Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024820.01.T01 | XP_003611736.1 | 88.177 | 406 | 10 | 3 | 1 | 370 | 1 | 404 | 0 | 688 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024820.01.T01 | G7K6N7 | 88.177 | 406 | 10 | 3 | 1 | 370 | 1 | 404 | 0.0 | 688 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047989.01 | MsG0580024820.01 | 0.806381 | 8.457504e-50 | 4.583727e-47 |
| MsG0080048969.01 | MsG0580024820.01 | 0.829709 | 4.423991e-55 | 4.564191e-52 |
| MsG0080049016.01 | MsG0580024820.01 | 0.804286 | 2.323080e-49 | 1.193123e-46 |
| MsG0180000017.01 | MsG0580024820.01 | 0.836057 | 1.169235e-56 | 1.456725e-53 |
| MsG0180000272.01 | MsG0580024820.01 | 0.834945 | 2.235184e-56 | 2.693273e-53 |
| MsG0180000489.01 | MsG0580024820.01 | 0.850859 | 1.292643e-60 | 2.567294e-57 |
| MsG0180000490.01 | MsG0580024820.01 | 0.839024 | 2.029401e-57 | 2.767111e-54 |
| MsG0180000491.01 | MsG0580024820.01 | 0.856837 | 2.455766e-62 | 5.938164e-59 |
| MsG0180001091.01 | MsG0580024820.01 | 0.811898 | 5.560902e-51 | 3.484276e-48 |
| MsG0180001523.01 | MsG0580024820.01 | 0.814233 | 1.710126e-51 | 1.141126e-48 |
| MsG0180001907.01 | MsG0580024820.01 | 0.830675 | 2.569307e-55 | 2.726014e-52 |
| MsG0180002891.01 | MsG0580024820.01 | 0.895853 | 6.455460e-76 | 6.810682e-72 |
| MsG0180003268.01 | MsG0580024820.01 | 0.802950 | 4.398325e-49 | 2.182754e-46 |
| MsG0180004106.01 | MsG0580024820.01 | 0.808055 | 3.738180e-50 | 2.115860e-47 |
| MsG0180004164.01 | MsG0580024820.01 | 0.811373 | 7.231181e-51 | 4.468498e-48 |
| MsG0180004277.01 | MsG0580024820.01 | 0.812887 | 3.382105e-51 | 2.175938e-48 |
| MsG0180004782.01 | MsG0580024820.01 | 0.801137 | 1.037624e-48 | 4.918068e-46 |
| MsG0180004988.01 | MsG0580024820.01 | 0.831212 | 1.897300e-55 | 2.045065e-52 |
| MsG0180005051.01 | MsG0580024820.01 | 0.817306 | 3.531315e-52 | 2.562332e-49 |
| MsG0180005283.01 | MsG0580024820.01 | 0.806859 | 6.702104e-50 | 3.677380e-47 |
| MsG0180005416.01 | MsG0580024820.01 | 0.831700 | 1.439000e-55 | 1.573852e-52 |
| MsG0180005803.01 | MsG0580024820.01 | 0.830905 | 2.256354e-55 | 2.410310e-52 |
| MsG0180005806.01 | MsG0580024820.01 | 0.833774 | 4.396310e-56 | 5.114242e-53 |
| MsG0180005854.01 | MsG0580024820.01 | 0.803892 | 2.805656e-49 | 1.426555e-46 |
| MsG0180005969.01 | MsG0580024820.01 | 0.808519 | 2.976289e-50 | 1.705395e-47 |
| MsG0180005991.01 | MsG0580024820.01 | 0.856228 | 3.706876e-62 | 8.785635e-59 |
| MsG0180006239.01 | MsG0580024820.01 | 0.803735 | 3.024545e-49 | 1.531589e-46 |
| MsG0280010584.01 | MsG0580024820.01 | 0.849376 | 3.365873e-60 | 6.368319e-57 |
| MsG0280010611.01 | MsG0580024820.01 | 0.809683 | 1.675994e-50 | 9.904885e-48 |
| MsG0280010675.01 | MsG0580024820.01 | 0.821523 | 3.860029e-53 | 3.147672e-50 |
| MsG0280010899.01 | MsG0580024820.01 | 0.814598 | 1.419939e-51 | 9.569093e-49 |
| MsG0280010905.01 | MsG0580024820.01 | 0.816473 | 5.431616e-52 | 3.852293e-49 |
| MsG0280011110.01 | MsG0580024820.01 | -0.840873 | 6.689118e-58 | 9.657747e-55 |
| MsG0280011222.01 | MsG0580024820.01 | 0.811297 | 7.513656e-51 | 4.633455e-48 |
| MsG0280011309.01 | MsG0580024820.01 | 0.800396 | 1.469687e-48 | 6.836083e-46 |
| MsG0380011662.01 | MsG0580024820.01 | 0.811741 | 6.015596e-51 | 3.753577e-48 |
| MsG0380012251.01 | MsG0580024820.01 | 0.802683 | 4.993052e-49 | 2.461176e-46 |
| MsG0380012931.01 | MsG0580024820.01 | 0.824348 | 8.473750e-54 | 7.486022e-51 |
| MsG0380013177.01 | MsG0580024820.01 | 0.839010 | 2.046536e-57 | 2.789317e-54 |
| MsG0380013373.01 | MsG0580024820.01 | 0.803873 | 2.831516e-49 | 1.438983e-46 |
| MsG0380013687.01 | MsG0580024820.01 | 0.849520 | 3.068349e-60 | 5.831900e-57 |
| MsG0380014144.01 | MsG0580024820.01 | 0.806996 | 6.269568e-50 | 3.452139e-47 |
| MsG0380014411.01 | MsG0580024820.01 | 0.807221 | 5.619082e-50 | 3.112179e-47 |
| MsG0380014517.01 | MsG0580024820.01 | 0.804811 | 1.805402e-49 | 9.399510e-47 |
| MsG0380014530.01 | MsG0580024820.01 | 0.837557 | 4.845525e-57 | 6.317282e-54 |
| MsG0380014794.01 | MsG0580024820.01 | 0.856645 | 2.796803e-62 | 6.720595e-59 |
| MsG0480018910.01 | MsG0580024820.01 | 0.873771 | 1.135982e-67 | 4.988963e-64 |
| MsG0480019065.01 | MsG0580024820.01 | 0.819428 | 1.167669e-52 | 8.982994e-50 |
| MsG0480019693.01 | MsG0580024820.01 | 0.845625 | 3.613128e-59 | 6.057395e-56 |
| MsG0480019974.01 | MsG0580024820.01 | 0.838545 | 2.697851e-57 | 3.625374e-54 |
| MsG0480020229.01 | MsG0580024820.01 | 0.824526 | 7.697743e-54 | 6.835681e-51 |
| MsG0480020433.01 | MsG0580024820.01 | 0.817540 | 3.127648e-52 | 2.284141e-49 |
| MsG0480020704.01 | MsG0580024820.01 | 0.801297 | 9.623016e-49 | 4.579398e-46 |
| MsG0480021060.01 | MsG0580024820.01 | 0.819575 | 1.080778e-52 | 8.349120e-50 |
