AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019889.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019889.01.T01 MTR_0512s0010 98.701 77 1 0 353 429 1 77 3.70e-47 157
MsG0480019889.01.T01 MTR_4g101060 90.323 62 6 0 364 425 12 73 4.02e-33 120
MsG0480019889.01.T01 MTR_1g064650 36.257 171 57 3 175 325 185 323 2.77e-20 91.7
MsG0480019889.01.T01 MTR_5g095460 52.308 65 31 0 154 218 4 68 2.56e-18 80.5
MsG0480019889.01.T01 MTR_0251s0060 31.472 197 78 6 141 327 202 351 2.36e-17 83.6
MsG0480019889.01.T01 MTR_0018s0300 33.679 193 55 5 105 297 129 248 1.21e-16 80.1
MsG0480019889.01.T01 MTR_2g094423 68.889 45 14 0 136 180 152 196 1.82e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019889.01.T01 AT3G52040 60.674 89 35 0 353 441 1 89 4.05e-30 112

Find 146 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGGACAATCCCCTTTAT+TGG 0.169398 4:+29002668 None:intergenic
TTATAAATTGATCCTGAAAT+TGG 0.188803 4:-29002647 MsG0480019889.01.T01:three_prime_UTR
CAGAGGTGGTATTGCCTTCT+TGG 0.203819 4:-29009150 MsG0480019889.01.T01:CDS
CTCCTCAAACACGGTATAAT+TGG 0.216844 4:+29008813 None:intergenic
TTAAAACAAGTGCCAATTTC+AGG 0.223013 4:+29002635 None:intergenic
GCACCAATTCGGTTTAATAT+TGG 0.269788 4:-29011110 MsG0480019889.01.T01:CDS
ATGGAGGATATTTCCAATAA+AGG 0.275449 4:-29002681 MsG0480019889.01.T01:three_prime_UTR
CAGTTTGTTGGAGATGGTTC+AGG 0.288380 4:-29011265 MsG0480019889.01.T01:CDS
TGGAGGATATTTCCAATAAA+GGG 0.301615 4:-29002680 MsG0480019889.01.T01:three_prime_UTR
ATTTCAGGATCAATTTATAA+AGG 0.302383 4:+29002650 None:intergenic
AACGAAAGTTACAAAGGATA+TGG 0.347960 4:-29006267 MsG0480019889.01.T01:CDS
GAATCGATTTCTTCTTAGTT+TGG 0.349646 4:+29006429 None:intergenic
TGCCATGTTGCGGATGCTAT+TGG 0.357956 4:+29011405 None:intergenic
TCGGTTTAACACTTTAATAT+TGG 0.359906 4:-29011063 MsG0480019889.01.T01:CDS
AAACTGACAGGTTATATAAT+AGG 0.360225 4:-29007830 MsG0480019889.01.T01:intron
CTTGCCCGGAGCGGGTTCTA+AGG 0.365488 4:-29009233 MsG0480019889.01.T01:CDS
TTTCAGGATCAATTTATAAA+GGG 0.380126 4:+29002651 None:intergenic
TGGAGCATTCTCATGTCATT+TGG 0.383323 4:-29009351 MsG0480019889.01.T01:CDS
AGCCTTATGAAGATTATGAT+TGG 0.405848 4:-29009445 MsG0480019889.01.T01:CDS
TGGATGGGTCGGAGGATGTC+TGG 0.406630 4:+29008934 None:intergenic
TGGCTCCACGGAGGAGGAGT+AGG 0.409955 4:-29008786 MsG0480019889.01.T01:CDS
CGGAGGAGGAGTAGGGGTCC+AGG 0.411308 4:-29008778 MsG0480019889.01.T01:CDS
AATTTACCTTTGCGAGTTTG+AGG 0.415610 4:+29006383 None:intergenic
GAGGAGGAGTAGGGGTCCAG+GGG 0.415895 4:-29008776 MsG0480019889.01.T01:CDS
GAACCAATATTAAACCGAAT+TGG 0.420964 4:+29011107 None:intergenic
GGCTCCACGGAGGAGGAGTA+GGG 0.426169 4:-29008785 MsG0480019889.01.T01:CDS
GAGAAGAAGAAGGAGGTTGT+TGG 0.429787 4:-29011365 MsG0480019889.01.T01:CDS
TTCGGTTCAGTTTAGCAGTT+CGG 0.432066 4:-29011087 MsG0480019889.01.T01:CDS
CTCTGATGTTGCCGATGACC+TGG 0.433944 4:+29008914 None:intergenic
AGGACCCGTATGTGGGTAGA+TGG 0.435914 4:-29009421 MsG0480019889.01.T01:CDS
GGAGGAGGAGTAGGGGTCCA+GGG 0.440306 4:-29008777 MsG0480019889.01.T01:CDS
AATTCGGTTTAATATTGGTT+CGG 0.440891 4:-29011105 MsG0480019889.01.T01:CDS
ATACACCATCCTAGCTTTGC+CGG 0.445356 4:+29009258 None:intergenic
GCCTTATGAAGATTATGATT+GGG 0.449971 4:-29009444 MsG0480019889.01.T01:CDS
GTAATAAATAACACTACAAA+TGG 0.450038 4:+29002780 None:intergenic
TTAACACTTTAATATTGGTT+CGG 0.452083 4:-29011058 MsG0480019889.01.T01:intron
GTGTATCACTTGCCCGGAGC+GGG 0.453561 4:-29009241 MsG0480019889.01.T01:CDS
AAAACGCTTATGCACCAATT+CGG 0.456337 4:-29011121 MsG0480019889.01.T01:CDS
ATATCCTTTGTAACTTTCGT+TGG 0.460250 4:+29006269 None:intergenic
CAGGACGTATGCTGGTACTC+CGG 0.462688 4:-29009292 MsG0480019889.01.T01:CDS
TCAATCATAGTAGGAGGTCT+AGG 0.467356 4:+29009187 None:intergenic
TCAAGAGGCTCAATCATAGT+AGG 0.467904 4:+29009178 None:intergenic
TCCCAATCATAATCTTCATA+AGG 0.468656 4:+29009443 None:intergenic
GCATCTCAGTTTGTTGGAGA+TGG 0.469797 4:-29011271 MsG0480019889.01.T01:CDS
AGTCGATTTAAAACCACATC+AGG 0.471385 4:+29008865 None:intergenic
GGAGGTTGTTGGTTGGTGAC+TGG 0.474981 4:-29011354 MsG0480019889.01.T01:CDS
AGGAATGCATCTCAGTTTGT+TGG 0.476798 4:-29011277 MsG0480019889.01.T01:CDS
GTCCAATTATACCGTGTTTG+AGG 0.477768 4:-29008815 MsG0480019889.01.T01:CDS
TCTGCACCACTTGCAGACTC+TGG 0.478306 4:+29002938 None:intergenic
GTGTACTTAGGAACGGGAGC+AGG 0.480316 4:+29009003 None:intergenic
TACCGTGTTTGAGGAGGTGC+TGG 0.481870 4:-29008806 MsG0480019889.01.T01:CDS
GGAGCAGGGCCGATCATAAG+AGG 0.489788 4:+29009018 None:intergenic
AGGTGCTGGCTCCACGGAGG+AGG 0.490596 4:-29008792 MsG0480019889.01.T01:CDS
CTGGTACTCCGGATGGATCA+TGG 0.493925 4:-29009281 MsG0480019889.01.T01:CDS
ACAATAACCTCTTCGTAGAC+AGG 0.500042 4:+29008971 None:intergenic
CTGCTTTAACTTCATTGCAA+TGG 0.502414 4:+29003010 None:intergenic
AGAAGAAGGAGGTTGTTGGT+TGG 0.505342 4:-29011361 MsG0480019889.01.T01:CDS
ACTGCCTTAGAACCCGCTCC+GGG 0.506010 4:+29009229 None:intergenic
AGACATCCTCCGACCCATCC+AGG 0.507753 4:-29008932 MsG0480019889.01.T01:CDS
GACTGCCTTAGAACCCGCTC+CGG 0.508035 4:+29009228 None:intergenic
GATGTTGCCGATGACCTGGA+TGG 0.508442 4:+29008918 None:intergenic
TTCAGTTTAGCAGTTCGGTT+CGG 0.509478 4:-29011082 MsG0480019889.01.T01:CDS
AACCTCTTCGTAGACAGGTT+GGG 0.510197 4:+29008976 None:intergenic
GGAACTGTGTACTTAGGAAC+GGG 0.510496 4:+29008997 None:intergenic
GTATGCCATCCTCTTATGAT+CGG 0.511078 4:-29009027 MsG0480019889.01.T01:CDS
TACCAGCATACGTCCTGAAA+AGG 0.514184 4:+29009298 None:intergenic
AATGGAAAGGTAAATAATGA+AGG 0.514505 4:+29002798 None:intergenic
TAGCTAGAATGAGAAGAAGA+AGG 0.520337 4:-29011375 MsG0480019889.01.T01:CDS
GGATCATGGCCGGCAAAGCT+AGG 0.520836 4:-29009267 MsG0480019889.01.T01:CDS
TAATCTTCATAAGGCTTCCT+CGG 0.522422 4:+29009452 None:intergenic
TGATTGGGAGGACCCGTATG+TGG 0.522904 4:-29009429 MsG0480019889.01.T01:CDS
TGTTGGTTGGTGACTGGAGA+TGG 0.523389 4:-29011348 MsG0480019889.01.T01:CDS
AATAGCATCCGCAACATGGC+AGG 0.526516 4:-29011403 MsG0480019889.01.T01:CDS
GGTTATTGTTGAGCAGCAGC+GGG 0.526739 4:-29008957 MsG0480019889.01.T01:CDS
GCCTCTTGAGCTAGCAGAGG+TGG 0.528477 4:-29009164 MsG0480019889.01.T01:CDS
ATAAGACCCTGCTACTCCCC+TGG 0.528663 4:+29008760 None:intergenic
ACTTTGCCATGACGATTAGC+AGG 0.529511 4:+29006407 None:intergenic
GCTCAGATCGGTGACGAAGA+TGG 0.533295 4:-29011314 MsG0480019889.01.T01:CDS
AGTGTCTAACATCAGCTAGA+AGG 0.534078 4:+29009395 None:intergenic
TAACCTCTTCGTAGACAGGT+TGG 0.536816 4:+29008975 None:intergenic
CATGGCCGGCAAAGCTAGGA+TGG 0.542964 4:-29009263 MsG0480019889.01.T01:CDS
CTCCGACCCATCCAGGTCAT+CGG 0.547187 4:-29008925 MsG0480019889.01.T01:CDS
AGCATTCTCATGTCATTTGG+AGG 0.548695 4:-29009348 MsG0480019889.01.T01:CDS
TTGAGGAGGTGCTGGCTCCA+CGG 0.553853 4:-29008798 MsG0480019889.01.T01:CDS
ACCACCTCTGCTAGCTCAAG+AGG 0.557977 4:+29009163 None:intergenic
AGGTTATTGTTGAGCAGCAG+CGG 0.560260 4:-29008958 MsG0480019889.01.T01:CDS
AGGATGGTGTATCACTTGCC+CGG 0.562160 4:-29009247 MsG0480019889.01.T01:CDS
GGTTTCCATCTACCCACATA+CGG 0.567928 4:+29009416 None:intergenic
AGATGGTTCGATCGCGACAA+AGG 0.569555 4:-29011297 MsG0480019889.01.T01:CDS
CTATACCTCCTGCCATGTTG+CGG 0.575793 4:+29011395 None:intergenic
AGGTTGGGAACTGTGTACTT+AGG 0.578216 4:+29008991 None:intergenic
TTTGCCGGCCATGATCCATC+CGG 0.579534 4:+29009273 None:intergenic
CAATTATACCGTGTTTGAGG+AGG 0.580095 4:-29008812 MsG0480019889.01.T01:CDS
GCTCCACGGAGGAGGAGTAG+GGG 0.580880 4:-29008784 MsG0480019889.01.T01:CDS
TACTCCGGATGGATCATGGC+CGG 0.581324 4:-29009277 MsG0480019889.01.T01:CDS
