AlfalfaGEDB | MsG0480018918.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018918.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018918.01.T01	KEH29001.1	73.387	124	2	1	49	172	46	138	2.36E-50	177

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018918.01.T01	Q9M324	58.065	124	21	1	49	172	43	135	1.09E-40	146

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018918.01.T01	A0A072UHU0	73.387	124	2	1	49	172	46	138	1.13e-50	177

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048700.01	MsG0480018918.01	0.817457	3.265271e-52	2.379319e-49
MsG0080048701.01	MsG0480018918.01	0.813748	2.187866e-51	1.440773e-48
MsG0080048781.01	MsG0480018918.01	0.813265	2.793352e-51	1.815541e-48
MsG0080048996.01	MsG0480018918.01	0.819545	1.098130e-52	8.475679e-50
MsG0080049140.01	MsG0480018918.01	0.839547	1.484125e-57	2.056247e-54
MsG0180000111.01	MsG0480018918.01	0.837502	5.004452e-57	6.513987e-54
MsG0180000353.01	MsG0480018918.01	0.829129	6.117424e-55	6.204570e-52
MsG0180000360.01	MsG0480018918.01	0.808936	2.424353e-50	1.404372e-47
MsG0180000373.01	MsG0480018918.01	0.858026	1.092653e-62	2.750537e-59
MsG0180002421.01	MsG0480018918.01	0.857728	1.339023e-62	3.337249e-59
MsG0180003427.01	MsG0480018918.01	0.845851	3.137909e-59	5.300046e-56
MsG0180003485.01	MsG0480018918.01	0.814972	1.173501e-51	7.988223e-49
MsG0180003796.01	MsG0480018918.01	0.835746	1.402334e-56	1.730784e-53
MsG0180003994.01	MsG0480018918.01	0.825830	3.783834e-54	3.487749e-51
MsG0180004099.01	MsG0480018918.01	0.810740	9.920374e-51	6.028354e-48
MsG0180004126.01	MsG0480018918.01	0.838595	2.620058e-57	3.526329e-54
MsG0180004806.01	MsG0480018918.01	0.852186	5.445104e-61	1.128752e-57
MsG0180004989.01	MsG0480018918.01	0.804305	2.302495e-49	1.183117e-46
MsG0180005002.01	MsG0480018918.01	0.849864	2.459347e-60	4.727484e-57
MsG0180005835.01	MsG0480018918.01	0.820214	7.721547e-53	6.071765e-50
MsG0180006000.01	MsG0480018918.01	0.828566	8.371480e-55	8.352185e-52
MsG0280006311.01	MsG0480018918.01	0.841331	5.070893e-58	7.425547e-55
MsG0280010779.01	MsG0480018918.01	0.815852	7.474579e-52	5.211915e-49
MsG0280010795.01	MsG0480018918.01	0.813450	2.544289e-51	1.662165e-48
MsG0280011154.01	MsG0480018918.01	0.845527	3.841945e-59	6.420896e-56
MsG0280011282.01	MsG0480018918.01	0.827042	1.946539e-54	1.857516e-51
MsG0280011399.01	MsG0480018918.01	0.805876	1.080215e-49	5.779619e-47
MsG0380013636.01	MsG0480018918.01	0.809319	2.007103e-50	1.174684e-47
MsG0380014132.01	MsG0480018918.01	0.822917	1.833144e-53	1.555376e-50
