AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016355.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016355.01.T01 MTR_3g088060 94.828 58 3 0 90 147 230 287 2.20e-34 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016355.01.T01 AT1G21790 70.968 62 14 2 90 147 227 288 8.71e-21 85.9

Find 44 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAAGGATGCTCACAAATT+TGG 0.191248 3:-82401861 MsG0380016355.01.T01:CDS
CTGGCTCTGTTTGGCATGGC+TGG 0.219114 3:-82401819 MsG0380016355.01.T01:CDS
CGCGGTTGAGCTATTCTTCT+TGG 0.262347 3:-82403803 MsG0380016355.01.T01:CDS
AACGGATAAGGGTGGATGTT+TGG 0.360759 3:+82403680 None:intergenic
TCTTGGCAACTCTCATTCTC+TGG 0.369484 3:-82403786 MsG0380016355.01.T01:CDS
AAGAGGAGAAGAAACGGATA+AGG 0.410157 3:+82403668 None:intergenic
TTTGGTGTGTGAGAAGAATC+TGG 0.411251 3:+82403746 None:intergenic
AATATTCTCAACATTGGTCT+TGG 0.415865 3:-82401792 MsG0380016355.01.T01:CDS
GAGTTACCACTGGCTCTGTT+TGG 0.431537 3:-82401828 MsG0380016355.01.T01:CDS
TATAGAGAAGTTGTTGTGTT+TGG 0.437275 3:+82403728 None:intergenic
TGGCTCTGTTTGGCATGGCT+GGG 0.443083 3:-82401818 MsG0380016355.01.T01:CDS
TCCGTCGTAACCTCCTCTTC+AGG 0.455764 3:-82403588 MsG0380016355.01.T01:intron
AGAGGAGAAGAAACGGATAA+GGG 0.493108 3:+82403669 None:intergenic
GGATGTTTGGTTGTAAAAGA+AGG 0.496211 3:+82403693 None:intergenic
TTGGTTGTAAAAGAAGGAAC+CGG 0.508809 3:+82403699 None:intergenic
ACCACTGGCTCTGTTTGGCA+TGG 0.525327 3:-82401823 MsG0380016355.01.T01:CDS
ATTCGAAATGGCGAAGGAGA+TGG 0.531694 3:-82403844 MsG0380016355.01.T01:exon
TCTCAACATTGGTCTTGGCA+TGG 0.539727 3:-82401787 MsG0380016355.01.T01:CDS
GCGAAGGAGATGGAGGAAGG+TGG 0.545274 3:-82403834 MsG0380016355.01.T01:CDS
GAGATGGAGGAAGGTGGAAA+CGG 0.549529 3:-82403828 MsG0380016355.01.T01:CDS
TTGGTGTGTGAGAAGAATCT+GGG 0.555159 3:+82403747 None:intergenic
GGAGAAGAAACGGATAAGGG+TGG 0.560583 3:+82403672 None:intergenic
AGAGAGAGAACCTGAAGAGG+AGG 0.563195 3:+82403578 None:intergenic
GATGCTCACAAATTTGGAAA+GGG 0.564979 3:-82401855 MsG0380016355.01.T01:CDS
GGATGCTCACAAATTTGGAA+AGG 0.568150 3:-82401856 MsG0380016355.01.T01:CDS
GAGAGCATTCGAAATGGCGA+AGG 0.588204 3:-82403850 MsG0380016355.01.T01:exon
AAAGGGTGTGGAGTTACCAC+TGG 0.594748 3:-82401838 MsG0380016355.01.T01:CDS
GACGGAGTGGATAAGTGATA+CGG 0.595064 3:+82403605 None:intergenic
ATGGCGAAGGAGATGGAGGA+AGG 0.598966 3:-82403837 MsG0380016355.01.T01:CDS
CAACTTCTCTATATCATCGC+CGG 0.599036 3:-82403718 MsG0380016355.01.T01:CDS