| MsG0480021109.01 | MsG0580024820.01 | 0.835462 | 1.655009e-56 | 2.025252e-53 |
| MsG0480021111.01 | MsG0580024820.01 | 0.829819 | 4.157340e-55 | 4.303431e-52 |
| MsG0480021597.01 | MsG0580024820.01 | 0.805700 | 1.176082e-49 | 6.264562e-47 |
| MsG0480021892.01 | MsG0580024820.01 | 0.866509 | 2.706080e-65 | 9.143294e-62 |
| MsG0480021999.01 | MsG0580024820.01 | 0.879648 | 1.049786e-69 | 5.736833e-66 |
| MsG0480022002.01 | MsG0580024820.01 | 0.813878 | 2.048272e-51 | 1.353686e-48 |
| MsG0480022150.01 | MsG0580024820.01 | 0.809619 | 1.730306e-50 | 1.020889e-47 |
| MsG0480022617.01 | MsG0580024820.01 | 0.817440 | 3.294024e-52 | 2.399077e-49 |
| MsG0480022664.01 | MsG0580024820.01 | 0.818387 | 2.013385e-52 | 1.505062e-49 |
| MsG0480022935.01 | MsG0580024820.01 | 0.819111 | 1.378860e-52 | 1.051495e-49 |
| MsG0480023166.01 | MsG0580024820.01 | 0.815640 | 8.333152e-52 | 5.777596e-49 |
| MsG0480023498.01 | MsG0580024820.01 | 0.822509 | 2.280783e-53 | 1.912933e-50 |
| MsG0480023616.01 | MsG0580024820.01 | 0.819691 | 1.016637e-52 | 7.878656e-50 |
| MsG0480023740.01 | MsG0580024820.01 | 0.815442 | 9.225838e-52 | 6.361640e-49 |
| MsG0480023752.01 | MsG0580024820.01 | 0.828251 | 9.972603e-55 | 9.858241e-52 |
| MsG0480023821.01 | MsG0580024820.01 | 0.801027 | 1.092879e-48 | 5.165679e-46 |
| MsG0480023998.01 | MsG0580024820.01 | 0.881781 | 1.803566e-70 | 1.070636e-66 |
| MsG0580024386.01 | MsG0580024820.01 | 0.824401 | 8.234651e-54 | 7.285729e-51 |
| MsG0580024404.01 | MsG0580024820.01 | 0.858692 | 6.920250e-63 | 1.781335e-59 |
| MsG0580024665.01 | MsG0580024820.01 | 0.822120 | 2.807942e-53 | 2.328904e-50 |
| MsG0580024666.01 | MsG0580024820.01 | 0.803827 | 2.894944e-49 | 1.469403e-46 |
| MsG0580024759.01 | MsG0580024820.01 | 0.802896 | 4.512673e-49 | 2.236523e-46 |
| MsG0580024763.01 | MsG0580024820.01 | 0.839934 | 1.177280e-57 | 1.650937e-54 |
| MsG0580024766.01 | MsG0580024820.01 | 0.838340 | 3.048867e-57 | 4.071181e-54 |
| MsG0580024768.01 | MsG0580024820.01 | 0.805808 | 1.116341e-49 | 5.962584e-47 |
| MsG0580024820.01 | MsG0580025301.01 | 0.812381 | 4.362375e-51 | 2.769476e-48 |
| MsG0580024820.01 | MsG0580025827.01 | 0.802580 | 5.244435e-49 | 2.578231e-46 |
| MsG0580024820.01 | MsG0580026050.01 | 0.858392 | 8.500903e-63 | 2.166268e-59 |
| MsG0580024820.01 | MsG0580026271.01 | 0.800025 | 1.748625e-48 | 8.057160e-46 |
| MsG0580024820.01 | MsG0580026291.01 | 0.821890 | 3.173451e-53 | 2.615055e-50 |
| MsG0580024820.01 | MsG0580027331.01 | 0.811266 | 7.628580e-51 | 4.700697e-48 |
| MsG0580024820.01 | MsG0580028092.01 | 0.811632 | 6.352943e-51 | 3.952483e-48 |
| MsG0580024820.01 | MsG0580028093.01 | 0.837982 | 3.769505e-57 | 4.979574e-54 |
| MsG0580024820.01 | MsG0580028177.01 | 0.807727 | 4.387830e-50 | 2.462438e-47 |
| MsG0580024820.01 | MsG0580028397.01 | 0.813817 | 2.111906e-51 | 1.393438e-48 |
| MsG0580024820.01 | MsG0580028398.01 | 0.800896 | 1.162155e-48 | 5.474845e-46 |
| MsG0580024820.01 | MsG0580028719.01 | 0.821331 | 4.272968e-53 | 3.466081e-50 |
| MsG0580024820.01 | MsG0580029276.01 | 0.833531 | 5.056359e-56 | 5.839254e-53 |
| MsG0580024820.01 | MsG0580029394.01 | 0.820995 | 5.109131e-53 | 4.106025e-50 |
| MsG0580024820.01 | MsG0580029396.01 | 0.803365 | 3.609277e-49 | 1.810274e-46 |
| MsG0580024820.01 | MsG0580029399.01 | 0.801223 | 9.965739e-49 | 4.733527e-46 |
| MsG0580024820.01 | MsG0580030063.01 | 0.840522 | 8.268542e-58 | 1.180891e-54 |
| MsG0580024820.01 | MsG0680030599.01 | 0.805354 | 1.390286e-49 | 7.339511e-47 |
| MsG0580024820.01 | MsG0680030680.01 | 0.820385 | 7.053843e-53 | 5.573489e-50 |
| MsG0580024820.01 | MsG0680030902.01 | 0.807000 | 6.257059e-50 | 3.445631e-47 |
| MsG0580024820.01 | MsG0680031996.01 | 0.830810 | 2.380683e-55 | 2.535927e-52 |
| MsG0580024820.01 | MsG0680031997.01 | 0.817109 | 3.911002e-52 | 2.822567e-49 |
| MsG0580024820.01 | MsG0680032000.01 | 0.843425 | 1.412781e-58 | 2.209556e-55 |
| MsG0580024820.01 | MsG0680032002.01 | 0.837616 | 4.680381e-57 | 6.113431e-54 |
| MsG0580024820.01 | MsG0680032003.01 | 0.830385 | 3.025039e-55 | 3.182306e-52 |
| MsG0580024820.01 | MsG0680033049.01 | 0.827072 | 1.914671e-54 | 1.828769e-51 |
| MsG0580024820.01 | MsG0680035322.01 | 0.814330 | 1.627974e-51 | 1.089179e-48 |
| MsG0580024820.01 | MsG0680035612.01 | 0.829381 | 5.313142e-55 | 5.429396e-52 |
| MsG0580024820.01 | MsG0680035831.01 | 0.822775 | 1.977523e-53 | 1.671189e-50 |
| MsG0580024820.01 | MsG0780036509.01 | 0.815207 | 1.040453e-51 | 7.127574e-49 |
| MsG0580024820.01 | MsG0780036584.01 | 0.885790 | 6.001498e-72 | 4.176759e-68 |
| MsG0580024820.01 | MsG0780036620.01 | 0.801071 | 1.070220e-48 | 5.064154e-46 |
| MsG0580024820.01 | MsG0780038334.01 | 0.848317 | 6.618183e-60 | 1.209803e-56 |
| MsG0580024820.01 | MsG0780038337.01 | 0.817907 | 2.584643e-52 | 1.906575e-49 |