MsG0380014171.01	MsG0480018918.01	0.817312	3.520161e-52	2.554656e-49
MsG0380014754.01	MsG0480018918.01	0.832838	7.520481e-56	8.506432e-53
MsG0480018526.01	MsG0480018918.01	0.844775	6.134520e-59	1.000988e-55
MsG0480018918.01	MsG0480018919.01	0.850545	1.584224e-60	3.114035e-57
MsG0480018918.01	MsG0480019635.01	0.865482	5.721635e-65	1.864395e-61
MsG0480018918.01	MsG0480019699.01	0.828916	6.889743e-55	6.943667e-52
MsG0480018918.01	MsG0480020965.01	0.824826	6.540610e-54	5.858835e-51
MsG0480018918.01	MsG0480021013.01	0.842444	2.575815e-58	3.906739e-55
MsG0480018918.01	MsG0480021156.01	0.805123	1.553669e-49	8.153713e-47
MsG0480018918.01	MsG0480022325.01	0.833165	6.235966e-56	7.123358e-53
MsG0480018918.01	MsG0480022331.01	0.837713	4.419321e-57	5.789905e-54
MsG0480018918.01	MsG0480022982.01	0.808366	3.208191e-50	1.831028e-47
MsG0480018918.01	MsG0480022998.01	0.817481	3.224885e-52	2.351382e-49
MsG0480018918.01	MsG0480023194.01	0.801989	6.938612e-49	3.360183e-46
MsG0480018918.01	MsG0480023262.01	0.848159	7.317941e-60	1.330759e-56
MsG0480018918.01	MsG0480023296.01	0.848843	4.734164e-60	8.803201e-57
MsG0480018918.01	MsG0480023324.01	0.824847	6.464795e-54	5.794420e-51
MsG0480018918.01	MsG0480023450.01	0.812544	4.020029e-51	2.563259e-48
MsG0480018918.01	MsG0480023541.01	0.823476	1.357193e-53	1.169823e-50
MsG0480018918.01	MsG0480023620.01	0.822280	2.577720e-53	2.147918e-50
MsG0480018918.01	MsG0480023672.01	0.835035	2.121021e-56	2.562321e-53
MsG0480018918.01	MsG0580024035.01	0.803514	3.361033e-49	1.692371e-46
MsG0480018918.01	MsG0580024109.01	0.801459	8.915760e-49	4.260057e-46
MsG0480018918.01	MsG0580024330.01	0.800136	1.660378e-48	7.672156e-46
MsG0480018918.01	MsG0580024489.01	0.855511	6.008292e-62	1.390370e-58
MsG0480018918.01	MsG0580024758.01	0.836184	1.085937e-56	1.358315e-53
MsG0480018918.01	MsG0580024813.01	0.824437	8.077745e-54	7.154427e-51
MsG0480018918.01	MsG0580024954.01	0.827248	1.737290e-54	1.668023e-51
MsG0480018918.01	MsG0580025093.01	0.817771	2.773832e-52	2.038666e-49
MsG0480018918.01	MsG0580025385.01	0.804508	2.088452e-49	1.078714e-46
MsG0480018918.01	MsG0580025515.01	0.805180	1.511775e-49	7.945278e-47
MsG0480018918.01	MsG0580025614.01	0.810186	1.306567e-50	7.823338e-48
MsG0480018918.01	MsG0580025740.01	0.807925	3.983708e-50	2.247104e-47
MsG0480018918.01	MsG0580025766.01	0.830480	2.868202e-55	3.025401e-52
MsG0480018918.01	MsG0580026186.01	0.852088	5.805522e-61	1.199720e-57
MsG0480018918.01	MsG0580028756.01	0.857304	1.788591e-62	4.394393e-59
MsG0480018918.01	MsG0580029298.01	0.844185	8.841737e-59	1.416252e-55