AAGAGAGAGAGAACCTGAAG+AGG 0.600993 3:+82403575 None:intergenic
CATCACAGCGAAACTCATCA+AGG 0.603697 3:-82401877 MsG0380016355.01.T01:intron
TCACAAATTTGGAAAGGGTG+TGG 0.605756 3:-82401850 MsG0380016355.01.T01:CDS
CGAAATGGCGAAGGAGATGG+AGG 0.605768 3:-82403841 MsG0380016355.01.T01:exon
CGGCGGGTGTTAACGAAGAG+AGG 0.615828 3:+82403625 None:intergenic
GGGATGAATATTCTCAACAT+TGG 0.620763 3:-82401798 MsG0380016355.01.T01:CDS
AAGAGGAGGTTACGACGGAG+TGG 0.629565 3:+82403592 None:intergenic
AAGAATCTGGGAGGAAACAG+AGG 0.630605 3:+82403759 None:intergenic
ACCTGAAGAGGAGGTTACGA+CGG 0.640318 3:+82403587 None:intergenic
GCCATGCCAAACAGAGCCAG+TGG 0.650373 3:+82401822 None:intergenic
GAGTGGATAAGTGATACGGC+GGG 0.657754 3:+82403609 None:intergenic
AGGAAGGTGGAAACGGAACG+CGG 0.713913 3:-82403821 MsG0380016355.01.T01:CDS
GGAGTGGATAAGTGATACGG+CGG 0.726542 3:+82403608 None:intergenic
GTGTGTGAGAAGAATCTGGG+AGG 0.767740 3:+82403750 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATCCTTTATAAATAAA+GGG + Chr3:82402864-82402883 None:intergenic 10.0%
!! TTATAATCCTTTATAAATAA+AGG + Chr3:82402865-82402884 None:intergenic 10.0%
!!! CAGTTTTTTTTTTTTTTAAA+AGG - Chr3:82402375-82402394 MsG0380016355.01.T01:intron 10.0%
!! AAAAGTAAATTATTCAAACA+GGG + Chr3:82402565-82402584 None:intergenic 15.0%
!! AACAAAATTAATTATTGCAA+AGG + Chr3:82402992-82403011 None:intergenic 15.0%
!!! TAAATTTTAATAGTCTTACT+TGG - Chr3:82402882-82402901 MsG0380016355.01.T01:intron 15.0%
!!! TTTGCAATAATTAATTTTGT+TGG - Chr3:82402991-82403010 MsG0380016355.01.T01:intron 15.0%
!! CAAAAGTAAATTATTCAAAC+AGG + Chr3:82402566-82402585 None:intergenic 20.0%
!!! CCATTTGTTATTATAGAAAT+AGG + Chr3:82402132-82402151 None:intergenic 20.0%
!!! CCTATTTCTATAATAACAAA+TGG - Chr3:82402129-82402148 MsG0380016355.01.T01:intron 20.0%
!!! TGTAGATTTGTTTTGAAATT+TGG + Chr3:82402935-82402954 None:intergenic 20.0%
! AAAACCTTTATAGCAATTAC+TGG - Chr3:82402519-82402538 MsG0380016355.01.T01:intron 25.0%
! AAACCTTTATAGCAATTACT+GGG - Chr3:82402520-82402539 MsG0380016355.01.T01:intron 25.0%
! ATATACTACACACATTCAAA+GGG + Chr3:82403467-82403486 None:intergenic 25.0%
! ATTAGATAGAACAAAGAAGA+AGG + Chr3:82403391-82403410 None:intergenic 25.0%
! GATTTGTGTTATGTGTAATT+GGG - Chr3:82402635-82402654 MsG0380016355.01.T01:intron 25.0%
! TAAAGTAAATCATACGCATA+GGG + Chr3:82402236-82402255 None:intergenic 25.0%
!! ATAAGAGTAAGTTGAGAATA+AGG + Chr3:82403350-82403369 None:intergenic 25.0%
!! ATTTTCATCTTGTTCAAACA+GGG - Chr3:82403096-82403115 MsG0380016355.01.T01:intron 25.0%
