Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017595.01.T04 | AFK42621.1 | 100 | 158 | 0 | 0 | 1 | 158 | 1 | 158 | 3.76E-109 | 317 |
| MsG0380017595.01.T03 | KEH35974.1 | 100 | 253 | 0 | 0 | 1 | 253 | 223 | 475 | 1.09E-180 | 514 |
| MsG0380017595.01.T01 | XP_013461938.1 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0 | 1070 |
| MsG0380017595.01.T05 | AFK42621.1 | 100 | 94 | 0 | 0 | 1 | 94 | 65 | 158 | 1.77E-59 | 189 |
| MsG0380017595.01.T02 | XP_013461938.1 | 100 | 484 | 0 | 0 | 1 | 484 | 49 | 532 | 0 | 974 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017595.01.T01 | Q9LV21 | 87.873 | 536 | 61 | 1 | 1 | 532 | 1 | 536 | 0 | 964 |
| MsG0380017595.01.T02 | Q9LV21 | 90.909 | 484 | 44 | 0 | 1 | 484 | 53 | 536 | 0 | 904 |
| MsG0380017595.01.T03 | Q9LV21 | 93.281 | 253 | 17 | 0 | 1 | 253 | 284 | 536 | 1.18E-173 | 492 |
| MsG0380017595.01.T04 | Q9LV21 | 93.038 | 158 | 11 | 0 | 1 | 158 | 379 | 536 | 5.08E-104 | 310 |
| MsG0380017595.01.T05 | Q9LV21 | 92.553 | 94 | 7 | 0 | 1 | 94 | 443 | 536 | 2.67E-56 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017595.01.T01 | A0A072V3N8 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1070 |
| MsG0380017595.01.T02 | A0A072V3N8 | 100.000 | 484 | 0 | 0 | 1 | 484 | 49 | 532 | 0.0 | 974 |
| MsG0380017595.01.T03 | A0A072V1S9 | 100.000 | 253 | 0 | 0 | 1 | 253 | 223 | 475 | 0.0 | 514 |
| MsG0380017595.01.T03 | A0A072V3N8 | 100.000 | 253 | 0 | 0 | 1 | 253 | 280 | 532 | 1.56e-180 | 516 |
| MsG0380017595.01.T04 | A0A2K3MWZ1 | 100.000 | 158 | 0 | 0 | 1 | 158 | 376 | 533 | 2.68e-107 | 325 |
| MsG0380017595.01.T04 | I3SQS9 | 100.000 | 158 | 0 | 0 | 1 | 158 | 1 | 158 | 1.80e-109 | 317 |
| MsG0380017595.01.T05 | I3SQS9 | 100.000 | 94 | 0 | 0 | 1 | 94 | 65 | 158 | 8.44e-60 | 189 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380017595.01 | MsG0380017622.01 | 0.909732 | 4.111808e-82 | 8.113431e-78 |
| MsG0380017595.01 | MsG0880045553.01 | 0.841167 | 5.598275e-58 | 8.156599e-55 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017595.01.T04 | MTR_3g109925 | 100.000 | 158 | 0 | 0 | 1 | 158 | 318 | 475 | 2.00e-111 | 325 |
| MsG0380017595.01.T04 | MTR_3g109925 | 100.000 | 158 | 0 | 0 | 1 | 158 | 375 | 532 | 7.28e-111 | 325 |
| MsG0380017595.01.T04 | MTR_8g105970 | 92.437 | 119 | 9 | 0 | 3 | 121 | 235 | 353 | 3.44e-77 | 234 |
| MsG0380017595.01.T04 | MTR_7g113470 | 37.821 | 156 | 97 | 0 | 1 | 156 | 362 | 517 | 1.54e-32 | 120 |
| MsG0380017595.01.T04 | MTR_3g086330 | 38.710 | 155 | 94 | 1 | 3 | 156 | 377 | 531 | 2.28e-32 | 120 |
| MsG0380017595.01.T04 | MTR_7g067470 | 37.179 | 156 | 98 | 0 | 1 | 156 | 362 | 517 | 6.66e-32 | 119 |
| MsG0380017595.01.T04 | MTR_5g087560 | 36.943 | 157 | 96 | 2 | 2 | 155 | 370 | 526 | 3.02e-27 | 106 |
| MsG0380017595.01.T04 | MTR_2g013540 | 37.419 | 155 | 96 | 1 | 3 | 156 | 221 | 375 | 3.68e-24 | 97.1 |
| MsG0380017595.01.T04 | MTR_2g013540 | 37.419 | 155 | 96 | 1 | 3 | 156 | 370 | 524 | 7.12e-24 | 97.1 |
| MsG0380017595.01.T04 | MTR_8g088270 | 35.443 | 158 | 94 | 1 | 6 | 155 | 377 | 534 | 1.44e-23 | 96.3 |
| MsG0380017595.01.T04 | MTR_1g030650 | 30.719 | 153 | 106 | 0 | 6 | 158 | 374 | 526 | 1.54e-22 | 93.2 |
| MsG0380017595.01.T04 | MTR_6g032870 | 31.373 | 153 | 105 | 0 | 6 | 158 | 371 | 523 | 2.74e-22 | 92.4 |
| MsG0380017595.01.T04 | MTR_4g057020 | 96.667 | 30 | 1 | 0 | 1 | 30 | 101 | 130 | 1.47e-12 | 62.0 |
| MsG0380017595.01.T04 | MTR_7g406870 | 26.144 | 153 | 111 | 2 | 4 | 155 | 374 | 525 | 4.80e-11 | 60.1 |
| MsG0380017595.01.T04 | MTR_7g406870 | 26.144 | 153 | 111 | 2 | 4 | 155 | 262 | 413 | 6.25e-11 | 59.7 |
| MsG0380017595.01.T03 | MTR_3g109925 | 100.000 | 253 | 0 | 0 | 1 | 253 | 280 | 532 | 0.0 | 516 |
| MsG0380017595.01.T03 | MTR_3g109925 | 100.000 | 253 | 0 | 0 | 1 | 253 | 223 | 475 | 0.0 | 514 |
| MsG0380017595.01.T03 | MTR_8g105970 | 74.312 | 218 | 27 | 3 | 1 | 216 | 163 | 353 | 2.67e-105 | 309 |
| MsG0380017595.01.T03 | MTR_7g113470 | 34.199 | 231 | 151 | 1 | 21 | 251 | 288 | 517 | 1.69e-40 | 146 |
| MsG0380017595.01.T03 | MTR_7g067470 | 33.766 | 231 | 152 | 1 | 21 | 251 | 288 | 517 | 6.58e-40 | 144 |
| MsG0380017595.01.T03 | MTR_3g086330 | 32.283 | 254 | 163 | 4 | 1 | 251 | 284 | 531 | 3.32e-35 | 132 |
| MsG0380017595.01.T03 | MTR_8g088270 | 31.179 | 263 | 161 | 4 | 2 | 250 | 278 | 534 | 3.77e-32 | 123 |
| MsG0380017595.01.T03 | MTR_5g087560 | 31.330 | 233 | 156 | 3 | 21 | 250 | 295 | 526 | 1.04e-30 | 119 |
| MsG0380017595.01.T03 | MTR_4g057020 | 57.658 | 111 | 13 | 1 | 15 | 125 | 54 | 130 | 5.20e-30 | 110 |
| MsG0380017595.01.T03 | MTR_6g032870 | 27.200 | 250 | 177 | 1 | 1 | 250 | 276 | 520 | 3.25e-29 | 115 |
| MsG0380017595.01.T03 | MTR_1g030650 | 26.087 | 253 | 182 | 1 | 1 | 253 | 279 | 526 | 6.85e-29 | 114 |
| MsG0380017595.01.T03 | MTR_2g013540 | 32.468 | 231 | 153 | 3 | 23 | 251 | 146 | 375 | 2.72e-28 | 111 |
| MsG0380017595.01.T03 | MTR_2g013540 | 32.468 | 231 | 153 | 3 | 23 | 251 | 295 | 524 | 1.06e-27 | 111 |
| MsG0380017595.01.T03 | MTR_7g406870 | 25.893 | 224 | 163 | 3 | 28 | 250 | 192 | 413 | 3.75e-16 | 77.8 |
| MsG0380017595.01.T03 | MTR_7g406870 | 25.893 | 224 | 163 | 3 | 28 | 250 | 304 | 525 | 3.91e-16 | 77.8 |