| MsG0580024820.01 | MsG0780038381.01 | 0.817650 | 2.953554e-52 | 2.163439e-49 |
| MsG0580024820.01 | MsG0780038417.01 | 0.812299 | 4.545843e-51 | 2.879591e-48 |
| MsG0580024820.01 | MsG0780039179.01 | 0.842209 | 2.974425e-58 | 4.477189e-55 |
| MsG0580024820.01 | MsG0780039256.01 | 0.870418 | 1.481733e-66 | 5.759785e-63 |
| MsG0580024820.01 | MsG0780039339.01 | 0.839813 | 1.265661e-57 | 1.768154e-54 |
| MsG0580024820.01 | MsG0780039795.01 | 0.846840 | 1.687152e-59 | 2.941860e-56 |
| MsG0580024820.01 | MsG0780039805.01 | 0.810660 | 1.032241e-50 | 6.259273e-48 |
| MsG0580024820.01 | MsG0780040080.01 | 0.823580 | 1.282985e-53 | 1.109141e-50 |
| MsG0580024820.01 | MsG0780040154.01 | 0.802919 | 4.464415e-49 | 2.213865e-46 |
| MsG0580024820.01 | MsG0780040155.01 | 0.813548 | 2.420386e-51 | 1.585416e-48 |
| MsG0580024820.01 | MsG0780040175.01 | 0.807230 | 5.593935e-50 | 3.098988e-47 |
| MsG0580024820.01 | MsG0780040278.01 | 0.815310 | 9.869568e-52 | 6.780748e-49 |
| MsG0580024820.01 | MsG0780040319.01 | 0.821047 | 4.969270e-53 | 3.999519e-50 |
| MsG0580024820.01 | MsG0780040701.01 | 0.827355 | 1.638078e-54 | 1.577784e-51 |
| MsG0580024820.01 | MsG0780040895.01 | 0.880583 | 4.871014e-70 | 2.761520e-66 |
| MsG0580024820.01 | MsG0780041002.01 | 0.804688 | 1.915678e-49 | 9.941409e-47 |
| MsG0580024820.01 | MsG0780041129.01 | 0.808108 | 3.642484e-50 | 2.064603e-47 |
| MsG0580024820.01 | MsG0780041218.01 | 0.802140 | 6.460716e-49 | 3.140795e-46 |
| MsG0580024820.01 | MsG0780041272.01 | 0.828999 | 6.576754e-55 | 6.644214e-52 |
| MsG0580024820.01 | MsG0780041588.01 | 0.835687 | 1.451350e-56 | 1.788229e-53 |
| MsG0580024820.01 | MsG0780041668.01 | 0.813429 | 2.571632e-51 | 1.678960e-48 |
| MsG0580024820.01 | MsG0780041778.01 | 0.808117 | 3.625561e-50 | 2.055601e-47 |
| MsG0580024820.01 | MsG0880041850.01 | 0.809598 | 1.747871e-50 | 1.030664e-47 |
| MsG0580024820.01 | MsG0880042021.01 | 0.806521 | 7.899995e-50 | 4.297012e-47 |
| MsG0580024820.01 | MsG0880042256.01 | 0.812483 | 4.143984e-51 | 2.638092e-48 |
| MsG0580024820.01 | MsG0880042988.01 | 0.814774 | 1.298406e-51 | 8.791108e-49 |
| MsG0580024820.01 | MsG0880043009.01 | 0.801741 | 7.803914e-49 | 3.755353e-46 |
| MsG0580024820.01 | MsG0880043107.01 | 0.824018 | 1.012837e-53 | 8.864304e-51 |
| MsG0580024820.01 | MsG0880043156.01 | 0.835537 | 1.583802e-56 | 1.942420e-53 |
| MsG0580024820.01 | MsG0880043235.01 | 0.806838 | 6.773551e-50 | 3.714484e-47 |
| MsG0580024820.01 | MsG0880043913.01 | 0.819114 | 1.376587e-52 | 1.049848e-49 |
| MsG0580024820.01 | MsG0880044333.01 | 0.826396 | 2.775875e-54 | 2.600182e-51 |
| MsG0580024820.01 | MsG0880044410.01 | 0.875952 | 2.052895e-68 | 9.774239e-65 |
| MsG0580024820.01 | MsG0880044435.01 | 0.853465 | 2.347295e-61 | 5.076577e-58 |
| MsG0580024820.01 | MsG0880044538.01 | 0.824311 | 8.644108e-54 | 7.628225e-51 |
| MsG0580024820.01 | MsG0880044558.01 | 0.805550 | 1.264388e-49 | 6.708409e-47 |
| MsG0580024820.01 | MsG0880045259.01 | 0.802745 | 4.848203e-49 | 2.393615e-46 |
| MsG0580024820.01 | MsG0880045377.01 | 0.821668 | 3.572281e-53 | 2.925110e-50 |
| MsG0580024820.01 | MsG0880045409.01 | 0.811149 | 8.087761e-51 | 4.968331e-48 |
| MsG0580024820.01 | MsG0880045423.01 | 0.846554 | 2.019211e-59 | 3.488556e-56 |
| MsG0580024820.01 | MsG0880045624.01 | 0.809210 | 2.117514e-50 | 1.235761e-47 |
| MsG0580024820.01 | MsG0880045668.01 | 0.826329 | 2.880145e-54 | 2.692633e-51 |
| MsG0580024820.01 | MsG0880045771.01 | 0.801992 | 6.929608e-49 | 3.356043e-46 |
| MsG0580024820.01 | MsG0880045899.01 | 0.836863 | 7.290307e-57 | 9.305876e-54 |
| MsG0580024820.01 | MsG0880045923.01 | 0.884539 | 1.759138e-71 | 1.165026e-67 |
| MsG0580024820.01 | MsG0880046025.01 | 0.804265 | 2.346680e-49 | 1.204576e-46 |
| MsG0580024820.01 | MsG0880046347.01 | 0.816825 | 4.529298e-52 | 3.243516e-49 |
| MsG0580024820.01 | MsG0880046406.01 | 0.836342 | 9.900636e-57 | 1.244212e-53 |
| MsG0580024820.01 | MsG0880046540.01 | 0.802242 | 6.155875e-49 | 3.000462e-46 |
| MsG0580024820.01 | MsG0880046573.01 | 0.815480 | 9.048955e-52 | 6.246461e-49 |
| MsG0580024820.01 | MsG0880046574.01 | 0.824572 | 7.507120e-54 | 6.675683e-51 |
| MsG0580024820.01 | MsG0880046968.01 | 0.818954 | 1.497164e-52 | 1.136867e-49 |
| MsG0580024820.01 | MsG0880046969.01 | 0.839502 | 1.525261e-57 | 2.110480e-54 |
| MsG0580024820.01 | MsG0880047111.01 | 0.823591 | 1.275353e-53 | 1.102896e-50 |
| MsG0580024820.01 | MsG0880047112.01 | 0.859712 | 3.421599e-63 | 9.121699e-60 |
| MsG0580024820.01 | MsG0880047540.01 | 0.801269 | 9.752407e-49 | 4.637580e-46 |
| MsG0580024820.01 | MsG0880047660.01 | 0.812820 | 3.497210e-51 | 2.245884e-48 |
| MsG0580024820.01 | MsG0880047740.01 | 0.816747 | 4.714177e-52 | 3.368740e-49 |