MsG0480018918.01	MsG0580029712.01	0.831304	1.800583e-55	1.946132e-52
MsG0480018918.01	MsG0680030763.01	0.807469	4.978008e-50	2.775045e-47
MsG0480018918.01	MsG0680031384.01	0.800408	1.461479e-48	6.800046e-46
MsG0480018918.01	MsG0680031386.01	0.807251	5.537395e-50	3.069324e-47
MsG0480018918.01	MsG0680031616.01	0.824449	8.023391e-54	7.108443e-51
MsG0480018918.01	MsG0680034598.01	0.821668	3.573377e-53	2.925980e-50
MsG0480018918.01	MsG0780036360.01	0.812419	4.280187e-51	2.720191e-48
MsG0480018918.01	MsG0780036752.01	0.819088	1.395709e-52	1.063642e-49
MsG0480018918.01	MsG0780038837.01	0.803242	3.828073e-49	1.913990e-46
MsG0480018918.01	MsG0780039189.01	0.811142	8.116268e-51	4.984941e-48
MsG0480018918.01	MsG0780039533.01	0.818867	1.566716e-52	1.186758e-49
MsG0480018918.01	MsG0780039861.01	0.845984	2.888037e-59	4.899061e-56
MsG0480018918.01	MsG0780040307.01	0.810135	1.339684e-50	8.011426e-48
MsG0480018918.01	MsG0780040364.01	0.814839	1.255512e-51	8.515860e-49
MsG0480018918.01	MsG0780040482.01	0.827431	1.570645e-54	1.516044e-51
MsG0480018918.01	MsG0780040483.01	0.804103	2.536587e-49	1.296675e-46
MsG0480018918.01	MsG0780040509.01	0.815002	1.155291e-51	7.871144e-49
MsG0480018918.01	MsG0780040543.01	0.818035	2.418469e-52	1.790236e-49
MsG0480018918.01	MsG0780040896.01	0.835375	1.740229e-56	2.124156e-53
MsG0480018918.01	MsG0780041063.01	0.878120	3.630977e-69	1.872824e-65
MsG0480018918.01	MsG0780041132.01	0.846881	1.643837e-59	2.869806e-56
MsG0480018918.01	MsG0780041141.01	0.808870	2.504286e-50	1.448162e-47
MsG0480018918.01	MsG0780041143.01	0.834290	3.265156e-56	3.857887e-53
MsG0480018918.01	MsG0780041340.01	0.828518	8.598960e-55	8.567197e-52
MsG0480018918.01	MsG0780041739.01	0.809638	1.713888e-50	1.011713e-47
MsG0480018918.01	MsG0880042791.01	0.802103	6.576634e-49	3.194075e-46
MsG0480018918.01	MsG0880042845.01	0.809097	2.238671e-50	1.302513e-47
MsG0480018918.01	MsG0880043297.01	0.801716	7.896559e-49	3.797583e-46
MsG0480018918.01	MsG0880043516.01	0.822204	2.684535e-53	2.231980e-50
MsG0480018918.01	MsG0880043637.01	0.802124	6.510111e-49	3.163475e-46
MsG0480018918.01	MsG0880043951.01	0.804327	2.278835e-49	1.171597e-46
MsG0480018918.01	MsG0880046165.01	0.801372	9.286598e-49	4.427684e-46
MsG0480018918.01	MsG0880046431.01	0.815695	8.103959e-52	5.626816e-49
MsG0480018918.01	MsG0880046885.01	0.828751	7.553907e-55	7.576190e-52
MsG0480018918.01	MsG0880047223.01	0.820122	8.104321e-53	6.357399e-50
MsG0480018918.01	MsG0880047226.01	0.868065	8.608672e-66	3.072729e-62
