Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017658.01.T01 | XP_003603610.1 | 97.768 | 448 | 10 | 0 | 1 | 448 | 118 | 565 | 0 | 919 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017658.01.T01 | Q8LIY8 | 79.018 | 448 | 94 | 0 | 1 | 448 | 118 | 565 | 0 | 776 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017658.01.T01 | G7J3F4 | 97.768 | 448 | 10 | 0 | 1 | 448 | 118 | 565 | 0.0 | 919 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180001614.01 | MsG0380017658.01 | -0.801996 | 6.915992e-49 | 3.349840e-46 |
MsG0280011016.01 | MsG0380017658.01 | 0.811356 | 7.295176e-51 | 4.505672e-48 |
MsG0380011756.01 | MsG0380017658.01 | 0.800764 | 1.236754e-48 | 5.806320e-46 |
MsG0380016845.01 | MsG0380017658.01 | 0.808902 | 2.464874e-50 | 1.426544e-47 |
MsG0380017658.01 | MsG0880045804.01 | 0.801771 | 7.693019e-49 | 3.704874e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017658.01.T01 | MTR_3g109610 | 97.768 | 448 | 10 | 0 | 1 | 448 | 118 | 565 | 0.0 | 919 |
MsG0380017658.01.T01 | MTR_7g063800 | 97.098 | 448 | 13 | 0 | 1 | 448 | 118 | 565 | 0.0 | 913 |
MsG0380017658.01.T01 | MTR_3g109610 | 97.548 | 367 | 9 | 0 | 1 | 367 | 118 | 484 | 0.0 | 754 |
MsG0380017658.01.T01 | MTR_5g025230 | 24.893 | 466 | 273 | 20 | 11 | 445 | 148 | 567 | 7.64e-22 | 98.6 |
MsG0380017658.01.T01 | MTR_5g025250 | 24.947 | 469 | 269 | 22 | 11 | 445 | 149 | 568 | 2.35e-21 | 97.1 |
MsG0380017658.01.T01 | MTR_5g025270 | 25.163 | 461 | 279 | 20 | 11 | 445 | 150 | 570 | 4.96e-19 | 90.1 |
MsG0380017658.01.T01 | MTR_2g070460 | 24.236 | 458 | 287 | 20 | 11 | 445 | 181 | 601 | 3.81e-18 | 87.4 |
MsG0380017658.01.T01 | MTR_8g037275 | 23.605 | 466 | 293 | 20 | 11 | 445 | 131 | 564 | 2.42e-17 | 84.7 |
MsG0380017658.01.T01 | MTR_8g037315 | 24.043 | 470 | 294 | 21 | 11 | 448 | 94 | 532 | 1.48e-16 | 82.4 |
MsG0380017658.01.T01 | MTR_8g037290 | 22.996 | 474 | 286 | 20 | 11 | 445 | 131 | 564 | 8.66e-16 | 80.1 |
MsG0380017658.01.T01 | MTR_8g037310 | 23.579 | 475 | 282 | 21 | 11 | 445 | 131 | 564 | 1.54e-14 | 76.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380017658.01.T01 | AT4G32810 | 69.604 | 454 | 131 | 4 | 1 | 447 | 116 | 569 | 0.0 | 685 |
MsG0380017658.01.T01 | AT4G32810 | 65.833 | 480 | 131 | 5 | 1 | 447 | 116 | 595 | 0.0 | 670 |
MsG0380017658.01.T01 | AT1G30100 | 26.915 | 457 | 277 | 20 | 11 | 445 | 159 | 580 | 1.23e-22 | 101 |
MsG0380017658.01.T01 | AT3G63520 | 25.636 | 472 | 281 | 23 | 11 | 448 | 95 | 530 | 1.13e-20 | 95.1 |
MsG0380017658.01.T01 | AT4G19170 | 25.373 | 469 | 277 | 20 | 11 | 445 | 158 | 587 | 1.28e-16 | 82.8 |
MsG0380017658.01.T01 | AT3G14440 | 23.490 | 447 | 304 | 17 | 11 | 445 | 169 | 589 | 1.30e-15 | 79.7 |
MsG0380017658.01.T01 | AT4G18350 | 23.747 | 459 | 290 | 21 | 11 | 445 | 152 | 574 | 1.45e-12 | 70.1 |
Find 152 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGAACCTTCGCTCATTTAA+TGG | 0.163091 | 3:+99223067 | MsG0380017658.01.T01:CDS |
TACTTCAACCCTAGATAATT+AGG | 0.195998 | 3:-99223331 | None:intergenic |
CAATACCTCAATGGCATTTC+AGG | 0.243692 | 3:-99222694 | None:intergenic |
ATTTGAGTATAGTGATTCTT+TGG | 0.245117 | 3:+99222465 | MsG0380017658.01.T01:CDS |
ATGTAAAATTAGCGATTATA+TGG | 0.248887 | 3:+99224072 | MsG0380017658.01.T01:three_prime_UTR |
ATGCCTTTCCCATGTTCATT+TGG | 0.256695 | 3:-99223289 | None:intergenic |
TGCCTTTCCCATGTTCATTT+GGG | 0.293559 | 3:-99223288 | None:intergenic |
GCCAGAGCTAAGTTCCCTTA+TGG | 0.303157 | 3:+99223775 | MsG0380017658.01.T01:CDS |
CTTCATATGCATTTATGAAA+TGG | 0.332304 | 3:-99222955 | None:intergenic |
CCAATTGTCTCCAATGTGTC+GGG | 0.341840 | 3:-99222439 | None:intergenic |
TCATACATGTACTTCCGTTA+TGG | 0.342945 | 3:-99223993 | None:intergenic |
ACTTCAACCCTAGATAATTA+GGG | 0.351152 | 3:-99223330 | None:intergenic |
TCTAATGAGAGGAAGGTTAT+TGG | 0.352894 | 3:+99222595 | MsG0380017658.01.T01:CDS |
GACTGTTGTCATTATCGTAT+TGG | 0.353383 | 3:+99223854 | MsG0380017658.01.T01:three_prime_UTR |
CATATGGATTGCATGGATGC+TGG | 0.364734 | 3:+99223803 | MsG0380017658.01.T01:CDS |
TGTCTGACGGAGACACAAAA+AGG | 0.364914 | 3:+99222400 | MsG0380017658.01.T01:CDS |
TTCCCTTATGGACTTCCATA+TGG | 0.378303 | 3:+99223787 | MsG0380017658.01.T01:CDS |
