Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029300.01.T01 | RHN64671.1 | 52.5 | 80 | 16 | 2 | 1 | 58 | 1 | 80 | 1.26E-15 | 76.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029300.01.T01 | P38385 | 58.929 | 56 | 23 | 0 | 1 | 56 | 1 | 56 | 4.52E-15 | 65.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029300.01.T01 | A0A396IIG8 | 52.500 | 80 | 16 | 2 | 1 | 58 | 1 | 80 | 6.00e-16 | 76.3 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0580029300.01 | 0.805498 | 1.296585e-49 | 6.870092e-47 |
MsG0080048197.01 | MsG0580029300.01 | 0.856205 | 3.766335e-62 | 8.919530e-59 |
MsG0080048383.01 | MsG0580029300.01 | 0.831229 | 1.879031e-55 | 2.026385e-52 |
MsG0080048687.01 | MsG0580029300.01 | 0.829601 | 4.700020e-55 | 4.833227e-52 |
MsG0080048770.01 | MsG0580029300.01 | 0.800465 | 1.423351e-48 | 6.631763e-46 |
MsG0080048843.01 | MsG0580029300.01 | 0.809371 | 1.955741e-50 | 1.146259e-47 |
MsG0080048968.01 | MsG0580029300.01 | 0.886441 | 3.411026e-72 | 2.436981e-68 |
MsG0080048971.01 | MsG0580029300.01 | 0.818728 | 1.684994e-52 | 1.271374e-49 |
MsG0180000023.01 | MsG0580029300.01 | 0.819438 | 1.161641e-52 | 8.938924e-50 |
MsG0180000055.01 | MsG0580029300.01 | 0.839983 | 1.142776e-57 | 1.605203e-54 |
MsG0180000153.01 | MsG0580029300.01 | 0.803138 | 4.022922e-49 | 2.006031e-46 |
MsG0180000318.01 | MsG0580029300.01 | -0.804273 | 2.338283e-49 | 1.200486e-46 |
MsG0180000339.01 | MsG0580029300.01 | 0.875695 | 2.515048e-68 | 1.185787e-64 |
MsG0180000611.01 | MsG0580029300.01 | 0.853670 | 2.049624e-61 | 4.462748e-58 |
MsG0180000614.01 | MsG0580029300.01 | 0.809095 | 2.240979e-50 | 1.303776e-47 |
MsG0180000799.01 | MsG0580029300.01 | 0.827380 | 1.615272e-54 | 1.556997e-51 |
MsG0180001043.01 | MsG0580029300.01 | 0.851741 | 7.285096e-61 | 1.488996e-57 |
MsG0180001260.01 | MsG0580029300.01 | 0.800687 | 1.282134e-48 | 6.007686e-46 |
MsG0180001355.01 | MsG0580029300.01 | 0.807143 | 5.837342e-50 | 3.226396e-47 |
MsG0180001599.01 | MsG0580029300.01 | 0.848283 | 6.763647e-60 | 1.235059e-56 |
MsG0180002283.01 | MsG0580029300.01 | 0.835467 | 1.649848e-56 | 2.019263e-53 |
MsG0180002441.01 | MsG0580029300.01 | 0.801248 | 9.849145e-49 | 4.681153e-46 |
MsG0180002489.01 | MsG0580029300.01 | 0.866919 | 2.003861e-65 | 6.869930e-62 |
MsG0180002491.01 | MsG0580029300.01 | 0.867673 | 1.151015e-65 | 4.052010e-62 |
MsG0180003409.01 | MsG0580029300.01 | 0.806143 | 9.490908e-50 | 5.112829e-47 |
MsG0180003627.01 | MsG0580029300.01 | 0.836394 | 9.601867e-57 | 1.208461e-53 |
MsG0180003744.01 | MsG0580029300.01 | 0.812388 | 4.348553e-51 | 2.761178e-48 |
MsG0180003793.01 | MsG0580029300.01 | 0.870956 | 9.858254e-67 | 3.907479e-63 |
MsG0180003984.01 | MsG0580029300.01 | 0.802211 | 6.247297e-49 | 3.042527e-46 |
MsG0180004009.01 | MsG0580029300.01 | 0.802264 | 6.091369e-49 | 2.970710e-46 |
MsG0180004016.01 | MsG0580029300.01 | 0.839822 | 1.258827e-57 | 1.759123e-54 |
MsG0180004128.01 | MsG0580029300.01 | 0.852657 | 3.997028e-61 | 8.411359e-58 |
MsG0180004129.01 | MsG0580029300.01 | 0.830910 | 2.249971e-55 | 2.403836e-52 |
MsG0180004130.01 | MsG0580029300.01 | 0.871902 | 4.796345e-67 | 1.967125e-63 |