GGAGGATATTTCCAATAAAG+GGG 0.583221 4:-29002679 MsG0480019889.01.T01:three_prime_UTR
CATTCAGTGAGGTAGATGAA+TGG 0.585544 4:-29009059 MsG0480019889.01.T01:CDS
TCGATTCCTGCTAATCGTCA+TGG 0.587351 4:-29006413 MsG0480019889.01.T01:CDS
CAAACACGGTATAATTGGAC+CGG 0.589854 4:+29008818 None:intergenic
ATGTTAGACACTTCAGACTC+GGG 0.592642 4:-29009384 MsG0480019889.01.T01:CDS
CTAGAATGAGAAGAAGAAGG+AGG 0.593451 4:-29011372 MsG0480019889.01.T01:CDS
ACGTATGCTGGTACTCCGGA+TGG 0.594537 4:-29009288 MsG0480019889.01.T01:CDS
GTTTCCATCTACCCACATAC+GGG 0.596759 4:+29009417 None:intergenic
GATGTTAGACACTTCAGACT+CGG 0.597734 4:-29009385 MsG0480019889.01.T01:CDS
GTCGATCATGCGGCTCAGAT+CGG 0.598558 4:-29011326 MsG0480019889.01.T01:CDS
AAATAACACTACAAATGGAA+AGG 0.600687 4:+29002785 None:intergenic
GGGAACTGTGTACTTAGGAA+CGG 0.601082 4:+29008996 None:intergenic
CAGACTCGGGATGGAATCGA+TGG 0.601135 4:-29009371 MsG0480019889.01.T01:CDS
ACTGGAGATGGTCGATCATG+CGG 0.601402 4:-29011336 MsG0480019889.01.T01:CDS
CGATGACCTGGATGGGTCGG+AGG 0.607164 4:+29008926 None:intergenic
TGTACTTAGGAACGGGAGCA+GGG 0.612954 4:+29009004 None:intergenic
CAGGGCCGATCATAAGAGGA+TGG 0.614676 4:+29009022 None:intergenic
TGCCGATGACCTGGATGGGT+CGG 0.615434 4:+29008923 None:intergenic
GGAGCGGGTTCTAAGGCAGT+CGG 0.617175 4:-29009226 MsG0480019889.01.T01:CDS
ATCTAAATGACATAAAACAA+GGG 0.617914 4:+29002606 None:intergenic
AAAGTACCTCAAACTCGCAA+AGG 0.619602 4:-29006389 MsG0480019889.01.T01:intron
GCGACTGTAGCTACAAAGGA+CGG 0.622949 4:-29002988 MsG0480019889.01.T01:CDS
TAGACACTTCAGACTCGGGA+TGG 0.623523 4:-29009380 MsG0480019889.01.T01:CDS
GATTGGGAGGACCCGTATGT+GGG 0.623526 4:-29009428 MsG0480019889.01.T01:CDS
TTCCAATAGCATCCGCAACA+TGG 0.625417 4:-29011407 MsG0480019889.01.T01:CDS
TTATGAAGATTATGATTGGG+AGG 0.626340 4:-29009441 MsG0480019889.01.T01:CDS
TCATAAGAGGATGGCATACA+CGG 0.626570 4:+29009031 None:intergenic
AGAGGCTCAATCATAGTAGG+AGG 0.627789 4:+29009181 None:intergenic
TGCAATGTGGATTCCTGATG+TGG 0.629113 4:-29008878 MsG0480019889.01.T01:CDS
GGTGTATCACTTGCCCGGAG+CGG 0.632424 4:-29009242 MsG0480019889.01.T01:CDS
ATGGAGAGCGAACTCCAAGA+AGG 0.632962 4:+29009136 None:intergenic
ATGTTGCCGATGACCTGGAT+GGG 0.634037 4:+29008919 None:intergenic
GAAAAGGTGTCACGTCTCGT+CGG 0.635161 4:+29009314 None:intergenic
CATAGTAGGAGGTCTAGGAA+TGG 0.635657 4:+29009192 None:intergenic
AGATGGTTCAGGTTGTGCGA+TGG 0.636042 4:-29011254 MsG0480019889.01.T01:CDS
AATCTAAATGACATAAAACA+AGG 0.637664 4:+29002605 None:intergenic
TTCCCAACCTGTCTACGAAG+AGG 0.637890 4:-29008978 MsG0480019889.01.T01:CDS
AGCATCCGCAACATGGCAGG+AGG 0.641182 4:-29011400 MsG0480019889.01.T01:CDS
AGCCAGCACCTCCTCAAACA+CGG 0.643302 4:+29008804 None:intergenic
AGCAGCGACTGTAGCTACAA+AGG 0.651640 4:-29002992 MsG0480019889.01.T01:CDS
ACATCAGACAGCTCATTCCG+AGG 0.654529 4:-29009469 MsG0480019889.01.T01:CDS
CGGCAACATCAGAGTCAGAG+TGG 0.656994 4:-29008905 MsG0480019889.01.T01:CDS
ACAGCACCAGAGTCTGCAAG+TGG 0.658489 4:-29002944 MsG0480019889.01.T01:CDS
GGACCCCTACTCCTCCTCCG+TGG 0.659119 4:+29008781 None:intergenic
TGAGCCTCTTGAGCTAGCAG+AGG 0.665849 4:-29009167 MsG0480019889.01.T01:CDS
GAAGCCAACGAAAGTTACAA+AGG 0.673022 4:-29006273 MsG0480019889.01.T01:CDS
AGGAGGTGCTGGCTCCACGG+AGG 0.701717 4:-29008795 MsG0480019889.01.T01:CDS
TCAGAGTGGAGAATGCAATG+TGG 0.710526 4:-29008891 MsG0480019889.01.T01:CDS
ATGTTGCGGATGCTATTGGA+AGG 0.732588 4:+29011409 None:intergenic
AGGAGTGGATGCATTCAGTG+AGG 0.743135 4:-29009070 MsG0480019889.01.T01:CDS
ACTGTAGCTACAAAGGACGG+TGG 0.767361 4:-29002985 MsG0480019889.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAATTTTTTTATATTT+GGG - Chr4:29010972-29010991 MsG0480019889.01.T01:intron 0.0%
!! AATACTAATTATAGAAAAAT+AGG - Chr4:29008691-29008710 MsG0480019889.01.T01:intron 10.0%
!! GAAATAAAAAAATTAGAATT+AGG + Chr4:29007550-29007569 None:intergenic 10.0%
!! TATAAAAAATGAAATGTAAA+AGG - Chr4:29007280-29007299 MsG0480019889.01.T01:intron 10.0%
!! TTTCAACAAAAAAAAATTAA+TGG + Chr4:29007693-29007712 None:intergenic 10.0%
!!! ATAATTATCTAATTTGAAAT+TGG - Chr4:29008463-29008482 MsG0480019889.01.T01:intron 10.0%
!! AAATAAGATGAATAATAAGA+AGG + Chr4:29007451-29007470 None:intergenic 15.0%
!! AACTTTATTCTCTTAAAATT+TGG + Chr4:29009619-29009638 None:intergenic 15.0%
!! AATAAGATGAATAATAAGAA+GGG + Chr4:29007450-29007469 None:intergenic 15.0%
!! AATTAAAATACGAAGAATAA+AGG + Chr4:29005420-29005439 None:intergenic 15.0%
!! AGAATAAAGAGTTAATTTAA+TGG + Chr4:29009216-29009235 None:intergenic 15.0%
!! ATTGATCAATAAGAAATTAA+TGG - Chr4:29007045-29007064 MsG0480019889.01.T01:intron 15.0%
!! TATTATTTATAAGCATGTAA+AGG + Chr4:29008086-29008105 None:intergenic 15.0%
!! TTGGAATATTGATAAAAATA+TGG + Chr4:29003265-29003284 None:intergenic 15.0%
!!! AAATTGTAAACTTTTTTTAC+AGG - Chr4:29007737-29007756 MsG0480019889.01.T01:intron 15.0%
!!! AATATTGCATTTTTGAATTA+TGG - Chr4:29011345-29011364 MsG0480019889.01.T01:CDS 15.0%
!!! AATTGTAAACTTTTTTTACA+GGG - Chr4:29007738-29007757 MsG0480019889.01.T01:intron 15.0%
!!! ACTATATTGTTTTATTATCT+AGG + Chr4:29009817-29009836 None:intergenic 15.0%
!!! ATTTGTTGAGTTTTTTTTTT+AGG - Chr4:29004126-29004145 MsG0480019889.01.T01:intron 15.0%
!!! CTTTAGTTAGATTTTTTATA+TGG - Chr4:29010050-29010069 MsG0480019889.01.T01:intron 15.0%
!!! GAAATTGATTTTAACTTTTA+GGG - Chr4:29005984-29006003 MsG0480019889.01.T01:intron 15.0%
!!! GATATTAATGTTAATTTTAC+TGG - Chr4:29006411-29006430 MsG0480019889.01.T01:CDS 15.0%
!!! TAATTTTGATTGTTAATATG+CGG - Chr4:29003826-29003845 MsG0480019889.01.T01:intron 15.0%
!!! TATCATAACATTTTAAATTG+TGG - Chr4:29009055-29009074 MsG0480019889.01.T01:CDS 15.0%
!!! TGAAATTGATTTTAACTTTT+AGG - Chr4:29005983-29006002 MsG0480019889.01.T01:intron 15.0%
!!! TTAATTTTCAGTTATGATTT+GGG - Chr4:29007883-29007902 MsG0480019889.01.T01:intron 15.0%
!!! TTTAATTTTCAGTTATGATT+TGG - Chr4:29007882-29007901 MsG0480019889.01.T01:intron 15.0%
!!! TTTATTCTCTTAAATTTTGT+TGG - Chr4:29009228-29009247 MsG0480019889.01.T01:CDS 15.0%
!! AAAAAATTAGAATTAGGGTT+AGG + Chr4:29007544-29007563 None:intergenic 20.0%
!! AAAAATTAGAATTAGGGTTA+GGG + Chr4:29007543-29007562 None:intergenic 20.0%
!! AAAATGGAAACAAACAATAT+TGG - Chr4:29009407-29009426 MsG0480019889.01.T01:CDS 20.0%
!! AATGAATGATTCTTAATTCA+TGG - Chr4:29006389-29006408 MsG0480019889.01.T01:intron 20.0%
!! ACATCATTATATATTGTGAA+TGG - Chr4:29009516-29009535 MsG0480019889.01.T01:intron 20.0%
!! AGTTTAAACAATGATTTACT+AGG - Chr4:29010486-29010505 MsG0480019889.01.T01:intron 20.0%
!! ATGTTCCTATTGATAAAAAA+AGG - Chr4:29004043-29004062 MsG0480019889.01.T01:intron 20.0%
!! ATTCTTTAATGTGTATGTTT+CGG + Chr4:29003538-29003557 None:intergenic 20.0%
!! ATTTCAGGATCAATTTATAA+AGG + Chr4:29011398-29011417 None:intergenic 20.0%
!! CATCATTATATATTGTGAAT+GGG - Chr4:29009517-29009536 MsG0480019889.01.T01:intron 20.0%
!! GTAATAAATAACACTACAAA+TGG + Chr4:29011268-29011287 None:intergenic 20.0%
!! TAAGTCTTTCTCAATTTAAT+TGG - Chr4:29006125-29006144 MsG0480019889.01.T01:intron 20.0%
!! TATACTAACAGTTTAAACAA+TGG - Chr4:29008552-29008571 MsG0480019889.01.T01:intron 20.0%
!! TATCTTATAGGACTTAATTA+GGG + Chr4:29008168-29008187 None:intergenic 20.0%
!! TGATAAACATAACTAAAATG+TGG - Chr4:29007226-29007245 MsG0480019889.01.T01:intron 20.0%
!! TGATTTAAAAAATTCAAGCA+AGG - Chr4:29008934-29008953 MsG0480019889.01.T01:CDS 20.0%
!! TGCATTTCATTCAAAATAAT+AGG + Chr4:29003299-29003318 None:intergenic 20.0%
!! TTAACAATCAAAATTATGCT+AGG + Chr4:29003822-29003841 None:intergenic 20.0%