| MsG0380017595.01.T01 | MTR_3g109925 | 99.812 | 532 | 1 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1070 |
| MsG0380017595.01.T01 | MTR_3g109925 | 85.150 | 532 | 22 | 5 | 1 | 532 | 1 | 475 | 0.0 | 877 |
| MsG0380017595.01.T01 | MTR_8g105970 | 73.740 | 377 | 39 | 7 | 124 | 495 | 32 | 353 | 0.0 | 520 |
| MsG0380017595.01.T01 | MTR_3g086330 | 37.500 | 512 | 307 | 7 | 24 | 530 | 28 | 531 | 1.67e-103 | 321 |
| MsG0380017595.01.T01 | MTR_7g113470 | 34.816 | 517 | 318 | 7 | 20 | 530 | 14 | 517 | 3.21e-89 | 284 |
| MsG0380017595.01.T01 | MTR_7g067470 | 35.029 | 511 | 313 | 7 | 26 | 530 | 20 | 517 | 1.84e-88 | 282 |
| MsG0380017595.01.T01 | MTR_8g088270 | 34.476 | 525 | 316 | 9 | 24 | 529 | 19 | 534 | 1.06e-84 | 273 |
| MsG0380017595.01.T01 | MTR_5g087560 | 32.877 | 511 | 323 | 8 | 28 | 529 | 27 | 526 | 2.66e-79 | 259 |
| MsG0380017595.01.T01 | MTR_2g013540 | 30.528 | 511 | 344 | 7 | 25 | 530 | 20 | 524 | 7.76e-73 | 242 |
| MsG0380017595.01.T01 | MTR_6g032870 | 28.571 | 511 | 351 | 5 | 23 | 529 | 20 | 520 | 7.70e-69 | 231 |
| MsG0380017595.01.T01 | MTR_1g030650 | 27.626 | 514 | 358 | 5 | 23 | 532 | 23 | 526 | 1.53e-68 | 230 |
| MsG0380017595.01.T01 | MTR_7g406870 | 27.519 | 516 | 347 | 10 | 29 | 529 | 22 | 525 | 1.06e-50 | 182 |
| MsG0380017595.01.T01 | MTR_2g013540 | 28.534 | 382 | 259 | 8 | 154 | 530 | 3 | 375 | 3.11e-35 | 137 |
| MsG0380017595.01.T01 | MTR_4g057020 | 57.658 | 111 | 13 | 1 | 294 | 404 | 54 | 130 | 9.09e-29 | 111 |
| MsG0380017595.01.T01 | MTR_7g406870 | 25.647 | 425 | 289 | 10 | 120 | 529 | 1 | 413 | 1.25e-27 | 115 |
| MsG0380017595.01.T01 | MTR_8g010750 | 25.366 | 410 | 206 | 12 | 27 | 383 | 30 | 392 | 3.82e-14 | 75.1 |
| MsG0380017595.01.T05 | MTR_3g109925 | 100.000 | 94 | 0 | 0 | 1 | 94 | 382 | 475 | 4.27e-61 | 192 |
| MsG0380017595.01.T05 | MTR_3g109925 | 100.000 | 94 | 0 | 0 | 1 | 94 | 439 | 532 | 1.17e-60 | 193 |
| MsG0380017595.01.T05 | MTR_8g105970 | 87.719 | 57 | 7 | 0 | 1 | 57 | 297 | 353 | 2.86e-29 | 107 |
| MsG0380017595.01.T05 | MTR_3g086330 | 38.710 | 93 | 56 | 1 | 1 | 92 | 439 | 531 | 5.86e-16 | 71.6 |
| MsG0380017595.01.T05 | MTR_7g113470 | 34.091 | 88 | 58 | 0 | 5 | 92 | 430 | 517 | 5.11e-14 | 66.2 |
| MsG0380017595.01.T05 | MTR_7g067470 | 32.955 | 88 | 59 | 0 | 5 | 92 | 430 | 517 | 2.43e-13 | 64.3 |
| MsG0380017595.01.T05 | MTR_1g030650 | 31.915 | 94 | 64 | 0 | 1 | 94 | 433 | 526 | 4.50e-13 | 63.5 |
| MsG0380017595.01.T05 | MTR_6g032870 | 32.979 | 94 | 63 | 0 | 1 | 94 | 430 | 523 | 1.43e-12 | 62.0 |
| MsG0380017595.01.T05 | MTR_5g087560 | 34.831 | 89 | 55 | 2 | 6 | 91 | 438 | 526 | 7.97e-11 | 57.0 |
| MsG0380017595.01.T02 | MTR_3g109925 | 100.000 | 484 | 0 | 0 | 1 | 484 | 49 | 532 | 0.0 | 974 |
| MsG0380017595.01.T02 | MTR_3g109925 | 83.884 | 484 | 21 | 5 | 1 | 484 | 49 | 475 | 0.0 | 781 |
| MsG0380017595.01.T02 | MTR_8g105970 | 73.740 | 377 | 39 | 7 | 76 | 447 | 32 | 353 | 0.0 | 520 |
| MsG0380017595.01.T02 | MTR_3g086330 | 36.550 | 487 | 296 | 7 | 1 | 482 | 53 | 531 | 1.22e-92 | 291 |
| MsG0380017595.01.T02 | MTR_7g113470 | 34.631 | 488 | 300 | 7 | 1 | 482 | 43 | 517 | 3.83e-80 | 259 |
| MsG0380017595.01.T02 | MTR_7g067470 | 34.426 | 488 | 301 | 7 | 1 | 482 | 43 | 517 | 1.47e-79 | 257 |
| MsG0380017595.01.T02 | MTR_8g088270 | 33.200 | 500 | 306 | 9 | 1 | 481 | 44 | 534 | 5.30e-73 | 240 |
| MsG0380017595.01.T02 | MTR_5g087560 | 31.633 | 490 | 315 | 8 | 1 | 481 | 48 | 526 | 6.61e-70 | 233 |
| MsG0380017595.01.T02 | MTR_2g013540 | 29.774 | 487 | 331 | 7 | 1 | 482 | 44 | 524 | 5.09e-64 | 217 |
| MsG0380017595.01.T02 | MTR_1g030650 | 26.844 | 488 | 343 | 5 | 1 | 484 | 49 | 526 | 7.81e-62 | 211 |
| MsG0380017595.01.T02 | MTR_6g032870 | 27.835 | 485 | 336 | 5 | 1 | 481 | 46 | 520 | 1.29e-61 | 210 |
| MsG0380017595.01.T02 | MTR_7g406870 | 26.923 | 494 | 334 | 10 | 3 | 481 | 44 | 525 | 1.83e-44 | 164 |
| MsG0380017595.01.T02 | MTR_2g013540 | 28.534 | 382 | 259 | 8 | 106 | 482 | 3 | 375 | 1.79e-35 | 136 |
| MsG0380017595.01.T02 | MTR_4g057020 | 57.658 | 111 | 13 | 1 | 246 | 356 | 54 | 130 | 8.46e-29 | 111 |
| MsG0380017595.01.T02 | MTR_7g406870 | 25.647 | 425 | 289 | 10 | 72 | 481 | 1 | 413 | 7.87e-28 | 115 |
| MsG0380017595.01.T02 | MTR_8g010750 | 24.675 | 385 | 211 | 12 | 4 | 335 | 34 | 392 | 6.92e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017595.01.T04 | AT3G18190 | 93.038 | 158 | 11 | 0 | 1 | 158 | 379 | 536 | 5.18e-105 | 310 |
| MsG0380017595.01.T04 | AT1G24510 | 42.949 | 156 | 88 | 1 | 2 | 156 | 300 | 455 | 1.21e-35 | 128 |
| MsG0380017595.01.T04 | AT1G24510 | 42.949 | 156 | 88 | 1 | 2 | 156 | 323 | 478 | 1.26e-35 | 129 |
| MsG0380017595.01.T04 | AT1G24510 | 43.226 | 155 | 87 | 1 | 3 | 156 | 377 | 531 | 2.06e-35 | 129 |
| MsG0380017595.01.T04 | AT5G20890 | 37.821 | 156 | 97 | 0 | 1 | 156 | 362 | 517 | 4.30e-31 | 117 |
| MsG0380017595.01.T04 | AT3G11830 | 36.306 | 157 | 97 | 2 | 2 | 155 | 370 | 526 | 3.29e-27 | 106 |
| MsG0380017595.01.T04 | AT3G11830 | 36.306 | 157 | 95 | 3 | 2 | 155 | 370 | 524 | 1.42e-25 | 102 |
| MsG0380017595.01.T04 | AT3G20050 | 36.709 | 158 | 92 | 1 | 6 | 155 | 377 | 534 | 1.71e-24 | 99.0 |
