AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011016.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011016.01.T01 MTR_2g096670 96.370 799 23 3 1 798 1 794 0.0 1566
MsG0280011016.01.T01 MTR_7g099710 39.474 798 450 11 18 796 14 797 0.0 566
MsG0280011016.01.T01 MTR_7g073075 46.237 93 49 1 82 174 16 107 2.09e-16 76.6
MsG0280011016.01.T01 MTR_7g063050 44.086 93 51 1 82 174 16 107 6.31e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011016.01.T01 AT2G28780 49.114 790 376 11 18 798 10 782 0.0 702
MsG0280011016.01.T01 AT3G09450 37.992 787 439 15 19 781 6 767 8.95e-145 445

Find 175 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACCACATTACAATAAAT+TGG 0.110040 2:-78389677 MsG0280011016.01.T01:CDS
ACGAAGGTAACGACGATAAA+TGG 0.135921 2:-78389285 MsG0280011016.01.T01:CDS
GTCCAGCTATGTTGAGTTTA+TGG 0.169702 2:-78395336 MsG0280011016.01.T01:CDS
GAGGATGACACGTGGCTTTC+GGG 0.213052 2:-78388299 MsG0280011016.01.T01:CDS
GGCACATGTTGAAGCCCTTT+TGG 0.213590 2:+78388790 None:intergenic
GTGTGTTTAGACCATGTTTA+AGG 0.223189 2:+78389560 None:intergenic
ACGACGATAAATGGGCTAAT+TGG 0.230812 2:-78389276 MsG0280011016.01.T01:CDS
TAGTGGTGATCTCTCCATTT+TGG 0.233423 2:+78395609 None:intergenic
GTAGCTGGTGCAACACTTTA+TGG 0.234606 2:-78395499 MsG0280011016.01.T01:CDS
ACATTGGGAGAGTTCATATT+TGG 0.246253 2:+78388769 None:intergenic
AGTTTCGATGATTCTTTCTA+TGG 0.249865 2:+78388859 None:intergenic
GGCTGGGCTTGGACATTTGT+TGG 0.261014 2:+78389331 None:intergenic
TGACACGTGGCTTTCGGGTT+TGG 0.276642 2:-78388294 MsG0280011016.01.T01:CDS
TTCATAGTGGTTGCTATAAT+AGG 0.277095 2:-78388589 MsG0280011016.01.T01:CDS
GTGGCATTTCGGCTGTGATT+GGG 0.280433 2:-78388931 MsG0280011016.01.T01:CDS
GACACGTGGCTTTCGGGTTT+GGG 0.284107 2:-78388293 MsG0280011016.01.T01:CDS
ATAGCAAAGAAAGTGGTTTC+TGG 0.285067 2:-78389168 MsG0280011016.01.T01:CDS
GGTGGCATTTCGGCTGTGAT+TGG 0.293729 2:-78388932 MsG0280011016.01.T01:CDS
AGCTTCTATTGCTGTGGCTT+TGG 0.297296 2:-78395281 MsG0280011016.01.T01:CDS
AAAATGCAGGGAATGTTATT+AGG 0.304540 2:+78395458 None:intergenic
TGGGCCTGCGGGTGGCATTT+CGG 0.304664 2:-78388942 MsG0280011016.01.T01:CDS
AGAGGATGACACGTGGCTTT+CGG 0.307613 2:-78388300 MsG0280011016.01.T01:CDS
GTTCCTTTAGAGAAATGATT+TGG 0.308003 2:+78395304 None:intergenic
TATGCTACAATTCAAAGTTT+AGG 0.311346 2:-78395358 MsG0280011016.01.T01:CDS
GCTGGGCTTGGACATTTGTT+GGG 0.315602 2:+78389332 None:intergenic
ATCATAAATGATGCTACTTT+AGG 0.316843 2:-78395412 MsG0280011016.01.T01:CDS
AATCTCTCGTGCTAAGTCTT+TGG 0.317198 2:-78390105 MsG0280011016.01.T01:CDS
TTGGCAGCTAGTACTGCTTT+AGG 0.328010 2:-78395121 MsG0280011016.01.T01:CDS
GATAGCTAAGAGAATTTCAT+TGG 0.329080 2:-78395218 MsG0280011016.01.T01:CDS
AATTTCTTCAAGACCTTTGA+TGG 0.337569 2:+78388406 None:intergenic
TCCACACTTGTTGAATCAAT+TGG 0.347555 2:-78388743 MsG0280011016.01.T01:CDS
GAAGGAGTTTGGCACAAAAT+AGG 0.348823 2:+78389377 None:intergenic
TCCAGCTATGTTGAGTTTAT+GGG 0.350617 2:-78395335 MsG0280011016.01.T01:CDS
TTAGACCATGTTTAAGGTCT+TGG 0.362507 2:+78389566 None:intergenic
AAATGAATAGGATGCATAAT+AGG 0.364653 2:+78395142 None:intergenic
AAAGAAAGTGGTTTCTGGTC+TGG 0.364944 2:-78389163 MsG0280011016.01.T01:CDS
TCTTTACGTGGTTGTTGGCT+AGG 0.368993 2:-78395385 MsG0280011016.01.T01:CDS
GATTGTGTTGGTGTATGTAT+TGG 0.369068 2:-78395191 MsG0280011016.01.T01:CDS
GTTGATTGGGAATGATTTGT+AGG 0.373147 2:+78389597 None:intergenic
CATGTCTAATGATGTTGAAA+TGG 0.374095 2:-78388333 MsG0280011016.01.T01:CDS
TAGCAAAACTGATTCACAAT+TGG 0.376735 2:-78388705 MsG0280011016.01.T01:CDS
CGACGATAAATGGGCTAATT+GGG 0.377900 2:-78389275 MsG0280011016.01.T01:CDS
AAGTGTTGCACCAGCTACTA+TGG 0.379492 2:+78395504 None:intergenic
TATTATGCATCCTATTCATT+TGG 0.379859 2:-78395140 MsG0280011016.01.T01:CDS
ATTGGGCCTATCAGTCTTCA+TGG 0.382307 2:-78389200 MsG0280011016.01.T01:CDS
CAATCTAATAGGAATGGAAT+TGG 0.385293 2:-78389629 MsG0280011016.01.T01:CDS
TCCTTGGGCTTTAACATTTG+CGG 0.386987 2:+78389090 None:intergenic
CAATTCCATTCCTATTAGAT+TGG 0.387246 2:+78389630 None:intergenic
TGATTTCATGTGAAGGAGTT+TGG 0.391065 2:+78389366 None:intergenic
AAACTTGAATGATTTCATCT+TGG 0.393368 2:+78388382 None:intergenic
AAGAAAGTGGTTTCTGGTCT+GGG 0.393614 2:-78389162 MsG0280011016.01.T01:CDS
AAACCACATTACAATAAATT+GGG 0.395638 2:-78389676 MsG0280011016.01.T01:CDS
TATGTATTGGCTTATTCTAA+TGG 0.398544 2:-78395178 MsG0280011016.01.T01:CDS
TTGGACATTTGTTGGGCCCT+CGG 0.399774 2:+78389339 None:intergenic
ATGTTGAGTTTATGGGCTAT+AGG 0.405854 2:-78395328 MsG0280011016.01.T01:CDS
CTTTCTATGGCGAACTCGCT+TGG 0.406770 2:+78388872 None:intergenic
ATAAAGTACTCTTTCGCATT+GGG 0.406934 2:-78389217 MsG0280011016.01.T01:CDS
CTTCAACGAAGCCGTATGTA+TGG 0.407950 2:-78388962 MsG0280011016.01.T01:CDS
GAGGTAGATACCAATCTAAT+AGG 0.411762 2:-78389640 MsG0280011016.01.T01:CDS
CTTTCGGGTTTGGGAGAAGA+TGG 0.412988 2:-78388284 MsG0280011016.01.T01:CDS
AGGCTCATTATCAAAGTTAG+TGG 0.415380 2:-78388561 MsG0280011016.01.T01:CDS
CGAAGGTAACGACGATAAAT+GGG 0.417608 2:-78389284 MsG0280011016.01.T01:CDS
AAGTGAACTTCTACATGTTA+AGG 0.424106 2:-78388444 MsG0280011016.01.T01:CDS
AAAGCCCAAGGAACGGTGAT+TGG 0.424570 2:-78389079 MsG0280011016.01.T01:CDS
GTGACTCTTTACGTGGTTGT+TGG 0.428893 2:-78395390 MsG0280011016.01.T01:CDS
CAGTTCCAATCACCGTTCCT+TGG 0.432211 2:+78389074 None:intergenic
TAATGAGCTTAGAAAATTTG+TGG 0.433373 2:-78388651 MsG0280011016.01.T01:CDS
GAGATCACCACTAAACCTTA+TGG 0.433380 2:-78395599 MsG0280011016.01.T01:CDS
GTGGCCGTAAGCTATGTTTC+AGG 0.434352 2:-78389133 MsG0280011016.01.T01:CDS
GGTAATTCTTGGTGAGTTGT+TGG 0.437818 2:+78389412 None:intergenic
AGTTCCAATCACCGTTCCTT+GGG 0.438721 2:+78389075 None:intergenic
ATTAGGCTTGTAATTGAAGT+AGG 0.441014 2:+78395475 None:intergenic
GGTCCAAATCATTTCTCTAA+AGG 0.442276 2:-78395307 MsG0280011016.01.T01:CDS
GATTCTTGTCACTACTTCCA+TGG 0.446613 2:-78389003 MsG0280011016.01.T01:CDS
TGTTTGAGTGTGTGCATGCA+TGG 0.447803 2:-78388140 MsG0280011016.01.T01:CDS
GTACTAGCTGCCAAATGAAT+AGG 0.450169 2:+78395130 None:intergenic
AATGCTAAACACTCTTTCCT+TGG 0.451588 2:-78389508 MsG0280011016.01.T01:CDS
CTTTACGTGGTTGTTGGCTA+GGG 0.455719 2:-78395384 MsG0280011016.01.T01:CDS
GAGATTGAAGATTCTTGTAA+AGG 0.459077 2:-78390165 MsG0280011016.01.T01:CDS
AGAAAATCAAAGAAAACTTA+AGG 0.461877 2:-78388681 MsG0280011016.01.T01:CDS
AGCAAAACTGATTCACAATT+GGG 0.462198 2:-78388704 MsG0280011016.01.T01:CDS
ATTATTTGCTCTTCCATCAA+AGG 0.463540 2:-78388419 MsG0280011016.01.T01:CDS
TTATAGCAACCACTATGAAA+TGG 0.463626 2:+78388593 None:intergenic
TGTTGAAGAAACTCACCATA+AGG 0.464536 2:+78395584 None:intergenic
AAACACTCTTTCCTTGGTGG+TGG 0.466264 2:-78389502 MsG0280011016.01.T01:CDS
TCTTGGTCAAGAATGTTGAT+TGG 0.470206 2:+78389583 None:intergenic
CTTGGTCAAGAATGTTGATT+GGG 0.470663 2:+78389584 None:intergenic