GTAACCTTGGTGAGGGTGTT+GGG | 0.379272 | 3:-99223397 | None:intergenic |
TTATTGGACGGGTCGATTGT+AGG | 0.384903 | 3:+99222611 | MsG0380017658.01.T01:CDS |
TATTGGACGGGTCGATTGTA+GGG | 0.385865 | 3:+99222612 | MsG0380017658.01.T01:CDS |
AGCATAAACCCTAATTATCT+AGG | 0.402596 | 3:+99223322 | MsG0380017658.01.T01:CDS |
TTTGAGTATAGTGATTCTTT+GGG | 0.403929 | 3:+99222466 | MsG0380017658.01.T01:CDS |
CACGCCTGTGTTGGCATTGT+CGG | 0.410914 | 3:-99222350 | None:intergenic |
CATAACATGCATAAAAGCTT+TGG | 0.420483 | 3:-99222779 | None:intergenic |
AAATGGAGAAGGATATGCTT+TGG | 0.421784 | 3:+99223723 | MsG0380017658.01.T01:CDS |
CCCGACACATTGGAGACAAT+TGG | 0.425582 | 3:+99222439 | MsG0380017658.01.T01:CDS |
CCTTATAAAACCAGGGTACT+TGG | 0.426403 | 3:+99222552 | MsG0380017658.01.T01:CDS |
GCTGCTTCTAATGTTCCATA+TGG | 0.430345 | 3:-99223259 | None:intergenic |
GGGCGGTACATCACCCGGTT+GGG | 0.432763 | 3:+99222633 | MsG0380017658.01.T01:CDS |
GTCGGCCTTCACTTCGAGGA+CGG | 0.433069 | 3:+99222166 | MsG0380017658.01.T01:CDS |
AACTTCAGGCATCTCTTTGA+CGG | 0.439182 | 3:+99222130 | MsG0380017658.01.T01:CDS |
TCCTCTGTTGCTCCTGGTCG+AGG | 0.440338 | 3:-99223581 | None:intergenic |
ATAACATAGTGTTCAGTAAC+GGG | 0.440855 | 3:-99222667 | None:intergenic |
TATGAAGAGGAAGATGAAGA+TGG | 0.442587 | 3:+99222971 | MsG0380017658.01.T01:CDS |
CCACTGGATGGAAGTCCATA+TGG | 0.442857 | 3:+99223244 | MsG0380017658.01.T01:CDS |
ATTGTGCTCGGAATTTGCTC+AGG | 0.443327 | 3:+99222713 | MsG0380017658.01.T01:CDS |
TCGGCCTTCACTTCGAGGAC+GGG | 0.453191 | 3:+99222167 | MsG0380017658.01.T01:CDS |
TGTGTCGGGGTCTATCACTA+TGG | 0.455071 | 3:-99222425 | None:intergenic |
TCCAATTGTCTCCAATGTGT+CGG | 0.457857 | 3:-99222440 | None:intergenic |
CTTGGTCGGCCTTCACTTCG+AGG | 0.458257 | 3:+99222162 | MsG0380017658.01.T01:CDS |
AATCCATATGGAAGTCCATA+AGG | 0.458996 | 3:-99223790 | None:intergenic |
ACATAGGGGACTACAACTTC+AGG | 0.459853 | 3:+99222116 | MsG0380017658.01.T01:CDS |
TCATCTTCCTCTGTTGCTCC+TGG | 0.464373 | 3:-99223587 | None:intergenic |
TGGTGAAGCTCGGCGATGGG+AGG | 0.464890 | 3:+99222371 | MsG0380017658.01.T01:CDS |
GCCCAGGTATGTGGAACATA+GGG | 0.467857 | 3:+99222101 | None:intergenic |
AATCAGAAAGGGCTAAGAAC+TGG | 0.469124 | 3:+99223519 | MsG0380017658.01.T01:CDS |
TGAAATTTGTACAATGGAGT+TGG | 0.476527 | 3:-99222742 | None:intergenic |
CAGCATCCATGCAATCCATA+TGG | 0.477535 | 3:-99223802 | None:intergenic |
ATGAAGAGGAAGATGAAGAT+GGG | 0.478254 | 3:+99222972 | MsG0380017658.01.T01:CDS |
GACGGGTACGCCACCTTGGT+CGG | 0.481643 | 3:+99222148 | MsG0380017658.01.T01:CDS |
TTGGTGGCGAGGATGGAAAC+TGG | 0.483277 | 3:+99222571 | MsG0380017658.01.T01:CDS |
AACTCGCTATCCGTGACAAT+GGG | 0.483621 | 3:-99222511 | None:intergenic |
GGGGCGGTACATCACCCGGT+TGG | 0.485866 | 3:+99222632 | MsG0380017658.01.T01:CDS |
CCATCGGCAAGTTGAATCTC+AGG | 0.486110 | 3:+99222204 | MsG0380017658.01.T01:CDS |
CAAAATACCTACCTAGCATC+TGG | 0.489402 | 3:-99223103 | None:intergenic |
TGCATAAAAGCTTTGGACTC+AGG | 0.491550 | 3:-99222772 | None:intergenic |
GGGAAAGGAATGGACCCAAC+CGG | 0.491902 | 3:-99222647 | None:intergenic |
AGTAACCTTGGTGAGGGTGT+TGG | 0.493425 | 3:-99223398 | None:intergenic |
AACACAGGCGTGGTGAAGCT+CGG | 0.493828 | 3:+99222361 | MsG0380017658.01.T01:CDS |
TCCATAAGGGAACTTAGCTC+TGG | 0.495616 | 3:-99223776 | None:intergenic |
GGCGTGGTGAAGCTCGGCGA+TGG | 0.496361 | 3:+99222367 | MsG0380017658.01.T01:CDS |
ATATGGATTGCATGGATGCT+GGG | 0.496428 | 3:+99223804 | MsG0380017658.01.T01:CDS |
GGTGAAGCTCGGCGATGGGA+GGG | 0.506441 | 3:+99222372 | MsG0380017658.01.T01:CDS |
GGACTTCCATATGGATTGCA+TGG | 0.509757 | 3:+99223796 | MsG0380017658.01.T01:CDS |
GGCGGTTAGTAGCCGGCCAT+CGG | 0.511442 | 3:+99222188 | MsG0380017658.01.T01:CDS |
AGGGTACTTGGTGGCGAGGA+TGG | 0.513266 | 3:+99222564 | MsG0380017658.01.T01:CDS |
ATCCATATGGAAGTCCATAA+GGG | 0.514145 | 3:-99223789 | None:intergenic |
TGGTCGGTTTAGAATACCAC+TGG | 0.515307 | 3:+99223228 | MsG0380017658.01.T01:CDS |
GCGCTGTGCTCCACAAGCAT+AGG | 0.517620 | 3:-99223362 | None:intergenic |
ACTTCAGGCATCTCTTTGAC+GGG | 0.518526 | 3:+99222131 | MsG0380017658.01.T01:CDS |
AAAATTTCTTAGCCTACGTA+GGG | 0.521712 | 3:+99222293 | MsG0380017658.01.T01:CDS |
AGATTCAACTTGCCGATGGC+CGG | 0.528502 | 3:-99222200 | None:intergenic |