| MsG0380017595.01.T04 | AT3G03960 | 31.169 | 154 | 106 | 0 | 5 | 158 | 376 | 529 | 2.06e-23 | 95.9 |
| MsG0380017595.01.T04 | AT5G26360 | 37.419 | 155 | 96 | 1 | 3 | 156 | 370 | 524 | 1.72e-21 | 90.1 |
| MsG0380017595.01.T04 | AT5G16070 | 30.323 | 155 | 94 | 5 | 4 | 146 | 373 | 525 | 3.76e-12 | 63.5 |
| MsG0380017595.01.T04 | AT3G02530 | 29.221 | 154 | 97 | 4 | 4 | 146 | 374 | 526 | 1.89e-11 | 61.6 |
| MsG0380017595.01.T03 | AT3G18190 | 93.281 | 253 | 17 | 0 | 1 | 253 | 284 | 536 | 1.21e-174 | 492 |
| MsG0380017595.01.T03 | AT1G24510 | 35.433 | 254 | 155 | 4 | 1 | 251 | 208 | 455 | 8.08e-39 | 140 |
| MsG0380017595.01.T03 | AT1G24510 | 35.433 | 254 | 155 | 4 | 1 | 251 | 231 | 478 | 1.45e-38 | 140 |
| MsG0380017595.01.T03 | AT1G24510 | 35.433 | 254 | 155 | 4 | 1 | 251 | 284 | 531 | 2.63e-38 | 140 |
| MsG0380017595.01.T03 | AT5G20890 | 33.333 | 231 | 153 | 1 | 21 | 251 | 288 | 517 | 2.71e-37 | 137 |
| MsG0380017595.01.T03 | AT3G20050 | 31.939 | 263 | 159 | 4 | 2 | 250 | 278 | 534 | 6.36e-33 | 125 |
| MsG0380017595.01.T03 | AT3G11830 | 31.330 | 233 | 156 | 3 | 21 | 250 | 295 | 526 | 1.58e-30 | 119 |
| MsG0380017595.01.T03 | AT3G03960 | 28.346 | 254 | 175 | 3 | 1 | 253 | 282 | 529 | 2.64e-29 | 115 |
| MsG0380017595.01.T03 | AT3G11830 | 31.330 | 233 | 154 | 4 | 21 | 250 | 295 | 524 | 5.79e-29 | 115 |
| MsG0380017595.01.T03 | AT5G26360 | 32.340 | 235 | 156 | 3 | 19 | 251 | 291 | 524 | 5.79e-26 | 106 |
| MsG0380017595.01.T03 | AT5G16070 | 27.490 | 251 | 163 | 7 | 3 | 241 | 282 | 525 | 1.69e-17 | 82.0 |
| MsG0380017595.01.T03 | AT3G02530 | 27.632 | 228 | 152 | 5 | 12 | 233 | 293 | 513 | 4.77e-16 | 77.8 |
| MsG0380017595.01.T01 | AT3G18190 | 87.873 | 536 | 61 | 1 | 1 | 532 | 1 | 536 | 0.0 | 964 |
| MsG0380017595.01.T01 | AT1G24510 | 38.447 | 515 | 304 | 7 | 21 | 530 | 25 | 531 | 2.19e-104 | 323 |
| MsG0380017595.01.T01 | AT1G24510 | 37.553 | 474 | 283 | 7 | 62 | 530 | 13 | 478 | 1.84e-89 | 283 |
| MsG0380017595.01.T01 | AT1G24510 | 36.933 | 463 | 279 | 7 | 73 | 530 | 1 | 455 | 9.46e-84 | 268 |
| MsG0380017595.01.T01 | AT3G20050 | 33.898 | 531 | 323 | 9 | 18 | 529 | 13 | 534 | 9.28e-83 | 268 |
| MsG0380017595.01.T01 | AT5G20890 | 33.656 | 517 | 324 | 7 | 20 | 530 | 14 | 517 | 6.93e-82 | 265 |
| MsG0380017595.01.T01 | AT3G11830 | 32.485 | 511 | 325 | 7 | 28 | 529 | 27 | 526 | 1.78e-76 | 251 |
| MsG0380017595.01.T01 | AT3G11830 | 32.485 | 511 | 323 | 8 | 28 | 529 | 27 | 524 | 1.05e-74 | 247 |
| MsG0380017595.01.T01 | AT3G03960 | 28.817 | 524 | 357 | 7 | 14 | 532 | 17 | 529 | 1.04e-71 | 239 |
| MsG0380017595.01.T01 | AT5G26360 | 31.311 | 511 | 340 | 7 | 25 | 530 | 20 | 524 | 2.61e-71 | 238 |
| MsG0380017595.01.T01 | AT5G16070 | 29.594 | 517 | 324 | 13 | 30 | 520 | 23 | 525 | 7.04e-53 | 188 |
| MsG0380017595.01.T01 | AT3G02530 | 28.794 | 514 | 333 | 11 | 30 | 520 | 23 | 526 | 3.35e-51 | 183 |
| MsG0380017595.01.T05 | AT3G18190 | 92.553 | 94 | 7 | 0 | 1 | 94 | 443 | 536 | 2.73e-57 | 184 |
| MsG0380017595.01.T05 | AT1G24510 | 43.011 | 93 | 52 | 1 | 1 | 92 | 386 | 478 | 2.82e-17 | 75.5 |
| MsG0380017595.01.T05 | AT1G24510 | 43.011 | 93 | 52 | 1 | 1 | 92 | 363 | 455 | 2.90e-17 | 75.5 |
| MsG0380017595.01.T05 | AT1G24510 | 43.011 | 93 | 52 | 1 | 1 | 92 | 439 | 531 | 2.97e-17 | 75.5 |
| MsG0380017595.01.T05 | AT5G20890 | 35.955 | 89 | 57 | 0 | 4 | 92 | 429 | 517 | 9.15e-14 | 65.5 |
| MsG0380017595.01.T05 | AT3G03960 | 30.851 | 94 | 65 | 0 | 1 | 94 | 436 | 529 | 1.69e-12 | 62.0 |
| MsG0380017595.01.T05 | AT3G11830 | 35.955 | 89 | 54 | 2 | 6 | 91 | 436 | 524 | 7.14e-11 | 57.4 |
| MsG0380017595.01.T05 | AT3G11830 | 35.955 | 89 | 54 | 2 | 6 | 91 | 438 | 526 | 7.57e-11 | 57.4 |
| MsG0380017595.01.T02 | AT3G18190 | 90.909 | 484 | 44 | 0 | 1 | 484 | 53 | 536 | 0.0 | 904 |
| MsG0380017595.01.T02 | AT1G24510 | 37.782 | 487 | 290 | 7 | 1 | 482 | 53 | 531 | 4.73e-94 | 295 |
| MsG0380017595.01.T02 | AT1G24510 | 37.553 | 474 | 283 | 7 | 14 | 482 | 13 | 478 | 2.99e-90 | 284 |
| MsG0380017595.01.T02 | AT1G24510 | 36.933 | 463 | 279 | 7 | 25 | 482 | 1 | 455 | 2.71e-84 | 268 |
| MsG0380017595.01.T02 | AT5G20890 | 34.016 | 488 | 303 | 7 | 1 | 482 | 43 | 517 | 4.13e-74 | 243 |
| MsG0380017595.01.T02 | AT3G20050 | 33.000 | 500 | 307 | 9 | 1 | 481 | 44 | 534 | 2.44e-71 | 236 |
| MsG0380017595.01.T02 | AT3G11830 | 31.429 | 490 | 316 | 7 | 1 | 481 | 48 | 526 | 5.88e-68 | 228 |
| MsG0380017595.01.T02 | AT3G11830 | 31.429 | 490 | 314 | 8 | 1 | 481 | 48 | 524 | 4.81e-66 | 223 |
| MsG0380017595.01.T02 | AT3G03960 | 28.221 | 489 | 335 | 7 | 1 | 484 | 52 | 529 | 1.67e-64 | 218 |
| MsG0380017595.01.T02 | AT5G26360 | 30.595 | 487 | 327 | 7 | 1 | 482 | 44 | 524 | 1.11e-62 | 213 |
| MsG0380017595.01.T02 | AT5G16070 | 29.234 | 496 | 311 | 13 | 3 | 472 | 44 | 525 | 3.01e-47 | 171 |
| MsG0380017595.01.T02 | AT3G02530 | 28.333 | 480 | 316 | 10 | 3 | 464 | 44 | 513 | 9.20e-46 | 167 |
Find 119 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAGATTGTGAAGATTTC+TGG | 0.204894 | 3:+98285283 | MsG0380017595.01.T01:CDS |
| TGTGAAGATTTCTGGTATTA+AGG | 0.209465 | 3:+98285291 | MsG0380017595.01.T01:CDS |