CACAAATTAAATACTGCTAG+AGG 0.471828 2:+78388067 None:intergenic
CAATGAGGGAACTTGTTCAA+TGG 0.474839 2:-78388097 MsG0280011016.01.T01:CDS
ATAAGCCCATGAAGACTGAT+AGG 0.475203 2:+78389194 None:intergenic
GGAACTGTGTACGGTGTGTT+GGG 0.476790 2:-78389058 MsG0280011016.01.T01:CDS
CATACATACGGCTTCGTTGA+AGG 0.483582 2:+78388963 None:intergenic
GACAAGGAGCTTGGTTCGCT+TGG 0.486715 2:+78390079 None:intergenic
CACCCGCAGGCCCATACATA+CGG 0.486745 2:+78388951 None:intergenic
AATGAGGGAACTTGTTCAAT+GGG 0.487246 2:-78388096 MsG0280011016.01.T01:CDS
GTATAGTGATGAAGGTGAGA+AGG 0.487410 2:-78388207 MsG0280011016.01.T01:CDS
GGCTTTGGCTGCATTTGTTG+TGG 0.488680 2:-78395266 MsG0280011016.01.T01:CDS
TGGAACTGTGTACGGTGTGT+TGG 0.488951 2:-78389059 MsG0280011016.01.T01:CDS
AAACTCACCATAAGGTTTAG+TGG 0.489783 2:+78395592 None:intergenic
TCTCCCAATTTATTGTAATG+TGG 0.490806 2:+78389673 None:intergenic
GCCCATAAACTCAACATAGC+TGG 0.491924 2:+78395334 None:intergenic
CAACAAGTGTGGACAAACAT+TGG 0.496700 2:+78388753 None:intergenic
AACAAGTGTGGACAAACATT+GGG 0.497246 2:+78388754 None:intergenic
ATGTCTAATGATGTTGAAAT+GGG 0.497914 2:-78388332 MsG0280011016.01.T01:CDS
GCTTAGAAAATTTGTGGTAG+AGG 0.499718 2:-78388645 MsG0280011016.01.T01:CDS
AACATTTGCGGCCCGAAAAG+TGG 0.502931 2:+78389102 None:intergenic
CTATGGCGAACTCGCTTGGT+GGG 0.507072 2:+78388876 None:intergenic
GATAAAGTACTCTTTCGCAT+TGG 0.507856 2:-78389218 MsG0280011016.01.T01:CDS
TGGCATTTCGGCTGTGATTG+GGG 0.516872 2:-78388930 MsG0280011016.01.T01:CDS
TCTATGGCGAACTCGCTTGG+TGG 0.517047 2:+78388875 None:intergenic
TTCATTGGGTCAGATTGTGT+TGG 0.518394 2:-78395203 MsG0280011016.01.T01:CDS
CATGATGGTGACAAGGAGCT+TGG 0.520052 2:+78390070 None:intergenic
GCTAAACACTCTTTCCTTGG+TGG 0.523877 2:-78389505 MsG0280011016.01.T01:CDS
AGCCGTATGTATGGGCCTGC+GGG 0.529646 2:-78388953 MsG0280011016.01.T01:CDS
CGAAAGAGTACTTTATCGCC+GGG 0.530456 2:+78389224 None:intergenic
ATAGCTAAGAGAATTTCATT+GGG 0.530885 2:-78395217 MsG0280011016.01.T01:CDS
GTTTGAGTGTGTGCATGCAT+GGG 0.535759 2:-78388139 MsG0280011016.01.T01:CDS
TTAGCTTGCACCATAGTAGC+TGG 0.538892 2:-78395514 MsG0280011016.01.T01:CDS
GAGGAAAATACTTCTGCACT+TGG 0.539006 2:-78390131 MsG0280011016.01.T01:CDS
TTGGGCCTATCAGTCTTCAT+GGG 0.541653 2:-78389199 MsG0280011016.01.T01:CDS
AGATACCAATCTAATAGGAA+TGG 0.545673 2:-78389635 MsG0280011016.01.T01:CDS
AGCTACTATGGTGCAAGCTA+AGG 0.550762 2:+78395516 None:intergenic
AGAGATTGAAAAGGCAATGA+GGG 0.552190 2:-78388111 MsG0280011016.01.T01:CDS
GCGAAAGAGTACTTTATCGC+CGG 0.552881 2:+78389223 None:intergenic
TAGTGATGAAGGTGAGAAGG+AGG 0.554892 2:-78388204 MsG0280011016.01.T01:CDS
ACAACCACGTATGAAAATGC+AGG 0.556350 2:+78395445 None:intergenic
GAAAAGCTCAAATCTTCTCC+CGG 0.557561 2:-78389242 MsG0280011016.01.T01:CDS
TCCAATTGATTCAACAAGTG+TGG 0.561122 2:+78388742 None:intergenic
GAGAAGTTGTATAGTGATGA+AGG 0.561390 2:-78388215 MsG0280011016.01.T01:CDS
GTGAATAGGATGGCATGAAG+TGG 0.561615 2:-78389723 MsG0280011016.01.T01:intron
CGTATGTATGGGCCTGCGGG+TGG 0.561768 2:-78388950 MsG0280011016.01.T01:CDS
TCTTGTAAAGGTAATTAGTG+AGG 0.562334 2:-78390153 MsG0280011016.01.T01:CDS
TTCTTGGTGAGTTGTTGGAA+TGG 0.566246 2:+78389417 None:intergenic
TGGGACAATAGAGATTGAAA+AGG 0.566574 2:-78388120 MsG0280011016.01.T01:CDS
TAGCAAGCAAAACGAGGGTA+AGG 0.567321 2:+78395067 None:intergenic
TGAATAGGATGGCATGAAGT+GGG 0.567763 2:-78389722 MsG0280011016.01.T01:intron
TTCAACGAAGCCGTATGTAT+GGG 0.573243 2:-78388961 MsG0280011016.01.T01:CDS
ACAGCCGAAATGCCACCCGC+AGG 0.576761 2:+78388938 None:intergenic
GAGTTGTTGGAATGGTATGA+AGG 0.577072 2:+78389425 None:intergenic
TTTAGGTGTACTTGCTTGTG+TGG 0.579366 2:-78395104 MsG0280011016.01.T01:CDS
TGTAAAGGTAATTAGTGAGG+AGG 0.580554 2:-78390150 MsG0280011016.01.T01:CDS
GCCGCAAATGTTAAAGCCCA+AGG 0.580581 2:-78389091 MsG0280011016.01.T01:CDS
TCTTCAACATTCCACCATTG+TGG 0.583422 2:-78395570 MsG0280011016.01.T01:CDS
GAAACATAGCTTACGGCCAC+GGG 0.584089 2:+78389136 None:intergenic
TCTACCTGAAACATAGCTTA+CGG 0.586470 2:+78389129 None:intergenic
ATCAAATGTGTTGATTGAGA+AGG 0.588852 2:+78395238 None:intergenic
TACTATGGTGCAAGCTAAGG+CGG 0.590061 2:+78395519 None:intergenic
AAGCCGTATGTATGGGCCTG+CGG 0.590070 2:-78388954 MsG0280011016.01.T01:CDS
CTTGACCAAGACCTTAAACA+TGG 0.594831 2:-78389571 MsG0280011016.01.T01:CDS
TTTCTGGTCTGGGCTTCCCG+TGG 0.596132 2:-78389152 MsG0280011016.01.T01:CDS
AGGAACAGCTTCTATTGCTG+TGG 0.597039 2:-78395287 MsG0280011016.01.T01:CDS
TAGAGATTGAAAAGGCAATG+AGG 0.600885 2:-78388112 MsG0280011016.01.T01:CDS
CGGTTGATGATTTCATGTGA+AGG 0.604472 2:+78389359 None:intergenic
TGAAACATAGCTTACGGCCA+CGG 0.608815 2:+78389135 None:intergenic
ACAAATTAAATACTGCTAGA+GGG 0.609318 2:+78388068 None:intergenic
ACCTGGTAGCAAGCAAAACG+AGG 0.611529 2:+78395061 None:intergenic
ACTTACTAGGTAGCGCATGA+TGG 0.612005 2:+78390055 None:intergenic
ACGGTGATTGGAACTGTGTA+CGG 0.612228 2:-78389067 MsG0280011016.01.T01:CDS
TTATTGTATAGCAAAGAAAG+TGG 0.612494 2:-78389175 MsG0280011016.01.T01:CDS
AGACACTCTCTCCACAATGG+TGG 0.614352 2:+78395559 None:intergenic
AGTTGTTGGAATGGTATGAA+GGG 0.627832 2:+78389426 None:intergenic
ACTTTAGGTGACTCTTTACG+TGG 0.633071 2:-78395397 MsG0280011016.01.T01:CDS
AAACTTGTGAAAATGAACCA+TGG 0.633234 2:+78388986 None:intergenic
CAACCACGTATGAAAATGCA+GGG 0.636482 2:+78395446 None:intergenic
ACATGGTCTAAACACACTTG+AGG 0.636524 2:-78389554 MsG0280011016.01.T01:CDS
CACATGAAATCATCAACCGA+GGG 0.643413 2:-78389355 MsG0280011016.01.T01:CDS
TGAAATGGGAAAGTCAAGAG+AGG 0.644013 2:-78388318 MsG0280011016.01.T01:CDS
AAATGTTAAAGCCCAAGGAA+CGG 0.649091 2:-78389086 MsG0280011016.01.T01:CDS
GAGAGACACTCTCTCCACAA+TGG 0.669619 2:+78395556 None:intergenic
ATTGGGAGAGAAACTTCAAG+AGG 0.670648 2:-78389659 MsG0280011016.01.T01:CDS
TCACATGAAATCATCAACCG+AGG 0.671809 2:-78389356 MsG0280011016.01.T01:CDS
GGTAGCGCATGATGGTGACA+AGG 0.690763 2:+78390063 None:intergenic
CCTGGTAGCAAGCAAAACGA+GGG 0.704969 2:+78395062 None:intergenic
CAGTAAGTGAACCACCACCA+AGG 0.716844 2:+78389491 None:intergenic
AGTCAAGAGAGGATGACACG+TGG 0.753312 2:-78388307 MsG0280011016.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATGAAAAAACATA+TGG + Chr2:78391743-78391762 None:intergenic 10.0%
!! AAAAAATATTAAAACCAAAA+TGG - Chr2:78387978-78387997 MsG0280011016.01.T01:three_prime_UTR 10.0%
!! AAGAAATATATACTTATTAT+AGG - Chr2:78392502-78392521 MsG0280011016.01.T01:intron 10.0%
!! AATTTAAACAATATATATAG+AGG - Chr2:78392030-78392049 MsG0280011016.01.T01:intron 10.0%
!! ATTAAGTATTTATTCATATA+AGG + Chr2:78391871-78391890 None:intergenic 10.0%
!!! AATAATGTGTAATTTTAATT+AGG + Chr2:78391218-78391237 None:intergenic 10.0%
!!! ACATTTTATTTTTATTTTGA+AGG + Chr2:78391493-78391512 None:intergenic 10.0%
