Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048700.01.T01 | KEH30905.1 | 90.574 | 244 | 23 | 0 | 4 | 247 | 1 | 244 | 8.59E-148 | 448 |
MsG0080048700.01.T01 | KEH30905.1 | 43.946 | 223 | 99 | 3 | 141 | 341 | 277 | 495 | 1.96E-38 | 157 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048700.01.T01 | Q9SLN1 | 34.34 | 265 | 141 | 4 | 4 | 247 | 1 | 253 | 1.35E-27 | 117 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048700.01.T01 | A0A072UYJ5 | 90.574 | 244 | 23 | 0 | 4 | 247 | 1 | 244 | 4.10e-148 | 448 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0080048700.01 | 0.824557 | 7.566323e-54 | 6.725330e-51 |
MsG0080048029.01 | MsG0080048700.01 | 0.815611 | 8.457946e-52 | 5.859691e-49 |
MsG0080048058.01 | MsG0080048700.01 | 0.801370 | 9.298457e-49 | 4.433049e-46 |
MsG0080048700.01 | MsG0080048701.01 | 0.822238 | 2.635990e-53 | 2.193770e-50 |
MsG0080048700.01 | MsG0180000001.01 | 0.801987 | 6.946543e-49 | 3.363806e-46 |
MsG0080048700.01 | MsG0180000024.01 | 0.811386 | 7.186626e-51 | 4.442338e-48 |
MsG0080048700.01 | MsG0180000300.01 | 0.811199 | 7.887229e-51 | 4.851623e-48 |
MsG0080048700.01 | MsG0180000353.01 | 0.829683 | 4.487155e-55 | 4.625811e-52 |
MsG0080048700.01 | MsG0180000360.01 | 0.829621 | 4.646344e-55 | 4.780915e-52 |
MsG0080048700.01 | MsG0180000373.01 | 0.806069 | 9.840009e-50 | 5.290834e-47 |
MsG0080048700.01 | MsG0180000741.01 | 0.802393 | 5.730839e-49 | 2.804162e-46 |
MsG0080048700.01 | MsG0180000836.01 | 0.800975 | 1.119967e-48 | 5.286719e-46 |
MsG0080048700.01 | MsG0180001117.01 | 0.819955 | 8.847688e-53 | 6.907757e-50 |
MsG0080048700.01 | MsG0180001173.01 | 0.823996 | 1.025313e-53 | 8.967853e-51 |
MsG0080048700.01 | MsG0180001178.01 | 0.832826 | 7.573008e-56 | 8.562926e-53 |
MsG0080048700.01 | MsG0180001565.01 | 0.834787 | 2.449019e-56 | 2.936506e-53 |
MsG0080048700.01 | MsG0180001566.01 | 0.851279 | 9.841284e-61 | 1.981727e-57 |
MsG0080048700.01 | MsG0180001911.01 | 0.804479 | 2.118140e-49 | 1.093246e-46 |
MsG0080048700.01 | MsG0180002071.01 | 0.814113 | 1.817539e-51 | 1.208840e-48 |
MsG0080048700.01 | MsG0180003281.01 | 0.806699 | 7.245957e-50 | 3.959187e-47 |
MsG0080048700.01 | MsG0180003361.01 | 0.803556 | 3.295032e-49 | 1.660962e-46 |
MsG0080048700.01 | MsG0180003444.01 | 0.806948 | 6.418017e-50 | 3.529495e-47 |
MsG0080048700.01 | MsG0180003820.01 | 0.818059 | 2.388715e-52 | 1.769390e-49 |
MsG0080048700.01 | MsG0180003858.01 | 0.860314 | 2.251999e-63 | 6.129522e-60 |
MsG0080048700.01 | MsG0180004099.01 | 0.801553 | 8.530320e-49 | 4.085502e-46 |
MsG0080048700.01 | MsG0180004357.01 | 0.820657 | 6.108595e-53 | 4.862508e-50 |
MsG0080048700.01 | MsG0180004754.01 | 0.830454 | 2.910802e-55 | 3.067855e-52 |
MsG0080048700.01 | MsG0180004970.01 | 0.820005 | 8.619334e-53 | 6.738913e-50 |
MsG0080048700.01 | MsG0180004989.01 | 0.859610 | 3.672284e-63 | 9.755156e-60 |
MsG0080048700.01 | MsG0180005188.01 | 0.820211 | 7.732525e-53 | 6.079961e-50 |
MsG0080048700.01 | MsG0180005443.01 | 0.805500 | 1.295659e-49 | 6.865521e-47 |
MsG0080048700.01 | MsG0180005504.01 | 0.828186 | 1.033865e-54 | 1.020133e-51 |
MsG0080048700.01 | MsG0180005559.01 | 0.808471 | 3.046694e-50 | 1.743612e-47 |
MsG0080048700.01 | MsG0180005921.01 | 0.832435 | 9.469534e-56 | 1.058333e-52 |
MsG0080048700.01 | MsG0180006023.01 | 0.826025 | 3.402093e-54 | 3.153239e-51 |
MsG0080048700.01 | MsG0180006235.01 | 0.819805 | 9.575497e-53 | 7.444891e-50 |
MsG0080048700.01 | MsG0180006260.01 | 0.830277 | 3.214435e-55 | 3.370886e-52 |
MsG0080048700.01 | MsG0280006311.01 | 0.812248 | 4.664377e-51 | 2.950682e-48 |
MsG0080048700.01 | MsG0280006692.01 | 0.801945 | 7.085599e-49 | 3.427442e-46 |
MsG0080048700.01 | MsG0280007089.01 | 0.811917 | 5.506475e-51 | 3.451947e-48 |
MsG0080048700.01 | MsG0280007609.01 | 0.803926 | 2.760573e-49 | 1.404876e-46 |
MsG0080048700.01 | MsG0280007740.01 | 0.808532 | 2.957339e-50 | 1.695087e-47 |