| TCTTGCTAAAGCTAAGATTT+TGG | 0.234466 | 3:+98285123 | MsG0380017595.01.T01:CDS |
| GATTTCTGGTATTAAGGATA+TGG | 0.239423 | 3:+98285297 | MsG0380017595.01.T01:CDS |
| ATCGTCTTTGCGTTTGTTAT+CGG | 0.257624 | 3:-98284243 | None:intergenic |
| AGGGATGATTAAGAAGATTA+AGG | 0.275419 | 3:+98285027 | MsG0380017595.01.T01:CDS |
| GCATTCTCAGCAAGGGTATA+TGG | 0.307049 | 3:-98285556 | None:intergenic |
| CTCTGTTCTATATCCGTCTT+AGG | 0.334855 | 3:-98284941 | None:intergenic |
| CTTGTGGAAGAGCTTTCTCT+TGG | 0.336541 | 3:+98285256 | MsG0380017595.01.T01:CDS |
| TCACGGAGATCCACCATTTC+CGG | 0.339036 | 3:-98284767 | None:intergenic |
| AGCAGCGGAGTCTTGAGATT+TGG | 0.347607 | 3:-98284453 | None:intergenic |
| TGTCAAGGCAATTGGGTGCT+TGG | 0.354279 | 3:+98285467 | MsG0380017595.01.T01:CDS |
| ATCGGTGTAGGATTCGGTTT+TGG | 0.362816 | 3:-98284225 | None:intergenic |
| TCTCACCGCCATGGCTGTTC+CGG | 0.362983 | 3:+98284610 | MsG0380017595.01.T01:CDS |
| GATAGAGCTGTCAAGGCAAT+TGG | 0.370145 | 3:+98285459 | MsG0380017595.01.T01:CDS |
| TTGTGGAAGAGCTTTCTCTT+GGG | 0.371995 | 3:+98285257 | MsG0380017595.01.T01:CDS |
| ATGATGCTTTGTGTGTTGTT+AGG | 0.372583 | 3:+98285389 | MsG0380017595.01.T01:CDS |
| TTTGTTATCGGTGTAGGATT+CGG | 0.375261 | 3:-98284231 | None:intergenic |
| CATACCTTTGGGGCCGAGAC+TGG | 0.392090 | 3:-98284318 | None:intergenic |
| AATCTTAGCATTCTCCATTC+TGG | 0.394765 | 3:-98284891 | None:intergenic |
| GGAGGATCGGTGAGGGGCTG+CGG | 0.401126 | 3:-98284204 | None:intergenic |
| GTCAAGGCAATTGGGTGCTT+GGG | 0.415529 | 3:+98285468 | MsG0380017595.01.T01:CDS |
| CGATCCCGCTAGGCCGGAAA+TGG | 0.417675 | 3:+98284754 | MsG0380017595.01.T01:CDS |
| AGAACTGAATCAACAGCAAT+AGG | 0.421556 | 3:-98284722 | None:intergenic |
| AGCTCAGTAACAATTGCAAT+CGG | 0.423035 | 3:-98285589 | None:intergenic |
| TTTGTGTGTTGTTAGGTGTT+TGG | 0.427682 | 3:+98285396 | MsG0380017595.01.T01:CDS |
| AAATGCTCAATATTAGCAAT+AGG | 0.434996 | 3:-98285205 | None:intergenic |
| ATTTCTGGTATTAAGGATAT+GGG | 0.441434 | 3:+98285298 | MsG0380017595.01.T01:CDS |
| TTTGCGTTTGTTATCGGTGT+AGG | 0.444094 | 3:-98284237 | None:intergenic |
| TAGCACTTCGTTGAATAGTA+AGG | 0.456781 | 3:+98284670 | MsG0380017595.01.T01:CDS |
| TCACGATCAGTGAGTTCAAC+CGG | 0.461390 | 3:-98284629 | None:intergenic |
| AACGCCGTTCGCACCAGTCT+CGG | 0.462746 | 3:+98284305 | MsG0380017595.01.T01:CDS |
| ACCACAACTGTGCTTGTTCG+TGG | 0.463002 | 3:+98285325 | MsG0380017595.01.T01:CDS |
| TACTGAGCTTGTGAAGGGCT+TGG | 0.463815 | 3:+98284829 | MsG0380017595.01.T01:CDS |
| GTGATTATTCTCAGATGGAT+AGG | 0.464278 | 3:+98284975 | MsG0380017595.01.T01:CDS |
| CAAGACTCCGCTGCTGGTGA+TGG | 0.468281 | 3:+98284461 | MsG0380017595.01.T01:CDS |
| ATTAAGAAGATTAAGGCAAC+CGG | 0.476085 | 3:+98285034 | MsG0380017595.01.T01:CDS |
| GAATGTGGTGCAGCCATTGC+TGG | 0.481414 | 3:+98285690 | MsG0380017595.01.T01:CDS |
| GAAGAGCTTTCTCTTGGGGA+TGG | 0.486289 | 3:+98285262 | MsG0380017595.01.T01:CDS |
| TCCACCATTTCCGGCCTAGC+GGG | 0.488011 | 3:-98284758 | None:intergenic |
| GCAATTGGGTGCTTGGGCTA+AGG | 0.488468 | 3:+98285474 | MsG0380017595.01.T01:CDS |
| AGGCAAACAATTAAGAGTCT+TGG | 0.489277 | 3:-98285185 | None:intergenic |
| TGTCTCCTCCTTCTCTCTCA+TGG | 0.491398 | 3:+98284527 | MsG0380017595.01.T01:CDS |
| TGTGGAAGAGCTTTCTCTTG+GGG | 0.491536 | 3:+98285258 | MsG0380017595.01.T01:CDS |
| TATACCCTTGCTGAGAATGC+AGG | 0.493053 | 3:+98285559 | MsG0380017595.01.T01:CDS |
| CAGTCTCGGCCCCAAAGGTA+TGG | 0.493521 | 3:+98284319 | MsG0380017595.01.T01:CDS |
| AATCAACAACACATTACAAC+CGG | 0.494792 | 3:-98285053 | None:intergenic |
| CTGAGGAATCGTCATGCTAA+AGG | 0.500255 | 3:+98285610 | MsG0380017595.01.T01:CDS |
| AACGGCGTTAGCGACGGAAC+GGG | 0.500736 | 3:-98284291 | None:intergenic |
| TGTCATCGATCCCGCTAGGC+CGG | 0.501041 | 3:+98284748 | MsG0380017595.01.T01:CDS |
| TCAACACTGGAATCAATGTC+AGG | 0.507995 | 3:+98285638 | MsG0380017595.01.T01:CDS |
| AAATCTCAAGACTCCGCTGC+TGG | 0.512750 | 3:+98284455 | MsG0380017595.01.T01:CDS |
| ATAGAGCTGTCAAGGCAATT+GGG | 0.513984 | 3:+98285460 | MsG0380017595.01.T01:CDS |
| GATTGCAGGTGGTGGTGCTC+CGG | 0.514051 | 3:+98285435 | MsG0380017595.01.T01:CDS |
| TGCCTTGACAGCTCTATCTC+CGG | 0.516484 | 3:-98285454 | None:intergenic |
| GTTGGTGATGATAACTTCGT+TGG | 0.525584 | 3:-98284363 | None:intergenic |
| GGAACGGGCGGCGATGATGT+TGG | 0.529719 | 3:-98284276 | None:intergenic |
| TCCCGCTAGGCCGGAAATGG+TGG | 0.531201 | 3:+98284757 | MsG0380017595.01.T01:CDS |
| AAGAGCTTTCTCTTGGGGAT+GGG | 0.531234 | 3:+98285263 | MsG0380017595.01.T01:CDS |
| AACTTGCATCTTGTTGAGGA+TGG | 0.540091 | 3:-98284396 | None:intergenic |
| GGTTAGTGATTATTCTCAGA+TGG | 0.543811 | 3:+98284970 | MsG0380017595.01.T01:CDS |
| TCAGATTTCACCTCCTAAGA+CGG | 0.551329 | 3:+98284928 | MsG0380017595.01.T01:CDS |
| ACATTTCTCGAGAAGTGCTC+CGG | 0.552049 | 3:-98284507 | None:intergenic |
| CTGTATTCGTGCATTTGCTG+AGG | 0.558420 | 3:+98285519 | MsG0380017595.01.T01:CDS |
| GATGAATACCATGAGAGAGA+AGG | 0.558756 | 3:-98284535 | None:intergenic |
| CGGCGATGATGTTGGATTGA+CGG | 0.559941 | 3:-98284268 | None:intergenic |
| GATGATAACTTCGTTGGAAG+AGG | 0.560445 | 3:-98284357 | None:intergenic |
| GAATACCATGAGAGAGAAGG+AGG | 0.561831 | 3:-98284532 | None:intergenic |