MsG0480018918.01	MsG0880047431.01	0.819903	9.092856e-53	7.088814e-50
MsG0480018918.01	MsG0880047466.01	0.825763	3.926146e-54	3.611966e-51
MsG0480018918.01	MsG0880047666.01	0.813685	2.258167e-51	1.484639e-48
MsG0380015350.01	MsG0480018918.01	0.819053	1.421262e-52	1.082119e-49
MsG0380015548.01	MsG0480018918.01	0.864998	8.117492e-65	2.600279e-61
MsG0380015816.01	MsG0480018918.01	0.831050	2.079770e-55	2.231074e-52
MsG0380016140.01	MsG0480018918.01	0.802037	6.784312e-49	3.289488e-46
MsG0380016703.01	MsG0480018918.01	0.854206	1.435901e-61	3.183102e-58
MsG0380016994.01	MsG0480018918.01	0.804845	1.776080e-49	9.254860e-47
MsG0380017159.01	MsG0480018918.01	0.818108	2.328557e-52	1.727149e-49
MsG0380017164.01	MsG0480018918.01	0.852734	3.800701e-61	8.018139e-58
MsG0380017239.01	MsG0480018918.01	0.831933	1.260665e-55	1.388398e-52
MsG0380017361.01	MsG0480018918.01	0.813855	2.071599e-51	1.368214e-48
MsG0380017372.01	MsG0480018918.01	0.800815	1.207262e-48	5.675221e-46
MsG0480018230.01	MsG0480018918.01	0.800238	1.582658e-48	7.331926e-46
MsG0480018397.01	MsG0480018918.01	0.837820	4.146905e-57	5.450914e-54
MsG0280006477.01	MsG0480018918.01	0.804513	2.084230e-49	1.076647e-46
MsG0280006540.01	MsG0480018918.01	0.828502	8.676067e-55	8.639891e-52
MsG0280006563.01	MsG0480018918.01	0.826321	2.892685e-54	2.703746e-51
MsG0280007359.01	MsG0480018918.01	0.841801	3.811772e-58	5.664123e-55
MsG0280007761.01	MsG0480018918.01	0.812805	3.523241e-51	2.261725e-48
MsG0280008280.01	MsG0480018918.01	0.817454	3.270484e-52	2.382900e-49
MsG0280008407.01	MsG0480018918.01	0.804554	2.043369e-49	1.056700e-46
MsG0280009514.01	MsG0480018918.01	0.803383	3.578424e-49	1.795650e-46
MsG0280009752.01	MsG0480018918.01	0.819963	8.811436e-53	6.881043e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018918.01.T01	MTR_4g020070	73.387	124	2	1	49	172	46	138	2.86e-54	177
MsG0480018918.01.T01	MTR_4g020070	73.387	124	2	1	49	172	46	138	9.47e-54	178
MsG0480018918.01.T01	MTR_8g031030	57.258	124	22	1	49	172	46	138	1.18e-38	138
MsG0480018918.01.T01	MTR_4g065003	54.839	124	25	1	49	172	47	139	4.32e-38	135
MsG0480018918.01.T01	MTR_4g065003	54.839	124	25	1	49	172	47	139	1.15e-37	135
MsG0480018918.01.T01	MTR_7g077150	54.032	124	26	1	49	172	46	138	1.99e-36	132
MsG0480018918.01.T01	MTR_8g098370	51.613	124	29	1	49	172	48	140	1.07e-33	124
MsG0480018918.01.T01	MTR_8g098370	51.613	124	29	1	49	172	48	140	1.39e-33	124
MsG0480018918.01.T01	MTR_4g098740	49.194	124	32	1	49	172	50	142	1.82e-31	119
MsG0480018918.01.T01	MTR_5g098970	49.640	139	32	3	35	172	66	167	6.02e-30	114
