AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023535.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023535.01.T01 MTR_8g095410 69.157 522 51 8 1 463 1 471 0.0 655
MsG0480023535.01.T02 MTR_8g095410 69.157 522 51 8 1 463 1 471 0.0 655
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023535.01.T01 AT1G47570 40.971 515 192 7 8 462 2 464 1.86e-126 375
MsG0480023535.01.T01 AT1G47570 41.010 495 188 5 27 462 2 451 2.03e-124 370
MsG0480023535.01.T01 AT1G47570 39.246 451 164 6 8 400 2 400 2.30e-99 304
MsG0480023535.01.T02 AT1G47570 40.971 515 192 7 8 462 2 464 1.86e-126 375
MsG0480023535.01.T02 AT1G47570 41.010 495 188 5 27 462 2 451 2.03e-124 370
MsG0480023535.01.T02 AT1G47570 39.246 451 164 6 8 400 2 400 2.30e-99 304

Find 22 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATATTTATATGCATTTAT+TGG 0.222657 4:+86575334 None:intergenic
CCAGATTTCATCTGAGGGTT+TGG 0.287343 4:+86575193 None:intergenic
CCAAACCCTCAGATGAAATC+TGG 0.331263 4:-86575193 MsG0480023535.01.T01:CDS
TCTTCTGTCTCTGCGGTTGA+AGG 0.382095 4:+86575294 None:intergenic
TTTGGCTGAGGCTGAGGCTG+AGG 0.410909 4:+86575211 None:intergenic
TGAGGCTGAGGCTGAGGCTG+AGG 0.411595 4:+86575217 None:intergenic
TTCATCTGAGGGTTTGGCTG+AGG 0.428073 4:+86575199 None:intergenic
AACGGCACAGGAGGAGGAGG+AGG 0.436707 4:-86575435 MsG0480023535.01.T02:five_prime_UTR
TGAGGGTTTGGCTGAGGCTG+AGG 0.463885 4:+86575205 None:intergenic
CTTCTGTCTCTGCGGTTGAA+GGG 0.484880 4:+86575295 None:intergenic
AGGAGGAGGAGTCGAGTACA+AGG 0.490601 4:-86575418 MsG0480023535.01.T01:five_prime_UTR
ACATATAACGGCACAGGAGG+AGG 0.492445 4:-86575441 MsG0480023535.01.T02:five_prime_UTR
CTTTGCCCAGATTTCATCTG+AGG 0.498710 4:+86575187 None:intergenic
ACTCTCAAAATGACATATAA+CGG 0.500418 4:-86575453 None:intergenic
GATGAAATCTGGGCAAAGCT+TGG 0.523498 4:-86575182 MsG0480023535.01.T01:intron
CAAACCCTCAGATGAAATCT+GGG 0.534656 4:-86575192 MsG0480023535.01.T01:CDS
TTTGCCCAGATTTCATCTGA+GGG 0.577223 4:+86575188 None:intergenic
AAATGTTGAAGAGAGTGCAG+AGG 0.586730 4:+86575381 None:intergenic
TATAACGGCACAGGAGGAGG+AGG 0.588674 4:-86575438 MsG0480023535.01.T02:five_prime_UTR
AAAATGACATATAACGGCAC+AGG 0.607970 4:-86575447 None:intergenic
ATGACATATAACGGCACAGG+AGG 0.629913 4:-86575444 None:intergenic
GAAAGAATCTTCTGTCTCTG+CGG 0.685151 4:+86575287 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTTATATGCATTTAT+TGG + Chr4:86568916-86568935 None:intergenic 10.0%
!! CAAAAAATTATTAACTTTAA+CGG + Chr4:86573493-86573512 None:intergenic 10.0%
!!! AAAAAAATATAGTTCATTTT+TGG + Chr4:86572316-86572335 None:intergenic 10.0%
!!! AATTTTTTAAGAGATAAAAA+TGG + Chr4:86569283-86569302 None:intergenic 10.0%
!!! CAAAAAATAAATACTTTTTT+TGG + Chr4:86570485-86570504 None:intergenic 10.0%
!!! TATATCTTAACAATTTTATA+GGG - Chr4:86569411-86569430 MsG0480023535.01.T01:intron 10.0%
!!! TTTTTAAATTAGAATCAAAA+GGG - Chr4:86569194-86569213 MsG0480023535.01.T01:intron 10.0%
!!! TTTTTTAAATTAGAATCAAA+AGG - Chr4:86569193-86569212 MsG0480023535.01.T01:intron 10.0%
!! AAACAAAAACAAAAATCAAA+AGG + Chr4:86575293-86575312 None:intergenic 15.0%
!! AACAAAAACAAAAATCAAAA+GGG + Chr4:86575292-86575311 None:intergenic 15.0%
!! AGATTGCATAAATTAATATT+TGG + Chr4:86575136-86575155 None:intergenic 15.0%
!! GCTTAGAAATAATAAATTAA+TGG + Chr4:86571039-86571058 None:intergenic 15.0%
!! TAAAAAATTCAATTCATGTT+AGG - Chr4:86569294-86569313 MsG0480023535.01.T01:intron 15.0%
!!! AAATTGTGTTTTAAATTGTT+TGG - Chr4:86570702-86570721 MsG0480023535.01.T01:intron 15.0%
!!! AAATTTTACAAAGAAAATGA+AGG - Chr4:86572105-86572124 MsG0480023535.01.T01:intron 15.0%
!!! ATTTATACTGAATTAATTTG+CGG - Chr4:86574736-86574755 MsG0480023535.01.T01:intron 15.0%
!!! CTATATCTTAACAATTTTAT+AGG - Chr4:86569410-86569429 MsG0480023535.01.T01:intron 15.0%
!!! GAATTAAATAGATTGATAAT+CGG + Chr4:86571061-86571080 None:intergenic 15.0%
!!! TATGATTGATATTTTTAACA+TGG - Chr4:86570920-86570939 MsG0480023535.01.T01:intron 15.0%
!!! TCATTTTCTTTGTAAAATTT+TGG + Chr4:86572105-86572124 None:intergenic 15.0%
!!! TTATTTTTTTGGTAAAAAAG+TGG - Chr4:86575106-86575125 MsG0480023535.01.T01:intron 15.0%
!!! TTTATTTTTTTCTATTGTCT+TGG - Chr4:86574516-86574535 MsG0480023535.01.T01:intron 15.0%
!! AAAAGAATATGAACATTCAA+AGG + Chr4:86574931-86574950 None:intergenic 20.0%
!! AGAGAAATCATGATAATTAA+AGG + Chr4:86572244-86572263 None:intergenic 20.0%
!! ATAATTTAGTATGTGGAATA+AGG + Chr4:86569102-86569121 None:intergenic 20.0%
!! ATGATGAAACAAAAAAATGA+AGG + Chr4:86573023-86573042 None:intergenic 20.0%
!! CAACAACAAAAATGTTTATT+CGG + Chr4:86573949-86573968 None:intergenic 20.0%
!! CACTAGCATAAATATTAAAA+AGG + Chr4:86570638-86570657 None:intergenic 20.0%
!! GAAAAGAAAATAAGTCTAAA+TGG + Chr4:86572849-86572868 None:intergenic 20.0%
!! TATGACATAAATTGCATAAA+CGG + Chr4:86571690-86571709 None:intergenic 20.0%
!! TCAAACAAAACTAATTATCT+TGG + Chr4:86570139-86570158 None:intergenic 20.0%
!! TCAAACCTTAAAATTATTGA+AGG - Chr4:86574667-86574686 MsG0480023535.01.T01:intron 20.0%
!! TCTTACAAAAAGTAATTCAT+TGG - Chr4:86574422-86574441 MsG0480023535.01.T01:intron 20.0%
!! TTAAATAGTGATAACAGTTA+CGG - Chr4:86569530-86569549 MsG0480023535.01.T01:intron 20.0%