| CTCCGGAGATAGAGCTGTCA+AGG | 0.563162 | 3:+98285452 | MsG0380017595.01.T01:CDS |
| GAACGGCGTTAGCGACGGAA+CGG | 0.564350 | 3:-98284292 | None:intergenic |
| GGGGCCGAGACTGGTGCGAA+CGG | 0.565754 | 3:-98284309 | None:intergenic |
| AAGGTTAGTCATGCTGCTGG+TGG | 0.570337 | 3:+98284863 | MsG0380017595.01.T01:CDS |
| GGCGATGACAACAACGGTGG+TGG | 0.571260 | 3:-98284486 | None:intergenic |
| CGCACCAGTCTCGGCCCCAA+AGG | 0.572245 | 3:+98284314 | MsG0380017595.01.T01:CDS |
| CCTCACACACTCTGTTGCCA+AGG | 0.573445 | 3:-98285731 | None:intergenic |
| GCTCAGTAACAATTGCAATC+GGG | 0.575791 | 3:-98285588 | None:intergenic |
| TCTCTGTCATCGATCCCGCT+AGG | 0.576821 | 3:+98284744 | MsG0380017595.01.T01:CDS |
| ACCACCGTTGTTGTCATCGC+CGG | 0.577312 | 3:+98284488 | MsG0380017595.01.T01:CDS |
| GAAGAACTTGCATCTTGTTG+AGG | 0.580248 | 3:-98284400 | None:intergenic |
| GGCGTTAGCGACGGAACGGG+CGG | 0.589560 | 3:-98284288 | None:intergenic |
| GTTGGGTTATGCTGATCTTG+TGG | 0.590393 | 3:+98285240 | MsG0380017595.01.T01:CDS |
| GGTGGTTCCATCACCAGCAG+CGG | 0.591723 | 3:-98284468 | None:intergenic |
| GCACTTGTGCTAACCAGCAA+TGG | 0.592202 | 3:-98285703 | None:intergenic |
| TCAAACCTGCATTCTCAGCA+AGG | 0.593910 | 3:-98285564 | None:intergenic |
| GAGTTCAACCGGAACAGCCA+TGG | 0.594130 | 3:-98284618 | None:intergenic |
| GGTGCGAACGGCGTTAGCGA+CGG | 0.594895 | 3:-98284297 | None:intergenic |
| TGATGATACTGAGCTTGTGA+AGG | 0.595971 | 3:+98284823 | MsG0380017595.01.T01:CDS |
| TTAGCATTCTCCATTCTGGT+AGG | 0.596904 | 3:-98284887 | None:intergenic |
| ACACTCTGTTGCCAAGGTGA+TGG | 0.598855 | 3:-98285725 | None:intergenic |
| TGCTGGTGGACCTACCAGAA+TGG | 0.600235 | 3:+98284877 | MsG0380017595.01.T01:CDS |
| GCTAAAGGTGAGATCAACAC+TGG | 0.604820 | 3:+98285625 | MsG0380017595.01.T01:CDS |
| GAGGATGGTAGCGCCGTCGT+TGG | 0.607730 | 3:-98284381 | None:intergenic |
| GATGATACTGAGCTTGTGAA+GGG | 0.610892 | 3:+98284824 | MsG0380017595.01.T01:CDS |
| TGTTCTATATCCGTCTTAGG+AGG | 0.611514 | 3:-98284938 | None:intergenic |
| TTGCAATTGTTACTGAGCTG+AGG | 0.612866 | 3:+98285593 | MsG0380017595.01.T01:CDS |
| TCCACGAACAAGCACAGTTG+TGG | 0.612984 | 3:-98285326 | None:intergenic |
| GCTGCACCACATTCTCCTCA+AGG | 0.613760 | 3:-98285681 | None:intergenic |
| ATGCAAAGACAAATCAGTAA+CGG | 0.617235 | 3:-98285098 | None:intergenic |
| TAGCACAAGTGCCATCACCT+TGG | 0.618089 | 3:+98285714 | MsG0380017595.01.T01:CDS |
| TCAAATTACAAACATCCTTG+AGG | 0.621720 | 3:+98285666 | MsG0380017595.01.T01:CDS |
| AAGAAGGTTAGTCATGCTGC+TGG | 0.624743 | 3:+98284860 | MsG0380017595.01.T01:CDS |
| ACTGGAATCAATGTCAGGAA+AGG | 0.625427 | 3:+98285643 | MsG0380017595.01.T01:CDS |
| AGTGAATCAGAGATAACAGT+AGG | 0.627838 | 3:-98284557 | None:intergenic |
| AAACATCCTTGAGGAGAATG+TGG | 0.628033 | 3:+98285675 | MsG0380017595.01.T01:CDS |
| TCTTAACAATCTTCACATCA+CGG | 0.628490 | 3:-98284784 | None:intergenic |
| TGTTGATGTTCTCACCGCCA+TGG | 0.628840 | 3:+98284601 | MsG0380017595.01.T01:CDS |
| AACATCAACAGCTTTAACAG+AGG | 0.629483 | 3:-98284588 | None:intergenic |
| GTGAAGATTGTTAAGAAGCT+CGG | 0.630785 | 3:+98284791 | MsG0380017595.01.T01:CDS |
| TTAGGTGTTTGGTTGCCAAG+AGG | 0.631658 | 3:+98285407 | MsG0380017595.01.T01:CDS |
| ATCCACCATTTCCGGCCTAG+CGG | 0.644279 | 3:-98284759 | None:intergenic |
| CCTTGGCAACAGAGTGTGTG+AGG | 0.652881 | 3:+98285731 | MsG0380017595.01.T01:CDS |
| CAAACCTGCATTCTCAGCAA+GGG | 0.653006 | 3:-98285563 | None:intergenic |
| GGATATAGAACAGAGTATTG+TGG | 0.674097 | 3:+98284949 | MsG0380017595.01.T01:CDS |
| GAAGTTATCATCACCAACGA+CGG | 0.680075 | 3:+98284368 | MsG0380017595.01.T01:CDS |
| TTCAACCGGAACAGCCATGG+CGG | 0.690129 | 3:-98284615 | None:intergenic |
| AAGATTGTTAAGAAGCTCGG+TGG | 0.695277 | 3:+98284794 | MsG0380017595.01.T01:CDS |
| TGCTCCGGCGATGACAACAA+CGG | 0.714797 | 3:-98284492 | None:intergenic |
| TCCGGCGATGACAACAACGG+TGG | 0.732056 | 3:-98284489 | None:intergenic |
| TTGATGATATTGTAACTGTG+AGG | 0.759737 | 3:+98285767 | MsG0380017595.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATGCTCAATATTAGCAAT+AGG | - | Chr3:98285208-98285227 | None:intergenic | 25.0% |
| !!! | ATTTCTGGTATTAAGGATAT+GGG | + | Chr3:98285298-98285317 | MsG0380017595.01.T01:CDS | 25.0% |
| AATCAACAACACATTACAAC+CGG | - | Chr3:98285056-98285075 | None:intergenic | 30.0% | |
| AGGGATGATTAAGAAGATTA+AGG | + | Chr3:98285027-98285046 | MsG0380017595.01.T01:CDS | 30.0% | |
| ATGCAAAGACAAATCAGTAA+CGG | - | Chr3:98285101-98285120 | None:intergenic | 30.0% | |
| ATTAAGAAGATTAAGGCAAC+CGG | + | Chr3:98285034-98285053 | MsG0380017595.01.T01:CDS | 30.0% | |
| TCAAATTACAAACATCCTTG+AGG | + | Chr3:98285666-98285685 | MsG0380017595.01.T01:CDS | 30.0% | |
| TCTTAACAATCTTCACATCA+CGG | - | Chr3:98284787-98284806 | None:intergenic | 30.0% | |
| ! | AAGAGAGGAGTTACATTTTA+GGG | + | Chr3:98285008-98285027 | MsG0380017595.01.T01:CDS | 30.0% |
| ! | ATCATTTTGTCCATACCTTT+GGG | - | Chr3:98284332-98284351 | None:intergenic | 30.0% |
| ! | TCTTGCTAAAGCTAAGATTT+TGG | + | Chr3:98285123-98285142 | MsG0380017595.01.T01:CDS | 30.0% |
| ! | TTGATGATATTGTAACTGTG+AGG | + | Chr3:98285767-98285786 | MsG0380017595.01.T01:CDS | 30.0% |