TACAGATATGCCTATGCTTG+TGG | 0.531718 | 3:+99223352 | MsG0380017658.01.T01:CDS |
GAGCTTCACCACGCCTGTGT+TGG | 0.535944 | 3:-99222359 | None:intergenic |
AGGGTGTTGGGGAAGTTACA+AGG | 0.536224 | 3:-99223385 | None:intergenic |
AAACTCGCTATCCGTGACAA+TGG | 0.539476 | 3:-99222512 | None:intergenic |
TAAGTGAGGAACCAGAGAAA+AGG | 0.541857 | 3:-99222327 | None:intergenic |
GAAGCTCGGCGATGGGAGGG+TGG | 0.544082 | 3:+99222375 | MsG0380017658.01.T01:CDS |
CTTTGACGGGTACGCCACCT+TGG | 0.546670 | 3:+99222144 | MsG0380017658.01.T01:CDS |
TGCCATTGAGGTATTGTGCT+CGG | 0.551269 | 3:+99222701 | MsG0380017658.01.T01:CDS |
AGAGGAAGATGAAGATGGGA+GGG | 0.552579 | 3:+99222976 | MsG0380017658.01.T01:CDS |
GAGTATAGTGATTCTTTGGG+AGG | 0.552797 | 3:+99222469 | MsG0380017658.01.T01:CDS |
AGATCGATCTACAATCAGAA+AGG | 0.553319 | 3:+99223507 | MsG0380017658.01.T01:intron |
GCGTGGTGAAGCTCGGCGAT+GGG | 0.553336 | 3:+99222368 | MsG0380017658.01.T01:CDS |
ATCCCCGACCTTATAAAACC+AGG | 0.554782 | 3:+99222544 | MsG0380017658.01.T01:CDS |
TGAGAGGAAGGTTATTGGAC+GGG | 0.555588 | 3:+99222600 | MsG0380017658.01.T01:CDS |
GGCCCAGGTATGTGGAACAT+AGG | 0.555855 | 3:+99222100 | None:intergenic |
TGGGAGGGTGGTTTGTCTGA+CGG | 0.556766 | 3:+99222387 | MsG0380017658.01.T01:CDS |
GAGGACGGGCGGTTAGTAGC+CGG | 0.562327 | 3:+99222181 | MsG0380017658.01.T01:CDS |
GATCGATCTACAATCAGAAA+GGG | 0.563093 | 3:+99223508 | MsG0380017658.01.T01:intron |
GCATTAGACCCAAATGAACA+TGG | 0.563212 | 3:+99223280 | MsG0380017658.01.T01:CDS |
TTCCGAGCACAATACCTCAA+TGG | 0.568781 | 3:-99222703 | None:intergenic |
TTTCATAAATGCATATGAAG+AGG | 0.569019 | 3:+99222958 | MsG0380017658.01.T01:CDS |
GTTCAGTAACGGGAAAGGAA+TGG | 0.569137 | 3:-99222657 | None:intergenic |
AACTGGCTCTAATGAGAGGA+AGG | 0.569553 | 3:+99222588 | MsG0380017658.01.T01:CDS |
ACCGCCCGTCCTCGAAGTGA+AGG | 0.571723 | 3:-99222171 | None:intergenic |
ATTGAAATAATAGGGTTGGT+CGG | 0.571946 | 3:+99223212 | MsG0380017658.01.T01:intron |
TCTGGCAATCTCTTCAAAAG+TGG | 0.572064 | 3:-99223758 | None:intergenic |
ATCCTCGCCACCAAGTACCC+TGG | 0.572517 | 3:-99222562 | None:intergenic |
ATTGGACGGGTCGATTGTAG+GGG | 0.575382 | 3:+99222613 | MsG0380017658.01.T01:CDS |
TAACCTTGGTGAGGGTGTTG+GGG | 0.575449 | 3:-99223396 | None:intergenic |
AAGAGGAAGATGAAGATGGG+AGG | 0.578297 | 3:+99222975 | MsG0380017658.01.T01:CDS |
GCATAAACCCTAATTATCTA+GGG | 0.582367 | 3:+99223323 | MsG0380017658.01.T01:CDS |
AGTATATGCGAACAACCACT+AGG | 0.584432 | 3:-99224099 | None:intergenic |
AAGATGTTCTACCAGATGCT+AGG | 0.584562 | 3:+99223092 | MsG0380017658.01.T01:CDS |
AAGAAAAGTAACCTTGGTGA+GGG | 0.584819 | 3:-99223404 | None:intergenic |
GCTAAGAACTGGTATGAAGA+AGG | 0.585069 | 3:+99223530 | MsG0380017658.01.T01:CDS |
CGATTATATGGATTCCCTAG+TGG | 0.585472 | 3:+99224084 | MsG0380017658.01.T01:three_prime_UTR |
GAAAATTTCTTAGCCTACGT+AGG | 0.586815 | 3:+99222292 | MsG0380017658.01.T01:CDS |
TTGTGCTCGGAATTTGCTCA+GGG | 0.588634 | 3:+99222714 | MsG0380017658.01.T01:CDS |
CTCCATTGTACAAATTTCAG+TGG | 0.589016 | 3:+99222746 | MsG0380017658.01.T01:CDS |
AGTGATAGACCCCGACACAT+TGG | 0.593877 | 3:+99222429 | MsG0380017658.01.T01:CDS |
TATAAAACCAGGGTACTTGG+TGG | 0.596183 | 3:+99222555 | MsG0380017658.01.T01:CDS |
CTCGAAGTGAAGGCCGACCA+AGG | 0.599301 | 3:-99222161 | None:intergenic |
CTCTGCACATCCCATTGTCA+CGG | 0.602091 | 3:+99222501 | MsG0380017658.01.T01:CDS |
GGAAAGGAATGGACCCAACC+GGG | 0.602396 | 3:-99222646 | None:intergenic |
AACCAGGGTACTTGGTGGCG+AGG | 0.602728 | 3:+99222560 | MsG0380017658.01.T01:CDS |
ATAGTGTTCAGTAACGGGAA+AGG | 0.603605 | 3:-99222662 | None:intergenic |
GCCTTCACTTCGAGGACGGG+CGG | 0.605814 | 3:+99222170 | MsG0380017658.01.T01:CDS |
TGTAGGGGCGGTACATCACC+CGG | 0.606513 | 3:+99222628 | MsG0380017658.01.T01:CDS |
CGGTTTAGAATACCACTGGA+TGG | 0.607749 | 3:+99223232 | MsG0380017658.01.T01:CDS |
CTTTGCCATTAAATGAGCGA+AGG | 0.609125 | 3:-99223072 | None:intergenic |
AATAACATAGTGTTCAGTAA+CGG | 0.609373 | 3:-99222668 | None:intergenic |
CATGTTATGTGCAAGACTAG+TGG | 0.609567 | 3:+99222793 | MsG0380017658.01.T01:CDS |
AAAGAAAAGTAACCTTGGTG+AGG | 0.610236 | 3:-99223405 | None:intergenic |
GACCCAAATGAACATGGGAA+AGG | 0.610952 | 3:+99223286 | MsG0380017658.01.T01:CDS |
TTGTGCCTGAAATGCCATTG+AGG | 0.611330 | 3:+99222689 | MsG0380017658.01.T01:CDS |