MsG0080048700.01 | MsG0280007790.01 | 0.832512 | 9.062595e-56 | 1.015194e-52 |
MsG0080048700.01 | MsG0280008280.01 | 0.835062 | 2.088302e-56 | 2.524805e-53 |
MsG0080048700.01 | MsG0280008614.01 | 0.827167 | 1.817001e-54 | 1.740322e-51 |
MsG0080048700.01 | MsG0280008763.01 | 0.805668 | 1.194755e-49 | 6.358368e-47 |
MsG0080048700.01 | MsG0280008909.01 | 0.806757 | 7.046032e-50 | 3.855660e-47 |
MsG0080048700.01 | MsG0280009255.01 | 0.805698 | 1.177391e-49 | 6.271167e-47 |
MsG0080048700.01 | MsG0280009514.01 | 0.858628 | 7.229552e-63 | 1.856797e-59 |
MsG0080048700.01 | MsG0280009515.01 | 0.811057 | 8.467196e-51 | 5.189063e-48 |
MsG0080048700.01 | MsG0280010001.01 | 0.842683 | 2.226608e-58 | 3.401785e-55 |
MsG0080048700.01 | MsG0280010173.01 | 0.800977 | 1.118638e-48 | 5.280804e-46 |
MsG0080048700.01 | MsG0280010491.01 | 0.808753 | 2.652562e-50 | 1.529178e-47 |
MsG0080048700.01 | MsG0280010614.01 | 0.803935 | 2.748929e-49 | 1.399268e-46 |
MsG0080048700.01 | MsG0280010735.01 | 0.809035 | 2.308129e-50 | 1.340650e-47 |
MsG0080048700.01 | MsG0280010779.01 | 0.823532 | 1.316542e-53 | 1.136581e-50 |
MsG0080048700.01 | MsG0280010795.01 | 0.839198 | 1.828389e-57 | 2.506456e-54 |
MsG0080048700.01 | MsG0280010868.01 | 0.819131 | 1.364042e-52 | 1.040749e-49 |
MsG0080048700.01 | MsG0280011034.01 | 0.802994 | 4.307614e-49 | 2.140063e-46 |
MsG0080048700.01 | MsG0280011085.01 | 0.809183 | 2.146029e-50 | 1.251485e-47 |
MsG0080048700.01 | MsG0280011258.01 | 0.823109 | 1.653443e-53 | 1.410566e-50 |
MsG0080048700.01 | MsG0280011282.01 | 0.845890 | 3.062817e-59 | 5.179737e-56 |
MsG0080048700.01 | MsG0280011293.01 | 0.823434 | 1.387906e-53 | 1.194860e-50 |
MsG0080048700.01 | MsG0280011336.01 | 0.801897 | 7.248173e-49 | 3.502050e-46 |
MsG0080048700.01 | MsG0380013548.01 | 0.864394 | 1.255420e-64 | 3.935612e-61 |
MsG0080048700.01 | MsG0380015190.01 | 0.804263 | 2.349420e-49 | 1.205894e-46 |
MsG0080048700.01 | MsG0380015548.01 | 0.840861 | 6.735551e-58 | 9.721628e-55 |
MsG0080048700.01 | MsG0380015677.01 | 0.806305 | 8.775190e-50 | 4.746792e-47 |
MsG0080048700.01 | MsG0380015713.01 | 0.808182 | 3.511088e-50 | 1.994195e-47 |
MsG0080048700.01 | MsG0380016236.01 | 0.800668 | 1.293615e-48 | 6.058748e-46 |
MsG0080048700.01 | MsG0380016765.01 | 0.824237 | 8.997284e-54 | 7.923746e-51 |
MsG0080048700.01 | MsG0380016994.01 | 0.863775 | 1.955976e-64 | 6.001383e-61 |
MsG0080048700.01 | MsG0380017049.01 | 0.816764 | 4.673487e-52 | 3.341296e-49 |
MsG0080048700.01 | MsG0380017159.01 | 0.819812 | 9.543759e-53 | 7.421497e-50 |
MsG0080048700.01 | MsG0380017195.01 | 0.825830 | 3.783553e-54 | 3.487499e-51 |
MsG0080048700.01 | MsG0380017239.01 | 0.824346 | 8.485223e-54 | 7.495417e-51 |
MsG0080048700.01 | MsG0380017240.01 | 0.816030 | 6.823190e-52 | 4.781176e-49 |
MsG0080048700.01 | MsG0380017375.01 | 0.801501 | 8.740276e-49 | 4.180775e-46 |
MsG0080048700.01 | MsG0480018230.01 | 0.811354 | 7.301980e-51 | 4.509707e-48 |
MsG0080048700.01 | MsG0480018256.01 | 0.829895 | 3.985191e-55 | 4.133743e-52 |
MsG0080048700.01 | MsG0480018846.01 | 0.804676 | 1.927041e-49 | 9.996906e-47 |
MsG0080048700.01 | MsG0480018885.01 | 0.802731 | 4.880760e-49 | 2.408865e-46 |
MsG0080048700.01 | MsG0480018918.01 | 0.817457 | 3.265271e-52 | 2.379319e-49 |
MsG0080048700.01 | MsG0480019590.01 | 0.829489 | 5.002480e-55 | 5.127459e-52 |
MsG0080048700.01 | MsG0480019635.01 | 0.803194 | 3.915517e-49 | 1.955392e-46 |
MsG0080048700.01 | MsG0480019922.01 | 0.819510 | 1.118288e-52 | 8.623144e-50 |
MsG0080048700.01 | MsG0480020242.01 | 0.813797 | 2.134220e-51 | 1.407344e-48 |
MsG0080048700.01 | MsG0480020495.01 | 0.830878 | 2.291357e-55 | 2.445608e-52 |
MsG0080048700.01 | MsG0480021156.01 | 0.840647 | 7.666465e-58 | 1.099088e-54 |
MsG0080048700.01 | MsG0480021158.01 | 0.807206 | 5.661116e-50 | 3.134198e-47 |
MsG0080048700.01 | MsG0480021778.01 | 0.800015 | 1.757457e-48 | 8.095525e-46 |