MsG0480018918.01.T01	MTR_2g097860	44.262	122	24	1	51	172	32	109	3.10e-26	102

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018918.01.T01	AT3G54030	58.065	124	21	1	49	172	43	135	1.11e-41	146
MsG0480018918.01.T01	AT4G00710	57.258	124	22	1	49	172	45	137	5.16e-39	139
MsG0480018918.01.T01	AT4G00710	57.258	124	22	1	49	172	45	137	5.16e-39	139
MsG0480018918.01.T01	AT1G63500	55.645	124	24	1	49	172	46	138	1.91e-38	137
MsG0480018918.01.T01	AT5G41260	52.419	124	28	1	49	172	46	138	4.25e-37	134
MsG0480018918.01.T01	AT5G59010	53.226	124	27	1	49	172	42	134	4.98e-34	125
MsG0480018918.01.T01	AT3G09240	47.581	124	34	1	49	172	31	123	1.53e-31	119
MsG0480018918.01.T01	AT3G09240	47.581	124	34	1	49	172	46	138	2.21e-31	118
MsG0480018918.01.T01	AT1G01740	50.806	124	30	1	49	172	43	135	7.73e-31	117
MsG0480018918.01.T01	AT1G01740	50.806	124	30	1	49	172	43	135	8.81e-31	117
MsG0480018918.01.T01	AT1G01740	50.806	124	30	1	49	172	43	135	8.81e-31	117
MsG0480018918.01.T01	AT4G35230	50.820	122	29	1	51	172	65	155	2.14e-30	116
MsG0480018918.01.T01	AT5G46570	47.581	124	34	1	49	172	43	135	4.09e-30	115
MsG0480018918.01.T01	AT5G01060	44.715	123	37	1	49	171	50	141	3.98e-28	107
MsG0480018918.01.T01	AT5G01060	44.715	123	37	1	49	171	50	141	2.44e-27	107

Find 36 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTAAGCATCTCTTTCATTGT+AGG	0.272219	4:+11737584	MsG0480018918.01.T01:CDS
TTCCCTTTGTAACCAACATT+TGG	0.342102	4:-11737089	None:intergenic
AACAATGAATTGTCGAGAAT+CGG	0.387156	4:-11737165	None:intergenic
TCGCCAAACGATCACTTCTA+AGG	0.408329	4:-11737490	None:intergenic
GTTCTTGAATCCTCTGACCA+AGG	0.421943	4:+11736762	MsG0480018918.01.T01:CDS
AGATAATATCTTGCATGAAA+TGG	0.426195	4:-11737222	None:intergenic
GCTCTAAATTCTCTTTCTGC+TGG	0.430452	4:+11736715	MsG0480018918.01.T01:CDS
GATCGTTTGGCGAATTTGAT+TGG	0.431219	4:+11737500	MsG0480018918.01.T01:CDS
TTGATTGGTTGTTGCTATGA+AGG	0.442906	4:+11737515	MsG0480018918.01.T01:CDS
GGACCTTAGAAGTGATCGTT+TGG	0.458845	4:+11737487	MsG0480018918.01.T01:CDS
ACAATGAATTGTCGAGAATC+GGG	0.460524	4:-11737164	None:intergenic
CTCCAAATGTTGGTTACAAA+GGG	0.474679	4:+11737087	MsG0480018918.01.T01:CDS
GTACAGTTTGGAAGAATTGA+AGG	0.482014	4:+11737010	MsG0480018918.01.T01:intron
GAATTGAAGGCTGCTACAAA+TGG	0.497274	4:+11737023	MsG0480018918.01.T01:CDS
GCTCCAAATGTTGGTTACAA+AGG	0.503634	4:+11737086	MsG0480018918.01.T01:CDS
AACGTTTCAACAAGTTCGCT+TGG	0.507748	4:+11737141	MsG0480018918.01.T01:CDS
GAACTTGTTGAAACGTTTGA+CGG	0.521430	4:-11737135	None:intergenic
TACAAAGGGAAACTTGAGAA+TGG	0.544684	4:+11737101	MsG0480018918.01.T01:CDS