AAATGAACATGGGAAAGGCA+TGG | 0.612023 | 3:+99223291 | MsG0380017658.01.T01:CDS |
GGAGCAACAGAGGAAGATGA+TGG | 0.616543 | 3:+99223590 | MsG0380017658.01.T01:CDS |
ATGAGAGGAAGGTTATTGGA+CGG | 0.618133 | 3:+99222599 | MsG0380017658.01.T01:CDS |
TGCCACTGAAATTTGTACAA+TGG | 0.622547 | 3:-99222748 | None:intergenic |
GAGGGTGACTGCTGTTATTG+CGG | 0.628329 | 3:+99222994 | MsG0380017658.01.T01:CDS |
GCCTCGACCAGGAGCAACAG+AGG | 0.630798 | 3:+99223580 | MsG0380017658.01.T01:CDS |
TGGAAACTGGCTCTAATGAG+AGG | 0.631356 | 3:+99222584 | MsG0380017658.01.T01:CDS |
CAATTGTCTCCAATGTGTCG+GGG | 0.633425 | 3:-99222438 | None:intergenic |
TCCCCGACCTTATAAAACCA+GGG | 0.638042 | 3:+99222545 | MsG0380017658.01.T01:CDS |
CCATATGGACTTCCATCCAG+TGG | 0.639234 | 3:-99223244 | None:intergenic |
AAATGGAAAGTAACGAACAA+AGG | 0.641051 | 3:-99222938 | None:intergenic |
AAGCTGATAGCAATCCATAA+CGG | 0.641754 | 3:+99223979 | MsG0380017658.01.T01:three_prime_UTR |
CCTGAGATTCAACTTGCCGA+TGG | 0.643276 | 3:-99222204 | None:intergenic |
CGACAATGCCAACACAGGCG+TGG | 0.649077 | 3:+99222351 | MsG0380017658.01.T01:CDS |
CATTAGACCCAAATGAACAT+GGG | 0.657991 | 3:+99223281 | MsG0380017658.01.T01:CDS |
GTTGGCATTGTCGGTAAGTG+AGG | 0.658851 | 3:-99222341 | None:intergenic |
GGGTGTTGGGGAAGTTACAA+GGG | 0.668827 | 3:-99223384 | None:intergenic |
GTATATGCGAACAACCACTA+GGG | 0.671011 | 3:-99224098 | None:intergenic |
GCTTGCTAGCTCCCCTACGT+AGG | 0.674811 | 3:-99222305 | None:intergenic |
CTTACCGACAATGCCAACAC+AGG | 0.676631 | 3:+99222346 | MsG0380017658.01.T01:CDS |
CCCAGGTATGTGGAACATAG+GGG | 0.677812 | 3:+99222102 | None:intergenic |
CTTCCCCAACACCCTCACCA+AGG | 0.691072 | 3:+99223393 | MsG0380017658.01.T01:CDS |
GGACGGGTCGATTGTAGGGG+CGG | 0.705064 | 3:+99222616 | MsG0380017658.01.T01:CDS |
GAAGTGAAGGCCGACCAAGG+TGG | 0.710579 | 3:-99222158 | None:intergenic |
AAATTTCTTAGCCTACGTAG+GGG | 0.750129 | 3:+99222294 | MsG0380017658.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTGTTTATTGAAATAATA+GGG | + | Chr3:99223204-99223223 | MsG0380017658.01.T01:intron | 15.0% |
!! | TCATTGTTTATTGAAATAAT+AGG | + | Chr3:99223203-99223222 | MsG0380017658.01.T01:intron | 15.0% |
!!! | ACATCTTAATTATTTTACAT+TGG | + | Chr3:99223126-99223145 | MsG0380017658.01.T01:intron | 15.0% |
!! | ATGTAAAATTAGCGATTATA+TGG | + | Chr3:99224072-99224091 | MsG0380017658.01.T01:three_prime_UTR | 20.0% |
! | AAAAAAAAGTTAGAACAAGG+AGG | - | Chr3:99223660-99223679 | None:intergenic | 25.0% |
! | AAAAAAAGTTAGAACAAGGA+GGG | - | Chr3:99223659-99223678 | None:intergenic | 25.0% |
! | AATAACATAGTGTTCAGTAA+CGG | - | Chr3:99222671-99222690 | None:intergenic | 25.0% |
! | ATTTGAGTATAGTGATTCTT+TGG | + | Chr3:99222465-99222484 | MsG0380017658.01.T01:CDS | 25.0% |
! | CTTCATATGCATTTATGAAA+TGG | - | Chr3:99222958-99222977 | None:intergenic | 25.0% |
! | GGTAAAAAAAAGTTAGAACA+AGG | - | Chr3:99223663-99223682 | None:intergenic | 25.0% |
! | GTTTATTGAAATAATAGGGT+TGG | + | Chr3:99223208-99223227 | MsG0380017658.01.T01:intron | 25.0% |
! | TTTCATAAATGCATATGAAG+AGG | + | Chr3:99222958-99222977 | MsG0380017658.01.T01:CDS | 25.0% |
! | TTTGAGTATAGTGATTCTTT+GGG | + | Chr3:99222466-99222485 | MsG0380017658.01.T01:CDS | 25.0% |
!!! | ATTTTGGTATGTGATTTTGA+AGG | + | Chr3:99222898-99222917 | MsG0380017658.01.T01:intron | 25.0% |
AAAAAAGTTAGAACAAGGAG+GGG | - | Chr3:99223658-99223677 | None:intergenic | 30.0% | |
AAAATTTCTTAGCCTACGTA+GGG | + | Chr3:99222293-99222312 | MsG0380017658.01.T01:CDS | 30.0% | |
AAATGGAAAGTAACGAACAA+AGG | - | Chr3:99222941-99222960 | None:intergenic | 30.0% | |
ACGTTCAACTAAATGTATGT+TGG | - | Chr3:99223469-99223488 | None:intergenic | 30.0% | |
ACTTCAACCCTAGATAATTA+GGG | - | Chr3:99223333-99223352 | None:intergenic | 30.0% | |
AGCATAAACCCTAATTATCT+AGG | + | Chr3:99223322-99223341 | MsG0380017658.01.T01:CDS | 30.0% | |
ATAACATAGTGTTCAGTAAC+GGG | - | Chr3:99222670-99222689 | None:intergenic | 30.0% | |
CATAACATGCATAAAAGCTT+TGG | - | Chr3:99222782-99222801 | None:intergenic | 30.0% | |
CATACAAAGAAAAGTAACCT+TGG | - | Chr3:99223413-99223432 | None:intergenic | 30.0% | |
GCATAAACCCTAATTATCTA+GGG | + | Chr3:99223323-99223342 | MsG0380017658.01.T01:CDS | 30.0% | |