!! TTATATGTATAATCAGCTAT+AGG + Chr4:86570669-86570688 None:intergenic 20.0%
!!! AAATTATTTTTCAGAGAAAC+AGG - Chr4:86570163-86570182 MsG0480023535.01.T01:CDS 20.0%
!!! AATTATTTTTCAGAGAAACA+GGG - Chr4:86570164-86570183 MsG0480023535.01.T01:CDS 20.0%
!!! ACAAAATTCAAATCTTTTTC+AGG + Chr4:86572893-86572912 None:intergenic 20.0%
!!! ACTATATTTTTTTGTTGTTG+TGG - Chr4:86572323-86572342 MsG0480023535.01.T01:intron 20.0%
!!! AGAGTTCAATATGATTTTTT+TGG + Chr4:86574790-86574809 None:intergenic 20.0%
!!! ATAATTTTAAGGTTTGACAT+TGG + Chr4:86574664-86574683 None:intergenic 20.0%
!!! ATTTACCTAGATGTTTTAAT+AGG - Chr4:86574637-86574656 MsG0480023535.01.T01:intron 20.0%
!!! ATTTTTCCAATAAAATTCCA+TGG + Chr4:86572385-86572404 None:intergenic 20.0%
!!! CTATATTTTTTTGTTGTTGT+GGG - Chr4:86572324-86572343 MsG0480023535.01.T01:intron 20.0%
!!! GTTCTTATATTTTTGTGTAA+TGG - Chr4:86573531-86573550 MsG0480023535.01.T01:intron 20.0%
!!! TAATTTTAAGGTTTGACATT+GGG + Chr4:86574663-86574682 None:intergenic 20.0%
!!! TATATTTTTTTGTTGTTGTG+GGG - Chr4:86572325-86572344 MsG0480023535.01.T01:intron 20.0%
!!! TCTAATTGATTTTGATCAAT+GGG - Chr4:86568981-86569000 MsG0480023535.01.T01:intron 20.0%
!!! TTAATGGATAATTTAGTATG+TGG + Chr4:86569109-86569128 None:intergenic 20.0%
!!! TTATCTTTAAGCAAAGTATT+TGG - Chr4:86571004-86571023 MsG0480023535.01.T01:intron 20.0%
!!! TTCTAATTGATTTTGATCAA+TGG - Chr4:86568980-86568999 MsG0480023535.01.T01:intron 20.0%
!!! TTTACTATGTTTATGTTTTG+TGG - Chr4:86573995-86574014 MsG0480023535.01.T01:intron 20.0%
!!! TTTACTGGTTAATTATTCAA+TGG + Chr4:86570955-86570974 None:intergenic 20.0%
!!! TTTATTGTATTTTCACTGTT+AGG - Chr4:86572408-86572427 MsG0480023535.01.T01:intron 20.0%
!!! TTTTTAAGAGATAAAAATGG+AGG + Chr4:86569280-86569299 None:intergenic 20.0%
! AAAACAAGTGTGGAAAATAA+AGG - Chr4:86569744-86569763 MsG0480023535.01.T01:intron 25.0%
! AAATATGATGAAAACTCATC+TGG - Chr4:86569783-86569802 MsG0480023535.01.T01:intron 25.0%
! AACAACAGTAACTATATTGA+AGG + Chr4:86573060-86573079 None:intergenic 25.0%
! AAGGAAACAAAATGTAAACA+AGG - Chr4:86574272-86574291 MsG0480023535.01.T01:CDS 25.0%
! AATATGATGAAAACTCATCT+GGG - Chr4:86569784-86569803 MsG0480023535.01.T01:intron 25.0%
! ACCAGTAAATATCTTTAATG+TGG - Chr4:86570966-86570985 MsG0480023535.01.T01:intron 25.0%
! AGAAAACCAAGAAAAATGAT+GGG + Chr4:86572591-86572610 None:intergenic 25.0%
! ATAGAAAACACACATTCTTA+AGG + Chr4:86572754-86572773 None:intergenic 25.0%
! ATTTCATATAGTTGATCACT+AGG - Chr4:86571865-86571884 MsG0480023535.01.T01:intron 25.0%
! CAAATGTGTTAGTAATTATC+AGG + Chr4:86569691-86569710 None:intergenic 25.0%
! CAGAATTACAATAGCAAATT+GGG + Chr4:86572930-86572949 None:intergenic 25.0%
! CATAGAAAATATGAATGTTC+TGG - Chr4:86571831-86571850 MsG0480023535.01.T01:intron 25.0%
! CCATTAAAGTTTCAATCTTT+GGG - Chr4:86569122-86569141 MsG0480023535.01.T01:intron 25.0%
! CTCCAACTTTAATGAAATAT+TGG - Chr4:86572289-86572308 MsG0480023535.01.T01:CDS 25.0%
! CTTATGTATAAGTCAATATC+TGG + Chr4:86574494-86574513 None:intergenic 25.0%
! CTTTAACTGTTATATGAGTT+TGG - Chr4:86569711-86569730 MsG0480023535.01.T01:intron 25.0%
! GAATCATTCAAGATATACAT+AGG - Chr4:86572726-86572745 MsG0480023535.01.T01:CDS 25.0%
! GTAGTATTTGCTTAAACATA+TGG - Chr4:86571290-86571309 MsG0480023535.01.T01:intron 25.0%
! GTATACTTTCAATACTTGAA+CGG + Chr4:86570408-86570427 None:intergenic 25.0%
! GTCCAATATTTCATTAAAGT+TGG + Chr4:86572294-86572313 None:intergenic 25.0%
! TAATTATCTTGGCAGATATA+GGG + Chr4:86570128-86570147 None:intergenic 25.0%
! TATGAAAACAATAAATAGCC+AGG + Chr4:86574247-86574266 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG - Chr4:86572196-86572215 MsG0480023535.01.T01:intron 25.0%
! TCCACATTAAAGATATTTAC+TGG + Chr4:86570970-86570989 None:intergenic 25.0%
! TCCATTAAAGTTTCAATCTT+TGG - Chr4:86569121-86569140 MsG0480023535.01.T01:intron 25.0%
! TTACAAAGAAAATGAAGGAT+TGG - Chr4:86572110-86572129 MsG0480023535.01.T01:intron 25.0%
! TTATCACTATTTAAAAACCC+TGG + Chr4:86569524-86569543 None:intergenic 25.0%
! TTCAATATAGTTACTGTTGT+TGG - Chr4:86573059-86573078 MsG0480023535.01.T01:intron 25.0%
!! ATAATTTTCTTCTCTTCCTA+GGG - Chr4:86573779-86573798 MsG0480023535.01.T01:intron 25.0%
!! ATCAAAAGGGTTGAAATTTT+TGG - Chr4:86569207-86569226 MsG0480023535.01.T01:intron 25.0%
!! TATTTGCCATGGAATTTTAT+TGG - Chr4:86572376-86572395 MsG0480023535.01.T01:intron 25.0%
!! TGCAACCTTCAATAATTTTA+AGG + Chr4:86574675-86574694 None:intergenic 25.0%
!! TTATTGTTTTCATAGCATGA+AGG - Chr4:86574253-86574272 MsG0480023535.01.T01:CDS 25.0%
!! TTCATGTTGTCATTTATTGT+AGG - Chr4:86573342-86573361 MsG0480023535.01.T01:intron 25.0%
!!! AGATTTGAATTTTGTTTGTG+TGG - Chr4:86572898-86572917 MsG0480023535.01.T01:intron 25.0%
!!! ATGATTTTTTTGGCATTGTT+GGG + Chr4:86574780-86574799 None:intergenic 25.0%
!!! ATTTGAATTTTGTTTGTGTG+GGG - Chr4:86572900-86572919 MsG0480023535.01.T01:intron 25.0%
!!! ATTTTTTGAAAGTTGCTTTC+TGG - Chr4:86573505-86573524 MsG0480023535.01.T01:intron 25.0%
!!! CAATGAGTGCATTATTTTTT+TGG - Chr4:86575095-86575114 MsG0480023535.01.T01:intron 25.0%