| MsG0380015486.01 | MsG0580024820.01 | 0.841392 | 4.884813e-58 | 7.167729e-55 |
| MsG0380015501.01 | MsG0580024820.01 | 0.827975 | 1.162511e-54 | 1.140057e-51 |
| MsG0380016074.01 | MsG0580024820.01 | 0.819822 | 9.493440e-53 | 7.384213e-50 |
| MsG0380016151.01 | MsG0580024820.01 | 0.854755 | 9.963123e-62 | 2.248479e-58 |
| MsG0380016176.01 | MsG0580024820.01 | -0.816748 | 4.712644e-52 | 3.367733e-49 |
| MsG0380016317.01 | MsG0580024820.01 | 0.825814 | 3.818617e-54 | 3.518231e-51 |
| MsG0380016542.01 | MsG0580024820.01 | 0.811058 | 8.465258e-51 | 5.187931e-48 |
| MsG0380016545.01 | MsG0580024820.01 | 0.821085 | 4.871009e-53 | 3.924332e-50 |
| MsG0380017056.01 | MsG0580024820.01 | 0.843106 | 1.718201e-58 | 2.660036e-55 |
| MsG0380017253.01 | MsG0580024820.01 | -0.896190 | 4.677893e-76 | 5.006313e-72 |
| MsG0380017353.01 | MsG0580024820.01 | 0.850590 | 1.538784e-60 | 3.029166e-57 |
| MsG0480018100.01 | MsG0580024820.01 | 0.812517 | 4.073266e-51 | 2.595367e-48 |
| MsG0480018232.01 | MsG0580024820.01 | 0.895159 | 1.249120e-75 | 1.280650e-71 |
| MsG0480018323.01 | MsG0580024820.01 | 0.845863 | 3.114595e-59 | 5.262773e-56 |
| MsG0480018324.01 | MsG0580024820.01 | 0.824846 | 6.470162e-54 | 5.798947e-51 |
| MsG0280006587.01 | MsG0580024820.01 | 0.848393 | 6.308612e-60 | 1.156043e-56 |
| MsG0280006989.01 | MsG0580024820.01 | 0.814837 | 1.256894e-51 | 8.524859e-49 |
| MsG0280008233.01 | MsG0580024820.01 | 0.820221 | 7.692512e-53 | 6.050081e-50 |
| MsG0280008309.01 | MsG0580024820.01 | 0.804990 | 1.656614e-49 | 8.664165e-47 |
| MsG0280008531.01 | MsG0580024820.01 | 0.862395 | 5.225803e-64 | 1.528065e-60 |
| MsG0280008533.01 | MsG0580024820.01 | 0.824583 | 7.461419e-54 | 6.637258e-51 |
| MsG0280008939.01 | MsG0580024820.01 | 0.842663 | 2.253443e-58 | 3.440604e-55 |
| MsG0280008966.01 | MsG0580024820.01 | 0.838207 | 3.299085e-57 | 4.387598e-54 |
| MsG0280009171.01 | MsG0580024820.01 | 0.806575 | 7.695112e-50 | 4.191305e-47 |
| MsG0280009434.01 | MsG0580024820.01 | 0.850598 | 1.530652e-60 | 3.013945e-57 |
| MsG0280009869.01 | MsG0580024820.01 | 0.815533 | 8.806284e-52 | 6.087422e-49 |
| MsG0280009960.01 | MsG0580024820.01 | 0.814960 | 1.180579e-51 | 8.033821e-49 |
| MsG0280010523.01 | MsG0580024820.01 | 0.826899 | 2.105230e-54 | 2.000737e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024820.01.T01 | MTR_5g017290 | 88.177 | 406 | 10 | 3 | 1 | 370 | 1 | 404 | 0.0 | 688 |
| MsG0580024820.01.T01 | MTR_1g019280 | 38.903 | 401 | 187 | 16 | 14 | 369 | 170 | 557 | 4.36e-57 | 195 |
| MsG0580024820.01.T01 | MTR_1g019280 | 38.903 | 401 | 187 | 16 | 14 | 369 | 232 | 619 | 1.01e-56 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024820.01.T01 | AT1G45207 | 36.000 | 400 | 204 | 13 | 1 | 369 | 170 | 548 | 7.01e-57 | 194 |
| MsG0580024820.01.T01 | AT1G45207 | 35.556 | 405 | 204 | 14 | 1 | 369 | 171 | 554 | 1.60e-54 | 188 |
| MsG0580024820.01.T01 | AT4G36970 | 35.499 | 431 | 203 | 21 | 1 | 369 | 1 | 418 | 1.09e-37 | 140 |
Find 80 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGGACAATACCTTCTAAA+TGG | 0.237584 | 5:-10279666 | MsG0580024820.01.T01:CDS |
| CTGATATTGCTGCTTGTTGT+TGG | 0.268841 | 5:+10279730 | None:intergenic |
| TGTAGTCCAGTTTCTTCTTC+AGG | 0.280909 | 5:-10279622 | MsG0580024820.01.T01:CDS |
| TCTCTGAGTTCCACCCCTTT+TGG | 0.282160 | 5:+10279767 | None:intergenic |
| TTTAGAAGTTGGGAGATAAA+AGG | 0.298059 | 5:+10277862 | None:intergenic |
| TCTCTGTAGTTTGGTTCCTT+TGG | 0.307911 | 5:+10279805 | None:intergenic |
| ATCTAAATTTCTTATCATAT+TGG | 0.340386 | 5:-10279935 | MsG0580024820.01.T01:five_prime_UTR |
| TGAAAATACTTTCCAAGTCT+TGG | 0.346095 | 5:+10278197 | None:intergenic |
| GGTACAGAAGCCCAAGCTTC+AGG | 0.348971 | 5:-10278754 | MsG0580024820.01.T01:CDS |
| GCCAACACACCAGTTGTAAA+AGG | 0.362730 | 5:+10279463 | None:intergenic |
| GTTGTTCCTTGTGGCACAAT+TGG | 0.366877 | 5:+10279559 | None:intergenic |
| TATCCACATGACAATTTGTA+TGG | 0.371024 | 5:-10279412 | MsG0580024820.01.T01:CDS |
| AACTTCATACCATGGGAATT+AGG | 0.371290 | 5:+10279277 | None:intergenic |
| TCACCAAATATGGCAAAATA+TGG | 0.373430 | 5:-10278173 | MsG0580024820.01.T01:CDS |
| TTCAATTCATAGGCCCTACT+TGG | 0.382267 | 5:-10278036 | MsG0580024820.01.T01:three_prime_UTR |
| AAATGCAATGTTCACTATCT+AGG | 0.385709 | 5:+10277986 | None:intergenic |
| AACCTTAACACCAGTTCAAC+AGG | 0.395348 | 5:-10278232 | MsG0580024820.01.T01:CDS |
| CTCCTGTTGAACTGGTGTTA+AGG | 0.398242 | 5:+10278230 | None:intergenic |
| CTGTGTCGAACGCGCCTTCG+TGG | 0.408576 | 5:-10279327 | MsG0580024820.01.T01:CDS |
| ACATAGCCTGAAGAAGAAAC+TGG | 0.409259 | 5:+10279616 | None:intergenic |
| TATTGTCCTTCCACTGTTGA+AGG | 0.414027 | 5:+10279678 | None:intergenic |
| AAGTGTTTGACAGATGAAAT+TGG | 0.415236 | 5:-10278331 | MsG0580024820.01.T01:intron |