GTATTCAATTATGACCTTAC+AGG | - | Chr3:99223157-99223176 | None:intergenic | 30.0% | |
TACTTCAACCCTAGATAATT+AGG | - | Chr3:99223334-99223353 | None:intergenic | 30.0% | |
TCAACTAAATGTATGTTGGT+GGG | - | Chr3:99223465-99223484 | None:intergenic | 30.0% | |
TGAAATTTGTACAATGGAGT+TGG | - | Chr3:99222745-99222764 | None:intergenic | 30.0% | |
TTCAACTAAATGTATGTTGG+TGG | - | Chr3:99223466-99223485 | None:intergenic | 30.0% | |
! | ATTGAAATAATAGGGTTGGT+CGG | + | Chr3:99223212-99223231 | MsG0380017658.01.T01:intron | 30.0% |
! | CTAAGAAATTTTCAGCCTTA+GGG | - | Chr3:99222285-99222304 | None:intergenic | 30.0% |
! | TAGTCACACTTTTACTGTTT+TGG | - | Chr3:99223832-99223851 | None:intergenic | 30.0% |
!!! | TTTTTTTACCCTCATATGAC+AGG | + | Chr3:99223673-99223692 | MsG0380017658.01.T01:intron | 30.0% |
AAAGAAAAGTAACCTTGGTG+AGG | - | Chr3:99223408-99223427 | None:intergenic | 35.0% | |
AAATGGAGAAGGATATGCTT+TGG | + | Chr3:99223723-99223742 | MsG0380017658.01.T01:CDS | 35.0% | |
AAATTTCTTAGCCTACGTAG+GGG | + | Chr3:99222294-99222313 | MsG0380017658.01.T01:CDS | 35.0% | |
AAGAAAAGTAACCTTGGTGA+GGG | - | Chr3:99223407-99223426 | None:intergenic | 35.0% | |
AAGCTGATAGCAATCCATAA+CGG | + | Chr3:99223979-99223998 | MsG0380017658.01.T01:three_prime_UTR | 35.0% | |
AATCCATATGGAAGTCCATA+AGG | - | Chr3:99223793-99223812 | None:intergenic | 35.0% | |
AGATCGATCTACAATCAGAA+AGG | + | Chr3:99223507-99223526 | MsG0380017658.01.T01:intron | 35.0% | |
ATCAGTGAGAAAAATGGAGA+AGG | + | Chr3:99223712-99223731 | MsG0380017658.01.T01:CDS | 35.0% | |
ATCCATATGGAAGTCCATAA+GGG | - | Chr3:99223792-99223811 | None:intergenic | 35.0% | |
ATGAAGAGGAAGATGAAGAT+GGG | + | Chr3:99222972-99222991 | MsG0380017658.01.T01:CDS | 35.0% | |
CAATTATGACCTTACAGGAA+GGG | - | Chr3:99223152-99223171 | None:intergenic | 35.0% | |
CATTAGACCCAAATGAACAT+GGG | + | Chr3:99223281-99223300 | MsG0380017658.01.T01:CDS | 35.0% | |
CTCCATTGTACAAATTTCAG+TGG | + | Chr3:99222746-99222765 | MsG0380017658.01.T01:CDS | 35.0% | |
GAAAATTTCTTAGCCTACGT+AGG | + | Chr3:99222292-99222311 | MsG0380017658.01.T01:CDS | 35.0% | |
GACTGTTGTCATTATCGTAT+TGG | + | Chr3:99223854-99223873 | MsG0380017658.01.T01:three_prime_UTR | 35.0% | |
GATCGATCTACAATCAGAAA+GGG | + | Chr3:99223508-99223527 | MsG0380017658.01.T01:intron | 35.0% | |
TATGAAGAGGAAGATGAAGA+TGG | + | Chr3:99222971-99222990 | MsG0380017658.01.T01:CDS | 35.0% | |
TCAATTATGACCTTACAGGA+AGG | - | Chr3:99223153-99223172 | None:intergenic | 35.0% | |
TCATACATGTACTTCCGTTA+TGG | - | Chr3:99223996-99224015 | None:intergenic | 35.0% | |
TCCATCATCAGTGAGAAAAA+TGG | + | Chr3:99223706-99223725 | MsG0380017658.01.T01:CDS | 35.0% | |
TCTAATGAGAGGAAGGTTAT+TGG | + | Chr3:99222595-99222614 | MsG0380017658.01.T01:CDS | 35.0% | |
TGCCACTGAAATTTGTACAA+TGG | - | Chr3:99222751-99222770 | None:intergenic | 35.0% | |
! | GCTAAGAAATTTTCAGCCTT+AGG | - | Chr3:99222286-99222305 | None:intergenic | 35.0% |
!! | TCCATTTTTCTCACTGATGA+TGG | - | Chr3:99223710-99223729 | None:intergenic | 35.0% |
!! | TTGGTATGTGATTTTGAAGG+TGG | + | Chr3:99222901-99222920 | MsG0380017658.01.T01:intron | 35.0% |
!!! | GGATATGCTTTGGTTTTAGA+TGG | + | Chr3:99223733-99223752 | MsG0380017658.01.T01:CDS | 35.0% |
AAATGAACATGGGAAAGGCA+TGG | + | Chr3:99223291-99223310 | MsG0380017658.01.T01:CDS | 40.0% | |
AACTTCAGGCATCTCTTTGA+CGG | + | Chr3:99222130-99222149 | MsG0380017658.01.T01:CDS | 40.0% | |
AAGATGTTCTACCAGATGCT+AGG | + | Chr3:99223092-99223111 | MsG0380017658.01.T01:CDS | 40.0% | |
AATCAGAAAGGGCTAAGAAC+TGG | + | Chr3:99223519-99223538 | MsG0380017658.01.T01:CDS | 40.0% | |
ATGAGAGGAAGGTTATTGGA+CGG | + | Chr3:99222599-99222618 | MsG0380017658.01.T01:CDS | 40.0% | |
ATGCCTTTCCCATGTTCATT+TGG | - | Chr3:99223292-99223311 | None:intergenic | 40.0% | |
ATTACCACACCTGTCATATG+AGG | - | Chr3:99223685-99223704 | None:intergenic | 40.0% | |
CAAAATACCTACCTAGCATC+TGG | - | Chr3:99223106-99223125 | None:intergenic | 40.0% | |
CAATACCTCAATGGCATTTC+AGG | - | Chr3:99222697-99222716 | None:intergenic | 40.0% | |
CAGAACCTTCGCTCATTTAA+TGG | + | Chr3:99223067-99223086 | MsG0380017658.01.T01:CDS | 40.0% | |
CATGTTATGTGCAAGACTAG+TGG | + | Chr3:99222793-99222812 | MsG0380017658.01.T01:CDS | 40.0% | |