!! TTATAAATTGATCCTGAAAT+TGG - Chr4:29011398-29011417 MsG0480019889.01.T01:CDS 20.0%
!! TTATCTTATAGGACTTAATT+AGG + Chr4:29008169-29008188 None:intergenic 20.0%
!! TTATGTTTATCACAACATAA+AGG + Chr4:29007218-29007237 None:intergenic 20.0%
!! TTCATTAAACAGAAAACTAA+AGG + Chr4:29006375-29006394 None:intergenic 20.0%
!! TTCATTCAAAATAATAGGTT+GGG + Chr4:29003294-29003313 None:intergenic 20.0%
!! TTTCAGGATCAATTTATAAA+GGG + Chr4:29011397-29011416 None:intergenic 20.0%
!! TTTCATTCAAAATAATAGGT+TGG + Chr4:29003295-29003314 None:intergenic 20.0%
!!! AAATATATTTTTGAGAGGAA+TGG - Chr4:29005483-29005502 MsG0480019889.01.T01:intron 20.0%
!!! AGTTTTTTATGACATTTTGT+CGG - Chr4:29005329-29005348 MsG0480019889.01.T01:intron 20.0%
!!! ATATTGACTTAACTCTTTTT+TGG - Chr4:29008585-29008604 MsG0480019889.01.T01:intron 20.0%
!!! ATTGTGTAAATGATTTTTCA+CGG + Chr4:29008891-29008910 None:intergenic 20.0%
!!! ATTTTAAAATAGGGTAGAAA+CGG - Chr4:29003471-29003490 MsG0480019889.01.T01:intron 20.0%
!!! ATTTTTTTCTCCTTTCTTTT+TGG - Chr4:29011300-29011319 MsG0480019889.01.T01:CDS 20.0%
!!! CTTGAATTTTTTAAATCAAG+TGG + Chr4:29008932-29008951 None:intergenic 20.0%
!!! GATGAAAATATATTTTTGAG+AGG - Chr4:29005478-29005497 MsG0480019889.01.T01:intron 20.0%
!!! TAAATTTTGTTGGATATACA+AGG - Chr4:29009238-29009257 MsG0480019889.01.T01:CDS 20.0%
!!! TATTGACTTAACTCTTTTTT+GGG - Chr4:29008586-29008605 MsG0480019889.01.T01:intron 20.0%
!!! TTAACACTTTAATATTGGTT+CGG - Chr4:29002987-29003006 MsG0480019889.01.T01:CDS 20.0%
!!! TTAATGGTATGAACTTTTTA+AGG + Chr4:29009200-29009219 None:intergenic 20.0%
!!! TTAATTTTACTGGTTTTCAT+GGG - Chr4:29006421-29006440 MsG0480019889.01.T01:CDS 20.0%
!!! TTTCTTTGAAGGTTATTAAA+AGG - Chr4:29007147-29007166 MsG0480019889.01.T01:intron 20.0%
!!! TTTTAGTTAGTCTATGTAAA+TGG - Chr4:29006604-29006623 MsG0480019889.01.T01:intron 20.0%
! AAAATAGTTGTACAATGCTT+AGG + Chr4:29010739-29010758 None:intergenic 25.0%
! AAACTGACAGGTTATATAAT+AGG - Chr4:29006215-29006234 MsG0480019889.01.T01:intron 25.0%
! AAAGCTAAGAAATGTGTTTA+TGG - Chr4:29009013-29009032 MsG0480019889.01.T01:CDS 25.0%
! AAATAACACTACAAATGGAA+AGG + Chr4:29011263-29011282 None:intergenic 25.0%
! AAGTGAACAAAGGATATATA+TGG - Chr4:29004198-29004217 MsG0480019889.01.T01:intron 25.0%
! AATGGAAAGGTAAATAATGA+AGG + Chr4:29011250-29011269 None:intergenic 25.0%
! AGAATAAAGTTTCAATCCAA+TGG - Chr4:29009628-29009647 MsG0480019889.01.T01:intron 25.0%
! AGCTTAATCACAAACAATTT+AGG + Chr4:29006297-29006316 None:intergenic 25.0%
! ATGATGAAATGAATGAAATC+AGG - Chr4:29005518-29005537 MsG0480019889.01.T01:intron 25.0%
! ATTCCAAAAACATCAAACAA+GGG + Chr4:29006852-29006871 None:intergenic 25.0%
! CTGTTAGTATACATTATCAT+AGG + Chr4:29008543-29008562 None:intergenic 25.0%
! GAAAATTAGAGAAAAGCAAA+AGG + Chr4:29007822-29007841 None:intergenic 25.0%
! GAGTGTCAATATAATCAAAA+TGG - Chr4:29009391-29009410 MsG0480019889.01.T01:CDS 25.0%
! GCTTAATCACAAACAATTTA+GGG + Chr4:29006296-29006315 None:intergenic 25.0%
! TAAAGTAAAACAAGAAAGCA+TGG - Chr4:29008224-29008243 MsG0480019889.01.T01:intron 25.0%
! TAGGTTCATTGAATAATATC+TGG - Chr4:29010658-29010677 MsG0480019889.01.T01:intron 25.0%
! TCGGTTTAACACTTTAATAT+TGG - Chr4:29002982-29003001 MsG0480019889.01.T01:CDS 25.0%
! TGATGAAATGAATGAAATCA+GGG - Chr4:29005519-29005538 MsG0480019889.01.T01:intron 25.0%
! TGGAAATACAACAAAATAAC+AGG - Chr4:29004218-29004237 MsG0480019889.01.T01:intron 25.0%
! TTATGCTAGTAAATAACCTT+AGG - Chr4:29010304-29010323 MsG0480019889.01.T01:intron 25.0%
! TTCTCAATTTAATTGGACAA+AGG - Chr4:29006132-29006151 MsG0480019889.01.T01:intron 25.0%
! TTGATAAGCACTTATCTTAT+AGG + Chr4:29008180-29008199 None:intergenic 25.0%
! TTGTTTCCCTTTCTAATAAT+CGG - Chr4:29007469-29007488 MsG0480019889.01.T01:intron 25.0%
! TTTGTCAACTCAATAAACAT+AGG + Chr4:29010361-29010380 None:intergenic 25.0%
!! AACTGTACTATATGGATTTT+GGG - Chr4:29003049-29003068 MsG0480019889.01.T01:intron 25.0%
!! AAGCTATAAACTGTTTTCAT+CGG - Chr4:29008262-29008281 MsG0480019889.01.T01:intron 25.0%
!! AATTCGGTTTAATATTGGTT+CGG - Chr4:29002940-29002959 MsG0480019889.01.T01:CDS 25.0%
!! ACTTTTCCGATTATTAGAAA+GGG + Chr4:29007478-29007497 None:intergenic 25.0%
!! AGTTTAGAATTGATTTCTTG+AGG - Chr4:29006545-29006564 MsG0480019889.01.T01:intron 25.0%
!! ATAGTTTTCATAGGCTATTT+TGG - Chr4:29010201-29010220 MsG0480019889.01.T01:intron 25.0%
!! ATCATCAACATGTTTTCATA+AGG + Chr4:29010767-29010786 None:intergenic 25.0%
!! ATTGCATTTTTGAATTATGG+AGG - Chr4:29011348-29011367 MsG0480019889.01.T01:CDS 25.0%
!! ATTTGCTGAAAGGTAAATTT+CGG + Chr4:29003438-29003457 None:intergenic 25.0%
!! GAGCTATAAATAGTTTTCAT+AGG - Chr4:29010192-29010211 MsG0480019889.01.T01:intron 25.0%
!! TACAGCAAAAAACACATTTT+AGG - Chr4:29010639-29010658 MsG0480019889.01.T01:intron 25.0%
!! TTTTGGATACATGGATTTTT+TGG - Chr4:29011317-29011336 MsG0480019889.01.T01:CDS 25.0%
!! TTTTTAACACTTCATACCAT+TGG + Chr4:29009647-29009666 None:intergenic 25.0%
!!! AAAAAAGGGTAGTTTTAAGA+TGG - Chr4:29003698-29003717 MsG0480019889.01.T01:intron 25.0%
!!! AGTTTTTTTTTGGTTACAGA+TGG - Chr4:29011154-29011173 MsG0480019889.01.T01:intron 25.0%
!!! ATTAATCTCTTTTTGTTTGC+AGG - Chr4:29004538-29004557 MsG0480019889.01.T01:intron 25.0%
!!! ATTGGCTTTTACTCTTTTTT+GGG - Chr4:29010582-29010601 MsG0480019889.01.T01:intron 25.0%
!!! GGATTTTTTTCTTTCTTTGA+AGG - Chr4:29007136-29007155 MsG0480019889.01.T01:intron 25.0%
!!! GTTAATTTTACTGGTTTTCA+TGG - Chr4:29006420-29006439 MsG0480019889.01.T01:CDS 25.0%
!!! GTTTTAAATCGACTCTTTTT+CGG - Chr4:29005189-29005208 MsG0480019889.01.T01:intron 25.0%
!!! GTTTTGAGTTTTGATGAATT+TGG - Chr4:29006944-29006963 MsG0480019889.01.T01:intron 25.0%
!!! TATTGGCTTTTACTCTTTTT+TGG - Chr4:29010581-29010600 MsG0480019889.01.T01:intron 25.0%
!!! TGATTTTAACTTTTAGGGTT+TGG - Chr4:29005989-29006008 MsG0480019889.01.T01:intron 25.0%
!!! TGTAGCCTTTTTTTATCAAT+AGG + Chr4:29004051-29004070 None:intergenic 25.0%
!!! TGTTTTTTTGTATGCTTCTA+TGG - Chr4:29010408-29010427 MsG0480019889.01.T01:intron 25.0%
!!! TTAATCTCTTTTTGTTTGCA+GGG - Chr4:29004539-29004558 MsG0480019889.01.T01:intron 25.0%
!!! TTTCACAAGGTTTTAAATCA+CGG + Chr4:29009745-29009764 None:intergenic 25.0%
!!! TTTGTTTTGAAAAGAAGTTG+TGG - Chr4:29007018-29007037 MsG0480019889.01.T01:intron 25.0%
AAAAGGTTTAGTCGTTTAGA+TGG - Chr4:29007297-29007316 MsG0480019889.01.T01:intron 30.0%
AAATTCTTTCATCAACCAGT+TGG - Chr4:29006062-29006081 MsG0480019889.01.T01:intron 30.0%
AACAGTTTAAACAATGGTTG+AGG - Chr4:29008558-29008577 MsG0480019889.01.T01:intron 30.0%
AACGAAAGTTACAAAGGATA+TGG - Chr4:29007778-29007797 MsG0480019889.01.T01:intron 30.0%
ACAAGGACTGCATAAAAATT+AGG + Chr4:29010810-29010829 None:intergenic 30.0%
ACGAAAAATATGCAATACAG+AGG - Chr4:29003911-29003930 MsG0480019889.01.T01:intron 30.0%
ACGAAACAGTGACAAAAAAT+TGG - Chr4:29003942-29003961 MsG0480019889.01.T01:intron 30.0%
ACTCTCATGTTAAGTTCATT+AGG - Chr4:29003181-29003200 MsG0480019889.01.T01:intron 30.0%
AGAAGATTGCAAAAAGTTGT+GGG - Chr4:29004268-29004287 MsG0480019889.01.T01:intron 30.0%
AGAGACATTCTATAAGATTG+TGG + Chr4:29003227-29003246 None:intergenic 30.0%
ATATCCTTTGTAACTTTCGT+TGG + Chr4:29007779-29007798 None:intergenic 30.0%
ATCCATGTATCCAAAAAGAA+AGG + Chr4:29011313-29011332 None:intergenic 30.0%
ATGGAGGATATTTCCAATAA+AGG - Chr4:29011364-29011383 MsG0480019889.01.T01:CDS 30.0%
ATTGGTGAGATTGAGAAAAA+GGG - Chr4:29004430-29004449 MsG0480019889.01.T01:intron 30.0%
ATTGTGCGAAAGACAAAAAA+AGG - Chr4:29003683-29003702 MsG0480019889.01.T01:intron 30.0%