MsG0080048700.01 | MsG0480022094.01 | 0.813524 | 2.450971e-51 | 1.604371e-48 |
MsG0080048700.01 | MsG0480022228.01 | 0.812514 | 4.079816e-51 | 2.599303e-48 |
MsG0080048700.01 | MsG0480022325.01 | 0.850138 | 2.060384e-60 | 3.996206e-57 |
MsG0080048700.01 | MsG0480022331.01 | 0.826069 | 3.320846e-54 | 3.081694e-51 |
MsG0080048700.01 | MsG0480022620.01 | 0.816499 | 5.358697e-52 | 3.803247e-49 |
MsG0080048700.01 | MsG0480022719.01 | 0.816464 | 5.456788e-52 | 3.869113e-49 |
MsG0080048700.01 | MsG0480022738.01 | 0.833275 | 5.855168e-56 | 6.710053e-53 |
MsG0080048700.01 | MsG0480023053.01 | 0.817687 | 2.898485e-52 | 2.125261e-49 |
MsG0080048700.01 | MsG0480023130.01 | 0.805997 | 1.018765e-49 | 5.467969e-47 |
MsG0080048700.01 | MsG0480023196.01 | 0.800445 | 1.436708e-48 | 6.690841e-46 |
MsG0080048700.01 | MsG0480023421.01 | 0.819454 | 1.151574e-52 | 8.865973e-50 |
MsG0080048700.01 | MsG0480023500.01 | 0.828248 | 9.989898e-55 | 9.874648e-52 |
MsG0080048700.01 | MsG0480023541.01 | 0.832360 | 9.880296e-56 | 1.101799e-52 |
MsG0080048700.01 | MsG0480023620.01 | 0.869498 | 2.961075e-66 | 1.113809e-62 |
MsG0080048700.01 | MsG0480023718.01 | 0.800200 | 1.611273e-48 | 7.457120e-46 |
MsG0080048700.01 | MsG0480023873.01 | 0.802967 | 4.362664e-49 | 2.165994e-46 |
MsG0080048700.01 | MsG0480023874.01 | 0.809428 | 1.901680e-50 | 1.116260e-47 |
MsG0080048700.01 | MsG0580024035.01 | 0.820965 | 5.190339e-53 | 4.167835e-50 |
MsG0080048700.01 | MsG0580024157.01 | 0.837311 | 5.603206e-57 | 7.249693e-54 |
MsG0080048700.01 | MsG0580024489.01 | 0.836926 | 7.028395e-57 | 8.988091e-54 |
MsG0080048700.01 | MsG0580024618.01 | 0.816744 | 4.722468e-52 | 3.374347e-49 |
MsG0080048700.01 | MsG0580024793.01 | 0.803762 | 2.985893e-49 | 1.513046e-46 |
MsG0080048700.01 | MsG0580025184.01 | 0.804489 | 2.107900e-49 | 1.088226e-46 |
MsG0080048700.01 | MsG0580025352.01 | 0.864579 | 1.098629e-64 | 3.466595e-61 |
MsG0080048700.01 | MsG0580025614.01 | 0.820867 | 5.465204e-53 | 4.376491e-50 |
MsG0080048700.01 | MsG0580027208.01 | 0.850709 | 1.425262e-60 | 2.816606e-57 |
MsG0080048700.01 | MsG0580028060.01 | 0.810816 | 9.550462e-51 | 5.815358e-48 |
MsG0080048700.01 | MsG0580029298.01 | 0.806690 | 7.278928e-50 | 3.976199e-47 |
MsG0080048700.01 | MsG0580029712.01 | 0.803686 | 3.096823e-49 | 1.566143e-46 |
MsG0080048700.01 | MsG0680030436.01 | 0.826180 | 3.124943e-54 | 2.909234e-51 |
MsG0080048700.01 | MsG0680030679.01 | 0.822984 | 1.767629e-53 | 1.502678e-50 |
MsG0080048700.01 | MsG0680030740.01 | 0.810265 | 1.256288e-50 | 7.538173e-48 |
MsG0080048700.01 | MsG0680030763.01 | 0.822601 | 2.170607e-53 | 1.825468e-50 |
MsG0080048700.01 | MsG0680031114.01 | 0.801392 | 9.199390e-49 | 4.388185e-46 |
MsG0080048700.01 | MsG0680034842.01 | 0.803359 | 3.619532e-49 | 1.815121e-46 |
MsG0080048700.01 | MsG0680035764.01 | 0.805529 | 1.277633e-49 | 6.774983e-47 |
MsG0080048700.01 | MsG0780036235.01 | 0.813946 | 1.978909e-51 | 1.310173e-48 |
MsG0080048700.01 | MsG0780036663.01 | 0.826659 | 2.402134e-54 | 2.267040e-51 |
MsG0080048700.01 | MsG0780036752.01 | 0.836924 | 7.035292e-57 | 8.996286e-54 |
MsG0080048700.01 | MsG0780036773.01 | 0.808861 | 2.514928e-50 | 1.453988e-47 |
MsG0080048700.01 | MsG0780036816.01 | 0.802478 | 5.505518e-49 | 2.699556e-46 |
MsG0080048700.01 | MsG0780036823.01 | 0.807967 | 3.902533e-50 | 2.203784e-47 |
MsG0080048700.01 | MsG0780038602.01 | 0.806681 | 7.310317e-50 | 3.992364e-47 |
MsG0080048700.01 | MsG0780038837.01 | 0.805519 | 1.283861e-49 | 6.806187e-47 |
MsG0080048700.01 | MsG0780039654.01 | 0.830322 | 3.135095e-55 | 3.291905e-52 |
MsG0080048700.01 | MsG0780039655.01 | 0.841987 | 3.404082e-58 | 5.088421e-55 |
MsG0080048700.01 | MsG0780039712.01 | 0.849593 | 2.926548e-60 | 5.575629e-57 |
MsG0080048700.01 | MsG0780040488.01 | 0.840073 | 1.083086e-57 | 1.525566e-54 |