MsG0180004335.01 | MsG0580029300.01 | -0.821287 | 4.375209e-53 | 3.544440e-50 |
MsG0180004481.01 | MsG0580029300.01 | 0.818580 | 1.819846e-52 | 1.367543e-49 |
MsG0180004482.01 | MsG0580029300.01 | 0.808136 | 3.592666e-50 | 2.037931e-47 |
MsG0180004509.01 | MsG0580029300.01 | 0.802535 | 5.358238e-49 | 2.631165e-46 |
MsG0180004767.01 | MsG0580029300.01 | 0.898353 | 5.766151e-77 | 6.789974e-73 |
MsG0180004854.01 | MsG0580029300.01 | 0.820648 | 6.137391e-53 | 4.884143e-50 |
MsG0180004991.01 | MsG0580029300.01 | 0.809598 | 1.748406e-50 | 1.030959e-47 |
MsG0180005125.01 | MsG0580029300.01 | 0.809199 | 2.129660e-50 | 1.242471e-47 |
MsG0180005268.01 | MsG0580029300.01 | 0.822463 | 2.337118e-53 | 1.957583e-50 |
MsG0180005765.01 | MsG0580029300.01 | 0.816104 | 6.567089e-52 | 4.611140e-49 |
MsG0180006013.01 | MsG0580029300.01 | 0.886157 | 4.367100e-72 | 3.084064e-68 |
MsG0180006016.01 | MsG0580029300.01 | 0.820284 | 7.438867e-53 | 5.860878e-50 |
MsG0280006406.01 | MsG0580029300.01 | 0.849247 | 3.654823e-60 | 6.887264e-57 |
MsG0280006411.01 | MsG0580029300.01 | 0.833491 | 5.173148e-56 | 5.966899e-53 |
MsG0280010776.01 | MsG0580029300.01 | 0.815601 | 8.502817e-52 | 5.888881e-49 |
MsG0280010801.01 | MsG0580029300.01 | 0.873019 | 2.033009e-67 | 8.688163e-64 |
MsG0280011043.01 | MsG0580029300.01 | 0.809332 | 1.993824e-50 | 1.167334e-47 |
MsG0280011141.01 | MsG0580029300.01 | 0.869600 | 2.742993e-66 | 1.035341e-62 |
MsG0380011614.01 | MsG0580029300.01 | 0.830055 | 3.642164e-55 | 3.794842e-52 |
MsG0380012073.01 | MsG0580029300.01 | 0.871797 | 5.195326e-67 | 2.122985e-63 |
MsG0380014330.01 | MsG0580029300.01 | 0.866578 | 2.573370e-65 | 8.716468e-62 |
MsG0380014885.01 | MsG0580029300.01 | 0.827986 | 1.155399e-54 | 1.133450e-51 |
MsG0380014908.01 | MsG0580029300.01 | 0.841869 | 3.656629e-58 | 5.445813e-55 |
MsG0480018462.01 | MsG0580029300.01 | 0.801783 | 7.650753e-49 | 3.685655e-46 |
MsG0480018477.01 | MsG0580029300.01 | 0.851263 | 9.944331e-61 | 2.001453e-57 |
MsG0480018906.01 | MsG0580029300.01 | 0.808042 | 3.761714e-50 | 2.128490e-47 |
MsG0480019275.01 | MsG0580029300.01 | 0.852204 | 5.381609e-61 | 1.116219e-57 |
MsG0480019486.01 | MsG0580029300.01 | 0.802627 | 5.129346e-49 | 2.524707e-46 |
MsG0480019889.01 | MsG0580029300.01 | 0.803013 | 4.267920e-49 | 2.121357e-46 |
MsG0480020843.01 | MsG0580029300.01 | 0.810084 | 1.374211e-50 | 8.206753e-48 |
MsG0480021006.01 | MsG0580029300.01 | 0.828851 | 7.144309e-55 | 7.186237e-52 |
MsG0480021041.01 | MsG0580029300.01 | 0.803258 | 3.798993e-49 | 1.900236e-46 |
MsG0480021731.01 | MsG0580029300.01 | 0.801443 | 8.983441e-49 | 4.290671e-46 |
MsG0480021832.01 | MsG0580029300.01 | 0.902186 | 1.254371e-78 | 1.755255e-74 |
MsG0480021842.01 | MsG0580029300.01 | 0.836336 | 9.933258e-57 | 1.248108e-53 |
MsG0480021904.01 | MsG0580029300.01 | 0.836171 | 1.094022e-56 | 1.367813e-53 |
MsG0480021994.01 | MsG0580029300.01 | 0.847604 | 1.040773e-59 | 1.859741e-56 |
MsG0480022035.01 | MsG0580029300.01 | 0.816000 | 6.929744e-52 | 4.851821e-49 |
MsG0480022183.01 | MsG0580029300.01 | 0.820480 | 6.710181e-53 | 5.315430e-50 |
MsG0480022223.01 | MsG0580029300.01 | 0.813536 | 2.435505e-51 | 1.594779e-48 |