ATTGTGGTCATGATATTTGA+TGG - Chr4:29009071-29009090 MsG0480019889.01.T01:CDS 30.0%
CAACTTACAACTGTACTATA+TGG - Chr4:29003041-29003060 MsG0480019889.01.T01:intron 30.0%
CAATTTCAATTTCAATGTCC+TGG + Chr4:29005971-29005990 None:intergenic 30.0%
CATAAGAAAGCCAAATTCAT+AGG + Chr4:29006192-29006211 None:intergenic 30.0%
CCAATATAAAAACACTGCAT+AGG + Chr4:29010567-29010586 None:intergenic 30.0%
CTTTCTAATAATCGGAAAAG+TGG - Chr4:29007477-29007496 MsG0480019889.01.T01:intron 30.0%
GAACCAATATTAAACCGAAT+TGG + Chr4:29002941-29002960 None:intergenic 30.0%
GAGAATACATAAATGTGACA+TGG + Chr4:29007358-29007377 None:intergenic 30.0%
GATTCCAAAAACATCAAACA+AGG + Chr4:29006853-29006872 None:intergenic 30.0%
GCCTTATGAAGATTATGATT+GGG - Chr4:29004601-29004620 MsG0480019889.01.T01:intron 30.0%
GGTGTAAACATCTAAAAAGT+GGG - Chr4:29010679-29010698 MsG0480019889.01.T01:intron 30.0%
GGTTTAGTACAACACTTAAT+CGG - Chr4:29003013-29003032 MsG0480019889.01.T01:CDS 30.0%
GTTCAGAAGACGTAAATAAA+TGG - Chr4:29002858-29002877 MsG0480019889.01.T01:three_prime_UTR 30.0%
GTTTAGTACAACACTTAATC+GGG - Chr4:29003014-29003033 MsG0480019889.01.T01:CDS 30.0%
TAATGGCTTATGTAACAATG+AGG - Chr4:29007062-29007081 MsG0480019889.01.T01:intron 30.0%
TATAAACAAGCTTCTGCATT+TGG + Chr4:29008428-29008447 None:intergenic 30.0%
TATATGCCAAAGAGCTTAAA+TGG + Chr4:29006515-29006534 None:intergenic 30.0%
TCAAATGACATGACAAAAGA+TGG + Chr4:29006469-29006488 None:intergenic 30.0%
TCATAACTGCTACATAACTT+CGG - Chr4:29003768-29003787 MsG0480019889.01.T01:intron 30.0%
TCCCAATCATAATCTTCATA+AGG + Chr4:29004605-29004624 None:intergenic 30.0%
TGAATGCTTGATTGAATGAA+TGG - Chr4:29005445-29005464 MsG0480019889.01.T01:intron 30.0%
TGACTTAGAAAAGTGAACAA+AGG - Chr4:29004188-29004207 MsG0480019889.01.T01:intron 30.0%
TGCAGAAAAATAGTTAGTGA+TGG - Chr4:29011124-29011143 MsG0480019889.01.T01:CDS 30.0%
TGGAGGATATTTCCAATAAA+GGG - Chr4:29011365-29011384 MsG0480019889.01.T01:CDS 30.0%
TGGTGTAAACATCTAAAAAG+TGG - Chr4:29010678-29010697 MsG0480019889.01.T01:intron 30.0%
TTAAAACAAGTGCCAATTTC+AGG + Chr4:29011413-29011432 None:intergenic 30.0%
TTATCTGTAGCCTATGAATT+TGG - Chr4:29006179-29006198 MsG0480019889.01.T01:intron 30.0%
TTATGAAGATTATGATTGGG+AGG - Chr4:29004604-29004623 MsG0480019889.01.T01:intron 30.0%
TTATGGCAGTAAATAAGCTT+AGG - Chr4:29008382-29008401 MsG0480019889.01.T01:intron 30.0%
TTGTGCGAAAGACAAAAAAA+GGG - Chr4:29003684-29003703 MsG0480019889.01.T01:intron 30.0%
TTTCATAAGCTCAATCCAAA+CGG + Chr4:29007971-29007990 None:intergenic 30.0%
! AAGGATAATGTCTTTTCAGT+TGG - Chr4:29005716-29005735 MsG0480019889.01.T01:intron 30.0%
! AATGTGTTTATGGACTGTTA+CGG - Chr4:29009023-29009042 MsG0480019889.01.T01:CDS 30.0%
! AATTTTCTTGTTGCAGAACT+TGG + Chr4:29009574-29009593 None:intergenic 30.0%
! AGCCTTATGAAGATTATGAT+TGG - Chr4:29004600-29004619 MsG0480019889.01.T01:intron 30.0%
! AGGATAATGTCTTTTCAGTT+GGG - Chr4:29005717-29005736 MsG0480019889.01.T01:intron 30.0%
! ATAGAGAGATCCAAATTTTG+TGG + Chr4:29004296-29004315 None:intergenic 30.0%
! ATTTTCTTGTTGCAGAACTT+GGG + Chr4:29009573-29009592 None:intergenic 30.0%
! CAACTGTACTATATGGATTT+TGG - Chr4:29003048-29003067 MsG0480019889.01.T01:intron 30.0%
! CACTTTTCCGATTATTAGAA+AGG + Chr4:29007479-29007498 None:intergenic 30.0%
! CTCAGACTCTTTTGAATAAA+TGG - Chr4:29003791-29003810 MsG0480019889.01.T01:intron 30.0%
! GAATCGATTTCTTCTTAGTT+TGG + Chr4:29007619-29007638 None:intergenic 30.0%
! GCACTGATGAAAAATGTTAA+TGG + Chr4:29009472-29009491 None:intergenic 30.0%
! TAATTTTTATGCAGTCCTTG+TGG - Chr4:29010809-29010828 MsG0480019889.01.T01:intron 30.0%
! TAGAGAGATCCAAATTTTGT+GGG + Chr4:29004295-29004314 None:intergenic 30.0%
! TATTTCTAAAAGCTACCACA+AGG + Chr4:29010827-29010846 None:intergenic 30.0%
! TTACGTTACAATCTGCATTT+TGG + Chr4:29003881-29003900 None:intergenic 30.0%
! TTATGACATTTTGTCGGATA+TGG - Chr4:29005335-29005354 MsG0480019889.01.T01:intron 30.0%
! TTCAGTTATGATTTGGGTTT+GGG - Chr4:29007889-29007908 MsG0480019889.01.T01:intron 30.0%
! TTTCAGTTATGATTTGGGTT+TGG - Chr4:29007888-29007907 MsG0480019889.01.T01:intron 30.0%
! TTTGCTGTAATAATAGTGAC+CGG + Chr4:29010628-29010647 None:intergenic 30.0%
! TTTTCTCCATTTAAGCTCTT+TGG - Chr4:29006506-29006525 MsG0480019889.01.T01:intron 30.0%
!! AAAAGGCATCTGATTCAAAT+TGG - Chr4:29007164-29007183 MsG0480019889.01.T01:intron 30.0%
!! ACATGTTGTTTGTCAGATTT+TGG - Chr4:29007115-29007134 MsG0480019889.01.T01:intron 30.0%
!! ACTTTAATATTGGTTCGGTT+TGG - Chr4:29002992-29003011 MsG0480019889.01.T01:CDS 30.0%
!! CCTATGCAGTGTTTTTATAT+TGG - Chr4:29010564-29010583 MsG0480019889.01.T01:intron 30.0%
!! GTTTTGATATTTCTTCCTCT+AGG - Chr4:29006697-29006716 MsG0480019889.01.T01:intron 30.0%
!! TACTTTGTAGTGTGTTTTTG+TGG - Chr4:29007854-29007873 MsG0480019889.01.T01:intron 30.0%
!! TGGATATGTTTTTGCTTTCT+AGG - Chr4:29002811-29002830 MsG0480019889.01.T01:three_prime_UTR 30.0%
!! TGTGGTAGCTTTTAGAAATA+AGG - Chr4:29010827-29010846 MsG0480019889.01.T01:intron 30.0%
!!! AATTTGGTGTGGAACTTTTA+AGG - Chr4:29006960-29006979 MsG0480019889.01.T01:intron 30.0%
!!! TCTTTTTTGGGCTTATCTTA+CGG - Chr4:29008598-29008617 MsG0480019889.01.T01:intron 30.0%
!!! TGGGGTGTGATTTTAAAATA+GGG - Chr4:29003462-29003481 MsG0480019889.01.T01:intron 30.0%
!!! TGGTAGCGATAGTTTTTTTT+TGG - Chr4:29011144-29011163 MsG0480019889.01.T01:intron 30.0%
!!! TTTTTTGGTTACAGATGGTA+GGG - Chr4:29011159-29011178 MsG0480019889.01.T01:intron 30.0%
!!! TTTTTTTGGTTACAGATGGT+AGG - Chr4:29011158-29011177 MsG0480019889.01.T01:intron 30.0%
AAAACGCTTATGCACCAATT+CGG - Chr4:29002924-29002943 MsG0480019889.01.T01:exon 35.0%
AAACTGACCTAAAAGAGAAG+AGG + Chr4:29005907-29005926 None:intergenic 35.0%
AAAGCTGATAGATGTGTGTA+TGG + Chr4:29009787-29009806 None:intergenic 35.0%
AAATCAAGTGGTTGCCAAAA+AGG + Chr4:29008920-29008939 None:intergenic 35.0%
AACAATGAGGTTCATGAATG+AGG - Chr4:29007075-29007094 MsG0480019889.01.T01:intron 35.0%
AAGACACTAGCAAGAGTTTA+TGG - Chr4:29008365-29008384 MsG0480019889.01.T01:intron 35.0%
AAGGCTACACTATTATTCTG+TGG - Chr4:29004062-29004081 MsG0480019889.01.T01:intron 35.0%
AATCAAGTGGTTGCCAAAAA+GGG + Chr4:29008919-29008938 None:intergenic 35.0%
AATTTACCTTTGCGAGTTTG+AGG + Chr4:29007665-29007684 None:intergenic 35.0%
ACGGGTATACAAATTTCACA+AGG + Chr4:29009758-29009777 None:intergenic 35.0%
ACTAAATTCCAAGGTCTGTA+GGG + Chr4:29010015-29010034 None:intergenic 35.0%
AGATTCATAGAACGAAGCTA+AGG - Chr4:29008743-29008762 MsG0480019889.01.T01:intron 35.0%
AGCAAAACAATACTGAGAAG+TGG + Chr4:29009355-29009374 None:intergenic 35.0%
AGGACTTACCTATTTCATGA+GGG - Chr4:29006904-29006923 MsG0480019889.01.T01:intron 35.0%
AGTCCTATGAGAACAAAGAA+AGG + Chr4:29006890-29006909 None:intergenic 35.0%
ATGTGTGTATGGACATTTAC+GGG + Chr4:29009776-29009795 None:intergenic 35.0%
CAGAAACTAAGACTATGGTT+AGG + Chr4:29006778-29006797 None:intergenic 35.0%
CATCACAGAAACTAAGACTA+TGG + Chr4:29006783-29006802 None:intergenic 35.0%
CATTGGTGAGATTGAGAAAA+AGG - Chr4:29004429-29004448 MsG0480019889.01.T01:intron 35.0%
CCATGAGAGTTTGAGAAAAA+GGG - Chr4:29006995-29007014 MsG0480019889.01.T01:intron 35.0%
CCTTATATGCTGAAATTGAG+GGG - Chr4:29006090-29006109 MsG0480019889.01.T01:intron 35.0%
CCTTGGAATTTAGTAACACA+TGG - Chr4:29010021-29010040 MsG0480019889.01.T01:intron 35.0%
CTAAAATAAGCCAAGCCAAA+TGG - Chr4:29008141-29008160 MsG0480019889.01.T01:intron 35.0%
CTATTTGGTTGGACAGAAAT+GGG + Chr4:29004392-29004411 None:intergenic 35.0%
