG0380017100.01.T01:intron 45.0%
CATCATTGCCTCAATCGTGT+AGG + Chr3:91935678-91935697 None:intergenic 45.0%
CCACTTAGTGGTATAAGGCT+TGG - Chr3:91937497-91937516 MsG0380017099.01.T01:CDS 45.0%
CGTTGAAAAGCTGTGACCTA+AGG - Chr3:91935118-91935137 MsG0380017100.01.T01:intron 45.0%
CTACACGATTGAGGCAATGA+TGG - Chr3:91935676-91935695 MsG0380017100.01.T01:intron 45.0%
CTTGAGAGACACCATTTGTG+TGG + Chr3:91933509-91933528 None:intergenic 45.0%
CTTTCGTCCCTTTGCTCTAA+GGG + Chr3:91939633-91939652 None:intergenic 45.0%
GAAGTGGGGAAAACAGAATC+TGG + Chr3:91936699-91936718 None:intergenic 45.0%
GACCACCACTTAGTGGTATA+AGG - Chr3:91937492-91937511 MsG0380017099.01.T01:CDS 45.0%
GAGATATTCCTGGGAAGCAA+GGG - Chr3:91938491-91938510 MsG0380017099.01.T01:intron 45.0%
GCATCCAACCATACCTGTAT+CGG + Chr3:91936985-91937004 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - Chr3:91934446-91934465 MsG0380017100.01.T01:intron 45.0%
GCTGCCATACCTGTTATTAC+GGG - Chr3:91935611-91935630 MsG0380017100.01.T01:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - Chr3:91934443-91934462 MsG0380017100.01.T01:intron 45.0%
GCTTGAACCCTTAGAGCAAA+GGG - Chr3:91939623-91939642 MsG0380017099.01.T01:intron 45.0%
GGAGGAGATTGAGAAGATGA+AGG - Chr3:91937842-91937861 MsG0380017099.01.T01:intron 45.0%
GGGCAATTGCATTTCGAGAT+AGG - Chr3:91938600-91938619 MsG0380017099.01.T01:intron 45.0%
GTCATGTATTAAGGGACGGA+GGG - Chr3:91936465-91936484 MsG0380017100.01.T01:intron 45.0%
GTGGGCAAATGTCACAAGAT+GGG - Chr3:91935362-91935381 MsG0380017100.01.T01:intron 45.0%
TAAGCACTTGCGACACTGTT+TGG + Chr3:91934297-91934316 None:intergenic 45.0%
TATCACAAGGCAAATGGGCA+AGG - Chr3:91939068-91939087 MsG0380017099.01.T01:intron 45.0%
TATTTGGCAGACATCATGGG+CGG - Chr3:91936882-91936901 MsG0380017100.01.T01:intron 45.0%
TCCAGAAGAGGCAGAAAATG+AGG - Chr3:91935455-91935474 MsG0380017100.01.T01:intron 45.0%
TCCCAAATGGCGTAACCATA+GGG + Chr3:91933813-91933832 None:intergenic 45.0%
TCCCTATGGTTACGCCATTT+GGG - Chr3:91933809-91933828 MsG0380017100.01.T01:exon 45.0%
TCGACCCGTAATAACAGGTA+TGG + Chr3:91935618-91935637 None:intergenic 45.0%
TGCACAACATGATGACCACA+AGG + Chr3:91938921-91938940 None:intergenic 45.0%
TGCTTGAACCCTTAGAGCAA+AGG - Chr3:91939622-91939641 MsG0380017099.01.T01:intron 45.0%
TGTCATGTATTAAGGGACGG+AGG - Chr3:91936464-91936483 MsG0380017100.01.T01:intron 45.0%
TTCCCAAATGGCGTAACCAT+AGG + Chr3:91933814-91933833 None:intergenic 45.0%
! AAAACCGGCTTAGGTGGTTT+GGG - Chr3:91937283-91937302 MsG0380017100.01.T01:intron 45.0%
! AAGATGGTGAAAACCGGCTT+AGG - Chr3:91937274-91937293 MsG0380017100.01.T01:intron 45.0%
! ACCTCATTTTCTGCCTCTTC+TGG + Chr3:91935459-91935478 None:intergenic 45.0%
! ACCTGTATCGGTGCAATCTT+TGG + Chr3:91936973-91936992 None:intergenic 45.0%