!! GTGTATCCCTTTATTTATAA+AGG - Chr3:82402855-82402874 MsG0380016355.01.T01:intron 25.0%
!! TGATTTGTGTTATGTGTAAT+TGG - Chr3:82402634-82402653 MsG0380016355.01.T01:intron 25.0%
!!! TCTCTCTATTATTAATTTGC+AGG - Chr3:82402057-82402076 MsG0380016355.01.T01:intron 25.0%
AACCTTTATAGCAATTACTG+GGG - Chr3:82402521-82402540 MsG0380016355.01.T01:intron 30.0%
AATTGGGCCTAATTTACTAT+TGG - Chr3:82402651-82402670 MsG0380016355.01.T01:intron 30.0%
ACAATAACTTAAGAGGATTC+AGG + Chr3:82402278-82402297 None:intergenic 30.0%
ACCTCCTAAGAAAATATAAG+AGG + Chr3:82402755-82402774 None:intergenic 30.0%
ACTATAGTATCAGAACTAAG+AGG - Chr3:82403433-82403452 MsG0380016355.01.T01:intron 30.0%
ATGCAAAACAAAACATGATG+AGG + Chr3:82402610-82402629 None:intergenic 30.0%
ATTGTTAGGGATGATGATAT+CGG + Chr3:82402810-82402829 None:intergenic 30.0%
ATTTGAGGAGGATCATAAAA+AGG - Chr3:82402828-82402847 MsG0380016355.01.T01:intron 30.0%
CATATACTACACACATTCAA+AGG + Chr3:82403468-82403487 None:intergenic 30.0%
CCTTATACCTTATATACAGA+CGG - Chr3:82402680-82402699 MsG0380016355.01.T01:intron 30.0%
CTAAAGTAAATCATACGCAT+AGG + Chr3:82402237-82402256 None:intergenic 30.0%
CTTATACCTTATATACAGAC+GGG - Chr3:82402681-82402700 MsG0380016355.01.T01:intron 30.0%
GCGTTATTGTTAAGTTAGAA+TGG - Chr3:82403649-82403668 MsG0380016355.01.T01:CDS 30.0%
GCTTACTACAATAACTTAAG+AGG + Chr3:82402285-82402304 None:intergenic 30.0%
TAACAAGCAAATTGACCATT+TGG + Chr3:82402328-82402347 None:intergenic 30.0%
TAAGAAAATATAAGAGGAGG+AGG + Chr3:82402749-82402768 None:intergenic 30.0%
TATAGAGAAGTTGTTGTGTT+TGG + Chr3:82401873-82401892 None:intergenic 30.0%
TCCTAAGAAAATATAAGAGG+AGG + Chr3:82402752-82402771 None:intergenic 30.0%
TGTCAAAGATATATCCATCA+AGG - Chr3:82402584-82402603 MsG0380016355.01.T01:intron 30.0%
TTACTTTGCATATGATCAGT+GGG - Chr3:82403213-82403232 MsG0380016355.01.T01:intron 30.0%
! AATATTCTCAACATTGGTCT+TGG - Chr3:82403806-82403825 MsG0380016355.01.T01:CDS 30.0%
! GATTTTCATCTTGTTCAAAC+AGG - Chr3:82403095-82403114 MsG0380016355.01.T01:intron 30.0%
! TCCTCCTCTTATATTTTCTT+AGG - Chr3:82402748-82402767 MsG0380016355.01.T01:intron 30.0%
! TCCTCTTATATTTTCTTAGG+AGG - Chr3:82402751-82402770 MsG0380016355.01.T01:intron 30.0%
! TTTTCATCTTGTTCAAACAG+GGG - Chr3:82403097-82403116 MsG0380016355.01.T01:intron 30.0%
!! AAGTTAGAATGGTTCTGAAT+TGG - Chr3:82403660-82403679 MsG0380016355.01.T01:CDS 30.0%
!! ATTTTGAAGAGGAGAAGAAA+CGG + Chr3:82401939-82401958 None:intergenic 30.0%