CTGCTTGGATAAACAGATTA+AGG - Chr4:29007943-29007962 MsG0480019889.01.T01:intron 35.0%
CTTATATGCTGAAATTGAGG+GGG - Chr4:29006091-29006110 MsG0480019889.01.T01:intron 35.0%
GAAAGAAGAAGGAAAAAACG+CGG + Chr4:29005776-29005795 None:intergenic 35.0%
GAATCAAGTAGTTGCCAAAA+GGG - Chr4:29009881-29009900 MsG0480019889.01.T01:intron 35.0%
GAGAAGATTGCAAAAAGTTG+TGG - Chr4:29004267-29004286 MsG0480019889.01.T01:intron 35.0%
GATGTGTGTATGGACATTTA+CGG + Chr4:29009777-29009796 None:intergenic 35.0%
GCACCAATTCGGTTTAATAT+TGG - Chr4:29002935-29002954 MsG0480019889.01.T01:CDS 35.0%
GCCTTATATGCTGAAATTGA+GGG - Chr4:29006089-29006108 MsG0480019889.01.T01:intron 35.0%
GCTCATGAACAATTTACCTA+AGG + Chr4:29008401-29008420 None:intergenic 35.0%
GGAGGATATTTCCAATAAAG+GGG - Chr4:29011366-29011385 MsG0480019889.01.T01:CDS 35.0%
GGTTCAATTTCTGTTAAACC+AGG - Chr4:29010993-29011012 MsG0480019889.01.T01:intron 35.0%
TAATCTTCATAAGGCTTCCT+CGG + Chr4:29004596-29004615 None:intergenic 35.0%
TACCTTTCAGCAAATCTAGT+GGG - Chr4:29003443-29003462 MsG0480019889.01.T01:intron 35.0%
TACTAAATTCCAAGGTCTGT+AGG + Chr4:29010016-29010035 None:intergenic 35.0%
TAGCTAGAATGAGAAGAAGA+AGG - Chr4:29002670-29002689 MsG0480019889.01.T01:three_prime_UTR 35.0%
TAGGACTTACCTATTTCATG+AGG - Chr4:29006903-29006922 MsG0480019889.01.T01:intron 35.0%
TATTTGGTTGGACAGAAATG+GGG + Chr4:29004391-29004410 None:intergenic 35.0%
TCAATTTCTGTTAAACCAGG+AGG - Chr4:29010996-29011015 MsG0480019889.01.T01:intron 35.0%
TCCATGAGAGTTTGAGAAAA+AGG - Chr4:29006994-29007013 MsG0480019889.01.T01:intron 35.0%
TCTATTTGGTTGGACAGAAA+TGG + Chr4:29004393-29004412 None:intergenic 35.0%
TCTTTGATCCCTCATGAAAT+AGG + Chr4:29006915-29006934 None:intergenic 35.0%
TGAATCAAGTAGTTGCCAAA+AGG - Chr4:29009880-29009899 MsG0480019889.01.T01:intron 35.0%
TGCTTATAACAATGACCAGA+GGG - Chr4:29010706-29010725 MsG0480019889.01.T01:intron 35.0%
TGTTTATCCAAGCAGAAACA+TGG + Chr4:29007938-29007957 None:intergenic 35.0%
TTACCTTTCAGCAAATCTAG+TGG - Chr4:29003442-29003461 MsG0480019889.01.T01:intron 35.0%
TTGCATGAGTTAACTCACAT+CGG + Chr4:29005698-29005717 None:intergenic 35.0%
TTGCTTATAACAATGACCAG+AGG - Chr4:29010705-29010724 MsG0480019889.01.T01:intron 35.0%
TTTAATTGGACAAAGGCAGA+AGG - Chr4:29006139-29006158 MsG0480019889.01.T01:intron 35.0%
TTTCTTATGCTGAAACTGAC+AGG - Chr4:29006203-29006222 MsG0480019889.01.T01:intron 35.0%
! AAAGTATCCATGTTTCTGCT+TGG - Chr4:29007928-29007947 MsG0480019889.01.T01:intron 35.0%
! AATTTTCCAAACACTTGCAG+TGG + Chr4:29006676-29006695 None:intergenic 35.0%
! AGTCGATTTAAAACCACATC+AGG + Chr4:29005183-29005202 None:intergenic 35.0%
! ATAATAGGTTGGGTACATGT+TGG + Chr4:29003284-29003303 None:intergenic 35.0%
! ATGTGTTTATGGACTGTTAC+GGG - Chr4:29009024-29009043 MsG0480019889.01.T01:CDS 35.0%
! CCATGTGTTACTAAATTCCA+AGG + Chr4:29010024-29010043 None:intergenic 35.0%
! CTCCTTTCTTTTTGGATACA+TGG - Chr4:29011308-29011327 MsG0480019889.01.T01:CDS 35.0%
! CTGCTTTAACTTCATTGCAA+TGG + Chr4:29011038-29011057 None:intergenic 35.0%
! GGCAATATAGTCTTTTCAGT+TGG + Chr4:29003592-29003611 None:intergenic 35.0%
! TGCTCGCAAGTATTTTCATT+CGG + Chr4:29010239-29010258 None:intergenic 35.0%
!! ATGTTTTTGTGCAGCTTATG+AGG - Chr4:29010526-29010545 MsG0480019889.01.T01:intron 35.0%
!! GAGTTTTGATGAATTTGGTG+TGG - Chr4:29006949-29006968 MsG0480019889.01.T01:intron 35.0%
!! GCATTGATGAAAAGCGTTAT+TGG - Chr4:29009275-29009294 MsG0480019889.01.T01:CDS 35.0%
!! TAGGTTTTGTCCTTTCAGTT+CGG - Chr4:29002830-29002849 MsG0480019889.01.T01:three_prime_UTR 35.0%
!! TGACCCTTGTTTGATGTTTT+TGG - Chr4:29006846-29006865 MsG0480019889.01.T01:intron 35.0%
!!! CTCTTTTTTGGGCTTATCTT+TGG - Chr4:29008597-29008616 MsG0480019889.01.T01:intron 35.0%
!!! GTGGGGTGTGATTTTAAAAT+AGG - Chr4:29003461-29003480 MsG0480019889.01.T01:intron 35.0%
AAACAGATTAAGGCTCCGTT+TGG - Chr4:29007953-29007972 MsG0480019889.01.T01:intron 40.0%
AAAGGGACAATCCCCTTTAT+TGG + Chr4:29011380-29011399 None:intergenic 40.0%
AACGATTCTTCACGACTGAT+AGG - Chr4:29009923-29009942 MsG0480019889.01.T01:intron 40.0%
AAGAAGGAAAAAACGCGGTT+AGG + Chr4:29005771-29005790 None:intergenic 40.0%
AAGCAAGGAGAATTGTCACA+CGG - Chr4:29008949-29008968 MsG0480019889.01.T01:CDS 40.0%
ACAATAACCTCTTCGTAGAC+AGG + Chr4:29005077-29005096 None:intergenic 40.0%
ACACTCAGTCTCTATTTGGT+TGG + Chr4:29004403-29004422 None:intergenic 40.0%
ACCTTTCAGCAAATCTAGTG+GGG - Chr4:29003444-29003463 MsG0480019889.01.T01:intron 40.0%
ACTTAACTCACACAGGATAC+AGG + Chr4:29005609-29005628 None:intergenic 40.0%
ACTTGTAAGCACTTGTATCG+TGG - Chr4:29008628-29008647 MsG0480019889.01.T01:intron 40.0%
AGAAGGAAAAAACGCGGTTA+GGG + Chr4:29005770-29005789 None:intergenic 40.0%
AGATGTTCAACTGATCCTCT+CGG - Chr4:29008865-29008884 MsG0480019889.01.T01:CDS 40.0%
AGGAATGCATCTCAGTTTGT+TGG - Chr4:29002768-29002787 MsG0480019889.01.T01:three_prime_UTR 40.0%
AGGATCAGTTGAACATCTGT+CGG + Chr4:29008863-29008882 None:intergenic 40.0%
AGTGTCTAACATCAGCTAGA+AGG + Chr4:29004653-29004672 None:intergenic 40.0%
ATCTGCAGAAAGAAGACTGA+GGG - Chr4:29008833-29008852 MsG0480019889.01.T01:CDS 40.0%
ATGTTAGACACTTCAGACTC+GGG - Chr4:29004661-29004680 MsG0480019889.01.T01:intron 40.0%
ATTGGATTCATGCAAGTGTG+AGG - Chr4:29007182-29007201 MsG0480019889.01.T01:intron 40.0%
CAAACAAGGGTCAAAGACAA+AGG + Chr4:29006839-29006858 None:intergenic 40.0%
CAAACACGGTATAATTGGAC+CGG + Chr4:29005230-29005249 None:intergenic 40.0%
CAAGACACTCAGTCTCTATT+TGG + Chr4:29004407-29004426 None:intergenic 40.0%
CAATTATACCGTGTTTGAGG+AGG - Chr4:29005233-29005252 MsG0480019889.01.T01:intron 40.0%
CAGGAATCCATCTCATATCT+CGG - Chr4:29004237-29004256 MsG0480019889.01.T01:intron 40.0%
CATTCAGTGAGGTAGATGAA+TGG - Chr4:29004986-29005005 MsG0480019889.01.T01:intron 40.0%
CCCCTCAATTTCAGCATATA+AGG + Chr4:29006093-29006112 None:intergenic 40.0%
CTAGAATGAGAAGAAGAAGG+AGG - Chr4:29002673-29002692 MsG0480019889.01.T01:three_prime_UTR 40.0%
CTCCTCAAACACGGTATAAT+TGG + Chr4:29005235-29005254 None:intergenic 40.0%
CTTAACTCACACAGGATACA+GGG + Chr4:29005608-29005627 None:intergenic 40.0%
CTTGCAGCAGAATCATAAGA+CGG - Chr4:29006724-29006743 MsG0480019889.01.T01:intron 40.0%
GAAGCCAACGAAAGTTACAA+AGG - Chr4:29007772-29007791 MsG0480019889.01.T01:intron 40.0%
GAAGCCATTAACACTACAAC+GGG - Chr4:29008650-29008669 MsG0480019889.01.T01:intron 40.0%
GAAGCTAAGGATTGATTGTG+TGG - Chr4:29008756-29008775 MsG0480019889.01.T01:intron 40.0%
GATGTGAGTTAACTCATGCA+AGG - Chr4:29005697-29005716 MsG0480019889.01.T01:intron 40.0%
GATGTTAGACACTTCAGACT+CGG - Chr4:29004660-29004679 MsG0480019889.01.T01:intron 40.0%
GATTATCACTTAAGTCACGC+AGG + Chr4:29003647-29003666 None:intergenic 40.0%
GCTCCTTTCTTTGTTCTCAT+AGG - Chr4:29006884-29006903 MsG0480019889.01.T01:intron 40.0%
GCTGTAAGCTCTTTCAAACA+CGG - Chr4:29010273-29010292 MsG0480019889.01.T01:intron 40.0%
GGAAGCCATTAACACTACAA+CGG - Chr4:29008649-29008668 MsG0480019889.01.T01:intron 40.0%
GGACTTAATTAGGGTCCATT+TGG + Chr4:29008159-29008178 None:intergenic 40.0%
GTATGCCATCCTCTTATGAT+CGG - Chr4:29005018-29005037 MsG0480019889.01.T01:intron 40.0%
GTCCAATTATACCGTGTTTG+AGG - Chr4:29005230-29005249 MsG0480019889.01.T01:intron 40.0%
GTGCTATGTGTGAAAGAAGA+AGG + Chr4:29005787-29005806 None:intergenic 40.0%
TAATTAGGGTCCATTTGGCT+TGG + Chr4:29008154-29008173 None:intergenic 40.0%
TATCTGCAGAAAGAAGACTG+AGG - Chr4:29008832-29008851 MsG0480019889.01.T01:CDS 40.0%
TATGATTACCACTCCTACGA+TGG + Chr4:29010111-29010130 None:intergenic 40.0%