! AGATTGCACCGATACAGGTA+TGG - Chr3:91936974-91936993 MsG0380017100.01.T01:intron 45.0%
! AGCCTTATACCACTAAGTGG+TGG + Chr3:91937497-91937516 None:intergenic 45.0%
! CAAGTGGTAGTAGGACTAGT+TGG + Chr3:91936172-91936191 None:intergenic 45.0%
! CAGACCTGTTTTCAAAGGCA+CGG + Chr3:91935756-91935775 None:intergenic 45.0%
! CCAAGCCTTATACCACTAAG+TGG + Chr3:91937500-91937519 None:intergenic 45.0%
! CTATGGAGCCTTCATTTTGG+AGG - Chr3:91938529-91938548 MsG0380017099.01.T01:intron 45.0%
! GCATTGAAGTCTTGTGACCT+AGG + Chr3:91933718-91933737 None:intergenic 45.0%
! GCGGTTAGTACTCGTTTTGT+TGG - Chr3:91936901-91936920 MsG0380017100.01.T01:intron 45.0%
! GTCAATTTGCCTGTTTGCTG+GGG + Chr3:91938972-91938991 None:intergenic 45.0%
! TCCAAAGATTGCACCGATAC+AGG - Chr3:91936969-91936988 MsG0380017100.01.T01:intron 45.0%
! TGTATCGGTGCAATCTTTGG+AGG + Chr3:91936970-91936989 None:intergenic 45.0%
! TTGAATGAACGGGCTTCAGT+GGG - Chr3:91935344-91935363 MsG0380017100.01.T01:intron 45.0%
! TTTCCCGTGCCTTTGAAAAC+AGG - Chr3:91935749-91935768 MsG0380017100.01.T01:intron 45.0%
!! AGACCTGTTTTCAAAGGCAC+GGG + Chr3:91935755-91935774 None:intergenic 45.0%
!! GAAAGTTTTGGCCAAGGTTG+TGG + Chr3:91935733-91935752 None:intergenic 45.0%
!! GACAAGAAAGCATTGCAAGC+AGG - Chr3:91935701-91935720 MsG0380017100.01.T01:intron 45.0%
!! TCAAAGGCACGGGAAAGTTT+TGG + Chr3:91935745-91935764 None:intergenic 45.0%
!! TGCTTGTACTTGGGTTAGTG+CGG - Chr3:91934680-91934699 MsG0380017100.01.T01:CDS 45.0%
!! ACATATTTATATAAAAATAA+AGG + Chr3:91939130-91939149 None:intergenic 5.0%
!! ATTTATATAACAATAAAAAA+AGG + Chr3:91934522-91934541 None:intergenic 5.0%
!! CAAAAATTAATAAAAAAAAT+AGG + Chr3:91938688-91938707 None:intergenic 5.0%
!! TATATATATATAATTAAGTT+TGG + Chr3:91934007-91934026 None:intergenic 5.0%
!! TTTATATAACAATAAAAAAA+GGG + Chr3:91934521-91934540 None:intergenic 5.0%
!! TTTATTGTTATATAAATTTA+AGG - Chr3:91934398-91934417 MsG0380017100.01.T01:intron 5.0%
!!! TTTTATATAAATATGTTATA+CGG - Chr3:91939134-91939153 MsG0380017099.01.T01:intron 5.0%
AACACTTTCCCTTGCTTCCC+AGG + Chr3:91938502-91938521 None:intergenic 50.0%
ACCTGCCACAGCCTCAAAAA+TGG + Chr3:91935160-91935179 None:intergenic 50.0%
ACTAAAGCTCCCTCATACGC+AGG + Chr3:91934487-91934506 None:intergenic 50.0%
AGGAGATCCTGCTGAAGAAG+TGG - Chr3:91939324-91939343 MsG0380017099.01.T01:intron 50.0%
AGTGACAATTGGGGGTGGAA+AGG - Chr3:91934973-91934992 MsG0380017100.01.T01:CDS 50.0%
AGTTCATGCTGTGCATTGCC+TGG - Chr3:91938104-91938123 MsG0380017099.01.T01:intron 50.0%
CTAAAGCTCCCTCATACGCA+GGG + Chr3:91934486-91934505 None:intergenic 50.0%
CTGAAGCCCGTTCATTCAAC+AGG + Chr3:91935343-91935362 None:intergenic 50.0%
CTTCCCAGGAATATCTCTCC+TGG + Chr3:91938488-91938507 None:intergenic 50.0%