AGTTTATGCCACATGAACTC+TGG	0.555057	4:+11737561	MsG0480018918.01.T01:CDS
TAGGAAGAATCTAAACAAGT+GGG	0.556675	4:+11737464	MsG0480018918.01.T01:intron
AGAACACAATGAAGTGAAAG+TGG	0.568385	4:-11737198	None:intergenic
CACTGTCCTAGTTCTAATTG+TGG	0.575006	4:+11737256	MsG0480018918.01.T01:CDS
TGCTACAAATGGTTTCTCCT+CGG	0.576389	4:+11737034	MsG0480018918.01.T01:CDS
GTAGGAAGAATCTAAACAAG+TGG	0.580662	4:+11737463	MsG0480018918.01.T01:intron
AACAAAGTAAAACACAACCT+TGG	0.587493	4:-11736779	None:intergenic
CAGAAGTATTGAGATGAGAG+TGG	0.597989	4:-11736740	None:intergenic
GGTGAGAAAGCTCCAAATGT+TGG	0.598384	4:+11737077	MsG0480018918.01.T01:CDS
GAAAACATAGTTTCTGAGCA+TGG	0.608446	4:+11737056	MsG0480018918.01.T01:CDS
TGCAGACCACAATTAGAACT+AGG	0.610858	4:-11737262	None:intergenic
TAAAACACAACCTTGGTCAG+AGG	0.618333	4:-11736772	None:intergenic
ATGCTTAGCCAGAGTTCATG+TGG	0.630751	4:-11737569	None:intergenic
TCATGCAAGATATTATCTTG+CGG	0.634547	4:+11737227	MsG0480018918.01.T01:CDS
GGAAGAATCTAAACAAGTGG+GGG	0.646489	4:+11737466	MsG0480018918.01.T01:intron
AGGAGATGAGAGGCTGCTAG+TGG	0.646691	4:+11737535	MsG0480018918.01.T01:CDS
AGGAAGAATCTAAACAAGTG+GGG	0.655629	4:+11737465	MsG0480018918.01.T01:intron
GTTGCTATGAAGGAGATGAG+AGG	0.745615	4:+11737525	MsG0480018918.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCTTTATTATTGTAGAAAA+TGG	+	Chr4:11736949-11736968	MsG0480018918.01.T01:intron	15.0%
!!	TAAAAAGTGAATTAATTCAA+TGG	-	Chr4:11736890-11736909	None:intergenic	15.0%
!!	TTTATTATTGTAGAAAATGG+TGG	+	Chr4:11736952-11736971	MsG0480018918.01.T01:intron	20.0%
!!!	AAAATATGTTGTGATTTTGT+AGG	+	Chr4:11737445-11737464	MsG0480018918.01.T01:intron	20.0%
!	AGATAATATCTTGCATGAAA+TGG	-	Chr4:11737225-11737244	None:intergenic	25.0%
!!!	AATTATTATCAGTATCGATG+TGG	+	Chr4:11736909-11736928	MsG0480018918.01.T01:intron	25.0%
	AACAAAGTAAAACACAACCT+TGG	-	Chr4:11736782-11736801	None:intergenic	30.0%
	AACAATGAATTGTCGAGAAT+CGG	-	Chr4:11737168-11737187	None:intergenic	30.0%
	TAGGAAGAATCTAAACAAGT+GGG	+	Chr4:11737464-11737483	MsG0480018918.01.T01:intron	30.0%
	TCATGCAAGATATTATCTTG+CGG	+	Chr4:11737227-11737246	MsG0480018918.01.T01:CDS	30.0%
	TTCAATGGAATTACATGTGT+CGG	-	Chr4:11736875-11736894	None:intergenic	30.0%
!!!	TCCTTCTTATTTTCTTCATG+GGG	+	Chr4:11736685-11736704	MsG0480018918.01.T01:CDS	30.0%
	ACAATGAATTGTCGAGAATC+GGG	-	Chr4:11737167-11737186	None:intergenic	35.0%
	AGAACACAATGAAGTGAAAG+TGG	-	Chr4:11737201-11737220	None:intergenic	35.0%
	AGGAAGAATCTAAACAAGTG+GGG	+	Chr4:11737465-11737484	MsG0480018918.01.T01:intron	35.0%
	ATGCCTTTGATCAGAATTGT+CGG	-	Chr4:11736837-11736856	None:intergenic	35.0%