!! TAAAAGCTTTTAAGAGAGAG+AGG - Chr3:82403840-82403859 MsG0380016355.01.T01:CDS 30.0%
!!! AATTTTGAGAGCATTCGAAA+TGG - Chr3:82401742-82401761 MsG0380016355.01.T01:CDS 30.0%
!!! CATCATGTTTTGTTTTGCAT+TGG - Chr3:82402610-82402629 MsG0380016355.01.T01:intron 30.0%
AAGCAAGAGTGAAGCAAATA+AGG + Chr3:82403302-82403321 None:intergenic 35.0%
ATCAAGGATGCTCACAAATT+TGG - Chr3:82403737-82403756 MsG0380016355.01.T01:CDS 35.0%
ATGATCCTCCTCAAATTGTT+AGG + Chr3:82402824-82402843 None:intergenic 35.0%
CCGTCTGTATATAAGGTATA+AGG + Chr3:82402683-82402702 None:intergenic 35.0%
GAGTGCACCAATAGTAAATT+AGG + Chr3:82402661-82402680 None:intergenic 35.0%
GATGCTCACAAATTTGGAAA+GGG - Chr3:82403743-82403762 MsG0380016355.01.T01:CDS 35.0%
GCTTCATTACCGTTATATAG+TGG - Chr3:82403240-82403259 MsG0380016355.01.T01:intron 35.0%
GGATGTTTGGTTGTAAAAGA+AGG + Chr3:82401908-82401927 None:intergenic 35.0%
GGGATCAAACCACTATATAA+CGG + Chr3:82403252-82403271 None:intergenic 35.0%
GGGATGAATATTCTCAACAT+TGG - Chr3:82403800-82403819 MsG0380016355.01.T01:CDS 35.0%
GTTGAGAATAAGGTAGTTGA+TGG + Chr3:82403340-82403359 None:intergenic 35.0%
TAAATACGACTTCTCTGTGA+TGG - Chr3:82403560-82403579 MsG0380016355.01.T01:intron 35.0%
TAACTTAACAATAACGCTCG+CGG + Chr3:82403646-82403665 None:intergenic 35.0%
TACCCCAGTAATTGCTATAA+AGG + Chr3:82402526-82402545 None:intergenic 35.0%
TCATCATCCCTAACAATTTG+AGG - Chr3:82402813-82402832 MsG0380016355.01.T01:intron 35.0%
TCTGCAACATTGCAATATCA+TGG - Chr3:82402398-82402417 MsG0380016355.01.T01:intron 35.0%
TGATCCTCCTCAAATTGTTA+GGG + Chr3:82402823-82402842 None:intergenic 35.0%
TTGGTTGTAAAAGAAGGAAC+CGG + Chr3:82401902-82401921 None:intergenic 35.0%
! GTTACTTTGCATATGATCAG+TGG - Chr3:82403212-82403231 MsG0380016355.01.T01:intron 35.0%
!! AGAGAGTGATGATTTTGAAG+AGG + Chr3:82401950-82401969 None:intergenic 35.0%
AAAACATGATGAGGCCTTGA+TGG + Chr3:82402601-82402620 None:intergenic 40.0%
AAGAGGAGAAGAAACGGATA+AGG + Chr3:82401933-82401952 None:intergenic 40.0%
ACACACATTCAAAGGGAGAA+GGG + Chr3:82403460-82403479 None:intergenic 40.0%
ACGGAATAAACTCTGCTTTG+AGG + Chr3:82402785-82402804 None:intergenic 40.0%
AGAGGAGAAGAAACGGATAA+GGG + Chr3:82401932-82401951 None:intergenic 40.0%
AGATGATGCAGAAGGATAGA+AGG + Chr3:82403273-82403292 None:intergenic 40.0%
AGGGATGATGATATCGGAAA+CGG + Chr3:82402804-82402823 None:intergenic 40.0%
ATCATATGCAAAGTAACCGC+AGG + Chr3:82403209-82403228 None:intergenic 40.0%