GAAGCTGCATCCTCGTTGAA+AGG + Chr3:91936812-91936831 None:intergenic 50.0%
GACTCAGATCAAAGAACCCC+TGG - Chr3:91938243-91938262 MsG0380017099.01.T01:CDS 50.0%
GGAACTTGAAGAGAAGCTCG+TGG - Chr3:91934994-91935013 MsG0380017100.01.T01:CDS 50.0%
GGCATGAACATGTGTGCGAT+GGG + Chr3:91938947-91938966 None:intergenic 50.0%
GGTCACAAGACTTCAATGCG+TGG - Chr3:91933719-91933738 MsG0380017100.01.T01:exon 50.0%
GTCCCTATGGTTACGCCATT+TGG - Chr3:91933808-91933827 MsG0380017100.01.T01:exon 50.0%
TCACAAGGCAAATGGGCAAG+GGG - Chr3:91939070-91939089 MsG0380017099.01.T01:intron 50.0%
TCTGATCTGACACTATGGGC+TGG + Chr3:91934354-91934373 None:intergenic 50.0%
TGCTCATGCAACTCCAGAAG+AGG - Chr3:91935443-91935462 MsG0380017100.01.T01:intron 50.0%
TGCTGTGCATTGCCTGGTTT+AGG - Chr3:91938110-91938129 MsG0380017099.01.T01:intron 50.0%
TGGATGCTGCAGCCACTAAA+AGG + Chr3:91936679-91936698 None:intergenic 50.0%
TGGCATGAACATGTGTGCGA+TGG + Chr3:91938948-91938967 None:intergenic 50.0%
TGTGCATTGCCTGGTTTAGG+TGG - Chr3:91938113-91938132 MsG0380017099.01.T01:intron 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG - Chr3:91934491-91934510 MsG0380017100.01.T01:intron 50.0%
! ATGGTGAAAACCGGCTTAGG+TGG - Chr3:91937277-91937296 MsG0380017100.01.T01:intron 50.0%
! ATTTGCCTGTTTGCTGGGGA+TGG + Chr3:91938968-91938987 None:intergenic 50.0%
! GAAAACCGGCTTAGGTGGTT+TGG - Chr3:91937282-91937301 MsG0380017100.01.T01:intron 50.0%
! GTGGAAGTGTGGTGATATCC+AGG - Chr3:91938467-91938486 MsG0380017099.01.T01:intron 50.0%
! GTTGAATGAACGGGCTTCAG+TGG - Chr3:91935343-91935362 MsG0380017100.01.T01:intron 50.0%
! TGCACCGATACAGGTATGGT+TGG - Chr3:91936978-91936997 MsG0380017100.01.T01:intron 50.0%
! TGGGAAGCAAGGGAAAGTGT+TGG - Chr3:91938501-91938520 MsG0380017099.01.T01:intron 50.0%
!! ATATGGGACAGAGTGTTGGG+CGG - Chr3:91937118-91937137 MsG0380017100.01.T01:intron 50.0%
!! GATTGCAGTTTTTGAGGGGG+AGG + Chr3:91933557-91933576 None:intergenic 50.0%
!! GGAGGCATCATCATGGTACA+TGG - Chr3:91936922-91936941 MsG0380017100.01.T01:intron 50.0%
!! TCTGACACTATGGGCTGGTT+TGG + Chr3:91934349-91934368 None:intergenic 50.0%
!! TGAGTTGTCGACTCGGTCTT+TGG + Chr3:91933665-91933684 None:intergenic 50.0%
!! TTTTTGAGGGGGAGGAGAAG+AGG + Chr3:91933549-91933568 None:intergenic 50.0%
!!! AGTGGTTTTGGCAGAGAAGG+TGG + Chr3:91933632-91933651 None:intergenic 50.0%
!!! TCCATTTTTGAGGCTGTGGC+AGG - Chr3:91935156-91935175 MsG0380017100.01.T01:intron 50.0%
!!! TGCAGTGGTTTTGGCAGAGA+AGG + Chr3:91933635-91933654 None:intergenic 50.0%
ACCGCGAACAGGCCCATAAT+CGG + Chr3:91933776-91933795 None:intergenic 55.0%
ACTTCCACTAGACACGTCCC+GGG + Chr3:91938455-91938474 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG + Chr3:91936240-91936259 None:intergenic 55.0%
CACTTCCACTAGACACGTCC+CGG + Chr3:91938456-91938475 None:intergenic 55.0%