MsG0480022292.01 | MsG0580029300.01 | 0.840106 | 1.061936e-57 | 1.497278e-54 |
MsG0480022493.01 | MsG0580029300.01 | 0.835191 | 1.936926e-56 | 2.351159e-53 |
MsG0480022678.01 | MsG0580029300.01 | 0.827541 | 1.477672e-54 | 1.430762e-51 |
MsG0480022960.01 | MsG0580029300.01 | 0.811730 | 6.048720e-51 | 3.773276e-48 |
MsG0480023093.01 | MsG0580029300.01 | 0.813687 | 2.255972e-51 | 1.483259e-48 |
MsG0480023149.01 | MsG0580029300.01 | 0.894140 | 3.261829e-75 | 3.203017e-71 |
MsG0480023282.01 | MsG0580029300.01 | 0.828686 | 7.831009e-55 | 7.839918e-52 |
MsG0480023361.01 | MsG0580029300.01 | 0.827985 | 1.156205e-54 | 1.134210e-51 |
MsG0480023412.01 | MsG0580029300.01 | 0.830726 | 2.496058e-55 | 2.652230e-52 |
MsG0480023415.01 | MsG0580029300.01 | 0.825852 | 3.738525e-54 | 3.448351e-51 |
MsG0480023517.01 | MsG0580029300.01 | 0.818239 | 2.174784e-52 | 1.618864e-49 |
MsG0480023559.01 | MsG0580029300.01 | 0.871156 | 8.467639e-67 | 3.380589e-63 |
MsG0580024084.01 | MsG0580029300.01 | 0.816264 | 6.048177e-52 | 4.265492e-49 |
MsG0580024191.01 | MsG0580029300.01 | 0.808714 | 2.704481e-50 | 1.557429e-47 |
MsG0580024353.01 | MsG0580029300.01 | 0.802716 | 4.915999e-49 | 2.425296e-46 |
MsG0580024458.01 | MsG0580029300.01 | -0.816293 | 5.958633e-52 | 4.205766e-49 |
MsG0580024536.01 | MsG0580029300.01 | 0.826345 | 2.855033e-54 | 2.670452e-51 |
MsG0580025134.01 | MsG0580029300.01 | 0.877954 | 4.152147e-69 | 2.128798e-65 |
MsG0580025400.01 | MsG0580029300.01 | 0.847852 | 8.894138e-60 | 1.601865e-56 |
MsG0580025408.01 | MsG0580029300.01 | 0.806399 | 8.383894e-50 | 4.545862e-47 |
MsG0580025421.01 | MsG0580029300.01 | 0.845673 | 3.506636e-59 | 5.888780e-56 |
MsG0580025986.01 | MsG0580029300.01 | 0.803584 | 3.251425e-49 | 1.640153e-46 |
MsG0380015027.01 | MsG0580029300.01 | 0.808017 | 3.807350e-50 | 2.152923e-47 |
MsG0380015512.01 | MsG0580029300.01 | 0.822297 | 2.554045e-53 | 2.129256e-50 |
MsG0380015818.01 | MsG0580029300.01 | 0.870639 | 1.253827e-66 | 4.912153e-63 |
MsG0380015922.01 | MsG0580029300.01 | 0.823485 | 1.350787e-53 | 1.164597e-50 |
MsG0380016389.01 | MsG0580029300.01 | 0.857790 | 1.284118e-62 | 3.206498e-59 |
MsG0380016971.01 | MsG0580029300.01 | 0.811326 | 7.404863e-51 | 4.569814e-48 |
MsG0380017003.01 | MsG0580029300.01 | 0.808554 | 2.925841e-50 | 1.677983e-47 |
MsG0380017382.01 | MsG0580029300.01 | 0.837043 | 6.561175e-57 | 8.420393e-54 |
MsG0380017476.01 | MsG0580029300.01 | 0.802154 | 6.417313e-49 | 3.120884e-46 |
MsG0380017556.01 | MsG0580029300.01 | 0.820181 | 7.855448e-53 | 6.171824e-50 |
MsG0380017719.01 | MsG0580029300.01 | 0.810111 | 1.355701e-50 | 8.102585e-48 |
MsG0380017811.01 | MsG0580029300.01 | 0.800209 | 1.604849e-48 | 7.429115e-46 |
MsG0380017888.01 | MsG0580029300.01 | 0.801229 | 9.937627e-49 | 4.720850e-46 |
MsG0580026157.01 | MsG0580029300.01 | 0.829496 | 4.983270e-55 | 5.108717e-52 |
MsG0580026225.01 | MsG0580029300.01 | 0.831719 | 1.423138e-55 | 1.557536e-52 |
MsG0580026238.01 | MsG0580029300.01 | 0.808772 | 2.628456e-50 | 1.515956e-47 |
MsG0580027034.01 | MsG0580029300.01 | 0.814605 | 1.414666e-51 | 9.535293e-49 |
MsG0580027043.01 | MsG0580029300.01 | 0.859880 | 3.044202e-63 | 8.163932e-60 |