TATTGAGCCGAGATATGAGA+TGG + Chr4:29004247-29004266 None:intergenic 40.0%
TCAAGAGGCTCAATCATAGT+AGG + Chr4:29004870-29004889 None:intergenic 40.0%
TCAATCATAGTAGGAGGTCT+AGG + Chr4:29004861-29004880 None:intergenic 40.0%
TCATAAGAGGATGGCATACA+CGG + Chr4:29005017-29005036 None:intergenic 40.0%
TGAACCAAAACCGAACTGAA+AGG + Chr4:29002843-29002862 None:intergenic 40.0%
TGAAGAGATTTCTGCCCAAA+AGG - Chr4:29006321-29006340 MsG0480019889.01.T01:intron 40.0%
TGGTTTCAATGGCTATGGAT+CGG + Chr4:29009963-29009982 None:intergenic 40.0%
TGTCTGGTGTGCATAGAAAT+AGG + Chr4:29004319-29004338 None:intergenic 40.0%
TTAAACCAACCCTCTATGCA+TGG + Chr4:29008785-29008804 None:intergenic 40.0%
TTATCTTTGGCTACATCCTC+CGG - Chr4:29010606-29010625 MsG0480019889.01.T01:intron 40.0%
TTCAGTTTAGCAGTTCGGTT+CGG - Chr4:29002963-29002982 MsG0480019889.01.T01:CDS 40.0%
TTCGGTTCAGTTTAGCAGTT+CGG - Chr4:29002958-29002977 MsG0480019889.01.T01:CDS 40.0%
TTGGGTTATGCTGAACATGT+TGG + Chr4:29009555-29009574 None:intergenic 40.0%
! AAAGTACCTCAAACTCGCAA+AGG - Chr4:29007656-29007675 MsG0480019889.01.T01:intron 40.0%
! AGACTGAGTGTCTTGTTCAT+TGG - Chr4:29004412-29004431 MsG0480019889.01.T01:intron 40.0%
! AGCATTCTCATGTCATTTGG+AGG - Chr4:29004697-29004716 MsG0480019889.01.T01:intron 40.0%
! CCCTTTTTCTCAAACTCTCA+TGG + Chr4:29006998-29007017 None:intergenic 40.0%
! CCTTAACATACTCGCCTTTT+GGG + Chr4:29006338-29006357 None:intergenic 40.0%
! CTCTTCTCCTCTTCTCTTTT+AGG - Chr4:29005897-29005916 MsG0480019889.01.T01:intron 40.0%
! GGCCTTATATGCTGAAATTG+AGG - Chr4:29006088-29006107 MsG0480019889.01.T01:intron 40.0%
! TAATGAATTTGCTCACCTCC+TGG + Chr4:29011014-29011033 None:intergenic 40.0%
! TACACAATACGCACCCTTTT+TGG - Chr4:29008903-29008922 MsG0480019889.01.T01:CDS 40.0%
! TCCTTAACATACTCGCCTTT+TGG + Chr4:29006339-29006358 None:intergenic 40.0%
! TGGAGCATTCTCATGTCATT+TGG - Chr4:29004694-29004713 MsG0480019889.01.T01:intron 40.0%
! TTGTCCTTTCAGTTCGGTTT+TGG - Chr4:29002836-29002855 MsG0480019889.01.T01:three_prime_UTR 40.0%
!! TGCATAGAGGGTTGGTTTAA+TGG - Chr4:29008785-29008804 MsG0480019889.01.T01:CDS 40.0%
!!! ACGCGGTTAGGGTTTTAATT+TGG + Chr4:29005759-29005778 None:intergenic 40.0%
!!! ACTCTTTTTCGGCATTTTGG+AGG - Chr4:29005200-29005219 MsG0480019889.01.T01:intron 40.0%
!!! TCGACTCTTTTTCGGCATTT+TGG - Chr4:29005197-29005216 MsG0480019889.01.T01:intron 40.0%
!!! TGCATTTTGGCTTCTGTTTG+CGG + Chr4:29003868-29003887 None:intergenic 40.0%
AAAGAGAAGAGGAGAAGAGC+TGG + Chr4:29005896-29005915 None:intergenic 45.0%
AACCTCTTCGTAGACAGGTT+GGG + Chr4:29005072-29005091 None:intergenic 45.0%
AATGTCTTCCATCGTAGGAG+TGG - Chr4:29010100-29010119 MsG0480019889.01.T01:intron 45.0%
AATTGTCACACGGGAGTAGA+TGG - Chr4:29008959-29008978 MsG0480019889.01.T01:CDS 45.0%
ACATAGGCTTGCATTAGCGT+TGG + Chr4:29010345-29010364 None:intergenic 45.0%
ACTTTGCCATGACGATTAGC+AGG + Chr4:29007641-29007660 None:intergenic 45.0%
AGAAGAAGGAGGTTGTTGGT+TGG - Chr4:29002684-29002703 MsG0480019889.01.T01:three_prime_UTR 45.0%
AGAGGCTCAATCATAGTAGG+AGG + Chr4:29004867-29004886 None:intergenic 45.0%
AGCAAGGAGAATTGTCACAC+GGG - Chr4:29008950-29008969 MsG0480019889.01.T01:CDS 45.0%
AGGTTATTGTTGAGCAGCAG+CGG - Chr4:29005087-29005106 MsG0480019889.01.T01:intron 45.0%
AGGTTGGGAACTGTGTACTT+AGG + Chr4:29005057-29005076 None:intergenic 45.0%
ATGTCCTTACCCAACAGCAA+AGG - Chr4:29004930-29004949 MsG0480019889.01.T01:intron 45.0%
ATGTTGCGGATGCTATTGGA+AGG + Chr4:29002639-29002658 None:intergenic 45.0%
CACACCAGACAAGAGAAATG+GGG - Chr4:29004328-29004347 MsG0480019889.01.T01:intron 45.0%
CATAGTAGGAGGTCTAGGAA+TGG + Chr4:29004856-29004875 None:intergenic 45.0%
CCCAAAAGGCGAGTATGTTA+AGG - Chr4:29006335-29006354 MsG0480019889.01.T01:intron 45.0%
CGTCTTATGATTCTGCTGCA+AGG + Chr4:29006726-29006745 None:intergenic 45.0%
CTGTGTGACTTAACTCACAC+AGG + Chr4:29005616-29005635 None:intergenic 45.0%
CTTTCATCAACCAGTTGGCT+TGG - Chr4:29006067-29006086 MsG0480019889.01.T01:intron 45.0%
GAAGACATTGACACTGCGAT+GGG + Chr4:29010089-29010108 None:intergenic 45.0%
GACTATTCACCACACACGTT+TGG + Chr4:29003080-29003099 None:intergenic 45.0%
GAGAAGAAGAAGGAGGTTGT+TGG - Chr4:29002680-29002699 MsG0480019889.01.T01:three_prime_UTR 45.0%
GCACACCAGACAAGAGAAAT+GGG - Chr4:29004327-29004346 MsG0480019889.01.T01:intron 45.0%
GCTAATCACTGTGTTCAAGC+AGG + Chr4:29009333-29009352 None:intergenic 45.0%
GCTGTAATAATAGTGACCGG+AGG + Chr4:29010625-29010644 None:intergenic 45.0%
GGAACTGTGTACTTAGGAAC+GGG + Chr4:29005051-29005070 None:intergenic 45.0%
GGATCAGTTGAACATCTGTC+GGG + Chr4:29008862-29008881 None:intergenic 45.0%
GGGAACTGTGTACTTAGGAA+CGG + Chr4:29005052-29005071 None:intergenic 45.0%
GGTTTCCATCTACCCACATA+CGG + Chr4:29004632-29004651 None:intergenic 45.0%
GTGTCAATGTCTTCCATCGT+AGG - Chr4:29010095-29010114 MsG0480019889.01.T01:intron 45.0%
GTGTGAGTTAAGTCACACAG+TGG - Chr4:29005616-29005635 MsG0480019889.01.T01:intron 45.0%
GTTGTGGGACCCACAAAATT+TGG - Chr4:29004283-29004302 MsG0480019889.01.T01:intron 45.0%
GTTTCCATCTACCCACATAC+GGG + Chr4:29004631-29004650 None:intergenic 45.0%
TAACCTCTTCGTAGACAGGT+TGG + Chr4:29005073-29005092 None:intergenic 45.0%
TACCAGCATACGTCCTGAAA+AGG + Chr4:29004750-29004769 None:intergenic 45.0%
TCAGAGTGGAGAATGCAATG+TGG - Chr4:29005154-29005173 MsG0480019889.01.T01:intron 45.0%
TCCTCCCGTTGTAGTGTTAA+TGG + Chr4:29008657-29008676 None:intergenic 45.0%
TCGATTCCTGCTAATCGTCA+TGG - Chr4:29007632-29007651 MsG0480019889.01.T01:intron 45.0%
TGATTGCCACTGCAAGTGTT+TGG - Chr4:29006667-29006686 MsG0480019889.01.T01:intron 45.0%
TGCAATGTGGATTCCTGATG+TGG - Chr4:29005167-29005186 MsG0480019889.01.T01:intron 45.0%
TGCACACCAGACAAGAGAAA+TGG - Chr4:29004326-29004345 MsG0480019889.01.T01:intron 45.0%
TGCATGAGTTAACTCACGCA+GGG + Chr4:29003614-29003633 None:intergenic 45.0%
TGTCCTTACCCAACAGCAAA+GGG - Chr4:29004931-29004950 MsG0480019889.01.T01:intron 45.0%
TTCCAATAGCATCCGCAACA+TGG - Chr4:29002638-29002657 MsG0480019889.01.T01:three_prime_UTR 45.0%
! AATGATTTTTCACGGCCGAG+AGG + Chr4:29008883-29008902 None:intergenic 45.0%
! CAGTTGGAGCGAGCAATTTT+TGG + Chr4:29003576-29003595 None:intergenic 45.0%
! TAAGTCACGCAGGAAGTGTA+AGG + Chr4:29003637-29003656 None:intergenic 45.0%
!! ACCCCACTAGATTTGCTGAA+AGG + Chr4:29003448-29003467 None:intergenic 45.0%
!! AGAGGGTTGGTTTAATGGCA+TGG - Chr4:29008790-29008809 MsG0480019889.01.T01:CDS 45.0%
!! ATACACCATCCTAGCTTTGC+CGG + Chr4:29004790-29004809 None:intergenic 45.0%
!! CAGTTTGTTGGAGATGGTTC+AGG - Chr4:29002780-29002799 MsG0480019889.01.T01:three_prime_UTR 45.0%
!! GCATCTCAGTTTGTTGGAGA+TGG - Chr4:29002774-29002793 MsG0480019889.01.T01:three_prime_UTR 45.0%
!! TTGGAGCGAGCAATTTTTGG+TGG + Chr4:29003573-29003592 None:intergenic 45.0%
!! TTTGCTGTTGGGTAAGGACA+TGG + Chr4:29004931-29004950 None:intergenic 45.0%
!!! GCATTTTGGCTTCTGTTTGC+GGG + Chr4:29003867-29003886 None:intergenic 45.0%
!!! TGGAGCGAGCAATTTTTGGT+GGG + Chr4:29003572-29003591 None:intergenic 45.0%
!! AAATAAAAAAATTAGAATTA+GGG + Chr4:29007549-29007568 None:intergenic 5.0%
!!! GATTTTAATTTTTTTATATT+TGG - Chr4:29010971-29010990 MsG0480019889.01.T01:intron 5.0%
AAGCAAGAAGCAGTGTCACG+TGG + Chr4:29009850-29009869 None:intergenic 50.0%
AATAGCATCCGCAACATGGC+AGG - Chr4:29002642-29002661 MsG0480019889.01.T01:three_prime_UTR 50.0%
ACATCAGACAGCTCATTCCG+AGG - Chr4:29004576-29004595 MsG0480019889.01.T01:intron 50.0%
ACTGGAGATGGTCGATCATG+CGG - Chr4:29002709-29002728 MsG0480019889.01.T01:three_prime_UTR 50.0%