CATGCCCAAACCACCTAAGC+CGG + Chr3:91937290-91937309 None:intergenic 55.0%
CGCCATTTGGGAAGCCATTC+AGG - Chr3:91933821-91933840 MsG0380017100.01.T01:exon 55.0%
GCAGTAGTGACAATTGGGGG+TGG - Chr3:91934968-91934987 MsG0380017100.01.T01:CDS 55.0%
GGACGTGTCTAGTGGAAGTG+TGG - Chr3:91938456-91938475 MsG0380017099.01.T01:intron 55.0%
GGCGGAGAATGATTGGGGAA+CGG + Chr3:91933585-91933604 None:intergenic 55.0%
GGGGAAGATCACGGTAGCTA+TGG + Chr3:91935231-91935250 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + Chr3:91936239-91936258 None:intergenic 55.0%
GTCTTTGGTCTCTGCTGCAG+TGG + Chr3:91933650-91933669 None:intergenic 55.0%
GTGACCTAGGCGTGATGACT+CGG + Chr3:91933705-91933724 None:intergenic 55.0%
TCATGCCATCCCCAGCAAAC+AGG - Chr3:91938960-91938979 MsG0380017099.01.T01:intron 55.0%
! AGAAGGTGGCGGTGAAAGGT+TGG + Chr3:91933618-91933637 None:intergenic 55.0%
! GGTCTCTGCTGCAGTGGTTT+TGG + Chr3:91933644-91933663 None:intergenic 55.0%
! GGTGGTTTGGGCATGTAGAG+AGG - Chr3:91937295-91937314 MsG0380017100.01.T01:intron 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG - Chr3:91934492-91934511 MsG0380017100.01.T01:intron 55.0%
!! GCACGGGAAAGTTTTGGCCA+AGG + Chr3:91935739-91935758 None:intergenic 55.0%
!! GGTTTTGGCAGAGAAGGTGG+CGG + Chr3:91933629-91933648 None:intergenic 55.0%
!! GTTTTGGCCAAGGTTGTGGC+TGG + Chr3:91935729-91935748 None:intergenic 55.0%
!! TGGCGGTGAAAGGTTGGTGA+CGG + Chr3:91933612-91933631 None:intergenic 55.0%
CTTCCACTAGACACGTCCCG+GGG + Chr3:91938454-91938473 None:intergenic 60.0%
GCAGGAACCAGCCACAACCT+TGG - Chr3:91935719-91935738 MsG0380017100.01.T01:intron 60.0%
GCCGATTATGGGCCTGTTCG+CGG - Chr3:91933772-91933791 MsG0380017100.01.T01:exon 60.0%
TCATACGCAGGGTCCGGGAA+GGG + Chr3:91934475-91934494 None:intergenic 60.0%
TGAGGGGGAGGAGAAGAGGT+GGG + Chr3:91933545-91933564 None:intergenic 60.0%
TGGGCCTGTTCGCGGTACAA+TGG - Chr3:91933780-91933799 MsG0380017100.01.T01:exon 60.0%
TTCCCGGACCCTGCGTATGA+GGG - Chr3:91934475-91934494 MsG0380017100.01.T01:intron 60.0%
TTGAGGGGGAGGAGAAGAGG+TGG + Chr3:91933546-91933565 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - Chr3:91934459-91934478 MsG0380017100.01.T01:intron 60.0%
! GCAGAGAAGGTGGCGGTGAA+AGG + Chr3:91933622-91933641 None:intergenic 60.0%
!! CCTAGGCGTGATGACTCGGT+CGG + Chr3:91933701-91933720 None:intergenic 60.0%
!! CGGTGAAAGGTTGGTGACGG+CGG + Chr3:91933609-91933628 None:intergenic 60.0%
!! CTAGGCGTGATGACTCGGTC+GGG + Chr3:91933700-91933719 None:intergenic 60.0%
!! GCGGTGGCGGAGAATGATTG+GGG + Chr3:91933590-91933609 None:intergenic 60.0%
!! GGCGGTGGCGGAGAATGATT+GGG + Chr3:91933591-91933610 None:intergenic 60.0%
!! TAGGCGTGATGACTCGGTCG+GGG + Chr3:91933699-91933718 None:intergenic 60.0%