!!! ATTTTGGTTTTAATATTTTT+TGG + Chr2:78387979-78387998 None:intergenic 10.0%
!! AAAAAGAAATGAAATTGAAA+AGG - Chr2:78395631-78395650 MsG0280011016.01.T01:five_prime_UTR 15.0%
!! AAACAAATACAATTAATACA+CGG + Chr2:78393852-78393871 None:intergenic 15.0%
!! AATTTAATGAAAATTTGTAG+AGG + Chr2:78391399-78391418 None:intergenic 15.0%
!! ATATTATAAATTACTCAAAG+TGG + Chr2:78389860-78389879 None:intergenic 15.0%
!! CAAAAAAAAAATAGATATGT+GGG + Chr2:78392980-78392999 None:intergenic 15.0%
!! TATTCAAAGTTATATATATG+AGG + Chr2:78392231-78392250 None:intergenic 15.0%
!! TCAAAAAAAAAATAGATATG+TGG + Chr2:78392981-78393000 None:intergenic 15.0%
!! TTAAGTCTTAATACATAATA+TGG + Chr2:78393811-78393830 None:intergenic 15.0%
!! TTTATTTAATGTATTTGAAG+AGG + Chr2:78391437-78391456 None:intergenic 15.0%
!!! AAGTTCAGTATTTTAAATTA+AGG + Chr2:78393707-78393726 None:intergenic 15.0%
!!! ACTTTTTTTCATATGTAAAA+TGG - Chr2:78388608-78388627 MsG0280011016.01.T01:CDS 15.0%
!!! TTTATTTTATTTTCCTAAAG+TGG + Chr2:78392805-78392824 None:intergenic 15.0%
!! AAACCACATTACAATAAATT+GGG - Chr2:78393925-78393944 MsG0280011016.01.T01:intron 20.0%
!! AACAAATACAATTAATACAC+GGG + Chr2:78393851-78393870 None:intergenic 20.0%
!! AAGAAAATGATAAAATTACC+TGG + Chr2:78388560-78388579 None:intergenic 20.0%
!! AATGGTAAAAACCAAAAATT+AGG + Chr2:78394993-78395012 None:intergenic 20.0%
!! ACTAAGTCATAAATATCAAT+TGG - Chr2:78391515-78391534 MsG0280011016.01.T01:intron 20.0%
!! AGAAAATCAAAGAAAACTTA+AGG - Chr2:78394920-78394939 MsG0280011016.01.T01:intron 20.0%
!! ATATAAACTATTTCATAGCA+TGG + Chr2:78388643-78388662 None:intergenic 20.0%
!! ATTTGAGAAACATAATTCAA+GGG - Chr2:78392683-78392702 MsG0280011016.01.T01:intron 20.0%
!! GTAAATCATTAGGATTAATT+GGG - Chr2:78392721-78392740 MsG0280011016.01.T01:intron 20.0%
!! TATTAGTTACAATTCACATA+GGG + Chr2:78393180-78393199 None:intergenic 20.0%
!! TATTTCTTCTCATATGATTA+GGG - Chr2:78391625-78391644 MsG0280011016.01.T01:intron 20.0%
!! TATTTGAGAAACATAATTCA+AGG - Chr2:78392682-78392701 MsG0280011016.01.T01:intron 20.0%
!! TGTGGTTTGAAAAAATTAAT+TGG + Chr2:78393913-78393932 None:intergenic 20.0%
!! TTATTAGTTACAATTCACAT+AGG + Chr2:78393181-78393200 None:intergenic 20.0%
!! TTGTTTAAATTGATATGACT+AGG + Chr2:78392021-78392040 None:intergenic 20.0%
!!! AGAAATTTCTTTTTTGTGAA+TGG + Chr2:78394295-78394314 None:intergenic 20.0%
!!! ATAGCGAAATTTTAATTTCA+CGG - Chr2:78389477-78389496 MsG0280011016.01.T01:CDS 20.0%
!!! CAATTTTCAACAACTTTTTA+GGG + Chr2:78392191-78392210 None:intergenic 20.0%
!!! CAGTATTTTAAATTAAGGTA+TGG + Chr2:78393702-78393721 None:intergenic 20.0%
!!! GAAATTTCTTTTTTGTGAAT+GGG + Chr2:78394294-78394313 None:intergenic 20.0%
!!! TCAATTTTTGTTTTTGATCT+TGG + Chr2:78393269-78393288 None:intergenic 20.0%
!!! TTAAAAAGAGTGTATTAGTT+TGG - Chr2:78390446-78390465 MsG0280011016.01.T01:intron 20.0%
!!! TTATTTCTTCTCATATGATT+AGG - Chr2:78391624-78391643 MsG0280011016.01.T01:intron 20.0%
! AAAAAAGAAATTTCTCACGA+AGG - Chr2:78394300-78394319 MsG0280011016.01.T01:intron 25.0%
! AAACTTGAATGATTTCATCT+TGG + Chr2:78395222-78395241 None:intergenic 25.0%
! AAATGAATAGGATGCATAAT+AGG + Chr2:78388462-78388481 None:intergenic 25.0%
! AACATATTGGACAAATATGT+TGG - Chr2:78392331-78392350 MsG0280011016.01.T01:intron 25.0%
! AATAGTGTGTGTATTTATAG+AGG + Chr2:78388726-78388745 None:intergenic 25.0%
! ACAAAATAGGAAGAAAAAGA+TGG + Chr2:78394214-78394233 None:intergenic 25.0%
! ACAAATTAAATACTGCTAGA+GGG + Chr2:78395536-78395555 None:intergenic 25.0%
! ACTTAAATGTCAAATGTTTG+GGG + Chr2:78392553-78392572 None:intergenic 25.0%
! AGTCTGGTAACAATAAAAAT+TGG + Chr2:78390377-78390396 None:intergenic 25.0%
! ATAACAATAGAGAGAGAAAA+AGG + Chr2:78392138-78392157 None:intergenic 25.0%
! ATAGCTAAGAGAATTTCATT+GGG - Chr2:78388384-78388403 MsG0280011016.01.T01:CDS 25.0%
! ATAGTCGTTAGATCAAAATA+TGG - Chr2:78393672-78393691 MsG0280011016.01.T01:intron 25.0%
! ATATTAAGCATTACTCAAAG+TGG - Chr2:78389306-78389325 MsG0280011016.01.T01:CDS 25.0%
! ATGTCTAATGATGTTGAAAT+GGG - Chr2:78395269-78395288 MsG0280011016.01.T01:CDS 25.0%
! ATTAAGAAGACAAGATATAG+AGG + Chr2:78392882-78392901 None:intergenic 25.0%
! ATTAGTTACAATTCACATAG+GGG + Chr2:78393179-78393198 None:intergenic 25.0%
! ATTTCATCAAATGAGTTTGT+TGG + Chr2:78393572-78393591 None:intergenic 25.0%
! CAAAATAGGAAGAAAAAGAT+GGG + Chr2:78394213-78394232 None:intergenic 25.0%
! CAAACCACATTACAATAAAT+TGG - Chr2:78393924-78393943 MsG0280011016.01.T01:intron 25.0%
! CAATTAAACAAGATCAAAAG+TGG + Chr2:78390273-78390292 None:intergenic 25.0%
! CACTTAAATGTCAAATGTTT+GGG + Chr2:78392554-78392573 None:intergenic 25.0%
! CAGACTTACTATAATTCATT+TGG + Chr2:78391062-78391081 None:intergenic 25.0%
! CAGACTTACTTTAATTCATT+TGG - Chr2:78389347-78389366 MsG0280011016.01.T01:CDS 25.0%
! CAGACTTACTTTAATTCATT+TGG + Chr2:78389366-78389347 None:intergenic 25.0%
! CCAAAATCATTATGATGTAA+TGG + Chr2:78388828-78388847 None:intergenic 25.0%
! CCAAATGAATTAAAGTAAGT+CGG - Chr2:78389014-78389033 MsG0280011016.01.T01:CDS 25.0%
! CCTAAAAAGTTGTTGAAAAT+TGG - Chr2:78392189-78392208 MsG0280011016.01.T01:intron 25.0%
! CGTAAATCATTAGGATTAAT+TGG - Chr2:78392720-78392739 MsG0280011016.01.T01:intron 25.0%
! CGTATGGTAACAATAAAAAT+TGG - Chr2:78390005-78390024 MsG0280011016.01.T01:intron 25.0%
! GTGAAGTGTAACTAATAAAA+GGG - Chr2:78393098-78393117 MsG0280011016.01.T01:intron 25.0%
! TAATGAGCTTAGAAAATTTG+TGG - Chr2:78394950-78394969 MsG0280011016.01.T01:intron 25.0%
! TATGCTACAATTCAAAGTTT+AGG - Chr2:78388243-78388262 MsG0280011016.01.T01:CDS 25.0%
! TATTATGCATCCTATTCATT+TGG - Chr2:78388461-78388480 MsG0280011016.01.T01:CDS 25.0%
! TCAATTGCCAAATGAATTAA+AGG + Chr2:78389026-78389007 None:intergenic 25.0%
! TGTGAAGTGTAACTAATAAA+AGG - Chr2:78393097-78393116 MsG0280011016.01.T01:intron 25.0%
! TTAAGAAGACAAGATATAGA+GGG + Chr2:78392881-78392900 None:intergenic 25.0%
! TTATTGCATAGCTACAAATT+TGG - Chr2:78391539-78391558 MsG0280011016.01.T01:intron 25.0%
! TTATTGTATAGCAAAGAAAG+TGG - Chr2:78394426-78394445 MsG0280011016.01.T01:intron 25.0%
! TTGTCCAATATGTTGTTAAA+GGG + Chr2:78392325-78392344 None:intergenic 25.0%
! TTTGTCCAATATGTTGTTAA+AGG + Chr2:78392326-78392345 None:intergenic 25.0%
!! AAACTAATACCCTCATTTTA+AGG - Chr2:78389935-78389954 MsG0280011016.01.T01:intron 25.0%
!! AAACTAATACCCTCTTTTTA+AGG - Chr2:78389535-78389554 MsG0280011016.01.T01:CDS 25.0%
!! AGAATCATCGAAACTTTTAT+TGG - Chr2:78394750-78394769 MsG0280011016.01.T01:intron 25.0%
!! AGTGGATATGTTTTATAATG+TGG + Chr2:78391085-78391104 None:intergenic 25.0%
!! ATTTGAGCTTTTCAATTTTG+TGG + Chr2:78394352-78394371 None:intergenic 25.0%
!! ATTTTCTAAGCTCATTAACT+TGG + Chr2:78394947-78394966 None:intergenic 25.0%
!! CCAATTTTCAACAACTTTTT+AGG + Chr2:78392192-78392211 None:intergenic 25.0%