!!! GATTTGAATTTTGTTTGTGT+GGG - Chr4:86572899-86572918 MsG0480023535.01.T01:intron 25.0%
!!! GTTGAAGGGTTTTTATTTTA+GGG + Chr4:86568941-86568960 None:intergenic 25.0%
!!! TATATTTTTGTGTAATGGTG+TGG - Chr4:86573536-86573555 MsG0480023535.01.T01:intron 25.0%
!!! TATGATTTTTTTGGCATTGT+TGG + Chr4:86574781-86574800 None:intergenic 25.0%
!!! TTGTTTTTCCACTTTCTTTA+TGG - Chr4:86573279-86573298 MsG0480023535.01.T01:intron 25.0%
!!! TTTAGGGCTTCAATTTTATA+GGG - Chr4:86569361-86569380 MsG0480023535.01.T01:intron 25.0%
!!! TTTTAGGGCTTCAATTTTAT+AGG - Chr4:86569360-86569379 MsG0480023535.01.T01:intron 25.0%
AAACCTCTTGTTCATAGTTA+TGG - Chr4:86571718-86571737 MsG0480023535.01.T01:CDS 30.0%
AAACTTATCAAACATGCACT+TGG - Chr4:86574346-86574365 MsG0480023535.01.T01:CDS 30.0%
AACCTCTTGTTCATAGTTAT+GGG - Chr4:86571719-86571738 MsG0480023535.01.T01:CDS 30.0%
AAGCTGAATAACAGAGAAAT+CGG - Chr4:86574092-86574111 MsG0480023535.01.T01:intron 30.0%
AAGTGTGGAAAATAAAGGAA+TGG - Chr4:86569749-86569768 MsG0480023535.01.T01:intron 30.0%
AATATAGTTACTGTTGTTGG+CGG - Chr4:86573062-86573081 MsG0480023535.01.T01:intron 30.0%
AATATTATCAGTTCGTTCAG+CGG + Chr4:86575200-86575219 None:intergenic 30.0%
ACAAAAATTGAATCTTGTCC+TGG - Chr4:86574226-86574245 MsG0480023535.01.T01:CDS 30.0%
ACAAAATATATCCCTTCACT+TGG + Chr4:86569856-86569875 None:intergenic 30.0%
ACAACATATATGCAGAAGAA+AGG + Chr4:86570452-86570471 None:intergenic 30.0%
ACAATGGTTAATCAAAGTGA+TGG - Chr4:86572478-86572497 MsG0480023535.01.T01:intron 30.0%
ACCATGTTCATTAGAAAAAG+AGG + Chr4:86571379-86571398 None:intergenic 30.0%
AGATTAAGCTGAATTGCAAA+TGG - Chr4:86571599-86571618 MsG0480023535.01.T01:intron 30.0%
AGTATGTGGAATAAGGAAAA+GGG + Chr4:86569095-86569114 None:intergenic 30.0%
AGTTAACTCAATAAAAGTCC+TGG - Chr4:86570735-86570754 MsG0480023535.01.T01:intron 30.0%
ATAAACAAAGTAGTCCATAC+CGG + Chr4:86573465-86573484 None:intergenic 30.0%
ATAAGTCTAAATGGCATTTC+TGG + Chr4:86572840-86572859 None:intergenic 30.0%
ATAATATCCTCTATTTGCCA+TGG - Chr4:86572365-86572384 MsG0480023535.01.T01:intron 30.0%
ATACCGGTCTTAAAATATCT+GGG + Chr4:86573449-86573468 None:intergenic 30.0%
ATAGTTCACCATAAAGAAAG+TGG + Chr4:86573290-86573309 None:intergenic 30.0%
ATATCGTTCAAAAATGCTGT+TGG - Chr4:86570264-86570283 MsG0480023535.01.T01:intron 30.0%
ATATCTGAACACACTATATC+AGG - Chr4:86573870-86573889 MsG0480023535.01.T01:intron 30.0%
ATCCATACCAAAAGTTATGA+AGG + Chr4:86571342-86571361 None:intergenic 30.0%
ATTAAGATGAAATCCCAAAG+AGG + Chr4:86569165-86569184 None:intergenic 30.0%
ATTCCATCATTACCACTTTA+TGG - Chr4:86571077-86571096 MsG0480023535.01.T01:intron 30.0%
ATTGACGACTTACAATATTG+AGG + Chr4:86573170-86573189 None:intergenic 30.0%
CACAATACAGAATACAAACA+CGG + Chr4:86572664-86572683 None:intergenic 30.0%
CAGAAAACCAAGAAAAATGA+TGG + Chr4:86572592-86572611 None:intergenic 30.0%
CCCAAAGATTGAAACTTTAA+TGG + Chr4:86569125-86569144 None:intergenic 30.0%
CGATTTCTTCAGATATTGTT+AGG + Chr4:86573581-86573600 None:intergenic 30.0%
CTAATTATCTTGGCAGATAT+AGG + Chr4:86570129-86570148 None:intergenic 30.0%
CTCTTAAATTACCAAGTGAA+GGG - Chr4:86569842-86569861 MsG0480023535.01.T01:intron 30.0%
GAAAACCAAGAAAAATGATG+GGG + Chr4:86572590-86572609 None:intergenic 30.0%
GAATATGAACATTCAAAGGT+TGG + Chr4:86574927-86574946 None:intergenic 30.0%
GATTAAGCTGAATTGCAAAT+GGG - Chr4:86571600-86571619 MsG0480023535.01.T01:intron 30.0%
GCAGAATTACAATAGCAAAT+TGG + Chr4:86572931-86572950 None:intergenic 30.0%
GTTAACTCAATAAAAGTCCT+GGG - Chr4:86570736-86570755 MsG0480023535.01.T01:intron 30.0%
TAAAATTCCATGGCAAATAG+AGG + Chr4:86572375-86572394 None:intergenic 30.0%
TAGTATGTGGAATAAGGAAA+AGG + Chr4:86569096-86569115 None:intergenic 30.0%
TATGTATAATCAGCTATAGG+AGG + Chr4:86570666-86570685 None:intergenic 30.0%
TCAAATAACACAACTCGTAA+AGG + Chr4:86572051-86572070 None:intergenic 30.0%
TGAAAGTTGCATAAGACAAA+CGG - Chr4:86574031-86574050 MsG0480023535.01.T01:intron 30.0%
TGGTAATTTAAGAGCCAAAT+TGG + Chr4:86569836-86569855 None:intergenic 30.0%
TGTATGTACTATTTACCTAC+AGG + Chr4:86574717-86574736 None:intergenic 30.0%
TTAAGATGAAATCCCAAAGA+GGG + Chr4:86569164-86569183 None:intergenic 30.0%
TTGATCTGATTGTACATTGA+TGG - Chr4:86574455-86574474 MsG0480023535.01.T01:intron 30.0%
TTGATTAACCATTGTTGTGT+TGG + Chr4:86572473-86572492 None:intergenic 30.0%
TTTCAGCTTCATGATAGTAA+AGG - Chr4:86570327-86570346 MsG0480023535.01.T01:intron 30.0%
! CATAATTTTCTTCTCTTCCT+AGG - Chr4:86573778-86573797 MsG0480023535.01.T01:intron 30.0%
! CTGATAATGCTTTGAGTTTA+AGG + Chr4:86575035-86575054 None:intergenic 30.0%
! CTGTACTAAATAGCGTATTT+TGG + Chr4:86573612-86573631 None:intergenic 30.0%
! GAAGTTTGAGACTTTCTTAA+GGG - Chr4:86569878-86569897 MsG0480023535.01.T01:intron 30.0%
! GTTTTTCCTATACCTTTTTC+AGG - Chr4:86571927-86571946 MsG0480023535.01.T01:intron 30.0%
! TACTGGTTGATGTACTTTAT+TGG - Chr4:86574849-86574868 MsG0480023535.01.T01:intron 30.0%
! TATCTTTTTGAATGGCCTAT+CGG - Chr4:86572813-86572832 MsG0480023535.01.T01:intron 30.0%
! TATTTTCACTGTTAGGTCAT+TGG - Chr4:86572415-86572434 MsG0480023535.01.T01:intron 30.0%
! TCACTGGTTATGAACATAAT+TGG + Chr4:86570856-86570875 None:intergenic 30.0%