!! TGAAAGGTTGGTGACGGCGG+TGG + Chr3:91933606-91933625 None:intergenic 60.0%
CAAGGGGCCCTTGGTCTGCT+AGG - Chr3:91939086-91939105 MsG0380017099.01.T01:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + Chr3:91934474-91934493 None:intergenic 65.0%
CCGACCGAGTCATCACGCCT+AGG - Chr3:91933698-91933717 MsG0380017100.01.T01:exon 65.0%
CGGGAAGGGGTCCCACCATT+TGG + Chr3:91934461-91934480 None:intergenic 65.0%
CTCATACGCAGGGTCCGGGA+AGG + Chr3:91934476-91934495 None:intergenic 65.0%
CTCCCTCATACGCAGGGTCC+GGG + Chr3:91934480-91934499 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+AGG - Chr3:91934474-91934493 MsG0380017100.01.T01:intron 65.0%
GCAAATGGGCAAGGGGCCCT+TGG - Chr3:91939077-91939096 MsG0380017099.01.T01:intron 65.0%
GCTCCCTCATACGCAGGGTC+CGG + Chr3:91934481-91934500 None:intergenic 65.0%
!! AAGGTTGGTGACGGCGGTGG+CGG + Chr3:91933603-91933622 None:intergenic 65.0%
!! CGGCGGTGGCGGAGAATGAT+TGG + Chr3:91933592-91933611 None:intergenic 65.0%
GGTCCCCGGGACGTGTCTAG+TGG - Chr3:91938448-91938467 MsG0380017099.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 91933488 91939709 91933488 ID=MsG0380017100.01;
Chr3 mRNA 91933488 91939709 91933488 ID=MsG0380017100.01.T01;Parent=MsG0380017100.01
Chr3 exon 91933488 91933969 91933488 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91933828 91933969 91933828 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 CDS 91934090 91934162 91934090 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91934090 91934162 91934090 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91934647 91934773 91934647 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91934647 91934773 91934647 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91934967 91935065 91934967 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91934967 91935065 91934967 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91936207 91936369 91936207 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91936207 91936369 91936207 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91937384 91937631 91937384 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91937384 91937631 91937384 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91937721 91937834 91937721 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91937721 91937834 91937721 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91937933 91938019 91937933 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91937933 91938019 91937933 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91938182 91938291 91938182 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91938182 91938291 91938182 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91938709 91938760 91938709 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91938709 91938760 91938709 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91939208 91939264 91939208 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91939208 91939264 91939208 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Chr3 CDS 91939396 91939683 91939396 ID=MsG0380017100.01.T01.cds;Parent=MsG0380017100.01.T01