!! CCATTACATCATAATGATTT+TGG - Chr2:78388825-78388844 MsG0280011016.01.T01:CDS 25.0%
!! GAAAATAGAATTTTCTGCTT+TGG + Chr2:78392631-78392650 None:intergenic 25.0%
!! GAATCATCGAAACTTTTATT+GGG - Chr2:78394751-78394770 MsG0280011016.01.T01:intron 25.0%
!! GTTTAGCATTTTTAATGGTT+AGG + Chr2:78394083-78394102 None:intergenic 25.0%
!! TTTGCAATTTGGAGTTTATA+TGG - Chr2:78392763-78392782 MsG0280011016.01.T01:intron 25.0%
!! TTTTCTAAGCTCATTAACTT+GGG + Chr2:78394946-78394965 None:intergenic 25.0%
!!! AATTTTGTTTGTCCAAGTTA+GGG + Chr2:78389125-78389144 None:intergenic 25.0%
!!! AGAGTGTTTAGCATTTTTAA+TGG + Chr2:78394088-78394107 None:intergenic 25.0%
!!! ATCATAAATGATGCTACTTT+AGG - Chr2:78388189-78388208 MsG0280011016.01.T01:CDS 25.0%
!!! ATGTGTTATGTTTTTTGCAT+TGG + Chr2:78394145-78394164 None:intergenic 25.0%
!!! ATTAAAAGAGGGTATTAGTT+TGG - Chr2:78389230-78389249 MsG0280011016.01.T01:CDS 25.0%
!!! ATTTGTTTTCCTTTGTGAAT+AGG - Chr2:78393864-78393883 MsG0280011016.01.T01:intron 25.0%
!!! GACTCTAGAGTTTTTTTTTA+AGG + Chr2:78393349-78393368 None:intergenic 25.0%
!!! TATGTATTGGCTTATTCTAA+TGG - Chr2:78388423-78388442 MsG0280011016.01.T01:CDS 25.0%
!!! TTAAAAAGAGGGTATTAGTT+TGG - Chr2:78390864-78390883 MsG0280011016.01.T01:intron 25.0%
!!! TTAAAAAGAGGGTATTAGTT+TGG + Chr2:78390883-78390864 None:intergenic 25.0%
!!! TTAAAATGAGGGTATTAGTT+TGG + Chr2:78389936-78389955 None:intergenic 25.0%
!!! TTTTGTTTCATGTTTATTGC+AGG - Chr2:78393373-78393392 MsG0280011016.01.T01:intron 25.0%
AAAAGGAAGAGAGAGAATAA+AGG + Chr2:78392121-78392140 None:intergenic 30.0%
AAAATGCAGGGAATGTTATT+AGG + Chr2:78388146-78388165 None:intergenic 30.0%
AAACTTGTGAAAATGAACCA+TGG + Chr2:78394618-78394637 None:intergenic 30.0%
AAAGTGTGAATTAGGATTCT+CGG - Chr2:78393610-78393629 MsG0280011016.01.T01:intron 30.0%
AACATGACACGTAAATCATT+AGG - Chr2:78392711-78392730 MsG0280011016.01.T01:intron 30.0%
AAGTGAACTTCTACATGTTA+AGG - Chr2:78395157-78395176 MsG0280011016.01.T01:CDS 30.0%
AATCACATGATGCAACAAAA+TGG + Chr2:78390428-78390447 None:intergenic 30.0%
AATGACATGATGTGACAAAA+TGG + Chr2:78389213-78389232 None:intergenic 30.0%
AATGTACTAATCGTGTGAAT+GGG + Chr2:78393651-78393670 None:intergenic 30.0%
AATTTCTTCAAGACCTTTGA+TGG + Chr2:78395198-78395217 None:intergenic 30.0%
ACAAACAAAATTCTCTCTCT+CGG - Chr2:78391178-78391197 MsG0280011016.01.T01:intron 30.0%
AGAAAAAGATGGGTAATTCT+TGG + Chr2:78394203-78394222 None:intergenic 30.0%
AGAAACATAATTCAAGGGAA+TGG - Chr2:78392688-78392707 MsG0280011016.01.T01:intron 30.0%
AGAGGAATAATACAAGAAAC+AGG + Chr2:78388708-78388727 None:intergenic 30.0%
AGATACCAATCTAATAGGAA+TGG - Chr2:78393966-78393985 MsG0280011016.01.T01:intron 30.0%
AGTTTCGATGATTCTTTCTA+TGG + Chr2:78394745-78394764 None:intergenic 30.0%
ATTAGGCTTGTAATTGAAGT+AGG + Chr2:78388129-78388148 None:intergenic 30.0%
ATTATTTGCTCTTCCATCAA+AGG - Chr2:78395182-78395201 MsG0280011016.01.T01:CDS 30.0%
CAATCCCTTTAACAACATAT+TGG - Chr2:78392318-78392337 MsG0280011016.01.T01:intron 30.0%
CAATCTAATAGGAATGGAAT+TGG - Chr2:78393972-78393991 MsG0280011016.01.T01:intron 30.0%
CAATTCCATTCCTATTAGAT+TGG + Chr2:78393974-78393993 None:intergenic 30.0%
CACAAATTAAATACTGCTAG+AGG + Chr2:78395537-78395556 None:intergenic 30.0%
CACATCATGTCATTAAAAGA+GGG - Chr2:78389219-78389238 MsG0280011016.01.T01:CDS 30.0%
CAGACTTCCTTTAATTCATT+TGG - Chr2:78390148-78390167 MsG0280011016.01.T01:CDS 30.0%
CATATGTTCAAAACCACTTT+AGG - Chr2:78392789-78392808 MsG0280011016.01.T01:intron 30.0%
CATGTCTAATGATGTTGAAA+TGG - Chr2:78395268-78395287 MsG0280011016.01.T01:CDS 30.0%
CCAAACATTTGACATTTAAG+TGG - Chr2:78392552-78392571 MsG0280011016.01.T01:intron 30.0%
CCAATCTGAATTTGATATAG+TGG - Chr2:78392854-78392873 MsG0280011016.01.T01:intron 30.0%
CCACTATATCAAATTCAGAT+TGG + Chr2:78392857-78392876 None:intergenic 30.0%
CCACTTAAATGTCAAATGTT+TGG + Chr2:78392555-78392574 None:intergenic 30.0%
CCGACTTACTTTAATTCATT+TGG + Chr2:78389819-78389838 None:intergenic 30.0%
CGTCTGGTAACAATAAAAAT+TGG - Chr2:78389605-78389624 MsG0280011016.01.T01:CDS 30.0%
CGTCTGGTAACAATAAAAAT+TGG + Chr2:78389624-78389605 None:intergenic 30.0%
GAATCCTAATTCACACTTTA+TGG + Chr2:78393609-78393628 None:intergenic 30.0%
GAGATTGAAGATTCTTGTAA+AGG - Chr2:78393436-78393455 MsG0280011016.01.T01:intron 30.0%
GATAGCTAAGAGAATTTCAT+TGG - Chr2:78388383-78388402 MsG0280011016.01.T01:CDS 30.0%
GCATCATGTGATTAAAAAGA+GGG - Chr2:78390435-78390454 MsG0280011016.01.T01:intron 30.0%
TAATGGAACAAGATCAAAAG+TGG + Chr2:78391103-78391122 None:intergenic 30.0%
TAGCTTCTCAATAGATATGT+GGG + Chr2:78393012-78393031 None:intergenic 30.0%
TCAAACTACTCTATCACAAT+GGG - Chr2:78389977-78389996 MsG0280011016.01.T01:intron 30.0%
TCACATCATGTCATTAAAAG+AGG - Chr2:78389218-78389237 MsG0280011016.01.T01:CDS 30.0%
TCCAAATTGCAAACTATTGA+AGG + Chr2:78392756-78392775 None:intergenic 30.0%
TCCAACTATTCTATCACAAT+GGG + Chr2:78390405-78390424 None:intergenic 30.0%
TCTAAGTAAAGAATCATCCA+AGG - Chr2:78392378-78392397 MsG0280011016.01.T01:intron 30.0%
TCTCATTGTGATAGAATAGA+TGG - Chr2:78389186-78389205 MsG0280011016.01.T01:CDS 30.0%
TCTCCCAATTTATTGTAATG+TGG + Chr2:78393931-78393950 None:intergenic 30.0%
TCTTGTAAAGGTAATTAGTG+AGG - Chr2:78393448-78393467 MsG0280011016.01.T01:intron 30.0%
TGCATCATGTGATTAAAAAG+AGG - Chr2:78390434-78390453 MsG0280011016.01.T01:intron 30.0%
TTAATACACGGGTAAGATAA+AGG + Chr2:78393840-78393859 None:intergenic 30.0%
TTAGCTTCTCAATAGATATG+TGG + Chr2:78393013-78393032 None:intergenic 30.0%
TTATAGCAACCACTATGAAA+TGG + Chr2:78395011-78395030 None:intergenic 30.0%
TTCATAGTGGTTGCTATAAT+AGG - Chr2:78395012-78395031 MsG0280011016.01.T01:intron 30.0%
TTGAAAATAGTCCTAACACT+TGG + Chr2:78393040-78393059 None:intergenic 30.0%
TTGTTATCGTCCAATAAGAA+TGG - Chr2:78392151-78392170 MsG0280011016.01.T01:intron 30.0%
TTTGGACTCTATTTCAACTT+TGG - Chr2:78391557-78391576 MsG0280011016.01.T01:intron 30.0%
! AAGTGACAATTTTGTGAATG+AGG - Chr2:78395118-78395137 MsG0280011016.01.T01:CDS 30.0%
! AGCAAAACTGATTCACAATT+GGG - Chr2:78394897-78394916 MsG0280011016.01.T01:intron 30.0%
! ATAAAGTACTCTTTCGCATT+GGG - Chr2:78394384-78394403 MsG0280011016.01.T01:intron 30.0%
! CAAATGCACTGAATTTTGTT+CGG - Chr2:78391904-78391923 MsG0280011016.01.T01:intron 30.0%
! GTGACAATTAGTTGCTTTAA+CGG + Chr2:78388686-78388705 None:intergenic 30.0%
! GTTCCTTTAGAGAAATGATT+TGG + Chr2:78388300-78388319 None:intergenic 30.0%
! TAGCAAAACTGATTCACAAT+TGG - Chr2:78394896-78394915 MsG0280011016.01.T01:intron 30.0%
! TCATAGAGACTTTTCTTCAA+AGG - Chr2:78395351-78395370 MsG0280011016.01.T01:CDS 30.0%
! TCCTTCAATAGTTTGCAATT+TGG - Chr2:78392752-78392771 MsG0280011016.01.T01:intron 30.0%