! TCATAATTTTTCCCCTCTTT+GGG - Chr4:86569149-86569168 MsG0480023535.01.T01:intron 30.0%
! TCCTCTTTTTCTAATGAACA+TGG - Chr4:86571375-86571394 MsG0480023535.01.T01:intron 30.0%
! TCGAATACAATACTTGTTGA+CGG - Chr4:86570531-86570550 MsG0480023535.01.T01:intron 30.0%
! TGAAGTTTGAGACTTTCTTA+AGG - Chr4:86569877-86569896 MsG0480023535.01.T01:intron 30.0%
! TTAGGGCTTCAATTTTATAG+GGG - Chr4:86569362-86569381 MsG0480023535.01.T01:intron 30.0%
! TTCATAATTTTTCCCCTCTT+TGG - Chr4:86569148-86569167 MsG0480023535.01.T01:intron 30.0%
! TTCATGCAGATTCTTTTCAT+GGG + Chr4:86573910-86573929 None:intergenic 30.0%
! TTGTCATTTATTGTAGGCTT+AGG - Chr4:86573348-86573367 MsG0480023535.01.T01:intron 30.0%
! TTTAAGGTACTTACGTGTTT+GGG + Chr4:86575019-86575038 None:intergenic 30.0%
!! ATTTTCCACACTTGTTTTCA+AGG + Chr4:86569742-86569761 None:intergenic 30.0%
!! GTTTTCTATTTTGAGCTGAA+TGG - Chr4:86572765-86572784 MsG0480023535.01.T01:CDS 30.0%
!! TAAAGGCTTTGAATAGATGA+TGG - Chr4:86573805-86573824 MsG0480023535.01.T01:intron 30.0%
!! TTTTTCCCCATCATTTTTCT+TGG - Chr4:86572582-86572601 MsG0480023535.01.T01:intron 30.0%
!!! AGCTTTTTTCTTTCACCTTT+TGG - Chr4:86574180-86574199 MsG0480023535.01.T01:intron 30.0%
!!! GCGTGCATGTTATTTTTTTA+GGG - Chr4:86569345-86569364 MsG0480023535.01.T01:intron 30.0%
!!! GCTTTTTTCTTTCACCTTTT+GGG - Chr4:86574181-86574200 MsG0480023535.01.T01:intron 30.0%
!!! GGTTGAAGGGTTTTTATTTT+AGG + Chr4:86568942-86568961 None:intergenic 30.0%
!!! TGCGTGCATGTTATTTTTTT+AGG - Chr4:86569344-86569363 MsG0480023535.01.T01:intron 30.0%
!!! TGTTGTTATTTTTACACAGC+AGG - Chr4:86571901-86571920 MsG0480023535.01.T01:intron 30.0%
!!! TTACCTCTTATTTTCCAATG+TGG + Chr4:86570055-86570074 None:intergenic 30.0%
AAAATATCTGGGGAACAAAC+AGG + Chr4:86573438-86573457 None:intergenic 35.0%
AAAATGCTGTTGGAGCTTAT+AGG - Chr4:86570274-86570293 MsG0480023535.01.T01:intron 35.0%
AAAGTACATCAACCAGTATG+CGG + Chr4:86574847-86574866 None:intergenic 35.0%
AAAGTTGCATAAGACAAACG+GGG - Chr4:86574033-86574052 MsG0480023535.01.T01:intron 35.0%
AAATTGCACAACACAGAAAC+AGG + Chr4:86572267-86572286 None:intergenic 35.0%
AACGATATGTGACGAACAAT+GGG + Chr4:86570252-86570271 None:intergenic 35.0%
AAGAAACTAATTCCAGTTCC+TGG - Chr4:86575171-86575190 MsG0480023535.01.T01:intron 35.0%
AATACTTGAACGGAGAAGAA+AGG + Chr4:86570398-86570417 None:intergenic 35.0%
ACATTGGAGATGAATTGTGT+TGG + Chr4:86573102-86573121 None:intergenic 35.0%
ACTGAATCATTGTGCTAAAG+TGG - Chr4:86574614-86574633 MsG0480023535.01.T01:intron 35.0%
AGAGCAGTTGTTCAATTTGT+TGG - Chr4:86571517-86571536 MsG0480023535.01.T01:intron 35.0%
ATAGGTGGTGCAAAATAGTA+AGG - Chr4:86570010-86570029 MsG0480023535.01.T01:intron 35.0%
ATATAGTTACTGTTGTTGGC+GGG - Chr4:86573063-86573082 MsG0480023535.01.T01:intron 35.0%
ATTCTCCGCAATATCAAGAA+TGG + Chr4:86569564-86569583 None:intergenic 35.0%
CAAACTTGTCTTTCATGTGA+TGG - Chr4:86574123-86574142 MsG0480023535.01.T01:intron 35.0%
CAAATCCTAATGCCATAAAG+TGG + Chr4:86571092-86571111 None:intergenic 35.0%
CACTATATCAGGAATTCCTT+TGG - Chr4:86573881-86573900 MsG0480023535.01.T01:intron 35.0%
CAGTAGAAGTAATTAACCAG+TGG + Chr4:86569322-86569341 None:intergenic 35.0%
CAGTGATTGTTATCAGAAGT+TGG - Chr4:86574958-86574977 MsG0480023535.01.T01:intron 35.0%
CATACCGGTCTTAAAATATC+TGG + Chr4:86573450-86573469 None:intergenic 35.0%
CATTACCACTTTATGGCATT+AGG - Chr4:86571084-86571103 MsG0480023535.01.T01:intron 35.0%
CATTGGAGATGAATTGTGTT+GGG + Chr4:86573101-86573120 None:intergenic 35.0%
CCATTATACAATGTCAAACG+AGG - Chr4:86572536-86572555 MsG0480023535.01.T01:intron 35.0%
CCTCGTTTGACATTGTATAA+TGG + Chr4:86572539-86572558 None:intergenic 35.0%
CTTTCACCATATCCTGAAAA+AGG + Chr4:86571942-86571961 None:intergenic 35.0%
GAAAGTTGCATAAGACAAAC+GGG - Chr4:86574032-86574051 MsG0480023535.01.T01:intron 35.0%
GATCAACATCTACACATATC+TGG + Chr4:86571261-86571280 None:intergenic 35.0%
GCTCTTAAATTACCAAGTGA+AGG - Chr4:86569841-86569860 MsG0480023535.01.T01:intron 35.0%
GTAAAGGAATCATACTCACA+AGG + Chr4:86572035-86572054 None:intergenic 35.0%
GTAATGTGATACATACCTGT+AGG - Chr4:86574699-86574718 MsG0480023535.01.T01:intron 35.0%
GTATGTGGAATAAGGAAAAG+GGG + Chr4:86569094-86569113 None:intergenic 35.0%
GTTAAAACATCTCACCCAAA+AGG + Chr4:86574198-86574217 None:intergenic 35.0%
GTTGAGATAAGGTCAGATAA+AGG - Chr4:86569946-86569965 MsG0480023535.01.T01:intron 35.0%
TAAGATGAAATCCCAAAGAG+GGG + Chr4:86569163-86569182 None:intergenic 35.0%
TACCAAAAGTTATGAAGGCA+TGG + Chr4:86571337-86571356 None:intergenic 35.0%
TACCGGTCTTAAAATATCTG+GGG + Chr4:86573448-86573467 None:intergenic 35.0%
TCAGCAAGCTAATGCAAAAT+AGG + Chr4:86574375-86574394 None:intergenic 35.0%
TGAACATTCAAAGGTTGGAA+TGG + Chr4:86574922-86574941 None:intergenic 35.0%
TGACATAAAGCATAGCATGT+AGG - Chr4:86571643-86571662 MsG0480023535.01.T01:CDS 35.0%
TGACTTTCTTTACAATGTGC+AGG - Chr4:86572951-86572970 MsG0480023535.01.T01:intron 35.0%
TGGAAAGAAGAGTAGAAAGA+GGG - Chr4:86572441-86572460 MsG0480023535.01.T01:intron 35.0%
TTAAAACAGTGACGACGAAA+TGG + Chr4:86570229-86570248 None:intergenic 35.0%
TTGGGCCTATTAAAACATCT+AGG + Chr4:86574645-86574664 None:intergenic 35.0%