MsG0580027441.01 | MsG0580029300.01 | 0.847109 | 1.423493e-59 | 2.503939e-56 |
MsG0580028072.01 | MsG0580029300.01 | 0.811550 | 6.620465e-51 | 4.110206e-48 |
MsG0580028900.01 | MsG0580029300.01 | 0.807015 | 6.213967e-50 | 3.423154e-47 |
MsG0580029132.01 | MsG0580029300.01 | 0.873377 | 1.541839e-67 | 6.676251e-64 |
MsG0580029148.01 | MsG0580029300.01 | 0.807822 | 4.190130e-50 | 2.357214e-47 |
MsG0580029258.01 | MsG0580029300.01 | 0.809413 | 1.915992e-50 | 1.124233e-47 |
MsG0580029283.01 | MsG0580029300.01 | 0.877678 | 5.183819e-69 | 2.629868e-65 |
MsG0580029300.01 | MsG0580029370.01 | 0.839771 | 1.298407e-57 | 1.811414e-54 |
MsG0580029300.01 | MsG0580029594.01 | 0.857563 | 1.498682e-62 | 3.714617e-59 |
MsG0580029300.01 | MsG0580029658.01 | 0.805447 | 1.329319e-49 | 7.034280e-47 |
MsG0580029300.01 | MsG0580029661.01 | 0.832533 | 8.956454e-56 | 1.003893e-52 |
MsG0580029300.01 | MsG0580029668.01 | -0.801861 | 7.373455e-49 | 3.559308e-46 |
MsG0580029300.01 | MsG0580029783.01 | 0.834853 | 2.357471e-56 | 2.832554e-53 |
MsG0580029300.01 | MsG0580029794.01 | 0.800471 | 1.419379e-48 | 6.614251e-46 |
MsG0580029300.01 | MsG0580029801.01 | 0.848703 | 5.176557e-60 | 9.582114e-57 |
MsG0580029300.01 | MsG0580029952.01 | 0.810439 | 1.152002e-50 | 6.943983e-48 |
MsG0580029300.01 | MsG0580030003.01 | 0.844786 | 6.093677e-59 | 9.946623e-56 |
MsG0580029300.01 | MsG0580030160.01 | 0.872809 | 2.391068e-67 | 1.014108e-63 |
MsG0580029300.01 | MsG0580030204.01 | 0.894890 | 1.611330e-75 | 1.632869e-71 |
MsG0580029300.01 | MsG0580030235.01 | 0.825521 | 4.479726e-54 | 4.092707e-51 |
MsG0580029300.01 | MsG0680030408.01 | 0.835169 | 1.962608e-56 | 2.380641e-53 |
MsG0580029300.01 | MsG0680031538.01 | 0.827708 | 1.347908e-54 | 1.311471e-51 |
MsG0580029300.01 | MsG0680031699.01 | 0.802355 | 5.836250e-49 | 2.852954e-46 |
MsG0580029300.01 | MsG0680032430.01 | 0.821391 | 4.138856e-53 | 3.362836e-50 |
MsG0580029300.01 | MsG0680032770.01 | 0.827574 | 1.451172e-54 | 1.406377e-51 |
MsG0580029300.01 | MsG0680034061.01 | 0.833927 | 4.025954e-56 | 4.705363e-53 |
MsG0580029300.01 | MsG0680034671.01 | 0.876019 | 1.946972e-68 | 9.291588e-65 |
MsG0580029300.01 | MsG0680035306.01 | 0.836512 | 8.958286e-57 | 1.131392e-53 |
MsG0580029300.01 | MsG0680035574.01 | 0.808054 | 3.739800e-50 | 2.116744e-47 |
MsG0580029300.01 | MsG0680035582.01 | 0.860100 | 2.614338e-63 | 7.064576e-60 |
MsG0580029300.01 | MsG0680035848.01 | 0.885515 | 7.606241e-72 | 5.237049e-68 |
MsG0580029300.01 | MsG0680035854.01 | 0.882913 | 6.986939e-71 | 4.336672e-67 |
MsG0580029300.01 | MsG0780036240.01 | 0.902721 | 7.257292e-79 | 1.041614e-74 |
MsG0580029300.01 | MsG0780038400.01 | 0.833973 | 3.919280e-56 | 4.587240e-53 |
MsG0580029300.01 | MsG0780038587.01 | 0.872556 | 2.905507e-67 | 1.221276e-63 |
MsG0580029300.01 | MsG0780038645.01 | 0.810052 | 1.395843e-50 | 8.329395e-48 |
MsG0580029300.01 | MsG0780039340.01 | 0.877615 | 5.451237e-69 | 2.758393e-65 |
MsG0580029300.01 | MsG0780039570.01 | 0.823773 | 1.156322e-53 | 1.005229e-50 |
MsG0580029300.01 | MsG0780039943.01 | 0.871388 | 7.099098e-67 | 2.858627e-63 |
MsG0580029300.01 | MsG0780040125.01 | 0.819229 | 1.296074e-52 | 9.915542e-50 |