MsG0080048700.01 | MsG0780040541.01 | 0.834763 | 2.483582e-56 | 2.975791e-53 |
MsG0080048700.01 | MsG0780040564.01 | 0.810858 | 9.354333e-51 | 5.702430e-48 |
MsG0080048700.01 | MsG0780040669.01 | 0.805891 | 1.072411e-49 | 5.740074e-47 |
MsG0080048700.01 | MsG0780040974.01 | 0.813159 | 2.947271e-51 | 1.909991e-48 |
MsG0080048700.01 | MsG0780041078.01 | 0.807560 | 4.761345e-50 | 2.660348e-47 |
MsG0080048700.01 | MsG0780041212.01 | 0.825929 | 3.586005e-54 | 3.314735e-51 |
MsG0080048700.01 | MsG0780041305.01 | 0.807107 | 5.939607e-50 | 3.279786e-47 |
MsG0080048700.01 | MsG0780041667.01 | 0.812291 | 4.564879e-51 | 2.891081e-48 |
MsG0080048700.01 | MsG0780041787.01 | 0.806865 | 6.683608e-50 | 3.667768e-47 |
MsG0080048700.01 | MsG0880041860.01 | 0.833374 | 5.533493e-56 | 6.360551e-53 |
MsG0080048700.01 | MsG0880042547.01 | 0.835948 | 1.246637e-56 | 1.547865e-53 |
MsG0080048700.01 | MsG0880042552.01 | 0.825193 | 5.356073e-54 | 4.848328e-51 |
MsG0080048700.01 | MsG0880042583.01 | 0.815788 | 7.725731e-52 | 5.378115e-49 |
MsG0080048700.01 | MsG0880042760.01 | 0.823703 | 1.200809e-53 | 1.041893e-50 |
MsG0080048700.01 | MsG0880042845.01 | 0.823327 | 1.470367e-53 | 1.262001e-50 |
MsG0080048700.01 | MsG0880042929.01 | 0.806691 | 7.274521e-50 | 3.973910e-47 |
MsG0080048700.01 | MsG0880043297.01 | 0.803531 | 3.334561e-49 | 1.679795e-46 |
MsG0080048700.01 | MsG0880043299.01 | 0.830299 | 3.176348e-55 | 3.332919e-52 |
MsG0080048700.01 | MsG0880043516.01 | 0.847141 | 1.394759e-59 | 2.455949e-56 |
MsG0080048700.01 | MsG0880043547.01 | 0.817518 | 3.163109e-52 | 2.308662e-49 |
MsG0080048700.01 | MsG0880043750.01 | 0.801332 | 9.465915e-49 | 4.508459e-46 |
MsG0080048700.01 | MsG0880043921.01 | 0.814714 | 1.338690e-51 | 9.049563e-49 |
MsG0080048700.01 | MsG0880044510.01 | 0.800278 | 1.553421e-48 | 7.204023e-46 |
MsG0080048700.01 | MsG0880046027.01 | 0.802700 | 4.954478e-49 | 2.443230e-46 |
MsG0080048700.01 | MsG0880046165.01 | 0.832213 | 1.074808e-55 | 1.193273e-52 |
MsG0080048700.01 | MsG0880046762.01 | 0.825791 | 3.865303e-54 | 3.558973e-51 |
MsG0080048700.01 | MsG0880047120.01 | 0.804597 | 2.001099e-49 | 1.036004e-46 |
MsG0080048700.01 | MsG0880047226.01 | 0.856475 | 3.138325e-62 | 7.500376e-59 |
MsG0080048700.01 | MsG0880047293.01 | 0.850687 | 1.445003e-60 | 2.853529e-57 |
MsG0080048700.01 | MsG0880047431.01 | 0.822046 | 2.920158e-53 | 2.416875e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048700.01.T01 | MTR_4g085570 | 90.574 | 244 | 23 | 0 | 4 | 247 | 1 | 244 | 1.04e-151 | 448 |
MsG0080048700.01.T01 | MTR_4g085570 | 43.946 | 223 | 99 | 3 | 141 | 341 | 277 | 495 | 2.37e-42 | 157 |
MsG0080048700.01.T01 | MTR_4g085570 | 90.574 | 244 | 23 | 0 | 4 | 247 | 1 | 244 | 1.26e-150 | 449 |
MsG0080048700.01.T01 | MTR_4g085570 | 43.946 | 223 | 99 | 3 | 141 | 341 | 277 | 495 | 2.07e-42 | 157 |
MsG0080048700.01.T01 | MTR_4g094848 | 34.572 | 269 | 128 | 4 | 4 | 238 | 1 | 255 | 1.43e-27 | 114 |
MsG0080048700.01.T01 | MTR_4g094848 | 40.559 | 143 | 85 | 0 | 96 | 238 | 1 | 143 | 2.09e-21 | 95.9 |
MsG0080048700.01.T01 | MTR_3g113290 | 34.302 | 172 | 113 | 0 | 76 | 247 | 148 | 319 | 2.33e-20 | 92.8 |
MsG0080048700.01.T01 | MTR_5g016830 | 29.683 | 347 | 168 | 10 | 4 | 280 | 1 | 341 | 6.88e-17 | 82.4 |
MsG0080048700.01.T01 | MTR_1g024095 | 28.523 | 298 | 152 | 6 | 9 | 247 | 5 | 300 | 1.99e-16 | 80.9 |
MsG0080048700.01.T01 | MTR_1g024095 | 28.808 | 302 | 146 | 8 | 9 | 247 | 5 | 300 | 2.43e-16 | 80.9 |
MsG0080048700.01.T01 | MTR_5g021810 | 31.395 | 172 | 118 | 0 | 76 | 247 | 130 | 301 | 1.27e-12 | 69.3 |
MsG0080048700.01.T01 | MTR_5g021810 | 31.395 | 172 | 118 | 0 | 76 | 247 | 129 | 300 | 1.28e-12 | 69.3 |
MsG0080048700.01.T01 | MTR_8g094760 | 32.597 | 181 | 95 | 4 | 85 | 264 | 123 | 277 | 2.05e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080048700.01.T01 | AT2G23360 | 34.340 | 265 | 141 | 4 | 4 | 247 | 1 | 253 | 1.38e-28 | 117 |