Chr3 exon 91939396 91939709 91939396 ID=MsG0380017100.01.T01.exon;Parent=MsG0380017100.01.T01
Gene Sequence

>MsG0380017100.01.T01

ATGGTGTCTCTCAAGCTATCTTCTTTCACCCACCTCTTCTCCTCCCCCTCAAAAACTGCAATCTCTCACCGTTCCCCAATCATTCTCCGCCACCGCCGTCACCAACCTTTCACCGCCACCTTCTCTGCCAAAACCACTGCAGCAGAGACCAAAGACCGAGTCGACAACTCAAAGAATCGAGTCCCCGACCGAGTCATCACGCCTAGGTCACAAGACTTCAATGCGTGGTATCTTGATATCATAGCCAATGCCGAATTAGCCGATTATGGGCCTGTTCGCGGTACAATGGATTATTTGAATGTCAAGTTCAAGGAGACTGGACATAGTAACATGTATTTTCCACAGGGTAAGGCTGCGTACAATACACCAAATGGTGGGACCCCTTCCCGGACCCTGCTTTATTCCTTACTCCTTATAGAGAAAGAAGCAAGTCATGTTGAGGGTTTCAGTCCAGAGTTAGCAGTAGTGACAATTGGGGGTGGAAAGGAACTTGAAGAGAAGCTCGTGGTCCGACCTACAAGTGAAACCATTGTGAATCACATGTTTACTCAGTGGATCCATAGCTACCGTGATCTTCCCCTCTTGATTAATCAGTGGGCAAATGTCACAAGATGGGAGATGCGCACTAAACCATTTGTTAGAACTCTTGAATTTCTTTGGCAAGAAGGTCATACTGCTCATGCAACTCCAGAAGAGGCAGAAAATGAGGCTAAACAAATGATTGACATCTATACCAGATTTGCTTTTGAACAAGCTGCCATACCTGTTATTACGGGTCGAAAATCTAAAGTGGAAACATTTGCTGGTGCTTGTAAGACCTACACGATTGAGGCAATGATGGGTGACAAGAAAGCATTGCAAGCAGGAACCAGCCACAACCTTGGCCAAAACTTTCCCGTGCCTTTGAAAACAGGTCTGATGCTGTTACAGAACACAAAATACTTCATTCCTGTGGACTTCTCAAAATGTATGCTTGTGCAGTTCACAGATGAAAATGGACAAAGGGGATATATTTGGCAGACATCATGGGCGGTTAGTACTCGTTTTGTTGGAGGCATCATCATGGTACATGGAGATGATGCTGGCCTAATGCTTCCTCCAAAGATTGCACCGATACAGGTGGTAATTGTACCAATTTGGAAGAAGGATGATGAAAAAATGGAAGTTCTTAGTGCAGCATTGTCTGTAAAAGAAGCTCTTCAAAGCTCTGGCGTTAAAGGAGTTCCTCTTAGAATTGAAATTGGTCCCCGGGACGTGTCTAGTGGAAGTGTGGTGATATCCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTGTTGGAATCTCTATGGAGCCTTCATTTTGGAGATGTGAGCACATACGAAGATCTTAAATCTGCAATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGCGATGAAGATGAGTTAAAAGTGAAAGAGGAAACTGGAGCAACTATCAGGTGTTTTCCATTTGAACAGCCACAAGGGATTAAAAGATGTTTGATGACAGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA

Protein sequence

>MsG0380017100.01.T01

MVSLKLSSFTHLFSSPSKTAISHRSPIILRHRRHQPFTATFSAKTTAAETKDRVDNSKNRVPDRVITPRSQDFNAWYLDIIANAELADYGPVRGTMDYLNVKFKETGHSNMYFPQGKAAYNTPNGGTPSRTLLYSLLLIEKEASHVEGFSPELAVVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAKQMIDIYTRFAFEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFPVPLKTGLMLLQNTKYFIPVDFSKCMLVQFTDENGQRGYIWQTSWAVSTRFVGGIIMVHGDDAGLMLPPKIAPIQVVIVPIWKKDDEKMEVLSAALSVKEALQSSGVKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVLESLWSLHFGDVSTYEDLKSAISQGKWARGPWSASDEDELKVKEETGATIRCFPFEQPQGIKRCLMTGDPAEEVAIFAKSY*