MsG0580029300.01 | MsG0780040208.01 | 0.805280 | 1.440350e-49 | 7.589124e-47 |
MsG0580029300.01 | MsG0780040338.01 | 0.867917 | 9.608339e-66 | 3.411490e-62 |
MsG0580029300.01 | MsG0780040519.01 | 0.804933 | 1.702962e-49 | 8.893891e-47 |
MsG0580029300.01 | MsG0780040718.01 | 0.887160 | 1.820608e-72 | 1.338690e-68 |
MsG0580029300.01 | MsG0780040845.01 | 0.803554 | 3.298699e-49 | 1.662692e-46 |
MsG0580029300.01 | MsG0780040861.01 | 0.862084 | 6.507133e-64 | 1.882005e-60 |
MsG0580029300.01 | MsG0780041223.01 | 0.855825 | 4.864498e-62 | 1.137598e-58 |
MsG0580029300.01 | MsG0780041295.01 | 0.851525 | 8.385120e-61 | 1.701927e-57 |
MsG0580029300.01 | MsG0780041351.01 | 0.808624 | 2.826110e-50 | 1.623684e-47 |
MsG0580029300.01 | MsG0780041490.01 | 0.869314 | 3.398290e-66 | 1.269655e-62 |
MsG0580029300.01 | MsG0880042848.01 | 0.842516 | 2.465166e-58 | 3.746993e-55 |
MsG0580029300.01 | MsG0880042972.01 | 0.821354 | 4.222792e-53 | 3.427372e-50 |
MsG0580029300.01 | MsG0880043082.01 | 0.839900 | 1.201229e-57 | 1.682726e-54 |
MsG0580029300.01 | MsG0880043163.01 | 0.840842 | 6.813437e-58 | 9.828033e-55 |
MsG0580029300.01 | MsG0880043592.01 | 0.832226 | 1.066709e-55 | 1.184761e-52 |
MsG0580029300.01 | MsG0880045106.01 | 0.804270 | 2.341386e-49 | 1.201992e-46 |
MsG0580029300.01 | MsG0880045619.01 | 0.836529 | 8.872705e-57 | 1.121133e-53 |
MsG0580029300.01 | MsG0880045631.01 | 0.828428 | 9.041605e-55 | 8.984729e-52 |
MsG0580029300.01 | MsG0880045656.01 | 0.845666 | 3.521526e-59 | 5.912572e-56 |
MsG0580029300.01 | MsG0880045951.01 | 0.823071 | 1.686809e-53 | 1.437521e-50 |
MsG0580029300.01 | MsG0880046058.01 | 0.844158 | 8.992008e-59 | 1.439000e-55 |
MsG0580029300.01 | MsG0880046068.01 | 0.809740 | 1.629504e-50 | 9.644835e-48 |
MsG0580029300.01 | MsG0880046074.01 | 0.833890 | 4.111566e-56 | 4.799976e-53 |
MsG0580029300.01 | MsG0880046091.01 | 0.832222 | 1.069062e-55 | 1.187221e-52 |
MsG0580029300.01 | MsG0880046113.01 | 0.805099 | 1.571941e-49 | 8.244255e-47 |
MsG0580029300.01 | MsG0880046177.01 | 0.891853 | 2.717754e-74 | 2.423564e-70 |
MsG0580029300.01 | MsG0880046253.01 | 0.845030 | 5.235453e-59 | 8.611966e-56 |
MsG0580029300.01 | MsG0880046328.01 | 0.817918 | 2.569519e-52 | 1.896080e-49 |
MsG0580029300.01 | MsG0880046575.01 | 0.810991 | 8.752859e-51 | 5.355247e-48 |
MsG0580029300.01 | MsG0880046933.01 | 0.868722 | 5.286809e-66 | 1.932529e-62 |
MsG0580029300.01 | MsG0880046973.01 | 0.805487 | 1.303854e-49 | 6.906753e-47 |
MsG0580029300.01 | MsG0880047086.01 | 0.843668 | 1.215931e-58 | 1.916395e-55 |
MsG0580029300.01 | MsG0880047116.01 | 0.844718 | 6.356374e-59 | 1.035268e-55 |
MsG0580029300.01 | MsG0880047143.01 | 0.807130 | 5.873859e-50 | 3.245426e-47 |
MsG0580029300.01 | MsG0880047427.01 | 0.801045 | 1.083775e-48 | 5.124957e-46 |
MsG0580029300.01 | MsG0880047428.01 | 0.841002 | 6.187247e-58 | 8.967884e-55 |
MsG0580029300.01 | MsG0880047607.01 | 0.853329 | 2.568550e-61 | 5.529848e-58 |
MsG0280006595.01 | MsG0580029300.01 | 0.838549 | 2.692221e-57 | 3.618181e-54 |
MsG0280006759.01 | MsG0580029300.01 | 0.844242 | 8.536378e-59 | 1.369634e-55 |
MsG0280006819.01 | MsG0580029300.01 | 0.804275 | 2.335461e-49 | 1.199127e-46 |
MsG0280006993.01 | MsG0580029300.01 | 0.812914 | 3.336199e-51 | 2.147883e-48 |