ATGTCTGTGTGATTGCAATG+CGG - Chr3:82402427-82402446 MsG0380016355.01.T01:intron 40.0%
CAACTTCTCTATATCATCGC+CGG - Chr3:82401880-82401899 MsG0380016355.01.T01:intron 40.0%
CATCTTTCTGCATGTGAGAA+AGG - Chr3:82403595-82403614 MsG0380016355.01.T01:CDS 40.0%
CTTTCTCACATGCAGAAAGA+TGG + Chr3:82403597-82403616 None:intergenic 40.0%
GATGATGCAGAAGGATAGAA+GGG + Chr3:82403272-82403291 None:intergenic 40.0%
GGATGCTCACAAATTTGGAA+AGG - Chr3:82403742-82403761 MsG0380016355.01.T01:CDS 40.0%
TACACACATTCAAAGGGAGA+AGG + Chr3:82403461-82403480 None:intergenic 40.0%
TCAACTTACTCTTATCTGCG+AGG - Chr3:82403355-82403374 MsG0380016355.01.T01:intron 40.0%
TCACAAATTTGGAAAGGGTG+TGG - Chr3:82403748-82403767 MsG0380016355.01.T01:CDS 40.0%
TCATCCCTAACAATTTGAGG+AGG - Chr3:82402816-82402835 MsG0380016355.01.T01:intron 40.0%
TTACCTCTCTCTCTTCTCAT+CGG - Chr3:82403041-82403060 MsG0380016355.01.T01:intron 40.0%
TTCAAACAGGGGTTGAGTAA+TGG - Chr3:82403108-82403127 MsG0380016355.01.T01:intron 40.0%
TTGGTGTGTGAGAAGAATCT+GGG + Chr3:82401854-82401873 None:intergenic 40.0%
! AATGGATTCAGCGGAATGTT+TGG - Chr3:82403126-82403145 MsG0380016355.01.T01:intron 40.0%
! TTTGGTGTGTGAGAAGAATC+TGG + Chr3:82401855-82401874 None:intergenic 40.0%
!! AAGCTTTTAAGAGAGAGAGG+AGG - Chr3:82403843-82403862 MsG0380016355.01.T01:exon 40.0%
!!! GAAGCATTGTGTTTTTCCTG+CGG - Chr3:82403190-82403209 MsG0380016355.01.T01:intron 40.0%
AACGGATAAGGGTGGATGTT+TGG + Chr3:82401921-82401940 None:intergenic 45.0%
AAGAATCTGGGAGGAAACAG+AGG + Chr3:82401842-82401861 None:intergenic 45.0%
AAGAGAGAGAGAACCTGAAG+AGG + Chr3:82402026-82402045 None:intergenic 45.0%
ACGCTACCCGTCTGTATATA+AGG + Chr3:82402690-82402709 None:intergenic 45.0%
ACTGGGGTAAGTAGAGAATC+AGG - Chr3:82402537-82402556 MsG0380016355.01.T01:intron 45.0%
ATGTTTGGATCACTCGCAGT+TGG - Chr3:82403141-82403160 MsG0380016355.01.T01:intron 45.0%
ATTCGAAATGGCGAAGGAGA+TGG - Chr3:82401754-82401773 MsG0380016355.01.T01:CDS 45.0%
CACAATGCTTCAAATGCCCA+TGG + Chr3:82403181-82403200 None:intergenic 45.0%
CATCACAGCGAAACTCATCA+AGG - Chr3:82403721-82403740 MsG0380016355.01.T01:CDS 45.0%
CTATCTCCTCCACATATCAC+AGG - Chr3:82402475-82402494 MsG0380016355.01.T01:intron 45.0%
CTGGGGTAAGTAGAGAATCA+GGG - Chr3:82402538-82402557 MsG0380016355.01.T01:intron 45.0%
GAATTGGACCACCTTCTTTG+TGG - Chr3:82403676-82403695 MsG0380016355.01.T01:CDS 45.0%
GACGGAGTGGATAAGTGATA+CGG + Chr3:82401996-82402015 None:intergenic 45.0%
GTGATATGTGGAGGAGATAG+TGG + Chr3:82402475-82402494 None:intergenic 45.0%