MsG0080048700.01.T01 | AT3G19370 | 36.771 | 223 | 117 | 5 | 48 | 248 | 41 | 261 | 1.21e-26 | 111 |
MsG0080048700.01.T01 | AT3G19370 | 36.771 | 223 | 117 | 5 | 48 | 248 | 41 | 261 | 1.21e-26 | 111 |
MsG0080048700.01.T01 | AT3G19370 | 36.771 | 223 | 117 | 5 | 48 | 248 | 41 | 261 | 1.21e-26 | 111 |
MsG0080048700.01.T01 | AT1G19835 | 29.054 | 296 | 152 | 7 | 4 | 247 | 1 | 290 | 1.96e-20 | 93.2 |
MsG0080048700.01.T01 | AT1G19835 | 29.054 | 296 | 152 | 7 | 4 | 247 | 1 | 290 | 1.96e-20 | 93.2 |
MsG0080048700.01.T01 | AT1G19835 | 29.054 | 296 | 152 | 7 | 4 | 247 | 1 | 290 | 1.96e-20 | 93.2 |
MsG0080048700.01.T01 | AT1G19835 | 29.054 | 296 | 152 | 7 | 4 | 247 | 1 | 290 | 1.96e-20 | 93.2 |
MsG0080048700.01.T01 | AT1G19835 | 29.054 | 296 | 152 | 7 | 4 | 247 | 1 | 290 | 1.96e-20 | 93.2 |
MsG0080048700.01.T01 | AT1G19835 | 29.054 | 296 | 152 | 7 | 4 | 247 | 1 | 290 | 1.96e-20 | 93.2 |
MsG0080048700.01.T01 | AT4G36120 | 34.591 | 159 | 104 | 0 | 89 | 247 | 142 | 300 | 1.19e-19 | 90.9 |
MsG0080048700.01.T01 | AT4G36120 | 34.591 | 159 | 104 | 0 | 89 | 247 | 142 | 300 | 1.19e-19 | 90.9 |
MsG0080048700.01.T01 | AT1G47900 | 33.557 | 149 | 84 | 1 | 114 | 247 | 192 | 340 | 2.10e-16 | 80.9 |
MsG0080048700.01.T01 | AT1G47900 | 33.557 | 149 | 84 | 1 | 114 | 247 | 192 | 340 | 2.10e-16 | 80.9 |
MsG0080048700.01.T01 | AT1G47900 | 33.557 | 149 | 84 | 1 | 114 | 247 | 192 | 340 | 2.37e-16 | 80.9 |
Find 48 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCAAAACACCAATTTGAT+TGG | 0.297987 | contig405end:+5981 | MsG0080048700.01.T01:CDS |
ACATGTGAAACTCATATCTT+AGG | 0.305333 | contig405end:-5129 | None:intergenic |
TCTTCTTCAACACAGCTTAG+AGG | 0.308629 | contig405end:-4851 | None:intergenic |
AGTTTCAGCAGACACTTCTT+TGG | 0.327000 | contig405end:-4789 | None:intergenic |
CAATCTGAAGCCAATCAAAT+TGG | 0.327825 | contig405end:-5991 | None:intergenic |
CTTCTTGTTTACATCTTACT+AGG | 0.332606 | contig405end:-5045 | None:intergenic |
GTACATGTCCTGAGCTTCTA+TGG | 0.340264 | contig405end:-5798 | None:intergenic |
CTCTCCAAAGAGGAATCTAT+TGG | 0.349267 | contig405end:+5019 | MsG0080048700.01.T01:CDS |
TGAGAAGATTCAGAAAGAAT+TGG | 0.379364 | contig405end:+4922 | MsG0080048700.01.T01:CDS |
GTCCCCAATAGATTCCTCTT+TGG | 0.385065 | contig405end:-5023 | None:intergenic |
AAGGTCAAATCTTGTTCAAT+TGG | 0.389043 | contig405end:-5920 | None:intergenic |
AGCTCAGGACATGTACTCTA+TGG | 0.392566 | contig405end:+5805 | MsG0080048700.01.T01:CDS |
TGACCTTGGTGAGACAAATC+AGG | 0.408292 | contig405end:+5936 | MsG0080048700.01.T01:CDS |
TCAGACAAGTATCCTTCTTT+CGG | 0.418317 | contig405end:-5875 | None:intergenic |
TCCTACAGATGAAACATTGC+AGG | 0.421971 | contig405end:+4817 | MsG0080048700.01.T01:CDS |
TCTCCAAAGAGGAATCTATT+GGG | 0.425490 | contig405end:+5020 | MsG0080048700.01.T01:CDS |
TTCAATGATTTGAGAAGGAC+TGG | 0.431507 | contig405end:-4452 | None:intergenic |
GTCCTCATTGATTCTCCTGT+TGG | 0.449643 | contig405end:+4743 | MsG0080048700.01.T01:CDS |
AAGATATGAGTTTCACATGT+TGG | 0.471283 | contig405end:+5132 | MsG0080048700.01.T01:CDS |
CAATAAAGCCATAGAAGCTC+AGG | 0.475405 | contig405end:+5790 | MsG0080048700.01.T01:CDS |
AAGGTTAGATTCCACAGAAA+AGG | 0.487764 | contig405end:+5096 | MsG0080048700.01.T01:CDS |
ATCACAAGCCATGGCATTGG+AGG | 0.496530 | contig405end:+4386 | MsG0080048700.01.T01:CDS |
TCTGTTAATACACCGAAAGA+AGG | 0.498028 | contig405end:+5863 | MsG0080048700.01.T01:CDS |
CTTTCAACAGATAAGGAAAG+TGG | 0.514488 | contig405end:+4677 | MsG0080048700.01.T01:CDS |
GAGAAGTCTAAACGAGAAGT+TGG | 0.518791 | contig405end:+4715 | MsG0080048700.01.T01:CDS |
GGATACTTGTCTGATGTAAG+TGG | 0.524220 | contig405end:+5884 | MsG0080048700.01.T01:CDS |
TGAATCACAAGCCATGGCAT+TGG | 0.526460 | contig405end:+4383 | MsG0080048700.01.T01:CDS |
TCCTGCAATGTTTCATCTGT+AGG | 0.538907 | contig405end:-4818 | None:intergenic |
ACACGATCTTTCAACAGATA+AGG | 0.544615 | contig405end:+4670 | MsG0080048700.01.T01:CDS |