MsG0280007024.01 | MsG0580029300.01 | 0.804904 | 1.727075e-49 | 9.013341e-47 |
MsG0280007161.01 | MsG0580029300.01 | 0.855910 | 4.594824e-62 | 1.077568e-58 |
MsG0280007440.01 | MsG0580029300.01 | 0.828160 | 1.049249e-54 | 1.034530e-51 |
MsG0280007441.01 | MsG0580029300.01 | 0.829253 | 5.708795e-55 | 5.811805e-52 |
MsG0280007585.01 | MsG0580029300.01 | 0.813177 | 2.920448e-51 | 1.893540e-48 |
MsG0280007609.01 | MsG0580029300.01 | 0.806872 | 6.659923e-50 | 3.655375e-47 |
MsG0280007847.01 | MsG0580029300.01 | 0.815683 | 8.153744e-52 | 5.659632e-49 |
MsG0280008118.01 | MsG0580029300.01 | 0.850199 | 1.982042e-60 | 3.852048e-57 |
MsG0280008239.01 | MsG0580029300.01 | 0.804622 | 1.977526e-49 | 1.024437e-46 |
MsG0280008286.01 | MsG0580029300.01 | 0.840060 | 1.091257e-57 | 1.536518e-54 |
MsG0280008327.01 | MsG0580029300.01 | 0.821679 | 3.552598e-53 | 2.909820e-50 |
MsG0280009141.01 | MsG0580029300.01 | 0.826335 | 2.870150e-54 | 2.683849e-51 |
MsG0280009235.01 | MsG0580029300.01 | 0.840408 | 8.854159e-58 | 1.260088e-54 |
MsG0280009356.01 | MsG0580029300.01 | 0.813379 | 2.637533e-51 | 1.719707e-48 |
MsG0280009375.01 | MsG0580029300.01 | 0.854946 | 8.771578e-62 | 1.992129e-58 |
MsG0280009575.01 | MsG0580029300.01 | 0.811233 | 7.757822e-51 | 4.776187e-48 |
MsG0280010002.01 | MsG0580029300.01 | 0.813138 | 2.978633e-51 | 1.929238e-48 |
MsG0280010205.01 | MsG0580029300.01 | 0.819895 | 9.132439e-53 | 7.118139e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029300.01.T01 | MTR_5g084060 | 60.714 | 56 | 22 | 0 | 1 | 56 | 1 | 56 | 2.39e-17 | 68.9 |
MsG0580029300.01.T01 | MTR_4g127150 | 60.714 | 56 | 22 | 0 | 1 | 56 | 1 | 56 | 2.39e-17 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580029300.01.T01 | AT5G50460 | 57.143 | 56 | 24 | 0 | 1 | 56 | 1 | 56 | 4.87e-16 | 65.9 |
MsG0580029300.01.T01 | AT4G24920 | 57.143 | 56 | 24 | 0 | 1 | 56 | 1 | 56 | 4.87e-16 | 65.9 |
MsG0580029300.01.T01 | AT3G48570 | 51.786 | 56 | 27 | 0 | 1 | 56 | 1 | 56 | 4.88e-14 | 60.5 |
Find 26 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTGAAGAGAAAATCGATTT+AGG | 0.188712 | 5:+94947546 | None:intergenic |
CACTGAATGTTCTATTGAAA+TGG | 0.278559 | 5:+94945841 | None:intergenic |
GTGAAGAGAAAATCGATTTA+GGG | 0.287423 | 5:+94947547 | None:intergenic |
AACGAGCCTAACGCTGTCTT+TGG | 0.352610 | 5:+94947605 | None:intergenic |
AAGTTGTTGGTTGTACAATT+TGG | 0.363808 | 5:+94945571 | None:intergenic |
CACCTTTGCGATCGGGTTTG+TGG | 0.390413 | 5:+94947574 | None:intergenic |
TTATCTATATTTCTTATCTT+CGG | 0.410507 | 5:-94945787 | MsG0580029300.01.T01:three_prime_UTR |
GGGGTTACACCTTTGCGATC+GGG | 0.438874 | 5:+94947567 | None:intergenic |
ACATGTTACATAAAACTGTA+AGG | 0.442953 | 5:+94945757 | None:intergenic |
ACTGAATGTTCTATTGAAAT+GGG | 0.454214 | 5:+94945842 | None:intergenic |
AGGGGTTACACCTTTGCGAT+CGG | 0.459137 | 5:+94947566 | None:intergenic |
TCAGTTAGTAAATTTCTAAG+AGG | 0.462491 | 5:-94945610 | MsG0580029300.01.T01:three_prime_UTR |
TGGATCGAAGACGGAATCAA+TGG | 0.467824 | 5:+94947641 | None:intergenic |
GATTATTTCTGCAGGATGAC+GGG | 0.476757 | 5:-94945915 | MsG0580029300.01.T01:intron |
TGATTATTTCTGCAGGATGA+CGG | 0.511253 | 5:-94945916 | MsG0580029300.01.T01:intron |