! TGGTTTTTACCATTTCATAG+TGG - Chr2:78394999-78395018 MsG0280011016.01.T01:intron 30.0%
! TTTTCGGCCCAATATTAAAA+CGG + Chr2:78394697-78394716 None:intergenic 30.0%
! TTTTTGTGGATCTTCTTTTC+TGG - Chr2:78394787-78394806 MsG0280011016.01.T01:intron 30.0%
!! AATTTTGTTTGTCCAAGTCA+GGG + Chr2:78389661-78389642 None:intergenic 30.0%
!! ATCAAATGTGTTGATTGAGA+AGG + Chr2:78388366-78388385 None:intergenic 30.0%
!! GAATTTTGTTTGTCCAAGTT+AGG + Chr2:78389126-78389145 None:intergenic 30.0%
!! GCGAAATTTTATTTCACGAT+AGG - Chr2:78389881-78389900 MsG0280011016.01.T01:intron 30.0%
!! GCGAAATTTTATTTCACGAT+AGG + Chr2:78389900-78389881 None:intergenic 30.0%
!! TTAGAGAAGCTTTTTAGTAC+TGG + Chr2:78392363-78392382 None:intergenic 30.0%
!! TTAGTGGATGTTTTGCATTT+TGG - Chr2:78395056-78395075 MsG0280011016.01.T01:intron 30.0%
!!! ATGATTTTGGCTGTTTTAAG+TGG - Chr2:78388838-78388857 MsG0280011016.01.T01:CDS 30.0%
!!! ATGTTTTTTGCATTGGATTC+AGG + Chr2:78394138-78394157 None:intergenic 30.0%
!!! CGAAATTTTAATTTCACGGT+AGG - Chr2:78389481-78389500 MsG0280011016.01.T01:CDS 30.0%
!!! GCTTTCATGTTCTATTTTTG+TGG - Chr2:78394773-78394792 MsG0280011016.01.T01:intron 30.0%
!!! TTTTGAGTTTGAGTGTTGTT+GGG - Chr2:78395435-78395454 MsG0280011016.01.T01:CDS 30.0%
AAACTCACCATAAGGTTTAG+TGG + Chr2:78388012-78388031 None:intergenic 35.0%
AAATGTTAAAGCCCAAGGAA+CGG - Chr2:78394515-78394534 MsG0280011016.01.T01:intron 35.0%
AACAAGTGTGGACAAACATT+GGG + Chr2:78394850-78394869 None:intergenic 35.0%
AAGGACATGAAGCAACAAAA+TGG - Chr2:78389954-78389973 MsG0280011016.01.T01:intron 35.0%
AAGGACATGATGCAACAAAA+TGG - Chr2:78389554-78389573 MsG0280011016.01.T01:CDS 35.0%
AAGTAAAGAATCATCCAAGG+TGG - Chr2:78392381-78392400 MsG0280011016.01.T01:intron 35.0%
AAGTGGATCAATAGTGCTAT+AGG + Chr2:78390256-78390275 None:intergenic 35.0%
AATGCTAAACACTCTTTCCT+TGG - Chr2:78394093-78394112 MsG0280011016.01.T01:intron 35.0%
ACATTGGGAGAGTTCATATT+TGG + Chr2:78394835-78394854 None:intergenic 35.0%
ACCTCCATAAAGTGTGAATT+AGG - Chr2:78393602-78393621 MsG0280011016.01.T01:intron 35.0%
AGAGATTGAAAAGGCAATGA+GGG - Chr2:78395490-78395509 MsG0280011016.01.T01:CDS 35.0%
AGGCTCATTATCAAAGTTAG+TGG - Chr2:78395040-78395059 MsG0280011016.01.T01:intron 35.0%
AGTGCACTTAAAGTTGTATG+AGG + Chr2:78392261-78392280 None:intergenic 35.0%
AGTTGTTGGAATGGTATGAA+GGG + Chr2:78394178-78394197 None:intergenic 35.0%
ATAGCAAAGAAAGTGGTTTC+TGG - Chr2:78394433-78394452 MsG0280011016.01.T01:intron 35.0%
ATATTGGGCCGAAAAAACAT+AGG - Chr2:78394702-78394721 MsG0280011016.01.T01:intron 35.0%
ATCACAATGAGATAAACGTC+TGG + Chr2:78389178-78389197 None:intergenic 35.0%
ATCACAATGGGATAAAAGTC+TGG + Chr2:78390393-78390412 None:intergenic 35.0%
ATCACAATGGGATAAACGTA+TGG - Chr2:78389989-78390008 MsG0280011016.01.T01:intron 35.0%
CAATGGAACAAGATCAAAAG+TGG - Chr2:78389709-78389728 MsG0280011016.01.T01:CDS 35.0%
CAATGGAACAAGATCAAAAG+TGG + Chr2:78389728-78389709 None:intergenic 35.0%
CAATGGAACAAGATCAAATG+TGG - Chr2:78390107-78390126 MsG0280011016.01.T01:CDS 35.0%
CAATGTACTAATCGTGTGAA+TGG + Chr2:78393652-78393671 None:intergenic 35.0%
CCAATAAGAATGGAGGAAAA+AGG - Chr2:78392161-78392180 MsG0280011016.01.T01:intron 35.0%
GAAATTCATACATCCGATCA+CGG - Chr2:78393727-78393746 MsG0280011016.01.T01:intron 35.0%
GAGAAGTTGTATAGTGATGA+AGG - Chr2:78395386-78395405 MsG0280011016.01.T01:CDS 35.0%
GAGGTAGATACCAATCTAAT+AGG - Chr2:78393961-78393980 MsG0280011016.01.T01:intron 35.0%
GCATCATGTCCTTAAAAAGA+GGG + Chr2:78389547-78389566 None:intergenic 35.0%
GCGAAATTTCATTTCACGAT+AGG + Chr2:78389285-78389304 None:intergenic 35.0%
GCTTAGAAAATTTGTGGTAG+AGG - Chr2:78394956-78394975 MsG0280011016.01.T01:intron 35.0%
GCTTCATGTCCTTAAAATGA+GGG + Chr2:78389947-78389966 None:intergenic 35.0%
GGTCCAAATCATTTCTCTAA+AGG - Chr2:78388294-78388313 MsG0280011016.01.T01:CDS 35.0%
GTCAAACTACTCTATCACAA+TGG - Chr2:78389976-78389995 MsG0280011016.01.T01:intron 35.0%
GTCCAACTATTCTATCACAA+TGG + Chr2:78390406-78390425 None:intergenic 35.0%
GTGTGTTTAGACCATGTTTA+AGG + Chr2:78394044-78394063 None:intergenic 35.0%
TAGAGATTGAAAAGGCAATG+AGG - Chr2:78395489-78395508 MsG0280011016.01.T01:CDS 35.0%
TAGGTGGAGAAAAAAGCTAT+GGG + Chr2:78390735-78390754 None:intergenic 35.0%
TCCAACTACTCTATCACAAT+GGG - Chr2:78389577-78389596 MsG0280011016.01.T01:CDS 35.0%
TCCAGCTATGTTGAGTTTAT+GGG - Chr2:78388266-78388285 MsG0280011016.01.T01:CDS 35.0%
TCCCATTGTGATAGAATAGT+TGG - Chr2:78390401-78390420 MsG0280011016.01.T01:intron 35.0%
TCCTAATTCACACTTTATGG+AGG + Chr2:78393606-78393625 None:intergenic 35.0%
TCTACCTGAAACATAGCTTA+CGG + Chr2:78394475-78394494 None:intergenic 35.0%
TCTTGGTCAAGAATGTTGAT+TGG + Chr2:78394021-78394040 None:intergenic 35.0%
TGATTTCATGTGAAGGAGTT+TGG + Chr2:78394238-78394257 None:intergenic 35.0%
TGCATCATGTCCTTAAAAAG+AGG + Chr2:78389548-78389567 None:intergenic 35.0%
TGCTAGTGTTAGTTAACTAG+TGG - Chr2:78392916-78392935 MsG0280011016.01.T01:intron 35.0%
TGCTTCATGTCCTTAAAATG+AGG + Chr2:78389948-78389967 None:intergenic 35.0%
TGGGACAATAGAGATTGAAA+AGG - Chr2:78395481-78395500 MsG0280011016.01.T01:CDS 35.0%
TGTAAAGGTAATTAGTGAGG+AGG - Chr2:78393451-78393470 MsG0280011016.01.T01:intron 35.0%
TGTTGAAGAAACTCACCATA+AGG + Chr2:78388020-78388039 None:intergenic 35.0%
TTATCGTCCAATAAGAATGG+AGG - Chr2:78392154-78392173 MsG0280011016.01.T01:intron 35.0%
! AATGAGGGAACTTGTTCAAT+GGG - Chr2:78395505-78395524 MsG0280011016.01.T01:CDS 35.0%
! ATGTTGAGTTTATGGGCTAT+AGG - Chr2:78388273-78388292 MsG0280011016.01.T01:CDS 35.0%
! CAGAAGCTGAACCTAATTTT+TGG - Chr2:78394979-78394998 MsG0280011016.01.T01:intron 35.0%
! CCTTTTTCCTCCATTCTTAT+TGG + Chr2:78392164-78392183 None:intergenic 35.0%
! CTTGGTCAAGAATGTTGATT+GGG + Chr2:78394020-78394039 None:intergenic 35.0%
! GATAAAGTACTCTTTCGCAT+TGG - Chr2:78394383-78394402 MsG0280011016.01.T01:intron 35.0%
! GATTGTGTTGGTGTATGTAT+TGG - Chr2:78388410-78388429 MsG0280011016.01.T01:CDS 35.0%
! GGTTGCTATAATAGGCTTTT+AGG - Chr2:78395020-78395039 MsG0280011016.01.T01:intron 35.0%
! GTTGATTGGGAATGATTTGT+AGG + Chr2:78394007-78394026 None:intergenic 35.0%
! GTTTTCCTTTGTGAATAGGA+TGG - Chr2:78393868-78393887 MsG0280011016.01.T01:intron 35.0%
! TCAACGCATTGACAATTGTT+CGG + Chr2:78393753-78393772 None:intergenic 35.0%
! TCCAATTGATTCAACAAGTG+TGG + Chr2:78394862-78394881 None:intergenic 35.0%
! TCCACACTTGTTGAATCAAT+TGG - Chr2:78394858-78394877 MsG0280011016.01.T01:intron 35.0%
! TTAGACCATGTTTAAGGTCT+TGG + Chr2:78394038-78394057 None:intergenic 35.0%
!! AAACAAAGCACTGAGTTGTA+CGG - Chr2:78392823-78392842 MsG0280011016.01.T01:intron 35.0%
!! AGAAGCTTTTTAGTACTGGA+TGG + Chr2:78392359-78392378 None:intergenic 35.0%
!! ATGAGTTTGTTGGACTTACT+AGG + Chr2:78393562-78393581 None:intergenic 35.0%