TAATGCTTTGCTCTCCAAAG+AGG | 0.568551 | contig405end:+5009 | MsG0080048700.01.T01:CDS |
GATACTTGTCTGATGTAAGT+GGG | 0.571105 | contig405end:+5885 | MsG0080048700.01.T01:CDS |
AAATCATGAATCACAAGCCA+TGG | 0.580266 | contig405end:+4377 | MsG0080048700.01.T01:CDS |
ACACAGCTTAGAGGCTGCAA+AGG | 0.587987 | contig405end:-4842 | None:intergenic |
TGGTGAGACAAATCAGGAGA+TGG | 0.590809 | contig405end:+5942 | MsG0080048700.01.T01:CDS |
TGAGATACGAAAGGAGGAGA+TGG | 0.598393 | contig405end:+5165 | MsG0080048700.01.T01:CDS |
AATTGAACAAGATTTGACCT+TGG | 0.621228 | contig405end:+5922 | MsG0080048700.01.T01:CDS |
CTCCAAAGAGGAATCTATTG+GGG | 0.623459 | contig405end:+5021 | MsG0080048700.01.T01:CDS |
AGTTTAAGACTCTGATGACA+AGG | 0.628274 | contig405end:+5077 | MsG0080048700.01.T01:CDS |
CTTGTCTGATGTAAGTGGGA+GGG | 0.633717 | contig405end:+5889 | MsG0080048700.01.T01:CDS |
GAAGAAACTTGAGATACGAA+AGG | 0.635194 | contig405end:+5156 | MsG0080048700.01.T01:CDS |
GTGATGCATCTGCATACTGA+CGG | 0.648407 | contig405end:-5195 | None:intergenic |
ACTTGTCTGATGTAAGTGGG+AGG | 0.659831 | contig405end:+5888 | MsG0080048700.01.T01:CDS |
GAAACTTGAGATACGAAAGG+AGG | 0.660649 | contig405end:+5159 | MsG0080048700.01.T01:CDS |
CTCCAACAGGAGAATCAATG+AGG | 0.661990 | contig405end:-4745 | None:intergenic |
ATATTTGGAATGATAACGCA+CGG | 0.662032 | contig405end:-4887 | None:intergenic |
TATGCGTTTCTCCTTCAACA+TGG | 0.665654 | contig405end:-6023 | None:intergenic |
TCTCCTGATTTGTCTCACCA+AGG | 0.680783 | contig405end:-5939 | None:intergenic |
GAGACGGAGTCTCTGACACT+CGG | 0.705895 | contig405end:-5263 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTTTACAAAAATAATGATGT+TGG | + | contig405end:5404-5423 | MsG0080048700.01.T01:intron | 20.0% |
!!! | TCATGATCTTTTGATATATT+TGG | - | contig405end:4905-4924 | None:intergenic | 20.0% |
! | AAAGAAGCTAAATCCTAATA+GGG | + | contig405end:5376-5395 | MsG0080048700.01.T01:intron | 25.0% |
! | AATCAAAACACCAATTTGAT+TGG | + | contig405end:5981-6000 | MsG0080048700.01.T01:CDS | 25.0% |
! | ATGTCAAAATTTGACATTGA+AGG | - | contig405end:5672-5691 | None:intergenic | 25.0% |
! | CAAAACTTAGAAGAGAATAA+TGG | - | contig405end:4550-4569 | None:intergenic | 25.0% |
! | CTAACAATACTACATTTATC+AGG | + | contig405end:4646-4665 | MsG0080048700.01.T01:intron | 25.0% |
! | GATTCTTCAAGATTTATGTA+TGG | + | contig405end:5540-5559 | MsG0080048700.01.T01:intron | 25.0% |
! | TTCTCAAATCATTGAAAAAG+AGG | + | contig405end:4459-4478 | MsG0080048700.01.T01:CDS | 25.0% |
!!! | TCTTTTTCAATGATTTGAGA+AGG | - | contig405end:4460-4479 | None:intergenic | 25.0% |
AAGATATGAGTTTCACATGT+TGG | + | contig405end:5132-5151 | MsG0080048700.01.T01:CDS | 30.0% | |
AAGGTCAAATCTTGTTCAAT+TGG | - | contig405end:5923-5942 | None:intergenic | 30.0% | |
AATTGAACAAGATTTGACCT+TGG | + | contig405end:5922-5941 | MsG0080048700.01.T01:CDS | 30.0% | |
ACATGTGAAACTCATATCTT+AGG | - | contig405end:5132-5151 | None:intergenic | 30.0% | |
ACTTGAACATTTACGTGTTT+CGG | + | contig405end:5748-5767 | MsG0080048700.01.T01:intron | 30.0% | |
ATAATGGCTCAATATGTTTC+TGG | - | contig405end:4534-4553 | None:intergenic | 30.0% | |
CGTGATTCAAAAAAGATATC+TGG | + | contig405end:5285-5304 | MsG0080048700.01.T01:CDS | 30.0% | |
GAAAGAAGCTAAATCCTAAT+AGG | + | contig405end:5375-5394 | MsG0080048700.01.T01:intron | 30.0% | |
GATCAAACATATACAGGATA+GGG | + | contig405end:5465-5484 | MsG0080048700.01.T01:intron | 30.0% | |
GTGAATAGGAAGAATGAAAT+TGG | + | contig405end:5320-5339 | MsG0080048700.01.T01:intron | 30.0% | |
TGAGAAGATTCAGAAAGAAT+TGG | + | contig405end:4922-4941 | MsG0080048700.01.T01:CDS | 30.0% | |
TGATCAAACATATACAGGAT+AGG | + | contig405end:5464-5483 | MsG0080048700.01.T01:intron | 30.0% | |
! | ATATTTGGAATGATAACGCA+CGG | - | contig405end:4890-4909 | None:intergenic | 30.0% |
! | ATTTTGTTGAGATGGAGAAA+AGG | + | contig405end:5831-5850 | MsG0080048700.01.T01:CDS | 30.0% |
! | CTTCTTGTTTACATCTTACT+AGG | - | contig405end:5048-5067 | None:intergenic | 30.0% |