ACTGTAGCTACAAAGGACGG+TGG - Chr4:29011060-29011079 MsG0480019889.01.T01:CDS 50.0%
AGACAAAGGCCATCAGGAGA+TGG + Chr4:29006825-29006844 None:intergenic 50.0%
AGATGGTTCGATCGCGACAA+AGG - Chr4:29002748-29002767 MsG0480019889.01.T01:three_prime_UTR 50.0%
AGCAAGAAGCAGTGTCACGT+GGG + Chr4:29009849-29009868 None:intergenic 50.0%
AGCAGCGACTGTAGCTACAA+AGG - Chr4:29011053-29011072 MsG0480019889.01.T01:intron 50.0%
AGGAGTGGATGCATTCAGTG+AGG - Chr4:29004975-29004994 MsG0480019889.01.T01:intron 50.0%
AGGATGGTGTATCACTTGCC+CGG - Chr4:29004798-29004817 MsG0480019889.01.T01:intron 50.0%
AGGGGTGGTTTCAATGGCTA+TGG + Chr4:29009968-29009987 None:intergenic 50.0%
ATGGAGAGCGAACTCCAAGA+AGG + Chr4:29004912-29004931 None:intergenic 50.0%
ATGTTGCCGATGACCTGGAT+GGG + Chr4:29005129-29005148 None:intergenic 50.0%
CAGAGGTGGTATTGCCTTCT+TGG - Chr4:29004895-29004914 MsG0480019889.01.T01:intron 50.0%
CTATACCTCCTGCCATGTTG+CGG + Chr4:29002653-29002672 None:intergenic 50.0%
CTCTGCTATCCATCTCCTGA+TGG - Chr4:29006813-29006832 MsG0480019889.01.T01:intron 50.0%
GATGCCCCATTTCTCTTGTC+TGG + Chr4:29004335-29004354 None:intergenic 50.0%
GCAGTGAGAGCAATTGAACC+AGG - Chr4:29005950-29005969 MsG0480019889.01.T01:intron 50.0%
GCATATAAGGCCAAGCCAAC+TGG + Chr4:29006080-29006099 None:intergenic 50.0%
GCATGAGTTAACTCACGCAG+GGG + Chr4:29003613-29003632 None:intergenic 50.0%
GCCATTAACACTACAACGGG+AGG - Chr4:29008653-29008672 MsG0480019889.01.T01:intron 50.0%
GCGACTGTAGCTACAAAGGA+CGG - Chr4:29011057-29011076 MsG0480019889.01.T01:intron 50.0%
GGAAGACATTGACACTGCGA+TGG + Chr4:29010090-29010109 None:intergenic 50.0%
GGTCAAAGACAAAGGCCATC+AGG + Chr4:29006831-29006850 None:intergenic 50.0%
GGTTATTGTTGAGCAGCAGC+GGG - Chr4:29005088-29005107 MsG0480019889.01.T01:intron 50.0%
GTCCTTACCCAACAGCAAAG+GGG - Chr4:29004932-29004951 MsG0480019889.01.T01:intron 50.0%
GTGCATGAGTTAACTCACGC+AGG + Chr4:29003615-29003634 None:intergenic 50.0%
GTGTGGACACCATGCATAGA+GGG - Chr4:29008773-29008792 MsG0480019889.01.T01:intron 50.0%
TAGACACTTCAGACTCGGGA+TGG - Chr4:29004665-29004684 MsG0480019889.01.T01:intron 50.0%
TCAATGGCTATGGATCGGTG+TGG + Chr4:29009958-29009977 None:intergenic 50.0%
TCTGCGACTGATCACAGACA+TGG - Chr4:29005562-29005581 MsG0480019889.01.T01:intron 50.0%
TCTGTGATCAGTCGCAGAAC+AGG + Chr4:29005560-29005579 None:intergenic 50.0%
TGCCATGTTGCGGATGCTAT+TGG + Chr4:29002643-29002662 None:intergenic 50.0%
TGGCGTGAGTTAACTCAAGC+AGG - Chr4:29005582-29005601 MsG0480019889.01.T01:intron 50.0%
TGGTGTATATCCCTGCTGCA+AGG + Chr4:29006449-29006468 None:intergenic 50.0%
TGTACTTAGGAACGGGAGCA+GGG + Chr4:29005044-29005063 None:intergenic 50.0%
TGTGTGGACACCATGCATAG+AGG - Chr4:29008772-29008791 MsG0480019889.01.T01:intron 50.0%
TTCCCAACCTGTCTACGAAG+AGG - Chr4:29005067-29005086 MsG0480019889.01.T01:intron 50.0%
! ACGAGACGTGACACCTTTTC+AGG - Chr4:29004734-29004753 MsG0480019889.01.T01:intron 50.0%
!! AGATGGTTCAGGTTGTGCGA+TGG - Chr4:29002791-29002810 MsG0480019889.01.T01:three_prime_UTR 50.0%
!! CACCTTTTCAGGACGTATGC+TGG - Chr4:29004745-29004764 MsG0480019889.01.T01:intron 50.0%
!! GAAAAGGTGTCACGTCTCGT+CGG + Chr4:29004734-29004753 None:intergenic 50.0%
!! TCGGCATTTTGGAGGACATC+CGG - Chr4:29005208-29005227 MsG0480019889.01.T01:intron 50.0%
!! TGTTGGTTGGTGACTGGAGA+TGG - Chr4:29002697-29002716 MsG0480019889.01.T01:three_prime_UTR 50.0%
ACAGCACCAGAGTCTGCAAG+TGG - Chr4:29011101-29011120 MsG0480019889.01.T01:CDS 55.0%
ACATAGCACGCAACCACCAC+CGG - Chr4:29005798-29005817 MsG0480019889.01.T01:intron 55.0%
ACCACCTCTGCTAGCTCAAG+AGG + Chr4:29004885-29004904 None:intergenic 55.0%
ACGTATGCTGGTACTCCGGA+TGG - Chr4:29004757-29004776 MsG0480019889.01.T01:intron 55.0%
AGAAGCAGCCCTACAGACCT+TGG - Chr4:29010004-29010023 MsG0480019889.01.T01:intron 55.0%
AGCCAGCACCTCCTCAAACA+CGG + Chr4:29005244-29005263 None:intergenic 55.0%
AGGACCCGTATGTGGGTAGA+TGG - Chr4:29004624-29004643 MsG0480019889.01.T01:intron 55.0%
AGGTCTGTAGGGCTGCTTCT+AGG + Chr4:29010004-29010023 None:intergenic 55.0%
ATAAGACCCTGCTACTCCCC+TGG + Chr4:29005288-29005307 None:intergenic 55.0%
CAGACTCGGGATGGAATCGA+TGG - Chr4:29004674-29004693 MsG0480019889.01.T01:intron 55.0%
CAGGACGTATGCTGGTACTC+CGG - Chr4:29004753-29004772 MsG0480019889.01.T01:intron 55.0%
CAGGGCCGATCATAAGAGGA+TGG + Chr4:29005026-29005045 None:intergenic 55.0%
CAGTGTCACGTGGGAGTAGA+TGG + Chr4:29009840-29009859 None:intergenic 55.0%
CGGCAACATCAGAGTCAGAG+TGG - Chr4:29005140-29005159 MsG0480019889.01.T01:intron 55.0%
CTCTGATGTTGCCGATGACC+TGG + Chr4:29005134-29005153 None:intergenic 55.0%
CTGGTACTCCGGATGGATCA+TGG - Chr4:29004764-29004783 MsG0480019889.01.T01:intron 55.0%
GACATTGACACTGCGATGGG+AGG + Chr4:29010086-29010105 None:intergenic 55.0%
GATGTTGCCGATGACCTGGA+TGG + Chr4:29005130-29005149 None:intergenic 55.0%
GATTGGGAGGACCCGTATGT+GGG - Chr4:29004617-29004636 MsG0480019889.01.T01:intron 55.0%
GCACAGAGGGGTGGTTTCAA+TGG + Chr4:29009974-29009993 None:intergenic 55.0%
GCTCAGATCGGTGACGAAGA+TGG - Chr4:29002731-29002750 MsG0480019889.01.T01:three_prime_UTR 55.0%
GCTTCCTCTCCTCTCTCAGT+CGG - Chr4:29005866-29005885 MsG0480019889.01.T01:intron 55.0%
GGACACCATGCATAGAGGGT+TGG - Chr4:29008777-29008796 MsG0480019889.01.T01:CDS 55.0%
GTCGATCATGCGGCTCAGAT+CGG - Chr4:29002719-29002738 MsG0480019889.01.T01:three_prime_UTR 55.0%
GTGTACTTAGGAACGGGAGC+AGG + Chr4:29005045-29005064 None:intergenic 55.0%
TACTCCGGATGGATCATGGC+CGG - Chr4:29004768-29004787 MsG0480019889.01.T01:intron 55.0%
TCTGCACCACTTGCAGACTC+TGG + Chr4:29011110-29011129 None:intergenic 55.0%
TCTGCTGCAAGGCTTCCTAG+AGG + Chr4:29006715-29006734 None:intergenic 55.0%
TGAAACCACCCCTCTGTGCA+CGG - Chr4:29009975-29009994 MsG0480019889.01.T01:intron 55.0%
TGAGAGAGGAGAGGAAGCGA+CGG + Chr4:29005864-29005883 None:intergenic 55.0%
TGAGCCTCTTGAGCTAGCAG+AGG - Chr4:29004878-29004897 MsG0480019889.01.T01:intron 55.0%
TGATTGGGAGGACCCGTATG+TGG - Chr4:29004616-29004635 MsG0480019889.01.T01:intron 55.0%
TGCTTAGGAGTGACACCCTC+TGG + Chr4:29010724-29010743 None:intergenic 55.0%
TGGCTTCTGTTTGCGGGCAT+AGG + Chr4:29003861-29003880 None:intergenic 55.0%
TGGGAGACTCCAAACGTGTG+TGG - Chr4:29003068-29003087 MsG0480019889.01.T01:intron 55.0%
TTCATGGGAGCCTTGCAGCA+GGG - Chr4:29006436-29006455 MsG0480019889.01.T01:CDS 55.0%
TTTCATGGGAGCCTTGCAGC+AGG - Chr4:29006435-29006454 MsG0480019889.01.T01:CDS 55.0%
TTTGCCGGCCATGATCCATC+CGG + Chr4:29004775-29004794 None:intergenic 55.0%
! GAGCTGATGACACGCCCTTT+TGG + Chr4:29009898-29009917 None:intergenic 55.0%
! TACCGTGTTTGAGGAGGTGC+TGG - Chr4:29005239-29005258 MsG0480019889.01.T01:intron 55.0%
! TCTAGGACACCGTGCACAGA+GGG + Chr4:29009987-29010006 None:intergenic 55.0%
!! CACCCCTTTGCTGTTGGGTA+AGG + Chr4:29004937-29004956 None:intergenic 55.0%
!! GGAGGTTGTTGGTTGGTGAC+TGG - Chr4:29002691-29002710 MsG0480019889.01.T01:three_prime_UTR 55.0%
!! TTCTAGGACACCGTGCACAG+AGG + Chr4:29009988-29010007 None:intergenic 55.0%
ACTGCCTTAGAACCCGCTCC+GGG + Chr4:29004819-29004838 None:intergenic 60.0%
AGACATCCTCCGACCCATCC+AGG - Chr4:29005113-29005132 MsG0480019889.01.T01:intron 60.0%
AGCATCCGCAACATGGCAGG+AGG - Chr4:29002645-29002664 MsG0480019889.01.T01:three_prime_UTR 60.0%
CATGGCCGGCAAAGCTAGGA+TGG - Chr4:29004782-29004801 MsG0480019889.01.T01:intron 60.0%
CCAACAGCAAAGGGGTGACC+CGG - Chr4:29004940-29004959 MsG0480019889.01.T01:intron 60.0%
CTAGGACACCGTGCACAGAG+GGG + Chr4:29009986-29010005 None:intergenic 60.0%
CTCCGACCCATCCAGGTCAT+CGG - Chr4:29005120-29005139 MsG0480019889.01.T01:intron 60.0%