! AACGGATTTGATGTTGTCAA+AGG + Chr4:86569626-86569645 None:intergenic 35.0%
! AATTGGTATCCCCTCTAAAA+TGG + Chr4:86569819-86569838 None:intergenic 35.0%
! ACAAGAAGTGGTTGATATCT+CGG + Chr4:86569983-86570002 None:intergenic 35.0%
! AGGAACTGGAATTAGTTTCT+TGG + Chr4:86575172-86575191 None:intergenic 35.0%
! ATCTTTTTGAATGGCCTATC+GGG - Chr4:86572814-86572833 MsG0480023535.01.T01:intron 35.0%
! ATGCCATAAAGTGGTAATGA+TGG + Chr4:86571083-86571102 None:intergenic 35.0%
! CAGTATCGAAGAAGACATTA+AGG + Chr4:86571198-86571217 None:intergenic 35.0%
! CCATATCCTGAAAAAGGTAT+AGG + Chr4:86571936-86571955 None:intergenic 35.0%
! CGAATACAATACTTGTTGAC+GGG - Chr4:86570532-86570551 MsG0480023535.01.T01:intron 35.0%
! GAATACAATACTTGTTGACG+GGG - Chr4:86570533-86570552 MsG0480023535.01.T01:intron 35.0%
! GAGCAGTTGTTCAATTTGTT+GGG - Chr4:86571518-86571537 MsG0480023535.01.T01:intron 35.0%
! GTTCATGCAGATTCTTTTCA+TGG + Chr4:86573911-86573930 None:intergenic 35.0%
! GTTTAAGGTACTTACGTGTT+TGG + Chr4:86575020-86575039 None:intergenic 35.0%
! GTTTGTCATCCCATTTTAGA+GGG - Chr4:86569806-86569825 MsG0480023535.01.T01:intron 35.0%
! TGAAAGCATGAACACTATTG+AGG + Chr4:86570889-86570908 None:intergenic 35.0%
! TGCCTTCATAACTTTTGGTA+TGG - Chr4:86571337-86571356 MsG0480023535.01.T01:intron 35.0%
! TTTTGATCAATGGGAGAAAG+TGG - Chr4:86568990-86569009 MsG0480023535.01.T01:intron 35.0%
!! ATTGGTATCCCCTCTAAAAT+GGG + Chr4:86569818-86569837 None:intergenic 35.0%
!! GCTTTGAATAGATGATGGAA+TGG - Chr4:86573810-86573829 MsG0480023535.01.T01:intron 35.0%
!! TTTGTCATCCCATTTTAGAG+GGG - Chr4:86569807-86569826 MsG0480023535.01.T01:intron 35.0%
!! TTTTAGAGGGGATACCAATT+TGG - Chr4:86569819-86569838 MsG0480023535.01.T01:intron 35.0%
!!! CAGATATTTTAAGACCGGTA+TGG - Chr4:86573448-86573467 MsG0480023535.01.T01:intron 35.0%
!!! CCTATACCTTTTTCAGGATA+TGG - Chr4:86571933-86571952 MsG0480023535.01.T01:intron 35.0%
!!! TTCCCCAGATATTTTAAGAC+CGG - Chr4:86573443-86573462 MsG0480023535.01.T01:intron 35.0%
ACAAGAGAAGATTGCTGGTA+TGG - Chr4:86575351-86575370 MsG0480023535.01.T01:intron 40.0%
AGGTGACACTGTTGTTATCA+AGG - Chr4:86570569-86570588 MsG0480023535.01.T01:intron 40.0%
ATGATGAAATTGACCACGCA+AGG + Chr4:86573742-86573761 None:intergenic 40.0%
ATTCCACACTGTACTAGAGT+TGG + Chr4:86574886-86574905 None:intergenic 40.0%
ATTGCTGTGTACTAACTACC+AGG - Chr4:86569503-86569522 MsG0480023535.01.T01:intron 40.0%
CAAACCCTCAGATGAAATCT+GGG - Chr4:86569055-86569074 MsG0480023535.01.T01:intron 40.0%
CAATTCATGTTAGGTTCCAC+TGG - Chr4:86569303-86569322 MsG0480023535.01.T01:intron 40.0%
CATAAAATGTACCTCCGCAA+TGG + Chr4:86571563-86571582 None:intergenic 40.0%
CATCTCCAATGTCAAGAATG+TGG - Chr4:86573110-86573129 MsG0480023535.01.T01:intron 40.0%
CCACTTCTTGTGACAAACAT+AGG - Chr4:86569992-86570011 MsG0480023535.01.T01:intron 40.0%
CCTATGTTTGTCACAAGAAG+TGG + Chr4:86569995-86570014 None:intergenic 40.0%
CGTCTCCATTCTTGATATTG+CGG - Chr4:86569556-86569575 MsG0480023535.01.T01:intron 40.0%
CTCCCATAACTATGAACAAG+AGG + Chr4:86571724-86571743 None:intergenic 40.0%
CTGACCTTATCTCAACATCA+GGG + Chr4:86569942-86569961 None:intergenic 40.0%
CTGCCACATTGGAAAATAAG+AGG - Chr4:86570049-86570068 MsG0480023535.01.T01:intron 40.0%
CTGGAAAGAAGAGTAGAAAG+AGG - Chr4:86572440-86572459 MsG0480023535.01.T01:intron 40.0%
CTTCTCCTTGAAAACAAGTG+TGG - Chr4:86569734-86569753 MsG0480023535.01.T01:intron 40.0%
CTTCTTGTGACAAACATAGG+TGG - Chr4:86569995-86570014 MsG0480023535.01.T01:intron 40.0%
GAAAGAATCTTCTGTCTCTG+CGG + Chr4:86568963-86568982 None:intergenic 40.0%
GAACGATATGTGACGAACAA+TGG + Chr4:86570253-86570272 None:intergenic 40.0%
GACACTGTTGTTATCAAGGA+TGG - Chr4:86570573-86570592 MsG0480023535.01.T01:intron 40.0%
GACATATTAACACCGCATAC+TGG - Chr4:86574832-86574851 MsG0480023535.01.T01:intron 40.0%
GATACCCTGATGTTGAGATA+AGG - Chr4:86569935-86569954 MsG0480023535.01.T01:intron 40.0%
GATGGAAGTGAAATTATCCC+AGG - Chr4:86570591-86570610 MsG0480023535.01.T01:intron 40.0%
GTCATGTGACATTACAGCAA+TGG - Chr4:86571430-86571449 MsG0480023535.01.T01:intron 40.0%
GTTCCTACTAACAAACAGCA+TGG + Chr4:86570302-86570321 None:intergenic 40.0%
TAAAGCATAGCATGTAGGCA+TGG - Chr4:86571648-86571667 MsG0480023535.01.T01:CDS 40.0%
TAGACACGTATGCATCAGTA+CGG - Chr4:86572004-86572023 MsG0480023535.01.T01:intron 40.0%
TATTGTGTCTGTACACCTGA+TGG - Chr4:86569458-86569477 MsG0480023535.01.T01:intron 40.0%
TCTGACCTTATCTCAACATC+AGG + Chr4:86569943-86569962 None:intergenic 40.0%
TGATCTATGTTCTGCCACAT+TGG - Chr4:86570038-86570057 MsG0480023535.01.T01:intron 40.0%
TGATGAAATTGACCACGCAA+GGG + Chr4:86573741-86573760 None:intergenic 40.0%
TTCAAAGCCTTTAACTCCCT+AGG + Chr4:86573798-86573817 None:intergenic 40.0%
TTCCTCCACATTCTTGACAT+TGG + Chr4:86573118-86573137 None:intergenic 40.0%
TTCTCTTCCTAGGGAGTTAA+AGG - Chr4:86573788-86573807 MsG0480023535.01.T01:intron 40.0%
TTGAGGCAAGTAATTCTCAC+TGG + Chr4:86570872-86570891 None:intergenic 40.0%
TTGCTGTGTACTAACTACCA+GGG - Chr4:86569504-86569523 MsG0480023535.01.T01:intron 40.0%
TTTGCCCAGATTTCATCTGA+GGG + Chr4:86569062-86569081 None:intergenic 40.0%
! AAATGTTGAAGAGAGTGCAG+AGG + Chr4:86568869-86568888 None:intergenic 40.0%