TTCTCTGAGTGGATCGAAGA+CGG | 0.515282 | 5:+94947632 | None:intergenic |
CCTCAGGAAAGTTGTGAAGC+AGG | 0.527193 | 5:-94945881 | MsG0580029300.01.T01:CDS |
GAAAGTTGTGAAGCAGGAGG+AGG | 0.550624 | 5:-94945875 | MsG0580029300.01.T01:CDS |
ACGGGAATTACAATCGCCTC+AGG | 0.556837 | 5:-94945897 | MsG0580029300.01.T01:CDS |
AATTCGCCAAAGACAGCGTT+AGG | 0.569841 | 5:-94947611 | MsG0580029300.01.T01:CDS |
TGAAGAGAAAATCGATTTAG+GGG | 0.612420 | 5:+94947548 | None:intergenic |
CCTGCTTCACAACTTTCCTG+AGG | 0.626602 | 5:+94945881 | None:intergenic |
TGCCACAAACCCGATCGCAA+AGG | 0.641778 | 5:-94947576 | MsG0580029300.01.T01:CDS |
AGGTCAAAAGTCTCAACACA+TGG | 0.662789 | 5:+94945720 | None:intergenic |
CAGGAAAGTTGTGAAGCAGG+AGG | 0.667526 | 5:-94945878 | MsG0580029300.01.T01:CDS |
TCTTTGGCGAATTCTCTGAG+TGG | 0.681670 | 5:+94947621 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGAAAGAAAAAAAAAAA+TGG | - | Chr5:94946201-94946220 | MsG0580029300.01.T01:intron | 10.0% |
!! | ACAAAATAAACATTATATTG+AGG | + | Chr5:94947082-94947101 | None:intergenic | 15.0% |
!! | TTATCTATATTTCTTATCTT+CGG | - | Chr5:94947399-94947418 | MsG0580029300.01.T01:intron | 15.0% |
!!! | ATAATGTTTATTTTGTCTTT+TGG | - | Chr5:94947086-94947105 | MsG0580029300.01.T01:intron | 15.0% |
!!! | TTGATTTGAATGAAATATTT+TGG | - | Chr5:94945914-94945933 | MsG0580029300.01.T01:intron | 15.0% |
!!! | TTTTATAATGTTCATCTAAA+TGG | - | Chr5:94946530-94946549 | MsG0580029300.01.T01:intron | 15.0% |
!! | AAAAATAGCAAATAAGTTGT+TGG | + | Chr5:94947631-94947650 | None:intergenic | 20.0% |
!! | AAACATATTTGTGACAATAA+GGG | - | Chr5:94946666-94946685 | MsG0580029300.01.T01:intron | 20.0% |
!! | TAAACATATTTGTGACAATA+AGG | - | Chr5:94946665-94946684 | MsG0580029300.01.T01:intron | 20.0% |
!!! | ATTTGAATGAAATATTTTGG+TGG | - | Chr5:94945917-94945936 | MsG0580029300.01.T01:intron | 20.0% |
!!! | ATTTTTTGTATGATTTGCAA+TGG | - | Chr5:94946408-94946427 | MsG0580029300.01.T01:intron | 20.0% |
! | ACAAGTAAATCCATTATGTT+AGG | + | Chr5:94946384-94946403 | None:intergenic | 25.0% |
! | ACATGTTACATAAAACTGTA+AGG | + | Chr5:94947432-94947451 | None:intergenic | 25.0% |
! | ACTGAATGTTCTATTGAAAT+GGG | + | Chr5:94947347-94947366 | None:intergenic | 25.0% |
! | ATTGAAAACAACTTTGCAAT+TGG | + | Chr5:94946716-94946735 | None:intergenic | 25.0% |
! | GAAACAATTTGATTGAATCA+AGG | - | Chr5:94945980-94945999 | MsG0580029300.01.T01:intron | 25.0% |
! | GAGAATTTAGTATTTACACT+AGG | - | Chr5:94947012-94947031 | MsG0580029300.01.T01:intron | 25.0% |
! | TCAGTTAGTAAATTTCTAAG+AGG | - | Chr5:94947576-94947595 | MsG0580029300.01.T01:CDS | 25.0% |
! | TGAGATCTTAATATGAATCA+GGG | - | Chr5:94946311-94946330 | MsG0580029300.01.T01:intron | 25.0% |
! | TTGAGATCTTAATATGAATC+AGG | - | Chr5:94946310-94946329 | MsG0580029300.01.T01:intron | 25.0% |
!! | GGTTTTTGTAAGATTTACAA+TGG | - | Chr5:94946064-94946083 | MsG0580029300.01.T01:intron | 25.0% |
!!! | AATGAAATATTTTGGTGGAA+TGG | - | Chr5:94945922-94945941 | MsG0580029300.01.T01:intron | 25.0% |
!!! | TGAATCAAGGATATTTTGAA+GGG | - | Chr5:94945993-94946012 | MsG0580029300.01.T01:intron | 25.0% |
!!! | TTGAATCAAGGATATTTTGA+AGG | - | Chr5:94945992-94946011 | MsG0580029300.01.T01:intron | 25.0% |