CGATTATATGGATTCCCTAG+TGG | + | Chr3:99224084-99224103 | MsG0380017658.01.T01:three_prime_UTR | 40.0% | |
CTTTGCCATTAAATGAGCGA+AGG | - | Chr3:99223075-99223094 | None:intergenic | 40.0% | |
GAGTATAGTGATTCTTTGGG+AGG | + | Chr3:99222469-99222488 | MsG0380017658.01.T01:CDS | 40.0% | |
GCATTAGACCCAAATGAACA+TGG | + | Chr3:99223280-99223299 | MsG0380017658.01.T01:CDS | 40.0% | |
GCTAAGAACTGGTATGAAGA+AGG | + | Chr3:99223530-99223549 | MsG0380017658.01.T01:CDS | 40.0% | |
GCTGCTTCTAATGTTCCATA+TGG | - | Chr3:99223262-99223281 | None:intergenic | 40.0% | |
TAAGTGAGGAACCAGAGAAA+AGG | - | Chr3:99222330-99222349 | None:intergenic | 40.0% | |
TACAGATATGCCTATGCTTG+TGG | + | Chr3:99223352-99223371 | MsG0380017658.01.T01:CDS | 40.0% | |
TCCAATTGTCTCCAATGTGT+CGG | - | Chr3:99222443-99222462 | None:intergenic | 40.0% | |
TCTGGCAATCTCTTCAAAAG+TGG | - | Chr3:99223761-99223780 | None:intergenic | 40.0% | |
TGCCTTTCCCATGTTCATTT+GGG | - | Chr3:99223291-99223310 | None:intergenic | 40.0% | |
TTACCACACCTGTCATATGA+GGG | - | Chr3:99223684-99223703 | None:intergenic | 40.0% | |
TTCCCTTATGGACTTCCATA+TGG | + | Chr3:99223787-99223806 | MsG0380017658.01.T01:CDS | 40.0% | |
! | AGGCACAAAAAATGGTTCTG+AGG | - | Chr3:99223564-99223583 | None:intergenic | 40.0% |
! | ATAGTGTTCAGTAACGGGAA+AGG | - | Chr3:99222665-99222684 | None:intergenic | 40.0% |
! | ATATGGATTGCATGGATGCT+GGG | + | Chr3:99223804-99223823 | MsG0380017658.01.T01:CDS | 40.0% |
! | CCTTATAAAACCAGGGTACT+TGG | + | Chr3:99222552-99222571 | MsG0380017658.01.T01:CDS | 40.0% |
! | TATAAAACCAGGGTACTTGG+TGG | + | Chr3:99222555-99222574 | MsG0380017658.01.T01:CDS | 40.0% |
!! | GGCACAAAAAATGGTTCTGA+GGG | - | Chr3:99223563-99223582 | None:intergenic | 40.0% |
!! | TGCATAAAAGCTTTGGACTC+AGG | - | Chr3:99222775-99222794 | None:intergenic | 40.0% |
!!! | CCAAGTACCCTGGTTTTATA+AGG | - | Chr3:99222555-99222574 | None:intergenic | 40.0% |
!!! | GTACCCTGGTTTTATAAGGT+CGG | - | Chr3:99222551-99222570 | None:intergenic | 40.0% |
!!! | TACCCTGGTTTTATAAGGTC+GGG | - | Chr3:99222550-99222569 | None:intergenic | 40.0% |
!!! | TGAGTTTTCTGAAGTCCCTA+AGG | + | Chr3:99222267-99222286 | MsG0380017658.01.T01:CDS | 40.0% |
AAACTCGCTATCCGTGACAA+TGG | - | Chr3:99222515-99222534 | None:intergenic | 45.0% | |
AACTCGCTATCCGTGACAAT+GGG | - | Chr3:99222514-99222533 | None:intergenic | 45.0% | |
AAGAGGAAGATGAAGATGGG+AGG | + | Chr3:99222975-99222994 | MsG0380017658.01.T01:CDS | 45.0% | |
ACATAGGGGACTACAACTTC+AGG | + | Chr3:99222116-99222135 | MsG0380017658.01.T01:CDS | 45.0% | |
ACTTCAGGCATCTCTTTGAC+GGG | + | Chr3:99222131-99222150 | MsG0380017658.01.T01:CDS | 45.0% | |
AGAGGAAGATGAAGATGGGA+GGG | + | Chr3:99222976-99222995 | MsG0380017658.01.T01:CDS | 45.0% | |
ATCCCCGACCTTATAAAACC+AGG | + | Chr3:99222544-99222563 | MsG0380017658.01.T01:CDS | 45.0% | |
CAATTGTCTCCAATGTGTCG+GGG | - | Chr3:99222441-99222460 | None:intergenic | 45.0% | |
CAGCATCCATGCAATCCATA+TGG | - | Chr3:99223805-99223824 | None:intergenic | 45.0% | |
CCAATTGTCTCCAATGTGTC+GGG | - | Chr3:99222442-99222461 | None:intergenic | 45.0% | |
GACCCAAATGAACATGGGAA+AGG | + | Chr3:99223286-99223305 | MsG0380017658.01.T01:CDS | 45.0% | |
GTCTGACGGAGACACAAAAA+GGG | + | Chr3:99222401-99222420 | MsG0380017658.01.T01:CDS | 45.0% | |
TATTGGACGGGTCGATTGTA+GGG | + | Chr3:99222612-99222631 | MsG0380017658.01.T01:CDS | 45.0% | |
TCCATAAGGGAACTTAGCTC+TGG | - | Chr3:99223779-99223798 | None:intergenic | 45.0% | |
TCCCCGACCTTATAAAACCA+GGG | + | Chr3:99222545-99222564 | MsG0380017658.01.T01:CDS | 45.0% | |
TGAGAGGAAGGTTATTGGAC+GGG | + | Chr3:99222600-99222619 | MsG0380017658.01.T01:CDS | 45.0% | |
TGTCTGACGGAGACACAAAA+AGG | + | Chr3:99222400-99222419 | MsG0380017658.01.T01:CDS | 45.0% | |
TGTTCTACCAGATGCTAGGT+AGG | + | Chr3:99223096-99223115 | MsG0380017658.01.T01:intron | 45.0% | |
TTACATTGGCCCTTCCTGTA+AGG | + | Chr3:99223140-99223159 | MsG0380017658.01.T01:intron | 45.0% | |
TTACCCTCATATGACAGGTG+TGG | + | Chr3:99223678-99223697 | MsG0380017658.01.T01:intron | 45.0% | |
TTATTGGACGGGTCGATTGT+AGG | + | Chr3:99222611-99222630 | MsG0380017658.01.T01:CDS | 45.0% | |
TTCCGAGCACAATACCTCAA+TGG | - | Chr3:99222706-99222725 | None:intergenic | 45.0% | |