!! ATTGGGGCCGTTTTAATATT+GGG - Chr2:78394687-78394706 MsG0280011016.01.T01:intron 35.0%
!! GAATTTTGTTTGTCCAAGTC+AGG + Chr2:78389660-78389641 None:intergenic 35.0%
!! GTGAATCAGTTTTGCTATCT+AGG + Chr2:78394893-78394912 None:intergenic 35.0%
!!! GTTTTGAGTTTGAGTGTTGT+TGG - Chr2:78395434-78395453 MsG0280011016.01.T01:CDS 35.0%
!!! TTCTTTTTTGTGAATGGGCT+GGG + Chr2:78394289-78394308 None:intergenic 35.0%
!!! TTTCTTTTTTGTGAATGGGC+TGG + Chr2:78394290-78394309 None:intergenic 35.0%
AAAAGACGCGAGAGTAACAA+AGG + Chr2:78388777-78388796 None:intergenic 40.0%
AAGCTAAGCTACCAAGTGTT+AGG - Chr2:78393026-78393045 MsG0280011016.01.T01:intron 40.0%
AATCTCTCGTGCTAAGTCTT+TGG - Chr2:78393496-78393515 MsG0280011016.01.T01:intron 40.0%
ACAACCACGTATGAAAATGC+AGG + Chr2:78388159-78388178 None:intergenic 40.0%
ACATGGTCTAAACACACTTG+AGG - Chr2:78394047-78394066 MsG0280011016.01.T01:intron 40.0%
ACGAAGGTAACGACGATAAA+TGG - Chr2:78394316-78394335 MsG0280011016.01.T01:intron 40.0%
ACTTTAGGTGACTCTTTACG+TGG - Chr2:78388204-78388223 MsG0280011016.01.T01:CDS 40.0%
AGCATTGCTATATGTCGCAA+CGG - Chr2:78388919-78388938 MsG0280011016.01.T01:CDS 40.0%
AGTAGGTGGAGAAAAGCTTT+GGG - Chr2:78390063-78390082 MsG0280011016.01.T01:CDS 40.0%
AGTGGATATGTCTCATAGTG+TGG - Chr2:78389324-78389343 MsG0280011016.01.T01:CDS 40.0%
AGTGGATATGTCTCATAGTG+TGG + Chr2:78389343-78389324 None:intergenic 40.0%
ATAAGCCCATGAAGACTGAT+AGG + Chr2:78394410-78394429 None:intergenic 40.0%
ATCACAATGGGATAAACGTC+TGG - Chr2:78389589-78389608 MsG0280011016.01.T01:CDS 40.0%
ATCACAATGGGATAAACGTC+TGG + Chr2:78389608-78389589 None:intergenic 40.0%
ATTGGGAGAGAAACTTCAAG+AGG - Chr2:78393942-78393961 MsG0280011016.01.T01:intron 40.0%
CAACAAGTGTGGACAAACAT+TGG + Chr2:78394851-78394870 None:intergenic 40.0%
CAACCACGTATGAAAATGCA+GGG + Chr2:78388158-78388177 None:intergenic 40.0%
CACATGAAATCATCAACCGA+GGG - Chr2:78394246-78394265 MsG0280011016.01.T01:intron 40.0%
CGAAGGTAACGACGATAAAT+GGG - Chr2:78394317-78394336 MsG0280011016.01.T01:intron 40.0%
CTTGACCAAGACCTTAAACA+TGG - Chr2:78394030-78394049 MsG0280011016.01.T01:intron 40.0%
GAAAAGCTCAAATCTTCTCC+CGG - Chr2:78394359-78394378 MsG0280011016.01.T01:intron 40.0%
GAAGGAGTTTGGCACAAAAT+AGG + Chr2:78394227-78394246 None:intergenic 40.0%
GAGATCACCACTAAACCTTA+TGG - Chr2:78388002-78388021 MsG0280011016.01.T01:three_prime_UTR 40.0%
GAGGAAAATACTTCTGCACT+TGG - Chr2:78393470-78393489 MsG0280011016.01.T01:intron 40.0%
GAGTTGTTGGAATGGTATGA+AGG + Chr2:78394179-78394198 None:intergenic 40.0%
GATTCTTGTCACTACTTCCA+TGG - Chr2:78394598-78394617 MsG0280011016.01.T01:intron 40.0%
GGACTCTATTTCAACTTTGG+CGG - Chr2:78391560-78391579 MsG0280011016.01.T01:intron 40.0%
GGAGAAAAAAGCTATGGGAT+AGG + Chr2:78390730-78390749 None:intergenic 40.0%
GGTAATTCTTGGTGAGTTGT+TGG + Chr2:78394192-78394211 None:intergenic 40.0%
GTACTAGCTGCCAAATGAAT+AGG + Chr2:78388474-78388493 None:intergenic 40.0%
GTAGGTGGAGAAAAAAGCTA+TGG + Chr2:78390736-78390755 None:intergenic 40.0%
GTATAGTGATGAAGGTGAGA+AGG - Chr2:78395394-78395413 MsG0280011016.01.T01:CDS 40.0%
GTCCAACTACTCTATCACAA+TGG - Chr2:78389576-78389595 MsG0280011016.01.T01:CDS 40.0%
GTCCAGCTATGTTGAGTTTA+TGG - Chr2:78388265-78388284 MsG0280011016.01.T01:CDS 40.0%
GTGCTATATATATGTCGCGA+CGG - Chr2:78390550-78390569 MsG0280011016.01.T01:intron 40.0%
GTGTACTTGACAAGGAAAAG+AGG + Chr2:78392609-78392628 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + Chr2:78393134-78393153 None:intergenic 40.0%
TCACATGAAATCATCAACCG+AGG - Chr2:78394245-78394264 MsG0280011016.01.T01:intron 40.0%
TCATGCCATCCTATTCACAA+AGG + Chr2:78393876-78393895 None:intergenic 40.0%
TCCCATTGTGATAGAGTAGT+TGG + Chr2:78389581-78389600 None:intergenic 40.0%
TCTTCAACATTCCACCATTG+TGG - Chr2:78388031-78388050 MsG0280011016.01.T01:three_prime_UTR 40.0%
TGAAATGGGAAAGTCAAGAG+AGG - Chr2:78395283-78395302 MsG0280011016.01.T01:CDS 40.0%
TGAATAGGATGGCATGAAGT+GGG - Chr2:78393879-78393898 MsG0280011016.01.T01:intron 40.0%
TGTGGATATGTCTCATAGTG+TGG - Chr2:78390125-78390144 MsG0280011016.01.T01:CDS 40.0%
TTCAACGAAGCCGTATGTAT+GGG - Chr2:78394640-78394659 MsG0280011016.01.T01:intron 40.0%
TTCATTGGGTCAGATTGTGT+TGG - Chr2:78388398-78388417 MsG0280011016.01.T01:CDS 40.0%
TTCTTGGTGAGTTGTTGGAA+TGG + Chr2:78394187-78394206 None:intergenic 40.0%
TTGTTTGTCCAAGTCAGAGT+AGG - Chr2:78390046-78390065 MsG0280011016.01.T01:intron 40.0%
TTGTTTGTCCAAGTCAGTGT+AGG - Chr2:78389646-78389665 MsG0280011016.01.T01:CDS 40.0%
TTGTTTGTCCAAGTTAGGGT+AGG + Chr2:78389121-78389140 None:intergenic 40.0%
TTTAGGTGTACTTGCTTGTG+TGG - Chr2:78388497-78388516 MsG0280011016.01.T01:CDS 40.0%
! ATTCCCTGCATTTTCATACG+TGG - Chr2:78388152-78388171 MsG0280011016.01.T01:CDS 40.0%
! CAATGAGGGAACTTGTTCAA+TGG - Chr2:78395504-78395523 MsG0280011016.01.T01:CDS 40.0%
! GTGGAGAAAAGCTTTGTGAT+AGG - Chr2:78389668-78389687 MsG0280011016.01.T01:CDS 40.0%
! TAGTGGTGATCTCTCCATTT+TGG + Chr2:78387995-78388014 None:intergenic 40.0%
! TCATCATCATTTTGTCCCCA+CGG - Chr2:78392948-78392967 MsG0280011016.01.T01:intron 40.0%
! TCCTTGGGCTTTAACATTTG+CGG + Chr2:78394514-78394533 None:intergenic 40.0%
!! AAAGAAAGTGGTTTCTGGTC+TGG - Chr2:78394438-78394457 MsG0280011016.01.T01:intron 40.0%
!! AAGAAAGTGGTTTCTGGTCT+GGG - Chr2:78394439-78394458 MsG0280011016.01.T01:intron 40.0%
!! ACGACGATAAATGGGCTAAT+TGG - Chr2:78394325-78394344 MsG0280011016.01.T01:intron 40.0%
!! ATCATCCAAGGTGGATTTTG+TGG - Chr2:78392390-78392409 MsG0280011016.01.T01:intron 40.0%
!! ATCTTCTTTTCTGGCCCAAA+AGG - Chr2:78394796-78394815 MsG0280011016.01.T01:intron 40.0%
!! CGACGATAAATGGGCTAATT+GGG - Chr2:78394326-78394345 MsG0280011016.01.T01:intron 40.0%
!! CGGTTGATGATTTCATGTGA+AGG + Chr2:78394245-78394264 None:intergenic 40.0%
!! GATTGGGGCCGTTTTAATAT+TGG - Chr2:78394686-78394705 MsG0280011016.01.T01:intron 40.0%
!! GTGGAGAAAAGCTTTAGGAT+AGG + Chr2:78389099-78389118 None:intergenic 40.0%
!! GTGGAGAAAAGCTTTGAGAT+AGG + Chr2:78390314-78390333 None:intergenic 40.0%
!! TCTTCTTTTCTGGCCCAAAA+GGG - Chr2:78394797-78394816 MsG0280011016.01.T01:intron 40.0%
!!! TTGGTGGGCCTATGTTTTTT+CGG + Chr2:78394713-78394732 None:intergenic 40.0%
AAACACTCTTTCCTTGGTGG+TGG - Chr2:78394099-78394118 MsG0280011016.01.T01:intron 45.0%
AACAGTGCTATATGTCGCGA+CGG + Chr2:78389435-78389454 None:intergenic 45.0%
ACGGTGATTGGAACTGTGTA+CGG - Chr2:78394534-78394553 MsG0280011016.01.T01:intron 45.0%
ACTTACTAGGTAGCGCATGA+TGG + Chr2:78393549-78393568 None:intergenic 45.0%
AGATATGTGGGATATCTCCG+TGG + Chr2:78392968-78392987 None:intergenic 45.0%
AGCTACTATGGTGCAAGCTA+AGG + Chr2:78388088-78388107 None:intergenic 45.0%
AGCTTCTATTGCTGTGGCTT+TGG - Chr2:78388320-78388339 MsG0280011016.01.T01:CDS 45.0%