| AGTTTGGTTCCTTTGGACTT+AGG | 0.416458 | 5:+10279812 | None:intergenic |
| ACATGCTGCTCCTGTTGAAC+TGG | 0.418177 | 5:+10278222 | None:intergenic |
| TGTTGAAGAGAAACAATATC+TGG | 0.419812 | 5:+10279439 | None:intergenic |
| TTATCTAACATACTTGGAAC+TGG | 0.427894 | 5:+10278699 | None:intergenic |
| AGCAGCATGTTTCCAAGACT+TGG | 0.435400 | 5:-10278209 | MsG0580024820.01.T01:CDS |
| TCTGCATCATCCCATTTAGA+AGG | 0.438875 | 5:+10279655 | None:intergenic |
| ATTGTCATATTTCAATTCAT+AGG | 0.439553 | 5:-10278046 | MsG0580024820.01.T01:three_prime_UTR |
| AGAAGCCCAAGCTTCAGGTT+TGG | 0.453435 | 5:-10278749 | MsG0580024820.01.T01:CDS |
| TGTTGCTTGTATCAAAAGTC+AGG | 0.456167 | 5:-10277901 | MsG0580024820.01.T01:three_prime_UTR |
| GATTCCACTGCGAAATGGTC+TGG | 0.462347 | 5:-10279512 | MsG0580024820.01.T01:CDS |
| CAATATCCAAACCTGAAGCT+TGG | 0.467995 | 5:+10278743 | None:intergenic |
| CCTACGATTCCACTGCGAAA+TGG | 0.470886 | 5:-10279517 | MsG0580024820.01.T01:CDS |
| ACCATTGAAAGAGCTTAGCT+TGG | 0.475821 | 5:+10278795 | None:intergenic |
| AAAGAAGAAATCGTCATCAA+TGG | 0.476995 | 5:-10278307 | MsG0580024820.01.T01:CDS |
| TAGCTTGGATGCATAACTCT+TGG | 0.477663 | 5:+10278810 | None:intergenic |
| AATATCCAAACCTGAAGCTT+GGG | 0.478511 | 5:+10278744 | None:intergenic |
| GTTAGAGATCAAAGATGTGC+AGG | 0.480685 | 5:-10278863 | MsG0580024820.01.T01:CDS |
| AAGGACAATACCTTCTAAAT+GGG | 0.483996 | 5:-10279665 | MsG0580024820.01.T01:CDS |
| TGGCTTGCAAAGCAGCTGCT+TGG | 0.488792 | 5:+10278147 | None:intergenic |
| AGTTCAGTGGTTAATGAGAA+TGG | 0.504775 | 5:-10279364 | MsG0580024820.01.T01:CDS |
| GGGTGAAACGCCAGCTACAT+AGG | 0.507328 | 5:+10279699 | None:intergenic |
| GTCAAGCTAATGTTATTAAG+TGG | 0.521945 | 5:-10278834 | MsG0580024820.01.T01:CDS |
| GGCGTTTCACCCTTCAACAG+TGG | 0.525088 | 5:-10279688 | MsG0580024820.01.T01:CDS |
| ATGAAGCTAAAATCATTGCA+TGG | 0.527368 | 5:-10278571 | MsG0580024820.01.T01:CDS |
| GGTAAAGAGTTGAAGAAAAG+TGG | 0.529522 | 5:-10278775 | MsG0580024820.01.T01:CDS |
| AGAAGACAAGCCTATGTAGC+TGG | 0.554075 | 5:-10279709 | MsG0580024820.01.T01:CDS |
| CCATGGGAATTAGGCGAAGA+CGG | 0.554746 | 5:+10279286 | None:intergenic |
| TTTACAGATGAGAAATGTGA+TGG | 0.559064 | 5:-10279031 | MsG0580024820.01.T01:intron |
| GCAGAAGGCTATTCCAAGTA+GGG | 0.562327 | 5:+10278023 | None:intergenic |
| ATACAAGCAACACGTGTGAA+AGG | 0.564835 | 5:+10277912 | None:intergenic |
| TCTGGTACCTCTCAGAAACT+AGG | 0.565236 | 5:-10279841 | MsG0580024820.01.T01:CDS |
| TCCAAGCTAAGCTCTTTCAA+TGG | 0.565430 | 5:-10278796 | MsG0580024820.01.T01:CDS |
| GTATAAATGTAAAGTGCAGA+AGG | 0.566880 | 5:+10278008 | None:intergenic |
| AATGGGATGATGCAGAGAGA+TGG | 0.567472 | 5:-10279648 | MsG0580024820.01.T01:CDS |
| GTCACATAGTGTTTCTCAAG+AGG | 0.574885 | 5:-10279910 | MsG0580024820.01.T01:five_prime_UTR |
| ATTGTCCTTCCACTGTTGAA+GGG | 0.580321 | 5:+10279679 | None:intergenic |
| CCGTCTTCGCCTAATTCCCA+TGG | 0.580829 | 5:-10279286 | MsG0580024820.01.T01:intron |
| TCACATAGTGTTTCTCAAGA+GGG | 0.581172 | 5:-10279909 | MsG0580024820.01.T01:five_prime_UTR |
| TTTCACCCTTCAACAGTGGA+AGG | 0.582839 | 5:-10279684 | MsG0580024820.01.T01:CDS |
| ATGAGATTGATCACGGAACA+TGG | 0.590432 | 5:+10278127 | None:intergenic |
| TGAAGCTAAAATCATTGCAT+GGG | 0.598593 | 5:-10278570 | MsG0580024820.01.T01:CDS |
| TGCAGAAGGCTATTCCAAGT+AGG | 0.600471 | 5:+10278022 | None:intergenic |
| CCATTTCGCAGTGGAATCGT+AGG | 0.604007 | 5:+10279517 | None:intergenic |
| GAGTAGTAAGTTGTTCCTTG+TGG | 0.607210 | 5:+10279550 | None:intergenic |
| AGCTGCAATTAGAAAACTTG+AGG | 0.609648 | 5:-10278522 | MsG0580024820.01.T01:intron |
| CATTGATGATAATAGTTCAG+TGG | 0.616824 | 5:-10279377 | MsG0580024820.01.T01:CDS |
| AAAACATTGAAAACCAAAAG+GGG | 0.619520 | 5:-10279780 | MsG0580024820.01.T01:CDS |
| TGTGTATATGAGATTGATCA+CGG | 0.635634 | 5:+10278120 | None:intergenic |
| ACATTGAAAACCAAAAGGGG+TGG | 0.639810 | 5:-10279777 | MsG0580024820.01.T01:CDS |
| AGGTTCATTCCTAAGTCCAA+AGG | 0.641804 | 5:-10279821 | MsG0580024820.01.T01:CDS |
| GGACCATACAAATTGTCATG+TGG | 0.647753 | 5:+10279409 | None:intergenic |
| ACCACCAGACCATTTCGCAG+TGG | 0.650043 | 5:+10279508 | None:intergenic |
| TCCACTGCGAAATGGTCTGG+TGG | 0.659097 | 5:-10279509 | MsG0580024820.01.T01:CDS |
| AGTGGTCCAATTGTGCCACA+AGG | 0.667585 | 5:-10279565 | MsG0580024820.01.T01:CDS |
| GAATGAACCTAGTTTCTGAG+AGG | 0.673385 | 5:+10279834 | None:intergenic |
| TTATCATCAATGTCATAACG+TGG | 0.704902 | 5:+10279388 | None:intergenic |
| TTACAGATGAGAAATGTGAT+GGG | 0.707865 | 5:-10279030 | MsG0580024820.01.T01:intron |
| GAGAGAAGTTCTGACCACGA+AGG | 0.753003 | 5:+10279313 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAATTTCTTATCATAT+TGG | - | Chr5:10277879-10277898 | MsG0580024820.01.T01:three_prime_UTR | 15.0% |
| !! | AAAAAAAACTACAATGAACA+TGG | + | Chr5:10279722-10279741 | None:intergenic | 20.0% |