	CAAACTGTACTCATGAAACT+AGG	-	Chr4:11737000-11737019	None:intergenic	35.0%
	CTAAGCATCTCTTTCATTGT+AGG	+	Chr4:11737584-11737603	MsG0480018918.01.T01:CDS	35.0%
	CTAGTTTCATGAGTACAGTT+TGG	+	Chr4:11736998-11737017	MsG0480018918.01.T01:intron	35.0%
	GAAAACATAGTTTCTGAGCA+TGG	+	Chr4:11737056-11737075	MsG0480018918.01.T01:CDS	35.0%
	GATCACATCGATAATCTACA+TGG	-	Chr4:11737305-11737324	None:intergenic	35.0%
	GCAAGAGTGAAAAAAACTTG+TGG	+	Chr4:11736974-11736993	MsG0480018918.01.T01:intron	35.0%
	GTACAGTTTGGAAGAATTGA+AGG	+	Chr4:11737010-11737029	MsG0480018918.01.T01:intron	35.0%
	GTAGGAAGAATCTAAACAAG+TGG	+	Chr4:11737463-11737482	MsG0480018918.01.T01:intron	35.0%
	TACAAAGGGAAACTTGAGAA+TGG	+	Chr4:11737101-11737120	MsG0480018918.01.T01:CDS	35.0%
	TTCCCTTTGTAACCAACATT+TGG	-	Chr4:11737092-11737111	None:intergenic	35.0%
!	CTCCAAATGTTGGTTACAAA+GGG	+	Chr4:11737087-11737106	MsG0480018918.01.T01:CDS	35.0%
!	TTGATTGGTTGTTGCTATGA+AGG	+	Chr4:11737515-11737534	MsG0480018918.01.T01:CDS	35.0%
!!	GAACTTGTTGAAACGTTTGA+CGG	-	Chr4:11737138-11737157	None:intergenic	35.0%
!!!	CCTTCTTATTTTCTTCATGG+GGG	+	Chr4:11736686-11736705	MsG0480018918.01.T01:CDS	35.0%
!!!	CTTCTTATTTTCTTCATGGG+GGG	+	Chr4:11736687-11736706	MsG0480018918.01.T01:CDS	35.0%
	AACGTTTCAACAAGTTCGCT+TGG	+	Chr4:11737141-11737160	MsG0480018918.01.T01:CDS	40.0%
	ACACCGACAATTCTGATCAA+AGG	+	Chr4:11736831-11736850	MsG0480018918.01.T01:intron	40.0%
	AGTTTATGCCACATGAACTC+TGG	+	Chr4:11737561-11737580	MsG0480018918.01.T01:CDS	40.0%
	CCCCCATGAAGAAAATAAGA+AGG	-	Chr4:11736689-11736708	None:intergenic	40.0%
	GAATTGAAGGCTGCTACAAA+TGG	+	Chr4:11737023-11737042	MsG0480018918.01.T01:CDS	40.0%
	GATCGTTTGGCGAATTTGAT+TGG	+	Chr4:11737500-11737519	MsG0480018918.01.T01:CDS	40.0%
	GGAAGAATCTAAACAAGTGG+GGG	+	Chr4:11737466-11737485	MsG0480018918.01.T01:intron	40.0%
	TAAAACACAACCTTGGTCAG+AGG	-	Chr4:11736775-11736794	None:intergenic	40.0%
	TGCAGACCACAATTAGAACT+AGG	-	Chr4:11737265-11737284	None:intergenic	40.0%
	TGCTACAAATGGTTTCTCCT+CGG	+	Chr4:11737034-11737053	MsG0480018918.01.T01:CDS	40.0%
!	CTCAGAAACTATGTTTTCCG+AGG	-	Chr4:11737054-11737073	None:intergenic	40.0%
!	GCTCCAAATGTTGGTTACAA+AGG	+	Chr4:11737086-11737105	MsG0480018918.01.T01:CDS	40.0%
!	GCTCTAAATTCTCTTTCTGC+TGG	+	Chr4:11736715-11736734	MsG0480018918.01.T01:CDS	40.0%
!!	CACTGTCCTAGTTCTAATTG+TGG	+	Chr4:11737256-11737275	MsG0480018918.01.T01:CDS	40.0%
!!	CAGAAGTATTGAGATGAGAG+TGG	-	Chr4:11736743-11736762	None:intergenic	40.0%
	ATGCTTAGCCAGAGTTCATG+TGG	-	Chr4:11737572-11737591	None:intergenic	45.0%