! | CTTGATGATCAAACATATAC+AGG | + | contig405end:5459-5478 | MsG0080048700.01.T01:intron | 30.0% |
! | TATGGATGATTTTGTTGAGA+TGG | + | contig405end:5823-5842 | MsG0080048700.01.T01:CDS | 30.0% |
! | TTCTGAAAATTACAAGTCCA+TGG | + | contig405end:5611-5630 | MsG0080048700.01.T01:intron | 30.0% |
! | TTTTGTTGAGATGGAGAAAA+GGG | + | contig405end:5832-5851 | MsG0080048700.01.T01:CDS | 30.0% |
!!! | ATCTTTTTTGAATCACGAGA+CGG | - | contig405end:5282-5301 | None:intergenic | 30.0% |
AAATCATGAATCACAAGCCA+TGG | + | contig405end:4377-4396 | MsG0080048700.01.T01:CDS | 35.0% | |
AAGGTTAGATTCCACAGAAA+AGG | + | contig405end:5096-5115 | MsG0080048700.01.T01:CDS | 35.0% | |
ACACGATCTTTCAACAGATA+AGG | + | contig405end:4670-4689 | MsG0080048700.01.T01:CDS | 35.0% | |
AGAATGAAATTGGTGAACAG+AGG | + | contig405end:5330-5349 | MsG0080048700.01.T01:intron | 35.0% | |
CTTTCAACAGATAAGGAAAG+TGG | + | contig405end:4677-4696 | MsG0080048700.01.T01:CDS | 35.0% | |
GAAGAAACTTGAGATACGAA+AGG | + | contig405end:5156-5175 | MsG0080048700.01.T01:CDS | 35.0% | |
GAAGGAAGTTCATTTGATGT+AGG | - | contig405end:5654-5673 | None:intergenic | 35.0% | |
GATACTTGTCTGATGTAAGT+GGG | + | contig405end:5885-5904 | MsG0080048700.01.T01:CDS | 35.0% | |
TCAGACAAGTATCCTTCTTT+CGG | - | contig405end:5878-5897 | None:intergenic | 35.0% | |
TCTCCAAAGAGGAATCTATT+GGG | + | contig405end:5020-5039 | MsG0080048700.01.T01:CDS | 35.0% | |
TCTGTTAATACACCGAAAGA+AGG | + | contig405end:5863-5882 | MsG0080048700.01.T01:CDS | 35.0% | |
TTCAATGATTTGAGAAGGAC+TGG | - | contig405end:4455-4474 | None:intergenic | 35.0% | |
TTGTAAAGCATGTCCCTATT+AGG | - | contig405end:5392-5411 | None:intergenic | 35.0% | |
! | AGTTTAAGACTCTGATGACA+AGG | + | contig405end:5077-5096 | MsG0080048700.01.T01:CDS | 35.0% |
! | CAATCTGAAGCCAATCAAAT+TGG | - | contig405end:5994-6013 | None:intergenic | 35.0% |
! | TCATCAGATTTTACTCCAAC+AGG | - | contig405end:4761-4780 | None:intergenic | 35.0% |
!! | AAAAAGATATCTGGTCTTGC+AGG | + | contig405end:5294-5313 | MsG0080048700.01.T01:CDS | 35.0% |
!! | CTAGTGAATTCAGCTCTAAA+AGG | - | contig405end:4599-4618 | None:intergenic | 35.0% |
!! | TGACATTTCTAGTGATGATG+AGG | + | contig405end:5686-5705 | MsG0080048700.01.T01:intron | 35.0% |
!! | TGTTTTGAATGCCATGTTGA+AGG | + | contig405end:6012-6031 | MsG0080048700.01.T01:CDS | 35.0% |
ACATATACAGGATAGGGATG+AGG | + | contig405end:5471-5490 | MsG0080048700.01.T01:intron | 40.0% | |
AGTTTCAGCAGACACTTCTT+TGG | - | contig405end:4792-4811 | None:intergenic | 40.0% | |
CAATAAAGCCATAGAAGCTC+AGG | + | contig405end:5790-5809 | MsG0080048700.01.T01:CDS | 40.0% | |
CTCCAAAGAGGAATCTATTG+GGG | + | contig405end:5021-5040 | MsG0080048700.01.T01:CDS | 40.0% | |
CTCTCCAAAGAGGAATCTAT+TGG | + | contig405end:5019-5038 | MsG0080048700.01.T01:CDS | 40.0% | |
GAAACTTGAGATACGAAAGG+AGG | + | contig405end:5159-5178 | MsG0080048700.01.T01:CDS | 40.0% | |
GAGAAGTCTAAACGAGAAGT+TGG | + | contig405end:4715-4734 | MsG0080048700.01.T01:CDS | 40.0% | |
GGATACTTGTCTGATGTAAG+TGG | + | contig405end:5884-5903 | MsG0080048700.01.T01:CDS | 40.0% | |
TAATGCTTTGCTCTCCAAAG+AGG | + | contig405end:5009-5028 | MsG0080048700.01.T01:CDS | 40.0% | |
TATGCGTTTCTCCTTCAACA+TGG | - | contig405end:6026-6045 | None:intergenic | 40.0% | |
TCCTACAGATGAAACATTGC+AGG | + | contig405end:4817-4836 | MsG0080048700.01.T01:CDS | 40.0% | |
TCCTGCAATGTTTCATCTGT+AGG | - | contig405end:4821-4840 | None:intergenic | 40.0% | |
TCTTCTTCAACACAGCTTAG+AGG | - | contig405end:4854-4873 | None:intergenic | 40.0% | |
TGAACATTTACGTGTTTCGG+AGG | + | contig405end:5751-5770 | MsG0080048700.01.T01:intron | 40.0% | |
TGTTTCGGAGGCTAAAATTC+AGG | + | contig405end:5763-5782 | MsG0080048700.01.T01:intron | 40.0% | |
! | CTGGGCAAATGCTCTTATTT+CGG | + | contig405end:5724-5743 | MsG0080048700.01.T01:intron | 40.0% |
! | GAATGCAATCTCCTTTTCTG+TGG | - | contig405end:5110-5129 | None:intergenic | 40.0% |