CTGACCGACTGAGAGAGGAG+AGG + Chr4:29005873-29005892 None:intergenic 60.0%
GACTGCCTTAGAACCCGCTC+CGG + Chr4:29004820-29004839 None:intergenic 60.0%
GATTGCAGCAGCAGCAGGAC+CGG + Chr4:29005820-29005839 None:intergenic 60.0%
GCCTCTTGAGCTAGCAGAGG+TGG - Chr4:29004881-29004900 MsG0480019889.01.T01:intron 60.0%
GGAGCAGGGCCGATCATAAG+AGG + Chr4:29005030-29005049 None:intergenic 60.0%
GGATCATGGCCGGCAAAGCT+AGG - Chr4:29004778-29004797 MsG0480019889.01.T01:intron 60.0%
GGTGTATCACTTGCCCGGAG+CGG - Chr4:29004803-29004822 MsG0480019889.01.T01:intron 60.0%
GTGTATCACTTGCCCGGAGC+GGG - Chr4:29004804-29004823 MsG0480019889.01.T01:intron 60.0%
TGCCGATGACCTGGATGGGT+CGG + Chr4:29005125-29005144 None:intergenic 60.0%
TGGATGGGTCGGAGGATGTC+TGG + Chr4:29005114-29005133 None:intergenic 60.0%
!! CGGGTCACCCCTTTGCTGTT+GGG + Chr4:29004942-29004961 None:intergenic 60.0%
!! GGAGCGGGTTCTAAGGCAGT+CGG - Chr4:29004819-29004838 MsG0480019889.01.T01:intron 60.0%
!! TTGAGGAGGTGCTGGCTCCA+CGG - Chr4:29005247-29005266 MsG0480019889.01.T01:intron 60.0%
AGGGGTCCAGGGGAGTAGCA+GGG - Chr4:29005279-29005298 MsG0480019889.01.T01:intron 65.0%
CGATGACCTGGATGGGTCGG+AGG + Chr4:29005122-29005141 None:intergenic 65.0%
GAGGAGGAGTAGGGGTCCAG+GGG - Chr4:29005269-29005288 MsG0480019889.01.T01:intron 65.0%
GCAAAGGGGTGACCCGGTCT+CGG - Chr4:29004946-29004965 MsG0480019889.01.T01:intron 65.0%
GCTCCACGGAGGAGGAGTAG+GGG - Chr4:29005261-29005280 MsG0480019889.01.T01:intron 65.0%
GCTGGCTGACCGACTGAGAG+AGG + Chr4:29005878-29005897 None:intergenic 65.0%
GGAAGCGACGGCAGACGGTT+CGG + Chr4:29005852-29005871 None:intergenic 65.0%
GGAGAGGAAGCGACGGCAGA+CGG + Chr4:29005857-29005876 None:intergenic 65.0%
GGAGGAGGAGTAGGGGTCCA+GGG - Chr4:29005268-29005287 MsG0480019889.01.T01:intron 65.0%
GGCTCCACGGAGGAGGAGTA+GGG - Chr4:29005260-29005279 MsG0480019889.01.T01:intron 65.0%
TAGGGGTCCAGGGGAGTAGC+AGG - Chr4:29005278-29005297 MsG0480019889.01.T01:intron 65.0%
TGGCTCCACGGAGGAGGAGT+AGG - Chr4:29005259-29005278 MsG0480019889.01.T01:intron 65.0%
! CCGGGTCACCCCTTTGCTGT+TGG + Chr4:29004943-29004962 None:intergenic 65.0%
! CTTGCCCGGAGCGGGTTCTA+AGG - Chr4:29004812-29004831 MsG0480019889.01.T01:intron 65.0%
!! ACGGCAGACGGTTCGGTGGT+GGG + Chr4:29005845-29005864 None:intergenic 65.0%
!! GGGTGGATTGCAGCAGCAGC+AGG + Chr4:29005825-29005844 None:intergenic 65.0%
AAGGGGTGACCCGGTCTCGG+AGG - Chr4:29004949-29004968 MsG0480019889.01.T01:intron 70.0%
ACTCCTCGCCCTCCGAGACC+GGG + Chr4:29004961-29004980 None:intergenic 70.0%
AGCAGCAGCAGGACCGGTGG+TGG + Chr4:29005814-29005833 None:intergenic 70.0%
AGGGGTGACCCGGTCTCGGA+GGG - Chr4:29004950-29004969 MsG0480019889.01.T01:intron 70.0%
CACTCCTCGCCCTCCGAGAC+CGG + Chr4:29004962-29004981 None:intergenic 70.0%
CGGAGGAGGAGTAGGGGTCC+AGG - Chr4:29005267-29005286 MsG0480019889.01.T01:intron 70.0%
GGACACCGTGCACAGAGGGG+TGG + Chr4:29009983-29010002 None:intergenic 70.0%
GGACCCCTACTCCTCCTCCG+TGG + Chr4:29005267-29005286 None:intergenic 70.0%
TGCAGCAGCAGCAGGACCGG+TGG + Chr4:29005817-29005836 None:intergenic 70.0%
! AGCGACGGCAGACGGTTCGG+TGG + Chr4:29005849-29005868 None:intergenic 70.0%
!! AGGAGGTGCTGGCTCCACGG+AGG - Chr4:29005250-29005269 MsG0480019889.01.T01:intron 70.0%
!! AGGTGCTGGCTCCACGGAGG+AGG - Chr4:29005253-29005272 MsG0480019889.01.T01:intron 70.0%
!! GACGGCAGACGGTTCGGTGG+TGG + Chr4:29005846-29005865 None:intergenic 70.0%
!! GCAGACGGTTCGGTGGTGGG+TGG + Chr4:29005842-29005861 None:intergenic 70.0%
CGGTCTCGGAGGGCGAGGAG+TGG - Chr4:29004960-29004979 MsG0480019889.01.T01:intron 75.0%
TGACCCGGTCTCGGAGGGCG+AGG - Chr4:29004955-29004974 MsG0480019889.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 29002615 29011452 29002615 ID=MsG0480019889.01;Name=MsG0480019889.01
Chr4 mRNA 29002615 29011452 29002615 ID=MsG0480019889.01.T01;Parent=MsG0480019889.01;Name=MsG0480019889.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0.28|0.37|0.62|0.71|0.75|8|312|441
Chr4 exon 29002615 29003052 29002615 ID=MsG0480019889.01.T01:exon:9598;Parent=MsG0480019889.01.T01
Chr4 exon 29006256 29006308 29006256 ID=MsG0480019889.01.T01:exon:9597;Parent=MsG0480019889.01.T01
Chr4 exon 29006390 29006491 29006390 ID=MsG0480019889.01.T01:exon:9596;Parent=MsG0480019889.01.T01
Chr4 exon 29007784 29007842 29007784 ID=MsG0480019889.01.T01:exon:9595;Parent=MsG0480019889.01.T01
Chr4 exon 29008775 29009090 29008775 ID=MsG0480019889.01.T01:exon:9594;Parent=MsG0480019889.01.T01
Chr4 exon 29009149 29009507 29009149 ID=MsG0480019889.01.T01:exon:9593;Parent=MsG0480019889.01.T01
Chr4 exon 29011059 29011151 29011059 ID=MsG0480019889.01.T01:exon:9592;Parent=MsG0480019889.01.T01
Chr4 exon 29011235 29011452 29011235 ID=MsG0480019889.01.T01:exon:9591;Parent=MsG0480019889.01.T01
Chr4 CDS 29011235 29011452 29011235 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29011059 29011151 29011059 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29009149 29009507 29009149 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29008775 29009090 29008775 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29007784 29007842 29007784 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29006390 29006491 29006390 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29006256 29006308 29006256 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 CDS 29002927 29003052 29002927 ID=MsG0480019889.01.T01:cds;Parent=MsG0480019889.01.T01
Chr4 three_prime_UTR 29002615 29002926 29002615 ID=MsG0480019889.01.T01:three_prime_utr;Parent=MsG0480019889.01.T01
Gene Sequence

>MsG0480019889.01.T01

ATGCGACAACGCAACAACTCACCTTCCAATAGCATCCGCAACATGGCAGGAGGTATAGCTAGAATGAGAAGAAGAAGGAGGTTGTTGGTTGGTGACTGGAGATGGTCGATCATGCGGCTCAGATCGGTGACGAAGATGGTTCGATCGCGACAAAGGAATGCATCTCAGTTTGTTGGAGATGGTTCAGGTTGTGCGATGGATATGTTTTTGCTTTCTAGTTCACTTCAAAACGCTTATGCACCAATTCGGTTTAATATTGGTTCGGTTCAGTTTAGCAGTTCGGTTCGGTTTAACACTTTAATATTGGTTCGGGATGAGTTTTTGCTCACATCAGACAGCTCATTCCGAGGAAGCCTTATGAAGATTATGATTGGGAGGACCCGTATGTGGGTAGATGGAAACCTTCTAGCTGATGTTAGACACTTCAGACTCGGGATGGAATCGATGGAGCATTCTCATGTCATTTGGAGGTCGTACGAGCACCGACGAGACGTGACACCTTTTCAGGACGTATGCTGGTACTCCGGATGGATCATGGCCGGCAAAGCTAGGATGGTGTATCACTTGCCCGGAGCGGGTTCTAAGGCAGTCGGCTATGTTCAGACCATTCCTAGACCTCCTACTATGATTGAGCCTCTTGAGCTAGCAGAGGTGGTATTGCCTTCTTGGAGAGTGGATGCATTCAGTGAGGTAGATGAATGGTTCTACCGTGTATGCCATCCTCTTATGATCGGCCCTGCTCCCGTTCCTAAGTACACAGTTCCCAACCTGTCTACGAAGAGGTTATTGTTGAGCAGCAGCGGGCCAGACATCCTCCGACCCATCCAGGTCATCGGCAACATCAGAGTCAGAGTGGAGAATGCAATGTGGATTCCTGATGTGGTTTTAAATCGACTCTTTTTCGGCATTTTGGAGGACATCCGGTCCAATTATACCGTGTTTGAGGAGGTGCTGGCTCCACGGAGGAGGAGTAGGGGTCCAGGGGAGTTATATAATAGGAAGATATTTGTGTTTATTTATACTTCATTGTTAGCTGAGTTTACTAAAGCAAAAAGAATGACGCAGAAATCAAAACTTTTCAAGGGCCAAACTAAGAAGAAATCGATTCCTGCTAATCGTCATGGCAAAGTACCTCAAACTCGCAAAGGGAAGAGATTTGTGAAGCCAACGAAAGTTACAAAGGATATGGATGCTGATCGTGAGGTGAGCAAATTCATTAACCATTGCAATGAAGTTAAAGCAGCGACTGTAGCTACAAAGGACGGTGGTTATCTAAGCATTGTTAGACAGCACCAGAGTCTGCAAGTGGTGCAGAAAAATAGTTAG
Protein sequence

>MsG0480019889.01.T01

MRQRNNSPSNSIRNMAGGIARMRRRRRLLVGDWRWSIMRLRSVTKMVRSRQRNASQFVGDGSGCAMDMFLLSSSLQNAYAPIRFNIGSVQFSSSVRFNTLILVRDEFLLTSDSSFRGSLMKIMIGRTRMWVDGNLLADVRHFRLGMESMEHSHVIWRSYEHRRDVTPFQDVCWYSGWIMAGKARMVYHLPGAGSKAVGYVQTIPRPPTMIEPLELAEVVLPSWRVDAFSEVDEWFYRVCHPLMIGPAPVPKYTVPNLSTKRLLLSSSGPDILRPIQVIGNIRVRVENAMWIPDVVLNRLFFGILEDIRSNYTVFEEVLAPRRRSRGPGELYNRKIFVFIYTSLLAEFTKAKRMTQKSKLFKGQTKKKSIPANRHGKVPQTRKGKRFVKPTKVTKDMDADREVSKFINHCNEVKAATVATKDGGYLSIVRQHQSLQVVQKNS*