	CAATCACGTTACAACCGCAA+TGG	-	Chr4:11737329-11737348	None:intergenic	45.0%
	GGACCTTAGAAGTGATCGTT+TGG	+	Chr4:11737487-11737506	MsG0480018918.01.T01:CDS	45.0%
	GGTGAGAAAGCTCCAAATGT+TGG	+	Chr4:11737077-11737096	MsG0480018918.01.T01:CDS	45.0%
	GTTCTTGAATCCTCTGACCA+AGG	+	Chr4:11736762-11736781	MsG0480018918.01.T01:CDS	45.0%
	GTTGCTATGAAGGAGATGAG+AGG	+	Chr4:11737525-11737544	MsG0480018918.01.T01:CDS	45.0%
	TATCGATGTGATCGCCATTG+CGG	+	Chr4:11737312-11737331	MsG0480018918.01.T01:intron	45.0%
	TCGCCAAACGATCACTTCTA+AGG	-	Chr4:11737493-11737512	None:intergenic	45.0%
!!	CAGAATTGTCGGTGTTACAG+CGG	-	Chr4:11736826-11736845	None:intergenic	45.0%
	GCAGCTGCAGCATAAAGACT+TGG	-	Chr4:11737361-11737380	None:intergenic	50.0%
	GCTGCAGCATAAAGACTTGG+AGG	-	Chr4:11737358-11737377	None:intergenic	50.0%
	AGGAGATGAGAGGCTGCTAG+TGG	+	Chr4:11737535-11737554	MsG0480018918.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	11736685	11737613	11736685	ID=MsG0480018918.01;Name=MsG0480018918.01
Chr4	mRNA	11736685	11737613	11736685	ID=MsG0480018918.01.T01;Parent=MsG0480018918.01;Name=MsG0480018918.01.T01;_AED=0.63;_eAED=0.72;_QI=0\|0\|0\|1\|0.5\|0.66\|3\|0\|183
Chr4	exon	11736685	11736827	11736685	ID=MsG0480018918.01.T01:exon:7345;Parent=MsG0480018918.01.T01
Chr4	exon	11737016	11737277	11737016	ID=MsG0480018918.01.T01:exon:7346;Parent=MsG0480018918.01.T01
Chr4	exon	11737467	11737613	11737467	ID=MsG0480018918.01.T01:exon:7347;Parent=MsG0480018918.01.T01
Chr4	CDS	11736685	11736827	11736685	ID=MsG0480018918.01.T01:cds;Parent=MsG0480018918.01.T01
Chr4	CDS	11737016	11737277	11737016	ID=MsG0480018918.01.T01:cds;Parent=MsG0480018918.01.T01
Chr4	CDS	11737467	11737613	11737467	ID=MsG0480018918.01.T01:cds;Parent=MsG0480018918.01.T01

Gene Sequence

>MsG0480018918.01.T01

TCCTTCTTATTTTCTTCATGGGGGGTCGTTGCTCTAAATTCTCTTTCTGCTGGTTCCACTCTCATCTCAATACTTCTGTTCTTGAATCCTCTGACCAAGGTTGTGTTTTACTTTGTTATTTTTAGTAGACACATGACACCGCTTTTGGAAGAATTGAAGGCTGCTACAAATGGTTTCTCCTCGGAAAACATAGTTTCTGAGCATGGTGAGAAAGCTCCAAATGTTGGTTACAAAGGGAAACTTGAGAATGGACAGTTGATTGCCGTCAAACGTTTCAACAAGTTCGCTTGGCCCGATTCTCGACAATTCATTGTTTGTTTACTTGCCACTTTCACTTCATTGTGTTCTACCATTTCATGCAAGATATTATCTTGCGGTGCGATCACTGTCCTAGTTCTAATTGTGGAAGAATCTAAACAAGTGGGGGACCTTAGAAGTGATCGTTTGGCGAATTTGATTGGTTGTTGCTATGAAGGAGATGAGAGGCTGCTAGTGGCAGAGTTTATGCCACATGAACTCTGGCTAAGCATCTCTTTCATTGTAGGTTCTTAG

Protein sequence

>MsG0480018918.01.T01

SFLFSSWGVVALNSLSAGSTLISILLFLNPLTKVVFYFVIFSRHMTPLLEELKAATNGFSSENIVSEHGEKAPNVGYKGKLENGQLIAVKRFNKFAWPDSRQFIVCLLATFTSLCSTISCKILSCGAITVLVLIVEESKQVGDLRSDRLANLIGCCYEGDERLLVAEFMPHELWLSISFIVGS*