| !! | GATTTCTGGTATTAAGGATA+TGG | + | Chr3:98285297-98285316 | MsG0380017595.01.T01:CDS | 30.0% |
| !! | TGTGAAGATTTCTGGTATTA+AGG | + | Chr3:98285291-98285310 | MsG0380017595.01.T01:CDS | 30.0% |
| AATCTTAGCATTCTCCATTC+TGG | - | Chr3:98284894-98284913 | None:intergenic | 35.0% | |
| AGAACTGAATCAACAGCAAT+AGG | - | Chr3:98284725-98284744 | None:intergenic | 35.0% | |
| AGCTCAGTAACAATTGCAAT+CGG | - | Chr3:98285592-98285611 | None:intergenic | 35.0% | |
| AGGCAAACAATTAAGAGTCT+TGG | - | Chr3:98285188-98285207 | None:intergenic | 35.0% | |
| AGTGAATCAGAGATAACAGT+AGG | - | Chr3:98284560-98284579 | None:intergenic | 35.0% | |
| GGTTAGTGATTATTCTCAGA+TGG | + | Chr3:98284970-98284989 | MsG0380017595.01.T01:CDS | 35.0% | |
| GTGAAGATTGTTAAGAAGCT+CGG | + | Chr3:98284791-98284810 | MsG0380017595.01.T01:CDS | 35.0% | |
| GTGATTATTCTCAGATGGAT+AGG | + | Chr3:98284975-98284994 | MsG0380017595.01.T01:CDS | 35.0% | |
| TAGCACTTCGTTGAATAGTA+AGG | + | Chr3:98284670-98284689 | MsG0380017595.01.T01:CDS | 35.0% | |
| ! | AACATCAACAGCTTTAACAG+AGG | - | Chr3:98284591-98284610 | None:intergenic | 35.0% |
| ! | ATGATGCTTTGTGTGTTGTT+AGG | + | Chr3:98285389-98285408 | MsG0380017595.01.T01:CDS | 35.0% |
| ! | GAAGAGAGGAGTTACATTTT+AGG | + | Chr3:98285007-98285026 | MsG0380017595.01.T01:CDS | 35.0% |
| ! | GATCATTTTGTCCATACCTT+TGG | - | Chr3:98284333-98284352 | None:intergenic | 35.0% |
| ! | TCAGATGGATAGGATTTTGA+AGG | + | Chr3:98284985-98285004 | MsG0380017595.01.T01:CDS | 35.0% |
| ! | TCATTTTGTCCATACCTTTG+GGG | - | Chr3:98284331-98284350 | None:intergenic | 35.0% |
| ! | TTTGTGTGTTGTTAGGTGTT+TGG | + | Chr3:98285396-98285415 | MsG0380017595.01.T01:CDS | 35.0% |
| ! | TTTGTTATCGGTGTAGGATT+CGG | - | Chr3:98284234-98284253 | None:intergenic | 35.0% |
| !! | ATAGGATTTTGAAGGAAGAG+AGG | + | Chr3:98284993-98285012 | MsG0380017595.01.T01:CDS | 35.0% |
| !! | ATCGTCTTTGCGTTTGTTAT+CGG | - | Chr3:98284246-98284265 | None:intergenic | 35.0% |
| !! | GGATATAGAACAGAGTATTG+TGG | + | Chr3:98284949-98284968 | MsG0380017595.01.T01:CDS | 35.0% |
| AAACATCCTTGAGGAGAATG+TGG | + | Chr3:98285675-98285694 | MsG0380017595.01.T01:CDS | 40.0% | |
| AACTTGCATCTTGTTGAGGA+TGG | - | Chr3:98284399-98284418 | None:intergenic | 40.0% | |
| AAGATTGTTAAGAAGCTCGG+TGG | + | Chr3:98284794-98284813 | MsG0380017595.01.T01:CDS | 40.0% | |
| ACCTGCAATCAAAAACCTCT+TGG | - | Chr3:98285425-98285444 | None:intergenic | 40.0% | |
| ACTGGAATCAATGTCAGGAA+AGG | + | Chr3:98285643-98285662 | MsG0380017595.01.T01:CDS | 40.0% | |
| ATAGAGCTGTCAAGGCAATT+GGG | + | Chr3:98285460-98285479 | MsG0380017595.01.T01:CDS | 40.0% | |
| CTCTGTTCTATATCCGTCTT+AGG | - | Chr3:98284944-98284963 | None:intergenic | 40.0% | |
| GAAGAACTTGCATCTTGTTG+AGG | - | Chr3:98284403-98284422 | None:intergenic | 40.0% | |
| GAAGTTATCATCACCAACGA+CGG | + | Chr3:98284368-98284387 | MsG0380017595.01.T01:CDS | 40.0% | |
| GATGAATACCATGAGAGAGA+AGG | - | Chr3:98284538-98284557 | None:intergenic | 40.0% | |
| GATGATAACTTCGTTGGAAG+AGG | - | Chr3:98284360-98284379 | None:intergenic | 40.0% | |
| GATGATACTGAGCTTGTGAA+GGG | + | Chr3:98284824-98284843 | MsG0380017595.01.T01:CDS | 40.0% | |
| GCTCAGTAACAATTGCAATC+GGG | - | Chr3:98285591-98285610 | None:intergenic | 40.0% | |
| GGGAAGATTGTGAAGATTTC+TGG | + | Chr3:98285283-98285302 | MsG0380017595.01.T01:CDS | 40.0% | |
| TCAACACTGGAATCAATGTC+AGG | + | Chr3:98285638-98285657 | MsG0380017595.01.T01:CDS | 40.0% | |
| TCAGATTTCACCTCCTAAGA+CGG | + | Chr3:98284928-98284947 | MsG0380017595.01.T01:CDS | 40.0% | |
| TGATGATACTGAGCTTGTGA+AGG | + | Chr3:98284823-98284842 | MsG0380017595.01.T01:CDS | 40.0% | |
| TGTTCTATATCCGTCTTAGG+AGG | - | Chr3:98284941-98284960 | None:intergenic | 40.0% | |
| TTAGCATTCTCCATTCTGGT+AGG | - | Chr3:98284890-98284909 | None:intergenic | 40.0% | |
| TTGCAATTGTTACTGAGCTG+AGG | + | Chr3:98285593-98285612 | MsG0380017595.01.T01:CDS | 40.0% | |
| TTGTGGAAGAGCTTTCTCTT+GGG | + | Chr3:98285257-98285276 | MsG0380017595.01.T01:CDS | 40.0% | |
| ! | CATTTTCGTGCTGAGAAGTT+GGG | + | Chr3:98285223-98285242 | MsG0380017595.01.T01:CDS | 40.0% |
| ! | GAGTTCAACGAGCATTTTAG+CGG | - | Chr3:98284432-98284451 | None:intergenic | 40.0% |
| !! | AAGAGGTTTTTGATTGCAGG+TGG | + | Chr3:98285424-98285443 | MsG0380017595.01.T01:CDS | 40.0% |
| !! | GGGCTTGGTTTTTGATAAGA+AGG | + | Chr3:98284844-98284863 | MsG0380017595.01.T01:CDS | 40.0% |
| !! | GTTGGTGATGATAACTTCGT+TGG | - | Chr3:98284366-98284385 | None:intergenic | 40.0% |
| !! | TTTGCGTTTGTTATCGGTGT+AGG | - | Chr3:98284240-98284259 | None:intergenic | 40.0% |
| AAGAGCTTTCTCTTGGGGAT+GGG | + | Chr3:98285263-98285282 | MsG0380017595.01.T01:CDS | 45.0% | |
| CAAACCTGCATTCTCAGCAA+GGG | - | Chr3:98285566-98285585 | None:intergenic | 45.0% | |
| CTGAGGAATCGTCATGCTAA+AGG | + | Chr3:98285610-98285629 | MsG0380017595.01.T01:CDS | 45.0% | |
| CTTGTGGAAGAGCTTTCTCT+TGG | + | Chr3:98285256-98285275 | MsG0380017595.01.T01:CDS | 45.0% | |
| GAATACCATGAGAGAGAAGG+AGG | - | Chr3:98284535-98284554 | None:intergenic | 45.0% | |
| GATAGAGCTGTCAAGGCAAT+TGG | + | Chr3:98285459-98285478 | MsG0380017595.01.T01:CDS | 45.0% | |