! AGGTTCTAACCTTCTTTAGC+AGG + Chr4:86570618-86570637 None:intergenic 40.0%
! ATTTTGAGCTGAATGGTGCT+TGG - Chr4:86572772-86572791 MsG0480023535.01.T01:CDS 40.0%
! CTCCATGCCTTCATAACTTT+TGG - Chr4:86571332-86571351 MsG0480023535.01.T01:intron 40.0%
! GGATGTGATAGACCTTTTTG+CGG - Chr4:86573369-86573388 MsG0480023535.01.T01:intron 40.0%
! GGTTCTAACCTTCTTTAGCA+GGG + Chr4:86570617-86570636 None:intergenic 40.0%
! GGTTTGTCATCCCATTTTAG+AGG - Chr4:86569805-86569824 MsG0480023535.01.T01:intron 40.0%
! GTTCCATGCTGTTTGTTAGT+AGG - Chr4:86570296-86570315 MsG0480023535.01.T01:intron 40.0%
! TGAAAGTATACGTCTCTGCA+AGG - Chr4:86570417-86570436 MsG0480023535.01.T01:intron 40.0%
! TTCTTTTCATGGGCAACCAA+AGG + Chr4:86573900-86573919 None:intergenic 40.0%
!! TGGTGTCATTTCTCTTGTAC+TGG - Chr4:86574978-86574997 MsG0480023535.01.T01:intron 40.0%
AACCATGATCGAAGCTGCAT+CGG + Chr4:86569602-86569621 None:intergenic 45.0%
ACGAAAAATAGCGCGGTAGT+TGG - Chr4:86570759-86570778 MsG0480023535.01.T01:intron 45.0%
ACGCAGATATGATGACTGCT+GGG - Chr4:86574566-86574585 MsG0480023535.01.T01:intron 45.0%
AGAAGAGTAGAAAGAGGGAG+AGG - Chr4:86572446-86572465 MsG0480023535.01.T01:intron 45.0%
CACAGCAGTGTTGTCAATTG+CGG + Chr4:86573707-86573726 None:intergenic 45.0%
CACTGTTAGGTCATTGGATC+TGG - Chr4:86572421-86572440 MsG0480023535.01.T01:intron 45.0%
CATCCTCATGATTCACCATC+AGG + Chr4:86569476-86569495 None:intergenic 45.0%
CATCGACAAGAGAAGATTGC+TGG - Chr4:86575346-86575365 MsG0480023535.01.T01:intron 45.0%
CCAAACCCTCAGATGAAATC+TGG - Chr4:86569054-86569073 MsG0480023535.01.T01:intron 45.0%
CCAGATTTCATCTGAGGGTT+TGG + Chr4:86569057-86569076 None:intergenic 45.0%
CTCCAATGTCAAGAATGTGG+AGG - Chr4:86573113-86573132 MsG0480023535.01.T01:intron 45.0%
CTTTGCCCAGATTTCATCTG+AGG + Chr4:86569063-86569082 None:intergenic 45.0%
GAAGAGTAGAAAGAGGGAGA+GGG - Chr4:86572447-86572466 MsG0480023535.01.T01:intron 45.0%
GATGAAATCTGGGCAAAGCT+TGG - Chr4:86569065-86569084 MsG0480023535.01.T01:intron 45.0%
GCTGGTATGGATATGCATGT+CGG - Chr4:86575364-86575383 MsG0480023535.01.T01:intron 45.0%
GTTGCTTCTCAGAGTGGTTA+CGG - Chr4:86571452-86571471 MsG0480023535.01.T01:intron 45.0%
GTTTCCTTGGTCTGTAACGT+TGG - Chr4:86570789-86570808 MsG0480023535.01.T01:intron 45.0%
TACGAGCATGCTCTTCACTA+CGG + Chr4:86575398-86575417 None:intergenic 45.0%
TATGCCAACGTTACAGACCA+AGG + Chr4:86570796-86570815 None:intergenic 45.0%
TATGTCGCGCCTCTAAATCA+CGG - Chr4:86569645-86569664 MsG0480023535.01.T01:intron 45.0%
TCACTTTCTGCGTACCATTG+CGG - Chr4:86571546-86571565 MsG0480023535.01.T01:intron 45.0%
TCTTCTCTTGTCGATGCTTC+TGG + Chr4:86575342-86575361 None:intergenic 45.0%
TGAACAACTGCTCTGCATTG+AGG + Chr4:86571511-86571530 None:intergenic 45.0%
TGCAGGATGTCATATCAGAG+TGG - Chr4:86574063-86574082 MsG0480023535.01.T01:intron 45.0%
TTCATCGTGTGAGCGTCTTA+GGG + Chr4:86571974-86571993 None:intergenic 45.0%
! ACACCTGATGGTGAATCATG+AGG - Chr4:86569470-86569489 MsG0480023535.01.T01:intron 45.0%
! GATTTAGAGGCGCGACATAA+CGG + Chr4:86569644-86569663 None:intergenic 45.0%
! GTGAAGAGCATGCTCGTAAA+AGG - Chr4:86575400-86575419 MsG0480023535.01.T01:intron 45.0%
! TTTCTGGGCTAGACACGATT+TGG + Chr4:86571128-86571147 None:intergenic 45.0%
!! AGTTGGTAAGCGTGTTTCCT+TGG - Chr4:86570776-86570795 MsG0480023535.01.T01:intron 45.0%
!!! AAAAAATAAATACTTTTTTT+GGG + Chr4:86570484-86570503 None:intergenic 5.0%
AACCGATGCAGCTTCGATCA+TGG - Chr4:86569597-86569616 MsG0480023535.01.T01:intron 50.0%
AACCTTCTTTAGCAGGGCCT+GGG + Chr4:86570611-86570630 None:intergenic 50.0%
AGGAACACCAAGACCAGTAC+GGG + Chr4:86573150-86573169 None:intergenic 50.0%
CACGCAGATATGATGACTGC+TGG - Chr4:86574565-86574584 MsG0480023535.01.T01:intron 50.0%
CCACACTGTACTAGAGTTGG+TGG + Chr4:86574883-86574902 None:intergenic 50.0%
CCACCAACTCTAGTACAGTG+TGG - Chr4:86574880-86574899 MsG0480023535.01.T01:intron 50.0%
CTCCAGTATGCTCCGCAAAA+AGG + Chr4:86573384-86573403 None:intergenic 50.0%
CTTCATCGTGTGAGCGTCTT+AGG + Chr4:86571975-86571994 None:intergenic 50.0%
CTTCTGTCTCTGCGGTTGAA+GGG + Chr4:86568955-86568974 None:intergenic 50.0%
GAGGAACACCAAGACCAGTA+CGG + Chr4:86573151-86573170 None:intergenic 50.0%
GATCATCACTGTTCGCAGTG+TGG - Chr4:86572505-86572524 MsG0480023535.01.T01:intron 50.0%
GCAATGGTTGCTTCTCAGAG+TGG - Chr4:86571446-86571465 MsG0480023535.01.T01:intron 50.0%
GTAGTTATTGTGCCCTTGCG+TGG - Chr4:86573726-86573745 MsG0480023535.01.T01:intron 50.0%
GTTGCATAAGACAAACGGGG+AGG - Chr4:86574036-86574055 MsG0480023535.01.T01:intron 50.0%
TAACCTTCTTTAGCAGGGCC+TGG + Chr4:86570612-86570631 None:intergenic 50.0%
TCCTGGGACGAAAAATAGCG+CGG - Chr4:86570752-86570771 MsG0480023535.01.T01:intron 50.0%
TCTCTTGTCGATGCTTCTGG+TGG + Chr4:86575339-86575358 None:intergenic 50.0%
TCTTCTGTCTCTGCGGTTGA+AGG + Chr4:86568956-86568975 None:intergenic 50.0%
TTCATCTGAGGGTTTGGCTG+AGG + Chr4:86569051-86569070 None:intergenic 50.0%
! AATACTTGTTGACGGGGCTG+AGG - Chr4:86570539-86570558 MsG0480023535.01.T01:intron 50.0%
! AGCATACTGGAGTGCTCTTG+GGG - Chr4:86573392-86573411 MsG0480023535.01.T01:intron 50.0%
! GACCTTTTTGCGGAGCATAC+TGG - Chr4:86573379-86573398 MsG0480023535.01.T01:intron 50.0%