| !! | AAAAAAACTACAATGAACAT+GGG | + | Chr5:10279721-10279740 | None:intergenic | 20.0% |
| !! | AAAAAACATTGAAAACCAAA+AGG | - | Chr5:10278032-10278051 | MsG0580024820.01.T01:three_prime_UTR | 20.0% |
| !! | AAAAACATTGAAAACCAAAA+GGG | - | Chr5:10278033-10278052 | MsG0580024820.01.T01:three_prime_UTR | 20.0% |
| !! | AACAAAAATACTAAACGTTT+AGG | + | Chr5:10278765-10278784 | None:intergenic | 20.0% |
| !! | ACAAAAATACTAAACGTTTA+GGG | + | Chr5:10278764-10278783 | None:intergenic | 20.0% |
| !! | ATTGTCATATTTCAATTCAT+AGG | - | Chr5:10279768-10279787 | MsG0580024820.01.T01:CDS | 20.0% |
| !! | GTTAATATGAAAAAGAATTC+TGG | - | Chr5:10277955-10277974 | MsG0580024820.01.T01:three_prime_UTR | 20.0% |
| !! | TAAATACATAAACACAACAA+TGG | + | Chr5:10279184-10279203 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTTAGGTTTTTTC+AGG | - | Chr5:10279732-10279751 | MsG0580024820.01.T01:CDS | 20.0% |
| !!! | TGTTCATTGTAGTTTTTTTT+AGG | - | Chr5:10279722-10279741 | MsG0580024820.01.T01:CDS | 20.0% |
| ! | AAAAAACTACAATGAACATG+GGG | + | Chr5:10279720-10279739 | None:intergenic | 25.0% |
| ! | AAAACATTGAAAACCAAAAG+GGG | - | Chr5:10278034-10278053 | MsG0580024820.01.T01:three_prime_UTR | 25.0% |
| ! | CAAAAATACTAAACGTTTAG+GGG | + | Chr5:10278763-10278782 | None:intergenic | 25.0% |
| ! | CATCTATTATCTAACATACT+TGG | + | Chr5:10279124-10279143 | None:intergenic | 25.0% |
| ! | CCTATGTCAAAAATTGATAA+AGG | - | Chr5:10278825-10278844 | MsG0580024820.01.T01:CDS | 25.0% |
| ! | GTCAATGAATTAACTTTCAT+TGG | - | Chr5:10278629-10278648 | MsG0580024820.01.T01:intron | 25.0% |
| !! | CCTTTATCAATTTTTGACAT+AGG | + | Chr5:10278828-10278847 | None:intergenic | 25.0% |
| !! | GTATTTTCATTCACCAAATA+TGG | - | Chr5:10279631-10279650 | MsG0580024820.01.T01:CDS | 25.0% |
| !!! | ATGTTTTTTTCTCTGTAGTT+TGG | + | Chr5:10278021-10278040 | None:intergenic | 25.0% |
| !!! | TTTTTTCAGGTAAACACAAT+AGG | - | Chr5:10279745-10279764 | MsG0580024820.01.T01:CDS | 25.0% |
| AAAGAAGAAATCGTCATCAA+TGG | - | Chr5:10279507-10279526 | MsG0580024820.01.T01:CDS | 30.0% | |
| AAATGCAATGTTCACTATCT+AGG | + | Chr5:10279831-10279850 | None:intergenic | 30.0% | |
| AAGGACAATACCTTCTAAAT+GGG | - | Chr5:10278149-10278168 | MsG0580024820.01.T01:CDS | 30.0% | |
| AAGTGTTTGACAGATGAAAT+TGG | - | Chr5:10279483-10279502 | MsG0580024820.01.T01:CDS | 30.0% | |
| AGAAATCCCAAATCAAAAAG+TGG | - | Chr5:10278231-10278250 | MsG0580024820.01.T01:CDS | 30.0% | |
| ATGAAGCTAAAATCATTGCA+TGG | - | Chr5:10279243-10279262 | MsG0580024820.01.T01:intron | 30.0% | |
| GTATAAATGTAAAGTGCAGA+AGG | + | Chr5:10279809-10279828 | None:intergenic | 30.0% | |
| GTCAAGCTAATGTTATTAAG+TGG | - | Chr5:10278980-10278999 | MsG0580024820.01.T01:intron | 30.0% | |
| GTTCCTAATGAAATTGAGTT+GGG | + | Chr5:10279362-10279381 | None:intergenic | 30.0% | |
| TAACCCAACTCAATTTCATT+AGG | - | Chr5:10279356-10279375 | MsG0580024820.01.T01:CDS | 30.0% | |
| TATCCACATGACAATTTGTA+TGG | - | Chr5:10278402-10278421 | MsG0580024820.01.T01:intron | 30.0% | |
| TCACCAAATATGGCAAAATA+TGG | - | Chr5:10279641-10279660 | MsG0580024820.01.T01:CDS | 30.0% | |
| TGAAAATACTTTCCAAGTCT+TGG | + | Chr5:10279620-10279639 | None:intergenic | 30.0% | |
| TGAAGCTAAAATCATTGCAT+GGG | - | Chr5:10279244-10279263 | MsG0580024820.01.T01:intron | 30.0% | |
| TGTGTATATGAGATTGATCA+CGG | + | Chr5:10279697-10279716 | None:intergenic | 30.0% | |
| TGTTCCTAATGAAATTGAGT+TGG | + | Chr5:10279363-10279382 | None:intergenic | 30.0% | |
| TGTTGAAGAGAAACAATATC+TGG | + | Chr5:10278378-10278397 | None:intergenic | 30.0% | |
| TTACAGATGAGAAATGTGAT+GGG | - | Chr5:10278784-10278803 | MsG0580024820.01.T01:CDS | 30.0% | |
| TTATCATCAATGTCATAACG+TGG | + | Chr5:10278429-10278448 | None:intergenic | 30.0% | |
| TTATCTAACATACTTGGAAC+TGG | + | Chr5:10279118-10279137 | None:intergenic | 30.0% | |
| TTCATTGAGTCAACAAAAGA+GGG | - | Chr5:10279153-10279172 | MsG0580024820.01.T01:intron | 30.0% | |
| TTTACAGATGAGAAATGTGA+TGG | - | Chr5:10278783-10278802 | MsG0580024820.01.T01:CDS | 30.0% | |
| TTTCATTGAGTCAACAAAAG+AGG | - | Chr5:10279152-10279171 | MsG0580024820.01.T01:intron | 30.0% | |
| ! | AGACCATATTTTGCCATATT+TGG | + | Chr5:10279647-10279666 | None:intergenic | 30.0% |
| ! | CATTGATGATAATAGTTCAG+TGG | - | Chr5:10278437-10278456 | MsG0580024820.01.T01:intron | 30.0% |
| ! | TGATCTCTAACTTTTCTGAA+TGG | + | Chr5:10278942-10278961 | None:intergenic | 30.0% |
| !! | TAATGAAATTGAGTTGGGTT+AGG | + | Chr5:10279357-10279376 | None:intergenic | 30.0% |
| !!! | AATTGGACCACTTTTTGATT+TGG | + | Chr5:10278241-10278260 | None:intergenic | 30.0% |
| !!! | ATGAACTTTCATTTTGAAGC+AGG | - | Chr5:10279207-10279226 | MsG0580024820.01.T01:intron | 30.0% |
| !!! | ATTGGACCACTTTTTGATTT+GGG | + | Chr5:10278240-10278259 | None:intergenic | 30.0% |