TCTTGGCAACTCTCATTCTC+TGG - Chr3:82401812-82401831 MsG0380016355.01.T01:CDS 45.0%
TGGGGTAAGTAGAGAATCAG+GGG - Chr3:82402539-82402558 MsG0380016355.01.T01:intron 45.0%
TGTCGCAATCCTGTGATATG+TGG + Chr3:82402487-82402506 None:intergenic 45.0%
TGTGAGAAAGGTGAGACGAA+TGG - Chr3:82403607-82403626 MsG0380016355.01.T01:CDS 45.0%
! CTTTGCGCTTGATGACCAAA+TGG - Chr3:82402310-82402329 MsG0380016355.01.T01:intron 45.0%
! TCATACGCATAGGGCTTGTT+TGG + Chr3:82402227-82402246 None:intergenic 45.0%
!! GGGTTGAGTAATGGATTCAG+CGG - Chr3:82403117-82403136 MsG0380016355.01.T01:intron 45.0%
!! TCTCAACATTGGTCTTGGCA+TGG - Chr3:82403811-82403830 MsG0380016355.01.T01:CDS 45.0%
ACACCTTGCCACAAAGAAGG+TGG + Chr3:82403687-82403706 None:intergenic 50.0%
ACCTGAAGAGGAGGTTACGA+CGG + Chr3:82402014-82402033 None:intergenic 50.0%
ACTCCGATGAGAAGAGAGAG+AGG + Chr3:82403047-82403066 None:intergenic 50.0%
AGAAAGGTGAGACGAATGGC+CGG - Chr3:82403611-82403630 MsG0380016355.01.T01:CDS 50.0%
AGAGAGAGAACCTGAAGAGG+AGG + Chr3:82402023-82402042 None:intergenic 50.0%
CACACACCTTGCCACAAAGA+AGG + Chr3:82403690-82403709 None:intergenic 50.0%
CGCAATCCTGTGATATGTGG+AGG + Chr3:82402484-82402503 None:intergenic 50.0%
CGCGGTTGAGCTATTCTTCT+TGG - Chr3:82401795-82401814 MsG0380016355.01.T01:CDS 50.0%
GAGATGGAGGAAGGTGGAAA+CGG - Chr3:82401770-82401789 MsG0380016355.01.T01:CDS 50.0%
GAGTGGATAAGTGATACGGC+GGG + Chr3:82401992-82402011 None:intergenic 50.0%
GATCACTCGCAGTTGGTTGA+AGG - Chr3:82403148-82403167 MsG0380016355.01.T01:intron 50.0%
GGAGAACGAGATGATGCAGA+AGG + Chr3:82403281-82403300 None:intergenic 50.0%
GGAGAAGAAACGGATAAGGG+TGG + Chr3:82401929-82401948 None:intergenic 50.0%
GGAGTGGATAAGTGATACGG+CGG + Chr3:82401993-82402012 None:intergenic 50.0%
GGTCACGATTGAGACTGCAT+TGG - Chr3:82402448-82402467 MsG0380016355.01.T01:intron 50.0%
GTGTGTGAGAAGAATCTGGG+AGG + Chr3:82401851-82401870 None:intergenic 50.0%
! AAAGGGTGTGGAGTTACCAC+TGG - Chr3:82403760-82403779 MsG0380016355.01.T01:CDS 50.0%
!! CGCAGTTGGTTGAAGGTACT+TGG - Chr3:82403155-82403174 MsG0380016355.01.T01:intron 50.0%
!! GAGAGCATTCGAAATGGCGA+AGG - Chr3:82401748-82401767 MsG0380016355.01.T01:CDS 50.0%
!! GAGTTACCACTGGCTCTGTT+TGG - Chr3:82403770-82403789 MsG0380016355.01.T01:CDS 50.0%
!! GGTTGAAGGTACTTGGCCAT+GGG - Chr3:82403162-82403181 MsG0380016355.01.T01:intron 50.0%
!! TGGTTGAAGGTACTTGGCCA+TGG - Chr3:82403161-82403180 MsG0380016355.01.T01:intron 50.0%
AAGAGGAGGTTACGACGGAG+TGG + Chr3:82402009-82402028 None:intergenic 55.0%