! GAGCATACTGGAGTGCTCTT+GGG - Chr4:86573391-86573410 MsG0480023535.01.T01:intron 50.0%
!! AATGGCATTTCTGGCCCGAT+AGG + Chr4:86572831-86572850 None:intergenic 50.0%
AACCTGCCAGACGCTGCTAA+AGG - Chr4:86571146-86571165 MsG0480023535.01.T01:CDS 55.0%
AACCTTTAGCAGCGTCTGGC+AGG + Chr4:86571151-86571170 None:intergenic 55.0%
ACAAACGGGGAGGACATTGC+AGG - Chr4:86574046-86574065 MsG0480023535.01.T01:intron 55.0%
ACACCAAGACCAGTACGGGA+AGG + Chr4:86573146-86573165 None:intergenic 55.0%
AGACCGCAGCCGTGATTTAG+AGG + Chr4:86569657-86569676 None:intergenic 55.0%
AGAGTGGTTACGGAGATCGC+AGG - Chr4:86571462-86571481 MsG0480023535.01.T01:intron 55.0%
AGGAGGAGGAGTCGAGTACA+AGG - Chr4:86568829-86568848 MsG0480023535.01.T01:CDS 55.0%
ATCCCAGGCCCTGCTAAAGA+AGG - Chr4:86570606-86570625 MsG0480023535.01.T01:intron 55.0%
CTGCTGGGACTCTTGTATGC+AGG - Chr4:86574581-86574600 MsG0480023535.01.T01:intron 55.0%
CTTTCTGCGTACCATTGCGG+AGG - Chr4:86571549-86571568 MsG0480023535.01.T01:intron 55.0%
GGAATGATGCCTTCCCGTAC+TGG - Chr4:86573134-86573153 MsG0480023535.01.T01:intron 55.0%
GGAGAGGGCCAACACAACAA+TGG - Chr4:86572462-86572481 MsG0480023535.01.T01:intron 55.0%
TATAACGGCACAGGAGGAGG+AGG - Chr4:86568809-86568828 MsG0480023535.01.T01:CDS 55.0%
TGCCAACCTTTAGCAGCGTC+TGG + Chr4:86571155-86571174 None:intergenic 55.0%
TGCCAGACGCTGCTAAAGGT+TGG - Chr4:86571150-86571169 MsG0480023535.01.T01:CDS 55.0%
! ATGCCTTCCCGTACTGGTCT+TGG - Chr4:86573140-86573159 MsG0480023535.01.T01:intron 55.0%
! CAGTTCGTTCAGCGGATTCC+AGG + Chr4:86575192-86575211 None:intergenic 55.0%
! GGAGCATACTGGAGTGCTCT+TGG - Chr4:86573390-86573409 MsG0480023535.01.T01:intron 55.0%
! GGAGTGCTCTTGGGGTAACT+GGG - Chr4:86573400-86573419 MsG0480023535.01.T01:intron 55.0%
! GTTCAGCGGATTCCAGGAAC+TGG + Chr4:86575186-86575205 None:intergenic 55.0%
! TGGAGTGCTCTTGGGGTAAC+TGG - Chr4:86573399-86573418 MsG0480023535.01.T01:intron 55.0%
!!! ACCGCGCTATTTTTCGTCCC+AGG + Chr4:86570756-86570775 None:intergenic 55.0%
AGCAGCGTCTGGCAGGTTTC+TGG + Chr4:86571144-86571163 None:intergenic 60.0%
CATGTTTGCCGTCCAACCCG+AGG - Chr4:86575426-86575445 MsG0480023535.01.T01:five_prime_UTR 60.0%
CTTGTTGACGGGGCTGAGGT+AGG - Chr4:86570543-86570562 MsG0480023535.01.T01:intron 60.0%
GCAGCGTCTGGCAGGTTTCT+GGG + Chr4:86571143-86571162 None:intergenic 60.0%
GCGCCTCTAAATCACGGCTG+CGG - Chr4:86569651-86569670 MsG0480023535.01.T01:intron 60.0%
GCTCTTGGGGTAACTGGGAG+TGG - Chr4:86573405-86573424 MsG0480023535.01.T01:intron 60.0%
TGAGGGTTTGGCTGAGGCTG+AGG + Chr4:86569045-86569064 None:intergenic 60.0%
TTTGGCTGAGGCTGAGGCTG+AGG + Chr4:86569039-86569058 None:intergenic 60.0%
!! AATGGGAGCCTCGGGTTGGA+CGG + Chr4:86575437-86575456 None:intergenic 60.0%
AACGGCACAGGAGGAGGAGG+AGG - Chr4:86568812-86568831 MsG0480023535.01.T01:CDS 65.0%
CAGGAATGGGAGCCTCGGGT+TGG + Chr4:86575441-86575460 None:intergenic 65.0%
GACGGGGCTGAGGTAGGCAA+AGG - Chr4:86570549-86570568 MsG0480023535.01.T01:intron 65.0%
TGAGGCTGAGGCTGAGGCTG+AGG + Chr4:86569027-86569046 None:intergenic 65.0%
GGCACAGGAGGAGGAGGAGG+AGG - Chr4:86568815-86568834 MsG0480023535.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 86568808 86575461 86568808 ID=MsG0480023535.01;Name=MsG0480023535.01
Chr4 mRNA 86568808 86575449 86568808 ID=MsG0480023535.01.T01;Parent=MsG0480023535.01;Name=MsG0480023535.01.T01;_AED=0.45;_eAED=0.46;_QI=67|0.66|0.69|1|0.66|0.61|13|0|463
Chr4 exon 86575183 86575303 86575183 ID=MsG0480023535.01.T01:exon:1685;Parent=MsG0480023535.01.T01
Chr4 exon 86575416 86575449 86575416 ID=MsG0480023535.01.T01:exon:1684;Parent=MsG0480023535.01.T01
Chr4 five_prime_UTR 86575416 86575449 86575416 ID=MsG0480023535.01.T01:five_prime_utr;Parent=MsG0480023535.01.T01
Chr4 five_prime_UTR 86575271 86575303 86575271 ID=MsG0480023535.01.T01:five_prime_utr;Parent=MsG0480023535.01.T01
Chr4 CDS 86575183 86575270 86575183 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86574199 86574370 86574199 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86573642 86573739 86573642 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86572699 86572805 86572699 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86572234 86572320 86572234 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86571614 86571839 86571614 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86571093 86571200 86571093 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86570805 86570905 86570805 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86570334 86570399 86570334 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86570156 86570243 86570156 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86569667 86569727 86569667 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 CDS 86568808 86568997 86568808 ID=MsG0480023535.01.T01:cds;Parent=MsG0480023535.01.T01
Chr4 mRNA 86568808 86575461 86568808 ID=MsG0480023535.01.T02;Parent=MsG0480023535.01;Name=MsG0480023535.01.T02;_AED=0.44;_eAED=0.45;_QI=191|0.63|0.66|1|0.72|0.66|12|0|463
Chr4 exon 86575183 86575461 86575183 ID=MsG0480023535.01.T02:exon:1697;Parent=MsG0480023535.01.T02