TTGTGCCTGAAATGCCATTG+AGG | + | Chr3:99222689-99222708 | MsG0380017658.01.T01:CDS | 45.0% | |
! | ATTGTGCTCGGAATTTGCTC+AGG | + | Chr3:99222713-99222732 | MsG0380017658.01.T01:CDS | 45.0% |
! | CATATGGATTGCATGGATGC+TGG | + | Chr3:99223803-99223822 | MsG0380017658.01.T01:CDS | 45.0% |
! | CGGTTTAGAATACCACTGGA+TGG | + | Chr3:99223232-99223251 | MsG0380017658.01.T01:CDS | 45.0% |
! | GGACTTCCATATGGATTGCA+TGG | + | Chr3:99223796-99223815 | MsG0380017658.01.T01:CDS | 45.0% |
! | GTTCAGTAACGGGAAAGGAA+TGG | - | Chr3:99222660-99222679 | None:intergenic | 45.0% |
! | TGGTCGGTTTAGAATACCAC+TGG | + | Chr3:99223228-99223247 | MsG0380017658.01.T01:CDS | 45.0% |
! | TTGTGCTCGGAATTTGCTCA+GGG | + | Chr3:99222714-99222733 | MsG0380017658.01.T01:CDS | 45.0% |
!! | AACTGGCTCTAATGAGAGGA+AGG | + | Chr3:99222588-99222607 | MsG0380017658.01.T01:CDS | 45.0% |
!! | GATTTTGAAGGTGGCAAGTG+TGG | + | Chr3:99222910-99222929 | MsG0380017658.01.T01:intron | 45.0% |
!! | TGCCATTGAGGTATTGTGCT+CGG | + | Chr3:99222701-99222720 | MsG0380017658.01.T01:CDS | 45.0% |
!! | TGGAAACTGGCTCTAATGAG+AGG | + | Chr3:99222584-99222603 | MsG0380017658.01.T01:CDS | 45.0% |
!!! | ACCCTGGTTTTATAAGGTCG+GGG | - | Chr3:99222549-99222568 | None:intergenic | 45.0% |
!!! | ATTAATTTTGTTTTTAATTT+TGG | + | Chr3:99222882-99222901 | MsG0380017658.01.T01:intron | 5.0% |
AGATTCAACTTGCCGATGGC+CGG | - | Chr3:99222203-99222222 | None:intergenic | 50.0% | |
AGTGATAGACCCCGACACAT+TGG | + | Chr3:99222429-99222448 | MsG0380017658.01.T01:CDS | 50.0% | |
ATTGGACGGGTCGATTGTAG+GGG | + | Chr3:99222613-99222632 | MsG0380017658.01.T01:CDS | 50.0% | |
CCACTGGATGGAAGTCCATA+TGG | + | Chr3:99223244-99223263 | MsG0380017658.01.T01:CDS | 50.0% | |
CCATATGGACTTCCATCCAG+TGG | - | Chr3:99223247-99223266 | None:intergenic | 50.0% | |
CCCGACACATTGGAGACAAT+TGG | + | Chr3:99222439-99222458 | MsG0380017658.01.T01:CDS | 50.0% | |
CCTGAGATTCAACTTGCCGA+TGG | - | Chr3:99222207-99222226 | None:intergenic | 50.0% | |
CCTGGTCGAGGCACAAAAAA+TGG | - | Chr3:99223572-99223591 | None:intergenic | 50.0% | |
CTCTGCACATCCCATTGTCA+CGG | + | Chr3:99222501-99222520 | MsG0380017658.01.T01:CDS | 50.0% | |
CTTACCGACAATGCCAACAC+AGG | + | Chr3:99222346-99222365 | MsG0380017658.01.T01:CDS | 50.0% | |
GAGGGTGACTGCTGTTATTG+CGG | + | Chr3:99222994-99223013 | MsG0380017658.01.T01:CDS | 50.0% | |
GCCAGAGCTAAGTTCCCTTA+TGG | + | Chr3:99223775-99223794 | MsG0380017658.01.T01:CDS | 50.0% | |
GGAGCAACAGAGGAAGATGA+TGG | + | Chr3:99223590-99223609 | MsG0380017658.01.T01:CDS | 50.0% | |
GTTGGCATTGTCGGTAAGTG+AGG | - | Chr3:99222344-99222363 | None:intergenic | 50.0% | |
TCATCTTCCTCTGTTGCTCC+TGG | - | Chr3:99223590-99223609 | None:intergenic | 50.0% | |
TGTGTCGGGGTCTATCACTA+TGG | - | Chr3:99222428-99222447 | None:intergenic | 50.0% | |
! | AGTAACCTTGGTGAGGGTGT+TGG | - | Chr3:99223401-99223420 | None:intergenic | 50.0% |
! | CCATCGGCAAGTTGAATCTC+AGG | + | Chr3:99222204-99222223 | MsG0380017658.01.T01:CDS | 50.0% |
! | GAGCTAGCAAGCCTTTTCTC+TGG | + | Chr3:99222316-99222335 | MsG0380017658.01.T01:CDS | 50.0% |
!! | AGGGTGTTGGGGAAGTTACA+AGG | - | Chr3:99223388-99223407 | None:intergenic | 50.0% |
!! | GGGTGTTGGGGAAGTTACAA+GGG | - | Chr3:99223387-99223406 | None:intergenic | 50.0% |
!! | GTAACCTTGGTGAGGGTGTT+GGG | - | Chr3:99223400-99223419 | None:intergenic | 50.0% |
!! | TAACCTTGGTGAGGGTGTTG+GGG | - | Chr3:99223399-99223418 | None:intergenic | 50.0% |
!!! | CCATTTTTTGTGCCTCGACC+AGG | + | Chr3:99223569-99223588 | MsG0380017658.01.T01:CDS | 50.0% |
AACACAGGCGTGGTGAAGCT+CGG | + | Chr3:99222361-99222380 | MsG0380017658.01.T01:CDS | 55.0% | |
GGAAAGGAATGGACCCAACC+GGG | - | Chr3:99222649-99222668 | None:intergenic | 55.0% | |
GGGAAAGGAATGGACCCAAC+CGG | - | Chr3:99222650-99222669 | None:intergenic | 55.0% | |
! | CACGCCTGTGTTGGCATTGT+CGG | - | Chr3:99222353-99222372 | None:intergenic | 55.0% |
! | TGGGAGGGTGGTTTGTCTGA+CGG | + | Chr3:99222387-99222406 | MsG0380017658.01.T01:CDS | 55.0% |
!! | TTGGTGGCGAGGATGGAAAC+TGG | + | Chr3:99222571-99222590 | MsG0380017658.01.T01:CDS | 55.0% |
ATCCTCGCCACCAAGTACCC+TGG | - | Chr3:99222565-99222584 | None:intergenic | 60.0% | |