AGGAAGGTGGAAACGGAACG+CGG - Chr3:82401777-82401796 MsG0380016355.01.T01:CDS 55.0%
ATGGCGAAGGAGATGGAGGA+AGG - Chr3:82401761-82401780 MsG0380016355.01.T01:CDS 55.0%
CGAAATGGCGAAGGAGATGG+AGG - Chr3:82401757-82401776 MsG0380016355.01.T01:CDS 55.0%
GGACCACCTTCTTTGTGGCA+AGG - Chr3:82403681-82403700 MsG0380016355.01.T01:CDS 55.0%
TCCGTCGTAACCTCCTCTTC+AGG - Chr3:82402010-82402029 MsG0380016355.01.T01:intron 55.0%
! TGGCTCTGTTTGGCATGGCT+GGG - Chr3:82403780-82403799 MsG0380016355.01.T01:CDS 55.0%
!! ACCACTGGCTCTGTTTGGCA+TGG - Chr3:82403775-82403794 MsG0380016355.01.T01:CDS 55.0%
CGGCGGGTGTTAACGAAGAG+AGG + Chr3:82401976-82401995 None:intergenic 60.0%
GCCATGCCAAACAGAGCCAG+TGG + Chr3:82403779-82403798 None:intergenic 60.0%
GCGAAGGAGATGGAGGAAGG+TGG - Chr3:82401764-82401783 MsG0380016355.01.T01:CDS 60.0%
!! CTGGCTCTGTTTGGCATGGC+TGG - Chr3:82403779-82403798 MsG0380016355.01.T01:CDS 60.0%
! ACGCTCGCGGCATCGAATGC+CGG + Chr3:82403633-82403652 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 82401719 82403901 82401719 ID=MsG0380016355.01;Name=MsG0380016355.01
Chr3 mRNA 82401719 82403901 82401719 ID=MsG0380016355.01.T01;Parent=MsG0380016355.01;Name=MsG0380016355.01.T01;_AED=0.45;_eAED=0.45;_QI=42|0|0.5|1|0|0|2|0|147
Chr3 exon 82401719 82401891 82401719 ID=MsG0380016355.01.T01:exon:13873;Parent=MsG0380016355.01.T01
Chr3 exon 82403589 82403901 82403589 ID=MsG0380016355.01.T01:exon:13872;Parent=MsG0380016355.01.T01
Chr3 five_prime_UTR 82403860 82403901 82403860 ID=MsG0380016355.01.T01:five_prime_utr;Parent=MsG0380016355.01.T01
Chr3 CDS 82403589 82403859 82403589 ID=MsG0380016355.01.T01:cds;Parent=MsG0380016355.01.T01
Chr3 CDS 82401719 82401891 82401719 ID=MsG0380016355.01.T01:cds;Parent=MsG0380016355.01.T01
Gene Sequence

>MsG0380016355.01.T01

ATGGCGAAGGAGATGGAGGAAGGTGGAAACGGAACGCGGTTGAGCTATTCTTCTTGGCAACTCTCATTCTCTGGCTTGCCTCTGTTTCCTCCCAGATTCTTCTCACACACCAAACACAACAACTTCTCTATATCATCGCCGGTTCCTTCTTTTACAACCAAACATCCACCCTTATCCGTTTCTTCTCCTCTTCAAAATCATCACTCTCTGATCCTCTCTTCGTTAACACCCGCCGTATCACTTATCCACTCCGTCGTAACCTCCTCTTCAGCGAAACTCATCAAGGATGCTCACAAATTTGGAAAGGGTGTGGAGTTACCACTGGCTCTGTTTGGCATGGCTGGGATGAATATTCTCAACATTGGTCTTGGCATGGATCTCTTAAAAGCTTTTAAGAGAGAGAGGAGGTCTCAAAATGCTAATCATCGTCAACATCATGAATGA
Protein sequence

>MsG0380016355.01.T01

MAKEMEEGGNGTRLSYSSWQLSFSGLPLFPPRFFSHTKHNNFSISSPVPSFTTKHPPLSVSSPLQNHHSLILSSLTPAVSLIHSVVTSSSAKLIKDAHKFGKGVELPLALFGMAGMNILNIGLGMDLLKAFKRERRSQNANHRQHHE*