| AACTTCATACCATGGGAATT+AGG | + | Chr5:10278540-10278559 | None:intergenic | 35.0% | |
| AAGACTAGAACTTCATACCA+TGG | + | Chr5:10278548-10278567 | None:intergenic | 35.0% | |
| AATATCCAAACCTGAAGCTT+GGG | + | Chr5:10279073-10279092 | None:intergenic | 35.0% | |
| AATTGGGGATGAAGAAGATT+TGG | + | Chr5:10278897-10278916 | None:intergenic | 35.0% | |
| AGACTAGAACTTCATACCAT+GGG | + | Chr5:10278547-10278566 | None:intergenic | 35.0% | |
| AGCTGCAATTAGAAAACTTG+AGG | - | Chr5:10279292-10279311 | MsG0580024820.01.T01:CDS | 35.0% | |
| AGTTCAGTGGTTAATGAGAA+TGG | - | Chr5:10278450-10278469 | MsG0580024820.01.T01:intron | 35.0% | |
| CTGAACTGAACATTCTTACA+TGG | - | Chr5:10279323-10279342 | MsG0580024820.01.T01:CDS | 35.0% | |
| GAAGAAGATTTGGAGATGAA+TGG | + | Chr5:10278887-10278906 | None:intergenic | 35.0% | |
| GAAGGACAATACCTTCTAAA+TGG | - | Chr5:10278148-10278167 | MsG0580024820.01.T01:CDS | 35.0% | |
| GGTAAAGAGTTGAAGAAAAG+TGG | - | Chr5:10279039-10279058 | MsG0580024820.01.T01:intron | 35.0% | |
| TCACATAGTGTTTCTCAAGA+GGG | - | Chr5:10277905-10277924 | MsG0580024820.01.T01:three_prime_UTR | 35.0% | |
| TGGAATCGTAGGTGAAAAAT+TGG | + | Chr5:10278289-10278308 | None:intergenic | 35.0% | |
| TGTCAAACACTTGCATAATC+AGG | + | Chr5:10279475-10279494 | None:intergenic | 35.0% | |
| TTGGATTCATGGCCAAAATT+GGG | + | Chr5:10278913-10278932 | None:intergenic | 35.0% | |
| TTTGGATTCATGGCCAAAAT+TGG | + | Chr5:10278914-10278933 | None:intergenic | 35.0% | |
| ! | AATGGCAACTTTTGGATTCA+TGG | + | Chr5:10278924-10278943 | None:intergenic | 35.0% |
| ! | ATCTTCTTCATCCCCAATTT+TGG | - | Chr5:10278898-10278917 | MsG0580024820.01.T01:intron | 35.0% |
| ! | ATGAGTTCTCCTTTTACAAC+TGG | - | Chr5:10278342-10278361 | MsG0580024820.01.T01:intron | 35.0% |
| ! | CTTTTCTGAATGGCAACTTT+TGG | + | Chr5:10278932-10278951 | None:intergenic | 35.0% |
| ! | TGTATTTTGCATCGTACATG+AGG | - | Chr5:10279867-10279886 | MsG0580024820.01.T01:exon | 35.0% |
| ! | TGTTGCTTGTATCAAAAGTC+AGG | - | Chr5:10279913-10279932 | MsG0580024820.01.T01:five_prime_UTR | 35.0% |
| AACCTTAACACCAGTTCAAC+AGG | - | Chr5:10279582-10279601 | MsG0580024820.01.T01:CDS | 40.0% | |
| ACATAGCCTGAAGAAGAAAC+TGG | + | Chr5:10278201-10278220 | None:intergenic | 40.0% | |
| ACATTGAAAACCAAAAGGGG+TGG | - | Chr5:10278037-10278056 | MsG0580024820.01.T01:three_prime_UTR | 40.0% | |
| ACCATTGAAAGAGCTTAGCT+TGG | + | Chr5:10279022-10279041 | None:intergenic | 40.0% | |
| AGGTTCATTCCTAAGTCCAA+AGG | - | Chr5:10277993-10278012 | MsG0580024820.01.T01:three_prime_UTR | 40.0% | |
| ATACAAGCAACACGTGTGAA+AGG | + | Chr5:10279905-10279924 | None:intergenic | 40.0% | |
| ATGAGATTGATCACGGAACA+TGG | + | Chr5:10279690-10279709 | None:intergenic | 40.0% | |
| ATTGTCCTTCCACTGTTGAA+GGG | + | Chr5:10278138-10278157 | None:intergenic | 40.0% | |
| CAATATCCAAACCTGAAGCT+TGG | + | Chr5:10279074-10279093 | None:intergenic | 40.0% | |
| GAATGAACCTAGTTTCTGAG+AGG | + | Chr5:10277983-10278002 | None:intergenic | 40.0% | |
| GAGTAGTAAGTTGTTCCTTG+TGG | + | Chr5:10278267-10278286 | None:intergenic | 40.0% | |
| GGACCATACAAATTGTCATG+TGG | + | Chr5:10278408-10278427 | None:intergenic | 40.0% | |
| GGAGAGTTTGCAAAAAGCAA+AGG | - | Chr5:10279265-10279284 | MsG0580024820.01.T01:intron | 40.0% | |
| GTCACATAGTGTTTCTCAAG+AGG | - | Chr5:10277904-10277923 | MsG0580024820.01.T01:three_prime_UTR | 40.0% | |
| GTTAGAGATCAAAGATGTGC+AGG | - | Chr5:10278951-10278970 | MsG0580024820.01.T01:intron | 40.0% | |
| TACTAAACGTTTAGGGGACT+TGG | + | Chr5:10278757-10278776 | None:intergenic | 40.0% | |
| TAGCTTGGATGCATAACTCT+TGG | + | Chr5:10279007-10279026 | None:intergenic | 40.0% | |
| TATTGTCCTTCCACTGTTGA+AGG | + | Chr5:10278139-10278158 | None:intergenic | 40.0% | |
| TCCAAGCTAAGCTCTTTCAA+TGG | - | Chr5:10279018-10279037 | MsG0580024820.01.T01:CDS | 40.0% | |
| TCTGCATCATCCCATTTAGA+AGG | + | Chr5:10278162-10278181 | None:intergenic | 40.0% | |
| TGGATTCATGGCCAAAATTG+GGG | + | Chr5:10278912-10278931 | None:intergenic | 40.0% | |
| TGTAGTCCAGTTTCTTCTTC+AGG | - | Chr5:10278192-10278211 | MsG0580024820.01.T01:CDS | 40.0% | |
| TTCAATTCATAGGCCCTACT+TGG | - | Chr5:10279778-10279797 | MsG0580024820.01.T01:CDS | 40.0% | |
| ! | AGTTTGGTTCCTTTGGACTT+AGG | + | Chr5:10278005-10278024 | None:intergenic | 40.0% |
| ! | GAAGTTCTAGTCTTCTCAGT+TGG | - | Chr5:10278554-10278573 | MsG0580024820.01.T01:CDS | 40.0% |
| ! | TCCTTTTACAACTGGTGTGT+TGG | - | Chr5:10278350-10278369 | MsG0580024820.01.T01:intron | 40.0% |
| ! | TCTCTGTAGTTTGGTTCCTT+TGG | + | Chr5:10278012-10278031 | None:intergenic | 40.0% |
| !! | CTGATATTGCTGCTTGTTGT+TGG | + | Chr5:10278087-10278106 | None:intergenic | 40.0% |
| AAAGACGCCTCTGCATTTGT+CGG | + | Chr5:10279442-10279461 | None:intergenic | 45.0% | |