!!! | GATTTTTTCCTCCAATGCCA+TGG | - | contig405end:4397-4416 | None:intergenic | 40.0% |
ACTTGTCTGATGTAAGTGGG+AGG | + | contig405end:5888-5907 | MsG0080048700.01.T01:CDS | 45.0% | |
AGCTCAGGACATGTACTCTA+TGG | + | contig405end:5805-5824 | MsG0080048700.01.T01:CDS | 45.0% | |
AGGCTATCTCTTCTGATCCT+GGG | + | contig405end:5706-5725 | MsG0080048700.01.T01:intron | 45.0% | |
ATAACACCTTGCTAGCTCCA+TGG | - | contig405end:5631-5650 | None:intergenic | 45.0% | |
CATCAAGCCGATACTCTTCT+GGG | - | contig405end:5446-5465 | None:intergenic | 45.0% | |
CTCCAACAGGAGAATCAATG+AGG | - | contig405end:4748-4767 | None:intergenic | 45.0% | |
CTTGTCTGATGTAAGTGGGA+GGG | + | contig405end:5889-5908 | MsG0080048700.01.T01:CDS | 45.0% | |
GAACAGAGGTGAAAAGAGAC+AGG | + | contig405end:5344-5363 | MsG0080048700.01.T01:intron | 45.0% | |
GAGGTGAAAAGAGACAGGTA+TGG | + | contig405end:5349-5368 | MsG0080048700.01.T01:intron | 45.0% | |
GTACATGTCCTGAGCTTCTA+TGG | - | contig405end:5801-5820 | None:intergenic | 45.0% | |
GTCCCCAATAGATTCCTCTT+TGG | - | contig405end:5026-5045 | None:intergenic | 45.0% | |
GTGATGCATCTGCATACTGA+CGG | - | contig405end:5198-5217 | None:intergenic | 45.0% | |
TCATCAAGCCGATACTCTTC+TGG | - | contig405end:5447-5466 | None:intergenic | 45.0% | |
TGAATCACAAGCCATGGCAT+TGG | + | contig405end:4383-4402 | MsG0080048700.01.T01:CDS | 45.0% | |
TGACCTTGGTGAGACAAATC+AGG | + | contig405end:5936-5955 | MsG0080048700.01.T01:CDS | 45.0% | |
TGAGATACGAAAGGAGGAGA+TGG | + | contig405end:5165-5184 | MsG0080048700.01.T01:CDS | 45.0% | |
TGGTGAGACAAATCAGGAGA+TGG | + | contig405end:5942-5961 | MsG0080048700.01.T01:CDS | 45.0% | |
TGTATGGTGAAACAGCATCC+AGG | + | contig405end:5556-5575 | MsG0080048700.01.T01:intron | 45.0% | |
! | CGAGTATCCCAGAAGAGTAT+CGG | + | contig405end:5436-5455 | MsG0080048700.01.T01:intron | 45.0% |
! | TCTCCTGATTTGTCTCACCA+AGG | - | contig405end:5942-5961 | None:intergenic | 45.0% |
!! | CGAAATAAGAGCATTTGCCC+AGG | - | contig405end:5726-5745 | None:intergenic | 45.0% |
!! | CGATACTCTTCTGGGATACT+CGG | - | contig405end:5438-5457 | None:intergenic | 45.0% |
!! | GTCCTCATTGATTCTCCTGT+TGG | + | contig405end:4743-4762 | MsG0080048700.01.T01:CDS | 45.0% |
AACAGCATCCAGGTTGTCAC+AGG | + | contig405end:5566-5585 | MsG0080048700.01.T01:intron | 50.0% | |
AATCTCAGCCTGTGACAACC+TGG | - | contig405end:5577-5596 | None:intergenic | 50.0% | |
ACAAGTCCATGGAGCTAGCA+AGG | + | contig405end:5622-5641 | MsG0080048700.01.T01:intron | 50.0% | |
ACACAGCTTAGAGGCTGCAA+AGG | - | contig405end:4845-4864 | None:intergenic | 50.0% | |
GAGGCTATCTCTTCTGATCC+TGG | + | contig405end:5705-5724 | MsG0080048700.01.T01:intron | 50.0% | |
GGTCTTGCAGGTCAGTGAAT+AGG | + | contig405end:5306-5325 | MsG0080048700.01.T01:intron | 50.0% | |
! | ATCACAAGCCATGGCATTGG+AGG | + | contig405end:4386-4405 | MsG0080048700.01.T01:CDS | 50.0% |
GAGACGGAGTCTCTGACACT+CGG | - | contig405end:5266-5285 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
contig405end | gene | 4373 | 6066 | 4373 | ID=MsG0080048700.01;Name=MsG0080048700.01 |
contig405end | mRNA | 4373 | 6066 | 4373 | ID=MsG0080048700.01.T01;Parent=MsG0080048700.01;Name=MsG0080048700.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0.5|0.66|3|0|345 |
contig405end | exon | 4373 | 4480 | 4373 | ID=MsG0080048700.01.T01:exon:3502;Parent=MsG0080048700.01.T01 |
contig405end | exon | 4668 | 5315 | 4668 | ID=MsG0080048700.01.T01:exon:3503;Parent=MsG0080048700.01.T01 |
contig405end | exon | 5785 | 6066 | 5785 | ID=MsG0080048700.01.T01:exon:3504;Parent=MsG0080048700.01.T01 |
contig405end | CDS | 4373 | 4480 | 4373 | ID=MsG0080048700.01.T01:cds;Parent=MsG0080048700.01.T01 |
contig405end | CDS | 4668 | 5315 | 4668 | ID=MsG0080048700.01.T01:cds;Parent=MsG0080048700.01.T01 |
contig405end | CDS | 5785 | 6066 | 5785 | ID=MsG0080048700.01.T01:cds;Parent=MsG0080048700.01.T01 |
Gene Sequence |
Protein sequence |