| GCTAAAGGTGAGATCAACAC+TGG | + | Chr3:98285625-98285644 | MsG0380017595.01.T01:CDS | 45.0% | |
| GTTGGGTTATGCTGATCTTG+TGG | + | Chr3:98285240-98285259 | MsG0380017595.01.T01:CDS | 45.0% | |
| TATACCCTTGCTGAGAATGC+AGG | + | Chr3:98285559-98285578 | MsG0380017595.01.T01:CDS | 45.0% | |
| TCAAACCTGCATTCTCAGCA+AGG | - | Chr3:98285567-98285586 | None:intergenic | 45.0% | |
| TCACGATCAGTGAGTTCAAC+CGG | - | Chr3:98284632-98284651 | None:intergenic | 45.0% | |
| TGTGGAAGAGCTTTCTCTTG+GGG | + | Chr3:98285258-98285277 | MsG0380017595.01.T01:CDS | 45.0% | |
| TTAGGTGTTTGGTTGCCAAG+AGG | + | Chr3:98285407-98285426 | MsG0380017595.01.T01:CDS | 45.0% | |
| ! | AAGAAGGTTAGTCATGCTGC+TGG | + | Chr3:98284860-98284879 | MsG0380017595.01.T01:CDS | 45.0% |
| ! | AAGGTTTTGCATGGGATGGA+GGG | + | Chr3:98285493-98285512 | MsG0380017595.01.T01:CDS | 45.0% |
| ! | CTGTATTCGTGCATTTGCTG+AGG | + | Chr3:98285519-98285538 | MsG0380017595.01.T01:CDS | 45.0% |
| ! | CTTGGGCTAAGGTTTTGCAT+GGG | + | Chr3:98285485-98285504 | MsG0380017595.01.T01:CDS | 45.0% |
| ! | GCATTCTCAGCAAGGGTATA+TGG | - | Chr3:98285559-98285578 | None:intergenic | 45.0% |
| ! | GCATTTTCGTGCTGAGAAGT+TGG | + | Chr3:98285222-98285241 | MsG0380017595.01.T01:CDS | 45.0% |
| ! | TAAGGTTTTGCATGGGATGG+AGG | + | Chr3:98285492-98285511 | MsG0380017595.01.T01:CDS | 45.0% |
| !! | ACATTTCTCGAGAAGTGCTC+CGG | - | Chr3:98284510-98284529 | None:intergenic | 45.0% |
| !! | AGGTTTTTGATTGCAGGTGG+TGG | + | Chr3:98285427-98285446 | MsG0380017595.01.T01:CDS | 45.0% |
| !! | ATCGGTGTAGGATTCGGTTT+TGG | - | Chr3:98284228-98284247 | None:intergenic | 45.0% |
| !! | GCCAAGAGGTTTTTGATTGC+AGG | + | Chr3:98285421-98285440 | MsG0380017595.01.T01:CDS | 45.0% |
| !! | TTCAACGAGCATTTTAGCGG+CGG | - | Chr3:98284429-98284448 | None:intergenic | 45.0% |
| !!! | AGGATTCGGTTTTGGAGGAT+CGG | - | Chr3:98284220-98284239 | None:intergenic | 45.0% |
| AAATCTCAAGACTCCGCTGC+TGG | + | Chr3:98284455-98284474 | MsG0380017595.01.T01:CDS | 50.0% | |
| ACACTCTGTTGCCAAGGTGA+TGG | - | Chr3:98285728-98285747 | None:intergenic | 50.0% | |
| ACCACAACTGTGCTTGTTCG+TGG | + | Chr3:98285325-98285344 | MsG0380017595.01.T01:CDS | 50.0% | |
| AGCAGCGGAGTCTTGAGATT+TGG | - | Chr3:98284456-98284475 | None:intergenic | 50.0% | |
| CGGCGATGATGTTGGATTGA+CGG | - | Chr3:98284271-98284290 | None:intergenic | 50.0% | |
| GAAGAGCTTTCTCTTGGGGA+TGG | + | Chr3:98285262-98285281 | MsG0380017595.01.T01:CDS | 50.0% | |
| GCACTTGTGCTAACCAGCAA+TGG | - | Chr3:98285706-98285725 | None:intergenic | 50.0% | |
| GTCAAGGCAATTGGGTGCTT+GGG | + | Chr3:98285468-98285487 | MsG0380017595.01.T01:CDS | 50.0% | |
| TACTGAGCTTGTGAAGGGCT+TGG | + | Chr3:98284829-98284848 | MsG0380017595.01.T01:CDS | 50.0% | |
| TAGCACAAGTGCCATCACCT+TGG | + | Chr3:98285714-98285733 | MsG0380017595.01.T01:CDS | 50.0% | |
| TCACGGAGATCCACCATTTC+CGG | - | Chr3:98284770-98284789 | None:intergenic | 50.0% | |
| TCCACGAACAAGCACAGTTG+TGG | - | Chr3:98285329-98285348 | None:intergenic | 50.0% | |
| TGCCTTGACAGCTCTATCTC+CGG | - | Chr3:98285457-98285476 | None:intergenic | 50.0% | |
| TGTCAAGGCAATTGGGTGCT+TGG | + | Chr3:98285467-98285486 | MsG0380017595.01.T01:CDS | 50.0% | |
| TGTCTCCTCCTTCTCTCTCA+TGG | + | Chr3:98284527-98284546 | MsG0380017595.01.T01:CDS | 50.0% | |
| TGTTGATGTTCTCACCGCCA+TGG | + | Chr3:98284601-98284620 | MsG0380017595.01.T01:CDS | 50.0% | |
| ! | AAGGTTAGTCATGCTGCTGG+TGG | + | Chr3:98284863-98284882 | MsG0380017595.01.T01:CDS | 50.0% |
| ! | GCTTGGGCTAAGGTTTTGCA+TGG | + | Chr3:98285484-98285503 | MsG0380017595.01.T01:CDS | 50.0% |
| ! | GGCTAAGGTTTTGCATGGGA+TGG | + | Chr3:98285489-98285508 | MsG0380017595.01.T01:CDS | 50.0% |
| !! | GGTGTAGGATTCGGTTTTGG+AGG | - | Chr3:98284225-98284244 | None:intergenic | 50.0% |
| !! | TCAACGAGCATTTTAGCGGC+GGG | - | Chr3:98284428-98284447 | None:intergenic | 50.0% |
| ACCACCGTTGTTGTCATCGC+CGG | + | Chr3:98284488-98284507 | MsG0380017595.01.T01:CDS | 55.0% | |
| ATCCACCATTTCCGGCCTAG+CGG | - | Chr3:98284762-98284781 | None:intergenic | 55.0% | |
| CCTCACACACTCTGTTGCCA+AGG | - | Chr3:98285734-98285753 | None:intergenic | 55.0% | |
| CCTTGGCAACAGAGTGTGTG+AGG | + | Chr3:98285731-98285750 | MsG0380017595.01.T01:CDS | 55.0% | |
| CTCCGGAGATAGAGCTGTCA+AGG | + | Chr3:98285452-98285471 | MsG0380017595.01.T01:CDS | 55.0% | |
| GAATGTGGTGCAGCCATTGC+TGG | + | Chr3:98285690-98285709 | MsG0380017595.01.T01:CDS | 55.0% | |
| GAGTTCAACCGGAACAGCCA+TGG | - | Chr3:98284621-98284640 | None:intergenic | 55.0% | |
| GCAATTGGGTGCTTGGGCTA+AGG | + | Chr3:98285474-98285493 | MsG0380017595.01.T01:CDS | 55.0% | |
| GCTGCACCACATTCTCCTCA+AGG | - | Chr3:98285684-98285703 | None:intergenic | 55.0% | |
| TCTCTGTCATCGATCCCGCT+AGG | + | Chr3:98284744-98284763 | MsG0380017595.01.T01:CDS | 55.0% | |
| TGCTCCGGCGATGACAACAA+CGG | - | Chr3:98284495-98284514 | None:intergenic | 55.0% | |
| TTCAACCGGAACAGCCATGG+CGG | - | Chr3:98284618-98284637 | None:intergenic | 55.0% | |
| ! | TGCTGGTGGACCTACCAGAA+TGG | + | Chr3:98284877-98284896 | MsG0380017595.01.T01:CDS | 55.0% |
| !!! | CGGTTTTGGAGGATCGGTGA+GGG | - | Chr3:98284214-98284233 | None:intergenic | 55.0% |