AGGAACAGCTTCTATTGCTG+TGG - Chr2:78388314-78388333 MsG0280011016.01.T01:CDS 45.0%
AGTTCCAATCACCGTTCCTT+GGG + Chr2:78394529-78394548 None:intergenic 45.0%
ATATGTGGGATATCTCCGTG+GGG + Chr2:78392966-78392985 None:intergenic 45.0%
ATCGTGTGAATGGGTGCAAT+TGG + Chr2:78393642-78393661 None:intergenic 45.0%
ATGCGTTGAATGCGTGCAAT+TGG - Chr2:78393764-78393783 MsG0280011016.01.T01:intron 45.0%
ATTGGGCCTATCAGTCTTCA+TGG - Chr2:78394401-78394420 MsG0280011016.01.T01:intron 45.0%
CAACTTTACCAGTTGCGTCA+AGG - Chr2:78393150-78393169 MsG0280011016.01.T01:intron 45.0%
CATACATACGGCTTCGTTGA+AGG + Chr2:78394641-78394660 None:intergenic 45.0%
CTTCAACGAAGCCGTATGTA+TGG - Chr2:78394639-78394658 MsG0280011016.01.T01:intron 45.0%
GAGTAGGTGGAGAAAAGCTT+TGG - Chr2:78390062-78390081 MsG0280011016.01.T01:CDS 45.0%
GATATGTGGGATATCTCCGT+GGG + Chr2:78392967-78392986 None:intergenic 45.0%
GCCCATAAACTCAACATAGC+TGG + Chr2:78388270-78388289 None:intergenic 45.0%
GCTAAACACTCTTTCCTTGG+TGG - Chr2:78394096-78394115 MsG0280011016.01.T01:intron 45.0%
GGTAGGTGGAGAAAAGCTTT+AGG + Chr2:78389104-78389123 None:intergenic 45.0%
GGTAGGTGGGTAAAAGCTTT+GGG + Chr2:78391149-78391168 None:intergenic 45.0%
GTAGCTGGTGCAACACTTTA+TGG - Chr2:78388102-78388121 MsG0280011016.01.T01:CDS 45.0%
GTGAATAGGATGGCATGAAG+TGG - Chr2:78393878-78393897 MsG0280011016.01.T01:intron 45.0%
GTGACTCTTTACGTGGTTGT+TGG - Chr2:78388211-78388230 MsG0280011016.01.T01:CDS 45.0%
GTTTGAGTGTGTGCATGCAT+GGG - Chr2:78395462-78395481 MsG0280011016.01.T01:CDS 45.0%
TACTATGGTGCAAGCTAAGG+CGG + Chr2:78388085-78388104 None:intergenic 45.0%
TAGCAAGCAAAACGAGGGTA+AGG + Chr2:78388537-78388556 None:intergenic 45.0%
TAGTGATGAAGGTGAGAAGG+AGG - Chr2:78395397-78395416 MsG0280011016.01.T01:CDS 45.0%
TCATGTGACTGAAAGGTCAC+TGG + Chr2:78393127-78393146 None:intergenic 45.0%
TGAAACATAGCTTACGGCCA+CGG + Chr2:78394469-78394488 None:intergenic 45.0%
TGTTTGAGTGTGTGCATGCA+TGG - Chr2:78395461-78395480 MsG0280011016.01.T01:CDS 45.0%
TTCCATTATGCCAACACACG+TGG - Chr2:78391115-78391134 MsG0280011016.01.T01:intron 45.0%
TTGGCAGCTAGTACTGCTTT+AGG - Chr2:78388480-78388499 MsG0280011016.01.T01:CDS 45.0%
TTGGGCCTATCAGTCTTCAT+GGG - Chr2:78394402-78394421 MsG0280011016.01.T01:intron 45.0%
TTGTCCAAGTTAGGGTAGGT+GGG + Chr2:78389117-78389136 None:intergenic 45.0%
TTGTTTGTCCAAGTCAGGGT+AGG + Chr2:78390336-78390355 None:intergenic 45.0%
TTTAATTGTGCCAGCACACG+TGG - Chr2:78390285-78390304 MsG0280011016.01.T01:intron 45.0%
TTTACCCACCTACCCTAACT+TGG - Chr2:78391155-78391174 MsG0280011016.01.T01:intron 45.0%
TTTCTCCACCTACCCTAACT+TGG - Chr2:78389110-78389129 MsG0280011016.01.T01:CDS 45.0%
TTTCTCCACCTACTCTGACT+TGG + Chr2:78390057-78390076 None:intergenic 45.0%
TTTGTCCAAGTCAGAGTAGG+TGG - Chr2:78390049-78390068 MsG0280011016.01.T01:intron 45.0%
TTTGTCCAAGTCAGTGTAGG+TGG - Chr2:78389649-78389668 MsG0280011016.01.T01:CDS 45.0%
TTTGTCCAAGTTAGGGTAGG+TGG + Chr2:78389118-78389137 None:intergenic 45.0%
! AACCACGTGTGTTGGCATAA+TGG + Chr2:78391120-78391139 None:intergenic 45.0%
! AAGTGTTGCACCAGCTACTA+TGG + Chr2:78388100-78388119 None:intergenic 45.0%
! CTGCTTTGGTGTACTTGACA+AGG + Chr2:78392617-78392636 None:intergenic 45.0%
! CTTTACGTGGTTGTTGGCTA+GGG - Chr2:78388217-78388236 MsG0280011016.01.T01:CDS 45.0%
! GCACATGTTGAAGCCCTTTT+GGG + Chr2:78394813-78394832 None:intergenic 45.0%
! TCTTTACGTGGTTGTTGGCT+AGG - Chr2:78388216-78388235 MsG0280011016.01.T01:CDS 45.0%
! TTTCTCCACCTACACTGACT+TGG + Chr2:78389657-78389676 None:intergenic 45.0%
!! ATCCAAGGTGGATTTTGTGG+CGG - Chr2:78392393-78392412 MsG0280011016.01.T01:intron 45.0%
!! CGAAAGAGTACTTTATCGCC+GGG + Chr2:78394380-78394399 None:intergenic 45.0%
!! GCGAAAGAGTACTTTATCGC+CGG + Chr2:78394381-78394400 None:intergenic 45.0%
!! TTAGCTTGCACCATAGTAGC+TGG - Chr2:78388087-78388106 MsG0280011016.01.T01:CDS 45.0%
!!! AGGTAGAGAAGCCACTTTTC+GGG - Chr2:78394488-78394507 MsG0280011016.01.T01:intron 45.0%
!!! CAGGTAGAGAAGCCACTTTT+CGG - Chr2:78394487-78394506 MsG0280011016.01.T01:intron 45.0%
!!! AATTTTTTTAAAAATATACT+AGG - Chr2:78391465-78391484 MsG0280011016.01.T01:intron 5.0%
AAAGCCCAAGGAACGGTGAT+TGG - Chr2:78394522-78394541 MsG0280011016.01.T01:intron 50.0%
AACATTTGCGGCCCGAAAAG+TGG + Chr2:78394502-78394521 None:intergenic 50.0%
ACCTGGTAGCAAGCAAAACG+AGG + Chr2:78388543-78388562 None:intergenic 50.0%
AGACACTCTCTCCACAATGG+TGG + Chr2:78388045-78388064 None:intergenic 50.0%
AGAGGATGACACGTGGCTTT+CGG - Chr2:78395301-78395320 MsG0280011016.01.T01:CDS 50.0%
AGATAGGTAACCACGTGTGC+TGG + Chr2:78390298-78390317 None:intergenic 50.0%
AGTCAAGAGAGGATGACACG+TGG - Chr2:78395294-78395313 MsG0280011016.01.T01:CDS 50.0%
CAGTAAGTGAACCACCACCA+AGG + Chr2:78394113-78394132 None:intergenic 50.0%
CAGTTCCAATCACCGTTCCT+TGG + Chr2:78394530-78394549 None:intergenic 50.0%
CCTGGTAGCAAGCAAAACGA+GGG + Chr2:78388542-78388561 None:intergenic 50.0%
CTTTCTATGGCGAACTCGCT+TGG + Chr2:78394732-78394751 None:intergenic 50.0%
GAAACATAGCTTACGGCCAC+GGG + Chr2:78394468-78394487 None:intergenic 50.0%
GACAATTGTTCGGCCGTGAT+CGG + Chr2:78393743-78393762 None:intergenic 50.0%
GAGAGACACTCTCTCCACAA+TGG + Chr2:78388048-78388067 None:intergenic 50.0%
GCCGCAAATGTTAAAGCCCA+AGG - Chr2:78394510-78394529 MsG0280011016.01.T01:intron 50.0%
GCTGGGCTTGGACATTTGTT+GGG + Chr2:78394272-78394291 None:intergenic 50.0%
GGAACTGTGTACGGTGTGTT+GGG - Chr2:78394543-78394562 MsG0280011016.01.T01:intron 50.0%
GGATAGACAACCACGTGTGT+TGG + Chr2:78391128-78391147 None:intergenic 50.0%
GGGTAGGTGGGTAAAAGCTT+TGG + Chr2:78391150-78391169 None:intergenic 50.0%
GTGGCATTTCGGCTGTGATT+GGG - Chr2:78394670-78394689 MsG0280011016.01.T01:intron 50.0%
GTGGCCGTAAGCTATGTTTC+AGG - Chr2:78394468-78394487 MsG0280011016.01.T01:intron 50.0%
TGGAACTGTGTACGGTGTGT+TGG - Chr2:78394542-78394561 MsG0280011016.01.T01:intron 50.0%
TGGCATTTCGGCTGTGATTG+GGG - Chr2:78394671-78394690 MsG0280011016.01.T01:intron 50.0%
TTCCGCCACAAAATCCACCT+TGG + Chr2:78392398-78392417 None:intergenic 50.0%
TTTCTCCACCTACCCTGACT+TGG - Chr2:78390325-78390344 MsG0280011016.01.T01:intron 50.0%
TTTGTCCAAGTCAGGGTAGG+TGG + Chr2:78390333-78390352 None:intergenic 50.0%
! AAGAGGAAGCACACGAGTGA+TGG + Chr2:78392592-78392611 None:intergenic 50.0%
! CATGATGGTGACAAGGAGCT+TGG + Chr2:78393534-78393553 None:intergenic 50.0%
! GGCACATGTTGAAGCCCTTT+TGG + Chr2:78394814-78394833 None:intergenic 50.0%
! GGCTTTGGCTGCATTTGTTG+TGG - Chr2:78388335-78388354 MsG0280011016.01.T01:CDS 50.0%
! TTGGACATTTGTTGGGCCCT+CGG + Chr2:78394265-78394284 None:intergenic 50.0%
!! AGGTGGAGAAAAGCTTTGGG+AGG - Chr2:78390066-78390085 MsG0280011016.01.T01:CDS 50.0%
!! CTTTCGGGTTTGGGAGAAGA+TGG - Chr2:78395317-78395336 MsG0280011016.01.T01:CDS 50.0%