| AATGGGATGATGCAGAGAGA+TGG | - | Chr5:10278166-10278185 | MsG0580024820.01.T01:CDS | 45.0% | |
| AGAAGACAAGCCTATGTAGC+TGG | - | Chr5:10278105-10278124 | MsG0580024820.01.T01:three_prime_UTR | 45.0% | |
| AGCAGCATGTTTCCAAGACT+TGG | - | Chr5:10279605-10279624 | MsG0580024820.01.T01:CDS | 45.0% | |
| CATTAGACCGACAAATGCAG+AGG | - | Chr5:10279432-10279451 | MsG0580024820.01.T01:CDS | 45.0% | |
| CTCTCCAGAGACTGAAAATG+AGG | - | Chr5:10278860-10278879 | MsG0580024820.01.T01:CDS | 45.0% | |
| GCAGAAGGCTATTCCAAGTA+GGG | + | Chr5:10279794-10279813 | None:intergenic | 45.0% | |
| GCCAACACACCAGTTGTAAA+AGG | + | Chr5:10278354-10278373 | None:intergenic | 45.0% | |
| GTTGTTCCTTGTGGCACAAT+TGG | + | Chr5:10278258-10278277 | None:intergenic | 45.0% | |
| TCTGGTACCTCTCAGAAACT+AGG | - | Chr5:10277973-10277992 | MsG0580024820.01.T01:three_prime_UTR | 45.0% | |
| TGCAGAAGGCTATTCCAAGT+AGG | + | Chr5:10279795-10279814 | None:intergenic | 45.0% | |
| TTGAACATCGAAGTCTGCTC+TGG | - | Chr5:10278711-10278730 | MsG0580024820.01.T01:intron | 45.0% | |
| TTTCACCCTTCAACAGTGGA+AGG | - | Chr5:10278130-10278149 | MsG0580024820.01.T01:exon | 45.0% | |
| ! | AGTCTCTGGAGAGCTCATTT+GGG | + | Chr5:10278853-10278872 | None:intergenic | 45.0% |
| ! | CTCCTGTTGAACTGGTGTTA+AGG | + | Chr5:10279587-10279606 | None:intergenic | 45.0% |
| ! | TGGTCCTCATTTTCAGTCTC+TGG | + | Chr5:10278867-10278886 | None:intergenic | 45.0% |
| ACATGCTGCTCCTGTTGAAC+TGG | + | Chr5:10279595-10279614 | None:intergenic | 50.0% | |
| AGTGGTCCAATTGTGCCACA+AGG | - | Chr5:10278249-10278268 | MsG0580024820.01.T01:CDS | 50.0% | |
| CCATGGGAATTAGGCGAAGA+CGG | + | Chr5:10278531-10278550 | None:intergenic | 50.0% | |
| CCATTTCGCAGTGGAATCGT+AGG | + | Chr5:10278300-10278319 | None:intergenic | 50.0% | |
| CCTACGATTCCACTGCGAAA+TGG | - | Chr5:10278297-10278316 | MsG0580024820.01.T01:CDS | 50.0% | |
| GATTCCACTGCGAAATGGTC+TGG | - | Chr5:10278302-10278321 | MsG0580024820.01.T01:CDS | 50.0% | |
| ! | AGAAGCCCAAGCTTCAGGTT+TGG | - | Chr5:10279065-10279084 | MsG0580024820.01.T01:intron | 50.0% |
| ! | CAGTCTCTGGAGAGCTCATT+TGG | + | Chr5:10278854-10278873 | None:intergenic | 50.0% |
| ! | GAGAGAAGTTCTGACCACGA+AGG | + | Chr5:10278504-10278523 | None:intergenic | 50.0% |
| ! | TCTCTGAGTTCCACCCCTTT+TGG | + | Chr5:10278050-10278069 | None:intergenic | 50.0% |
| ACCACCAGACCATTTCGCAG+TGG | + | Chr5:10278309-10278328 | None:intergenic | 55.0% | |
| CCGTCTTCGCCTAATTCCCA+TGG | - | Chr5:10278528-10278547 | MsG0580024820.01.T01:CDS | 55.0% | |
| GGCGTTTCACCCTTCAACAG+TGG | - | Chr5:10278126-10278145 | MsG0580024820.01.T01:exon | 55.0% | |
| GGGTGAAACGCCAGCTACAT+AGG | + | Chr5:10278118-10278137 | None:intergenic | 55.0% | |
| GGTACAGAAGCCCAAGCTTC+AGG | - | Chr5:10279060-10279079 | MsG0580024820.01.T01:intron | 55.0% | |
| TCCACTGCGAAATGGTCTGG+TGG | - | Chr5:10278305-10278324 | MsG0580024820.01.T01:CDS | 55.0% | |
| ! | TGGCTTGCAAAGCAGCTGCT+TGG | + | Chr5:10279670-10279689 | None:intergenic | 55.0% |
| CTGTGTCGAACGCGCCTTCG+TGG | - | Chr5:10278487-10278506 | MsG0580024820.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 10277874 | 10279962 | 10277874 | ID=MsG0580024820.01;Name=MsG0580024820.01 |
| Chr5 | mRNA | 10277874 | 10279962 | 10277874 | ID=MsG0580024820.01.T01;Parent=MsG0580024820.01;Name=MsG0580024820.01.T01;_AED=0.27;_eAED=0.27;_QI=87|0.75|0.6|1|1|1|5|263|370 |
| Chr5 | exon | 10277874 | 10278340 | 10277874 | ID=MsG0580024820.01.T01:exon:4631;Parent=MsG0580024820.01.T01 |
| Chr5 | exon | 10278523 | 10278607 | 10278523 | ID=MsG0580024820.01.T01:exon:4630;Parent=MsG0580024820.01.T01 |
| Chr5 | exon | 10278712 | 10278889 | 10278712 | ID=MsG0580024820.01.T01:exon:4629;Parent=MsG0580024820.01.T01 |
| Chr5 | exon | 10278990 | 10279046 | 10278990 | ID=MsG0580024820.01.T01:exon:4628;Parent=MsG0580024820.01.T01 |
| Chr5 | exon | 10279287 | 10279962 | 10279287 | ID=MsG0580024820.01.T01:exon:4627;Parent=MsG0580024820.01.T01 |
| Chr5 | five_prime_UTR | 10279876 | 10279962 | 10279876 | ID=MsG0580024820.01.T01:five_prime_utr;Parent=MsG0580024820.01.T01 |
| Chr5 | CDS | 10279287 | 10279875 | 10279287 | ID=MsG0580024820.01.T01:cds;Parent=MsG0580024820.01.T01 |
| Chr5 | CDS | 10278990 | 10279046 | 10278990 | ID=MsG0580024820.01.T01:cds;Parent=MsG0580024820.01.T01 |
| Chr5 | CDS | 10278712 | 10278889 | 10278712 | ID=MsG0580024820.01.T01:cds;Parent=MsG0580024820.01.T01 |
| Chr5 | CDS | 10278523 | 10278607 | 10278523 | ID=MsG0580024820.01.T01:cds;Parent=MsG0580024820.01.T01 |
| Chr5 | CDS | 10278137 | 10278340 | 10278137 | ID=MsG0580024820.01.T01:cds;Parent=MsG0580024820.01.T01 |
| Chr5 | three_prime_UTR | 10277874 | 10278136 | 10277874 | ID=MsG0580024820.01.T01:three_prime_utr;Parent=MsG0580024820.01.T01 |
| Gene Sequence |
| Protein sequence |