| !!! | GGTTTTGGAGGATCGGTGAG+GGG | - | Chr3:98284213-98284232 | None:intergenic | 55.0% |
| !!! | TCGGTTTTGGAGGATCGGTG+AGG | - | Chr3:98284215-98284234 | None:intergenic | 55.0% |
| AACGCCGTTCGCACCAGTCT+CGG | + | Chr3:98284305-98284324 | MsG0380017595.01.T01:CDS | 60.0% | |
| AACGGCGTTAGCGACGGAAC+GGG | - | Chr3:98284294-98284313 | None:intergenic | 60.0% | |
| CAAGACTCCGCTGCTGGTGA+TGG | + | Chr3:98284461-98284480 | MsG0380017595.01.T01:CDS | 60.0% | |
| CAGTCTCGGCCCCAAAGGTA+TGG | + | Chr3:98284319-98284338 | MsG0380017595.01.T01:CDS | 60.0% | |
| GAACGGCGTTAGCGACGGAA+CGG | - | Chr3:98284295-98284314 | None:intergenic | 60.0% | |
| GGCGATGACAACAACGGTGG+TGG | - | Chr3:98284489-98284508 | None:intergenic | 60.0% | |
| GGTGGTTCCATCACCAGCAG+CGG | - | Chr3:98284471-98284490 | None:intergenic | 60.0% | |
| TCCACCATTTCCGGCCTAGC+GGG | - | Chr3:98284761-98284780 | None:intergenic | 60.0% | |
| TCCGGCGATGACAACAACGG+TGG | - | Chr3:98284492-98284511 | None:intergenic | 60.0% | |
| TCTCACCGCCATGGCTGTTC+CGG | + | Chr3:98284610-98284629 | MsG0380017595.01.T01:CDS | 60.0% | |
| TGTCATCGATCCCGCTAGGC+CGG | + | Chr3:98284748-98284767 | MsG0380017595.01.T01:CDS | 60.0% | |
| ! | GATTGCAGGTGGTGGTGCTC+CGG | + | Chr3:98285435-98285454 | MsG0380017595.01.T01:CDS | 60.0% |
| !! | CATACCTTTGGGGCCGAGAC+TGG | - | Chr3:98284321-98284340 | None:intergenic | 60.0% |
| CGATCCCGCTAGGCCGGAAA+TGG | + | Chr3:98284754-98284773 | MsG0380017595.01.T01:CDS | 65.0% | |
| GGAACGGGCGGCGATGATGT+TGG | - | Chr3:98284279-98284298 | None:intergenic | 65.0% | |
| GGTGCGAACGGCGTTAGCGA+CGG | - | Chr3:98284300-98284319 | None:intergenic | 65.0% | |
| TCCCGCTAGGCCGGAAATGG+TGG | + | Chr3:98284757-98284776 | MsG0380017595.01.T01:CDS | 65.0% | |
| ! | GAGGATGGTAGCGCCGTCGT+TGG | - | Chr3:98284384-98284403 | None:intergenic | 65.0% |
| CGCACCAGTCTCGGCCCCAA+AGG | + | Chr3:98284314-98284333 | MsG0380017595.01.T01:CDS | 70.0% | |
| GGAGGATCGGTGAGGGGCTG+CGG | - | Chr3:98284207-98284226 | None:intergenic | 70.0% | |
| GGCGTTAGCGACGGAACGGG+CGG | - | Chr3:98284291-98284310 | None:intergenic | 70.0% | |
| GGGGCCGAGACTGGTGCGAA+CGG | - | Chr3:98284312-98284331 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 98284194 | 98285792 | 98284194 | ID=MsG0380017595.01;Name=MsG0380017595.01 |
| Chr3 | mRNA | 98284194 | 98285792 | 98284194 | ID=MsG0380017595.01.T01;Parent=MsG0380017595.01;Name=MsG0380017595.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|532 |
| Chr3 | exon | 98284194 | 98285792 | 98284194 | ID=MsG0380017595.01.T01:exon:4161;Parent=MsG0380017595.01.T01 |
| Chr3 | CDS | 98284194 | 98285792 | 98284194 | ID=MsG0380017595.01.T01:cds;Parent=MsG0380017595.01.T01 |
| Chr3 | mRNA | 98284338 | 98285792 | 98284338 | ID=MsG0380017595.01.T02;Parent=MsG0380017595.01;Name=MsG0380017595.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|484 |
| Chr3 | exon | 98284338 | 98285792 | 98284338 | ID=MsG0380017595.01.T02:exon:4162;Parent=MsG0380017595.01.T02 |
| Chr3 | CDS | 98284338 | 98285792 | 98284338 | ID=MsG0380017595.01.T02:cds;Parent=MsG0380017595.01.T02 |
| Chr3 | mRNA | 98285031 | 98285792 | 98285031 | ID=MsG0380017595.01.T03;Parent=MsG0380017595.01;Name=MsG0380017595.01.T03;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|253 |
| Chr3 | exon | 98285031 | 98285792 | 98285031 | ID=MsG0380017595.01.T03:exon:4163;Parent=MsG0380017595.01.T03 |
| Chr3 | CDS | 98285031 | 98285792 | 98285031 | ID=MsG0380017595.01.T03:cds;Parent=MsG0380017595.01.T03 |
| Chr3 | mRNA | 98285316 | 98285792 | 98285316 | ID=MsG0380017595.01.T04;Parent=MsG0380017595.01;Name=MsG0380017595.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|158 |
| Chr3 | exon | 98285316 | 98285792 | 98285316 | ID=MsG0380017595.01.T04:exon:4164;Parent=MsG0380017595.01.T04 |
| Chr3 | CDS | 98285316 | 98285792 | 98285316 | ID=MsG0380017595.01.T04:cds;Parent=MsG0380017595.01.T04 |
| Chr3 | mRNA | 98285508 | 98285792 | 98285508 | ID=MsG0380017595.01.T05;Parent=MsG0380017595.01;Name=MsG0380017595.01.T05;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|94 |
| Chr3 | exon | 98285508 | 98285792 | 98285508 | ID=MsG0380017595.01.T05:exon:4165;Parent=MsG0380017595.01.T05 |
| Chr3 | CDS | 98285508 | 98285792 | 98285508 | ID=MsG0380017595.01.T05:cds;Parent=MsG0380017595.01.T05 |
| Chr3 | mRNA | 98285623 | 98285751 | 98285623 | ID=MsG0380017595.01.T06;Parent=MsG0380017595.01;Name=MsG0380017595.01.T06;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|42 |
| Chr3 | exon | 98285623 | 98285751 | 98285623 | ID=MsG0380017595.01.T06:exon:4166;Parent=MsG0380017595.01.T06 |
| Chr3 | CDS | 98285623 | 98285751 | 98285623 | ID=MsG0380017595.01.T06:cds;Parent=MsG0380017595.01.T06 |
| Chr3 | mRNA | 98285653 | 98285751 | 98285653 | ID=MsG0380017595.01.T07;Parent=MsG0380017595.01;Name=MsG0380017595.01.T07;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|32 |
| Chr3 | exon | 98285653 | 98285751 | 98285653 | ID=MsG0380017595.01.T07:exon:4167;Parent=MsG0380017595.01.T07 |
| Chr3 | CDS | 98285653 | 98285751 | 98285653 | ID=MsG0380017595.01.T07:cds;Parent=MsG0380017595.01.T07 |
| Gene Sequence |
| Protein sequence |