!!! TTTTGTGAATGGGCTGGGCT+TGG + Chr2:78394284-78394303 None:intergenic 50.0%
AAGCCGTATGTATGGGCCTG+CGG - Chr2:78394647-78394666 MsG0280011016.01.T01:intron 55.0%
AGGGGTAACCTTGACGCAAC+TGG + Chr2:78393161-78393180 None:intergenic 55.0%
CTATGGCGAACTCGCTTGGT+GGG + Chr2:78394728-78394747 None:intergenic 55.0%
GAGGATGACACGTGGCTTTC+GGG - Chr2:78395302-78395321 MsG0280011016.01.T01:CDS 55.0%
GGATAGGTAACCACGTGTGC+TGG + Chr2:78389083-78389102 None:intergenic 55.0%
GGCTGGGCTTGGACATTTGT+TGG + Chr2:78394273-78394292 None:intergenic 55.0%
GGTGGCATTTCGGCTGTGAT+TGG - Chr2:78394669-78394688 MsG0280011016.01.T01:intron 55.0%
TCTATGGCGAACTCGCTTGG+TGG + Chr2:78394729-78394748 None:intergenic 55.0%
TGATAGGTATCCGCGTGAGC+TGG - Chr2:78389684-78389703 MsG0280011016.01.T01:CDS 55.0%
TTCCATTGTGCCAGCACACG+TGG - Chr2:78389070-78389089 MsG0280011016.01.T01:CDS 55.0%
TTCCATTGTGCCAGCTCACG+CGG + Chr2:78389697-78389716 None:intergenic 55.0%
! AACCACGTGTGCTGGCACAA+TGG + Chr2:78389075-78389094 None:intergenic 55.0%
! ATCTGCGTGTGCTGGCACAA+TGG - Chr2:78390090-78390109 MsG0280011016.01.T01:CDS 55.0%
! GACAAGGAGCTTGGTTCGCT+TGG + Chr2:78393525-78393544 None:intergenic 55.0%
! GGTAGCGCATGATGGTGACA+AGG + Chr2:78393541-78393560 None:intergenic 55.0%
! TGCGTGCAATTGGTGACTGC+AGG - Chr2:78393774-78393793 MsG0280011016.01.T01:intron 55.0%
!! CCCTCGTTTTGCTTGCTACC+AGG - Chr2:78388539-78388558 MsG0280011016.01.T01:CDS 55.0%
!! GACACGTGGCTTTCGGGTTT+GGG - Chr2:78395308-78395327 MsG0280011016.01.T01:CDS 55.0%
!! TGACACGTGGCTTTCGGGTT+TGG - Chr2:78395307-78395326 MsG0280011016.01.T01:CDS 55.0%
AGCCGTATGTATGGGCCTGC+GGG - Chr2:78394648-78394667 MsG0280011016.01.T01:intron 60.0%
ATCCGCGTGAGCTGGCACAA+TGG - Chr2:78389692-78389711 MsG0280011016.01.T01:CDS 60.0%
CACCCGCAGGCCCATACATA+CGG + Chr2:78394653-78394672 None:intergenic 60.0%
! TTTCTGGTCTGGGCTTCCCG+TGG - Chr2:78394449-78394468 MsG0280011016.01.T01:intron 60.0%
!! TGGGAGGTATCTGCGTGTGC+TGG - Chr2:78390082-78390101 MsG0280011016.01.T01:CDS 60.0%
ACAGCCGAAATGCCACCCGC+AGG + Chr2:78394666-78394685 None:intergenic 65.0%
CGTATGTATGGGCCTGCGGG+TGG - Chr2:78394651-78394670 MsG0280011016.01.T01:intron 65.0%
TGGGCCTGCGGGTGGCATTT+CGG - Chr2:78394659-78394678 MsG0280011016.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 78387968 78395655 78387968 ID=MsG0280011016.01;Name=MsG0280011016.01
Chr2 mRNA 78387968 78395655 78387968 ID=MsG0280011016.01.T01;Parent=MsG0280011016.01;Name=MsG0280011016.01.T01;_AED=0.35;_eAED=0.35;_QI=29|1|1|1|1|1|3|105|798
Chr2 exon 78387968 78389737 78387968 ID=MsG0280011016.01.T01:exon:21238;Parent=MsG0280011016.01.T01
Chr2 exon 78390061 78390228 78390061 ID=MsG0280011016.01.T01:exon:21237;Parent=MsG0280011016.01.T01
Chr2 exon 78395063 78395655 78395063 ID=MsG0280011016.01.T01:exon:21236;Parent=MsG0280011016.01.T01
Chr2 five_prime_UTR 78395627 78395655 78395627 ID=MsG0280011016.01.T01:five_prime_utr;Parent=MsG0280011016.01.T01
Chr2 CDS 78395063 78395626 78395063 ID=MsG0280011016.01.T01:cds;Parent=MsG0280011016.01.T01
Chr2 CDS 78390061 78390228 78390061 ID=MsG0280011016.01.T01:cds;Parent=MsG0280011016.01.T01
Chr2 CDS 78388073 78389737 78388073 ID=MsG0280011016.01.T01:cds;Parent=MsG0280011016.01.T01
Chr2 three_prime_UTR 78387968 78388072 78387968 ID=MsG0280011016.01.T01:three_prime_utr;Parent=MsG0280011016.01.T01
Gene Sequence

>MsG0280011016.01.T01

ATGGAGAGATCACCACTAAACCTTATGGTGAGTTTCTTCAACATTCCACCATTGTGGAGAGAGTGTCTCTCTTCAGCATTCAGAACCGCCTTAGCTTGCACCATAGTAGCTGGTGCAACACTTTATGGACCTACTTCAATTACAAGCCTAATAACATTCCCTGCATTTTCATACGTGGTTGTGATTCTCATTATCATAAATGATGCTACTTTAGGTGACTCTTTACGTGGTTGTTGGCTAGGGCTTTATGCTACAATTCAAAGTTTAGGTCCAGCTATGTTGAGTTTATGGGCTATAGGTCCAAATCATTTCTCTAAAGGAACAGCTTCTATTGCTGTGGCTTTGGCTGCATTTGTTGTGGTTTTACCTTCTCAATCAACACATTTGATAGCTAAGAGAATTTCATTGGGTCAGATTGTGTTGGTGTATGTATTGGCTTATTCTAATGGTGCTCATATTGATCCTATTATGCATCCTATTCATTTGGCAGCTAGTACTGCTTTAGGTGTACTTGCTTGTGTGGTTGCATTGCTTCTTCCTTACCCTCGTTTTGCTTGCTACCAGGTGAACAAAAACTACAAGCTATTAACAAATAATGTGTTGAAGAGATTGAAGATTCTTGTAAAGGTAATTAGTGAGGAGGAAAATACTTCTGCACTTGGATTAATCTCTCGTGCTAAGTCTTTGGCAACCAAGCGAACCAAGCTCCTTGTCACCATCATGCGCTACCTAGATGGCATGAAGTGGGAGAAGCTTCCAATTAATTTTTTCAAACCACATTACAATAAATTGGGAGAGAAACTTCAAGAGGTAGATACCAATCTAATAGGAATGGAATTGGCTTTAAGTTCCTACAAATCATTCCCAATCAACATTCTTGACCAAGACCTTAAACATGGTCTAAACACACTTGAGGAGCATGTCAGCCTAACCATTAAAAATGCTAAACACTCTTTCCTTGGTGGTGGTTCACTTACTGTTCCTGAATCCAATGCAAAAAACATAACACATTTTCTTCAATCCCTTCATACCATTCCAACAACTCACCAAGAATTACCCATCTTTTTCTTCCTATTTTGTGCCAAACTCCTTCACATGAAATCATCAACCGAGGGCCCAACAAATGTCCAAGCCCAGCCCATTCACAAAAAAGAAATTTCTCACGAAGGTAACGACGATAAATGGGCTAATTGGGCCACAAAATTGAAAAGCTCAAATCTTCTCCCGGCGATAAAGTACTCTTTCGCATTGGGCCTATCAGTCTTCATGGGCTTATTGTATAGCAAAGAAAGTGGTTTCTGGTCTGGGCTTCCCGTGGCCGTAAGCTATGTTTCAGGTAGAGAAGCCACTTTTCGGGCCGCAAATGTTAAAGCCCAAGGAACGGTGATTGGAACTGTGTACGGTGTGTTGGGTTGTTTTGTGTTTAATAGATTACTGTCAGTTAGATTCTTGTCACTACTTCCATGGTTCATTTTCACAAGTTTCCTTCAACGAAGCCGTATGTATGGGCCTGCGGGTGGCATTTCGGCTGTGATTGGGGCCGTTTTAATATTGGGCCGAAAAAACATAGGCCCACCAAGCGAGTTCGCCATAGAAAGAATCATCGAAACTTTTATTGGGCTTTCATGTTCTATTTTTGTGGATCTTCTTTTCTGGCCCAAAAGGGCTTCAACATGTGCCAAATATGAACTCTCCCAATGTTTGTCCACACTTGTTGAATCAATTGGAACATTGAGCCTAGATAGCAAAACTGATTCACAATTGGGAGAAAATCAAAGAAAACTTAAGGCCCAAGTTAATGAGCTTAGAAAATTTGTGGTAGAGGCAGAAGCTGAACCTAATTTTTGGTTTTTACCATTTCATAGTGGTTGCTATAATAGGCTTTTAGGCTCATTATCAAAGTTAGTGGATGTTTTGCATTTTGGAGAACGTGCATTAAAATCACTTCAGCAAGAGTTTCAAAGAAGTGACAATTTTGTGAATGAGGAAGTGAATATGTTACAAAGTGAACTTCTACATGTTAAGGAAATTATTTGCTCTTCCATCAAAGGTCTTGAAGAAATTTCCAAGATGAAATCATTCAAGTTTGTAGAGAAAGAAATTGAAAAAAAGAACATGTCTAATGATGTTGAAATGGGAAAGTCAAGAGAGGATGACACGTGGCTTTCGGGTTTGGGAGAAGATGGAATAAGAGAAATCATAGAGACTTTTCTTCAAAGGTCAAGAGATGTTGAGAAGTTGTATAGTGATGAAGGTGAGAAGGAGGTGAAGAGTGAAGTTGTTTTGAGTTTGAGTGTTGTTGGGTTTTGTTTGAGTGTGTGCATGCATGGGACAATAGAGATTGAAAAGGCAATGAGGGAACTTGTTCAATGGGAGAATCCCTCTAGCAGTATTTAA

Protein sequence

>MsG0280011016.01.T01

MERSPLNLMVSFFNIPPLWRECLSSAFRTALACTIVAGATLYGPTSITSLITFPAFSYVVVILIIINDATLGDSLRGCWLGLYATIQSLGPAMLSLWAIGPNHFSKGTASIAVALAAFVVVLPSQSTHLIAKRISLGQIVLVYVLAYSNGAHIDPIMHPIHLAASTALGVLACVVALLLPYPRFACYQVNKNYKLLTNNVLKRLKILVKVISEEENTSALGLISRAKSLATKRTKLLVTIMRYLDGMKWEKLPINFFKPHYNKLGEKLQEVDTNLIGMELALSSYKSFPINILDQDLKHGLNTLEEHVSLTIKNAKHSFLGGGSLTVPESNAKNITHFLQSLHTIPTTHQELPIFFFLFCAKLLHMKSSTEGPTNVQAQPIHKKEISHEGNDDKWANWATKLKSSNLLPAIKYSFALGLSVFMGLLYSKESGFWSGLPVAVSYVSGREATFRAANVKAQGTVIGTVYGVLGCFVFNRLLSVRFLSLLPWFIFTSFLQRSRMYGPAGGISAVIGAVLILGRKNIGPPSEFAIERIIETFIGLSCSIFVDLLFWPKRASTCAKYELSQCLSTLVESIGTLSLDSKTDSQLGENQRKLKAQVNELRKFVVEAEAEPNFWFLPFHSGCYNRLLGSLSKLVDVLHFGERALKSLQQEFQRSDNFVNEEVNMLQSELLHVKEIICSSIKGLEEISKMKSFKFVEKEIEKKNMSNDVEMGKSREDDTWLSGLGEDGIREIIETFLQRSRDVEKLYSDEGEKEVKSEVVLSLSVVGFCLSVCMHGTIEIEKAMRELVQWENPSSSI*