Chr4 five_prime_UTR 86575271 86575461 86575271 ID=MsG0480023535.01.T02:five_prime_utr;Parent=MsG0480023535.01.T02
Chr4 CDS 86575183 86575270 86575183 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86574199 86574370 86574199 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86573642 86573739 86573642 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86572699 86572805 86572699 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86572234 86572320 86572234 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86571614 86571839 86571614 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86571093 86571200 86571093 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86570805 86570905 86570805 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86570334 86570399 86570334 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86570156 86570243 86570156 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86569667 86569727 86569667 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Chr4 CDS 86568808 86568997 86568808 ID=MsG0480023535.01.T02:cds;Parent=MsG0480023535.01.T02
Gene Sequence

>MsG0480023535.01.T01

ATGGGAGAAAGTGGAGAATGCTCTGCTTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCAAACCCTCAGATGAAATCTGGGCAAAGCTTGGGACTCTTTTCTTTCATGCAGTTCAGTCTGACTCGAGATACCCTGATGTTGAGATAAGGTCAGATAAAGGCAAAATACGTTCCGAGATATCAACCACTTCTTGTGACAAACATAGGTGGTGCAAAATAGTAAGGAATTCTGATCTATGTTCTGCCACATTGGAAAATAAGAGTTCGAATACAATACTTGTTGACGGGGCTGAGGTAGGCAAAGGTGACACTGTTGTTATCAAGGATGGAAGTGAAATTATCCCAGGCCCTGCTAAAGAAGAGTGGTTACGGAGATCGCAGGAAAAACGTTCAACTGTTCTTTGTCCTCAATGCAGAGCAGTTGTTCAATTTGTTGGGAAAAATCACTTTCTGCGTACCATTGCGGAGGATATGGTGAAAGCTGATTCTTCCCTAAGACGCTCACACGATGAAGTTGTGCTTTTAGACACGTATGCATCAGTACGGTCAAACCTTGTCATTGGATCTGGAAAGAAGAGTAGAAAGAGGGAGAGGGCCAACACAACAATGGTTAATCAAAGTGATGGTGCAGATCATCACTGTTCGCAGTGTGGTAATATTACCATTATACAATGTCAAACGAGGCAGTCTATGCAGCACAATATATTTTTTTCCCCATCATTTTTCTTGGTTTTCTGTGCTAATTATTTACGACATTCAGTGTTAGTTATGTTATCAATAATTACTGTTGTTGGCGGGTTTCAATGCGATCCCAACACAATTCATCTCCAATGTCAAGAATGTGGAGGAATGATGCCTTCCCGTACTGGTCTTGGTGTTCCTCAATATTGCTTAGGATGTGATAGACCTTTTTGCGGAGCATACTGGAGTGCTCTTGGGGTAACTGGGAGTGGCTCTTATCCTGTTTGTTCCCCAGATATTTTAAGACCGATATCTGAACACACTATATCAGGAATTCCTTTGGTTGCCCATGAAAAGAATCTGCATGAACAGAATATCACTGAAAGTTGCATAAGACAAACGGGGAGGACATTGCAGGATGTCATATCAGAGTGGATAGCAAAGCTGAATAACAGAGAAATCGATACAACACGAATGATGCTGAATCACGCAGATATGATGACTGCTGGGACTCTTGTATGCAGTGTGCAAATTAAGCTGACCCTTTTGATTTTTGTTTTTGTTTGTATGTATTGCAAAAAGCTTCTACCACCAGAAGCATCGACAAGAGAAGATTGCTGGTATGGATATGCATGTCGGACACAGCACCGTAGTGAAGAGCATGCTCGTAAAAGGAATCATGTTTGCCGTCCAACCCGAGGCTCCCATTCCTGA

>MsG0480023535.01.T02

ATGGGAGAAAGTGGAGAATGCTCTGCTTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCAAACCCTCAGATGAAATCTGGGCAAAGCTTGGGACTCTTTTCTTTCATGCAGTTCAGTCTGACTCGAGATACCCTGATGTTGAGATAAGGTCAGATAAAGGCAAAATACGTTCCGAGATATCAACCACTTCTTGTGACAAACATAGGTGGTGCAAAATAGTAAGGAATTCTGATCTATGTTCTGCCACATTGGAAAATAAGAGTTCGAATACAATACTTGTTGACGGGGCTGAGGTAGGCAAAGGTGACACTGTTGTTATCAAGGATGGAAGTGAAATTATCCCAGGCCCTGCTAAAGAAGAGTGGTTACGGAGATCGCAGGAAAAACGTTCAACTGTTCTTTGTCCTCAATGCAGAGCAGTTGTTCAATTTGTTGGGAAAAATCACTTTCTGCGTACCATTGCGGAGGATATGGTGAAAGCTGATTCTTCCCTAAGACGCTCACACGATGAAGTTGTGCTTTTAGACACGTATGCATCAGTACGGTCAAACCTTGTCATTGGATCTGGAAAGAAGAGTAGAAAGAGGGAGAGGGCCAACACAACAATGGTTAATCAAAGTGATGGTGCAGATCATCACTGTTCGCAGTGTGGTAATATTACCATTATACAATGTCAAACGAGGCAGTCTATGCAGCACAATATATTTTTTTCCCCATCATTTTTCTTGGTTTTCTGTGCTAATTATTTACGACATTCAGTGTTAGTTATGTTATCAATAATTACTGTTGTTGGCGGGTTTCAATGCGATCCCAACACAATTCATCTCCAATGTCAAGAATGTGGAGGAATGATGCCTTCCCGTACTGGTCTTGGTGTTCCTCAATATTGCTTAGGATGTGATAGACCTTTTTGCGGAGCATACTGGAGTGCTCTTGGGGTAACTGGGAGTGGCTCTTATCCTGTTTGTTCCCCAGATATTTTAAGACCGATATCTGAACACACTATATCAGGAATTCCTTTGGTTGCCCATGAAAAGAATCTGCATGAACAGAATATCACTGAAAGTTGCATAAGACAAACGGGGAGGACATTGCAGGATGTCATATCAGAGTGGATAGCAAAGCTGAATAACAGAGAAATCGATACAACACGAATGATGCTGAATCACGCAGATATGATGACTGCTGGGACTCTTGTATGCAGTGTGCAAATTAAGCTGACCCTTTTGATTTTTGTTTTTGTTTGTATGTATTGCAAAAAGCTTCTACCACCAGAAGCATCGACAAGAGAAGATTGCTGGTATGGATATGCATGTCGGACACAGCACCGTAGTGAAGAGCATGCTCGTAAAAGGAATCATGTTTGCCGTCCAACCCGAGGCTCCCATTCCTGA
Protein sequence

>MsG0480023535.01.T01

MGESGECSASASASASASAKPSDEIWAKLGTLFFHAVQSDSRYPDVEIRSDKGKIRSEISTTSCDKHRWCKIVRNSDLCSATLENKSSNTILVDGAEVGKGDTVVIKDGSEIIPGPAKEEWLRRSQEKRSTVLCPQCRAVVQFVGKNHFLRTIAEDMVKADSSLRRSHDEVVLLDTYASVRSNLVIGSGKKSRKRERANTTMVNQSDGADHHCSQCGNITIIQCQTRQSMQHNIFFSPSFFLVFCANYLRHSVLVMLSIITVVGGFQCDPNTIHLQCQECGGMMPSRTGLGVPQYCLGCDRPFCGAYWSALGVTGSGSYPVCSPDILRPISEHTISGIPLVAHEKNLHEQNITESCIRQTGRTLQDVISEWIAKLNNREIDTTRMMLNHADMMTAGTLVCSVQIKLTLLIFVFVCMYCKKLLPPEASTREDCWYGYACRTQHRSEEHARKRNHVCRPTRGSHS*

>MsG0480023535.01.T02

MGESGECSASASASASASAKPSDEIWAKLGTLFFHAVQSDSRYPDVEIRSDKGKIRSEISTTSCDKHRWCKIVRNSDLCSATLENKSSNTILVDGAEVGKGDTVVIKDGSEIIPGPAKEEWLRRSQEKRSTVLCPQCRAVVQFVGKNHFLRTIAEDMVKADSSLRRSHDEVVLLDTYASVRSNLVIGSGKKSRKRERANTTMVNQSDGADHHCSQCGNITIIQCQTRQSMQHNIFFSPSFFLVFCANYLRHSVLVMLSIITVVGGFQCDPNTIHLQCQECGGMMPSRTGLGVPQYCLGCDRPFCGAYWSALGVTGSGSYPVCSPDILRPISEHTISGIPLVAHEKNLHEQNITESCIRQTGRTLQDVISEWIAKLNNREIDTTRMMLNHADMMTAGTLVCSVQIKLTLLIFVFVCMYCKKLLPPEASTREDCWYGYACRTQHRSEEHARKRNHVCRPTRGSHS*