CGACAATGCCAACACAGGCG+TGG | + | Chr3:99222351-99222370 | MsG0380017658.01.T01:CDS | 60.0% | |
CTCGAAGTGAAGGCCGACCA+AGG | - | Chr3:99222164-99222183 | None:intergenic | 60.0% | |
CTTCCCCAACACCCTCACCA+AGG | + | Chr3:99223393-99223412 | MsG0380017658.01.T01:CDS | 60.0% | |
CTTGGTCGGCCTTCACTTCG+AGG | + | Chr3:99222162-99222181 | MsG0380017658.01.T01:CDS | 60.0% | |
GAAGTGAAGGCCGACCAAGG+TGG | - | Chr3:99222161-99222180 | None:intergenic | 60.0% | |
GAGCTTCACCACGCCTGTGT+TGG | - | Chr3:99222362-99222381 | None:intergenic | 60.0% | |
GCGCTGTGCTCCACAAGCAT+AGG | - | Chr3:99223365-99223384 | None:intergenic | 60.0% | |
GTCGGCCTTCACTTCGAGGA+CGG | + | Chr3:99222166-99222185 | MsG0380017658.01.T01:CDS | 60.0% | |
TCCTCTGTTGCTCCTGGTCG+AGG | - | Chr3:99223584-99223603 | None:intergenic | 60.0% | |
TCGGCCTTCACTTCGAGGAC+GGG | + | Chr3:99222167-99222186 | MsG0380017658.01.T01:CDS | 60.0% | |
TGTAGGGGCGGTACATCACC+CGG | + | Chr3:99222628-99222647 | MsG0380017658.01.T01:CDS | 60.0% | |
! | CTTTGACGGGTACGCCACCT+TGG | + | Chr3:99222144-99222163 | MsG0380017658.01.T01:CDS | 60.0% |
! | GCTTGCTAGCTCCCCTACGT+AGG | - | Chr3:99222308-99222327 | None:intergenic | 60.0% |
!! | AACCAGGGTACTTGGTGGCG+AGG | + | Chr3:99222560-99222579 | MsG0380017658.01.T01:CDS | 60.0% |
!! | AGGGTACTTGGTGGCGAGGA+TGG | + | Chr3:99222564-99222583 | MsG0380017658.01.T01:CDS | 60.0% |
ACCGCCCGTCCTCGAAGTGA+AGG | - | Chr3:99222174-99222193 | None:intergenic | 65.0% | |
GACGGGTACGCCACCTTGGT+CGG | + | Chr3:99222148-99222167 | MsG0380017658.01.T01:CDS | 65.0% | |
GAGGACGGGCGGTTAGTAGC+CGG | + | Chr3:99222181-99222200 | MsG0380017658.01.T01:CDS | 65.0% | |
GCCTCGACCAGGAGCAACAG+AGG | + | Chr3:99223580-99223599 | MsG0380017658.01.T01:CDS | 65.0% | |
GCCTTCACTTCGAGGACGGG+CGG | + | Chr3:99222170-99222189 | MsG0380017658.01.T01:CDS | 65.0% | |
GCGTGGTGAAGCTCGGCGAT+GGG | + | Chr3:99222368-99222387 | MsG0380017658.01.T01:CDS | 65.0% | |
GGACGGGTCGATTGTAGGGG+CGG | + | Chr3:99222616-99222635 | MsG0380017658.01.T01:CDS | 65.0% | |
GGCGGTTAGTAGCCGGCCAT+CGG | + | Chr3:99222188-99222207 | MsG0380017658.01.T01:CDS | 65.0% | |
GGGCGGTACATCACCCGGTT+GGG | + | Chr3:99222633-99222652 | MsG0380017658.01.T01:CDS | 65.0% | |
GGTGAAGCTCGGCGATGGGA+GGG | + | Chr3:99222372-99222391 | MsG0380017658.01.T01:CDS | 65.0% | |
TGGTGAAGCTCGGCGATGGG+AGG | + | Chr3:99222371-99222390 | MsG0380017658.01.T01:CDS | 65.0% | |
GAAGCTCGGCGATGGGAGGG+TGG | + | Chr3:99222375-99222394 | MsG0380017658.01.T01:CDS | 70.0% | |
GGCGTGGTGAAGCTCGGCGA+TGG | + | Chr3:99222367-99222386 | MsG0380017658.01.T01:CDS | 70.0% | |
GGGGCGGTACATCACCCGGT+TGG | + | Chr3:99222632-99222651 | MsG0380017658.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 99222109 | 99224113 | 99222109 | ID=MsG0380017658.01;Name=MsG0380017658.01 |
Chr3 | mRNA | 99222109 | 99224113 | 99222109 | ID=MsG0380017658.01.T01;Parent=MsG0380017658.01;Name=MsG0380017658.01.T01;_AED=0.44;_eAED=0.44;_QI=0|1|0.8|1|1|1|5|273|448 |
Chr3 | exon | 99222109 | 99222822 | 99222109 | ID=MsG0380017658.01.T01:exon:27196;Parent=MsG0380017658.01.T01 |
Chr3 | exon | 99222920 | 99223113 | 99222920 | ID=MsG0380017658.01.T01:exon:27197;Parent=MsG0380017658.01.T01 |
Chr3 | exon | 99223225 | 99223414 | 99223225 | ID=MsG0380017658.01.T01:exon:27198;Parent=MsG0380017658.01.T01 |
Chr3 | exon | 99223509 | 99223611 | 99223509 | ID=MsG0380017658.01.T01:exon:27199;Parent=MsG0380017658.01.T01 |
Chr3 | exon | 99223695 | 99224113 | 99223695 | ID=MsG0380017658.01.T01:exon:27200;Parent=MsG0380017658.01.T01 |
Chr3 | CDS | 99222109 | 99222822 | 99222109 | ID=MsG0380017658.01.T01:cds;Parent=MsG0380017658.01.T01 |
Chr3 | CDS | 99222920 | 99223113 | 99222920 | ID=MsG0380017658.01.T01:cds;Parent=MsG0380017658.01.T01 |
Chr3 | CDS | 99223225 | 99223414 | 99223225 | ID=MsG0380017658.01.T01:cds;Parent=MsG0380017658.01.T01 |
Chr3 | CDS | 99223509 | 99223611 | 99223509 | ID=MsG0380017658.01.T01:cds;Parent=MsG0380017658.01.T01 |
Chr3 | CDS | 99223695 | 99223840 | 99223695 | ID=MsG0380017658.01.T01:cds;Parent=MsG0380017658.01.T01 |
Chr3 | three_prime_UTR | 99223841 | 99224113 | 99223841 | ID=MsG0380017658.01.T01:three_prime_utr;Parent=MsG0380017658.01.T01 |
Gene Sequence |
Protein sequence |