AGGAGGAAAAAGTTTAGATA+AGG | - | Chr5:94947497-94947516 | MsG0580029300.01.T01:intron | 30.0% | |
CACTGAATGTTCTATTGAAA+TGG | + | Chr5:94947348-94947367 | None:intergenic | 30.0% | |
CATAGGTAGTAAAAACAGAT+AGG | + | Chr5:94946953-94946972 | None:intergenic | 30.0% | |
GAGATCTTAATATGAATCAG+GGG | - | Chr5:94946312-94946331 | MsG0580029300.01.T01:intron | 30.0% | |
TGAATTGCTGATGTAAATGT+TGG | - | Chr5:94945951-94945970 | MsG0580029300.01.T01:intron | 30.0% | |
TGTTCGTAGTTATGATTGAT+TGG | - | Chr5:94946483-94946502 | MsG0580029300.01.T01:intron | 30.0% | |
TTTAATGTGATCACATGTGT+TGG | - | Chr5:94946229-94946248 | MsG0580029300.01.T01:intron | 30.0% | |
! | AAGTTGTTGGTTGTACAATT+TGG | + | Chr5:94947618-94947637 | None:intergenic | 30.0% |
! | AGTGAAGAGAAAATCGATTT+AGG | + | Chr5:94945643-94945662 | None:intergenic | 30.0% |
! | CTTATGTCAAAGGATGTTTT+TGG | - | Chr5:94947044-94947063 | MsG0580029300.01.T01:intron | 30.0% |
! | GATTTTCATGCCTAACATAA+TGG | - | Chr5:94946371-94946390 | MsG0580029300.01.T01:intron | 30.0% |
! | GTGAAGAGAAAATCGATTTA+GGG | + | Chr5:94945642-94945661 | None:intergenic | 30.0% |
! | TGAAGAGAAAATCGATTTAG+GGG | + | Chr5:94945641-94945660 | None:intergenic | 30.0% |
! | TTAGTATTGTGTTACTCATG+TGG | - | Chr5:94946122-94946141 | MsG0580029300.01.T01:intron | 30.0% |
! | TTGAATGTAATCAGAAGTGT+CGG | + | Chr5:94946839-94946858 | None:intergenic | 30.0% |
!! | AATCAAGGATATTTTGAAGG+GGG | - | Chr5:94945995-94946014 | MsG0580029300.01.T01:intron | 30.0% |
!! | GAATCAAGGATATTTTGAAG+GGG | - | Chr5:94945994-94946013 | MsG0580029300.01.T01:intron | 30.0% |
!! | TAACTCTTGATTATTTCTGC+AGG | - | Chr5:94947263-94947282 | MsG0580029300.01.T01:intron | 30.0% |
!! | TTGTTTTGTAGAATTCTCCA+AGG | - | Chr5:94945710-94945729 | MsG0580029300.01.T01:three_prime_UTR | 30.0% |
!!! | TGGTTGTTTTTATGCATAGT+GGG | - | Chr5:94946027-94946046 | MsG0580029300.01.T01:intron | 30.0% |
!!! | TTGGTTGTTTTTATGCATAG+TGG | - | Chr5:94946026-94946045 | MsG0580029300.01.T01:intron | 30.0% |
ACCAACACTAACACTTCTAA+CGG | + | Chr5:94946271-94946290 | None:intergenic | 35.0% | |
ACTGTCAATTTGTGATGCTA+CGG | + | Chr5:94946579-94946598 | None:intergenic | 35.0% | |
ATGAACAACTCAAACTGACA+TGG | + | Chr5:94946890-94946909 | None:intergenic | 35.0% | |
CTCAAATCAAATTGACGATG+AGG | + | Chr5:94946295-94946314 | None:intergenic | 35.0% | |
GATTGTTCTTTCCATTGAGT+TGG | - | Chr5:94947144-94947163 | MsG0580029300.01.T01:intron | 35.0% | |
TGAATCCTGTAAGACATATG+AGG | + | Chr5:94947199-94947218 | None:intergenic | 35.0% | |
!! | ATTGGTGATTTTCTCTGCAT+TGG | - | Chr5:94946501-94946520 | MsG0580029300.01.T01:intron | 35.0% |
!! | TGATTATTTCTGCAGGATGA+CGG | - | Chr5:94947270-94947289 | MsG0580029300.01.T01:intron | 35.0% |
!!! | AATCAGGGGATTTTTGAAGT+GGG | - | Chr5:94946326-94946345 | MsG0580029300.01.T01:intron | 35.0% |
AACAACATCATCGTTGGATC+TGG | - | Chr5:94945810-94945829 | MsG0580029300.01.T01:three_prime_UTR | 40.0% | |
AACTGCCTCATATGTCTTAC+AGG | - | Chr5:94947191-94947210 | MsG0580029300.01.T01:intron | 40.0% | |
AATCACAGCAACCAACTCAA+TGG | + | Chr5:94947158-94947177 | None:intergenic | 40.0% | |
ACACAAGACACAACACTGAA+TGG | + | Chr5:94946867-94946886 | None:intergenic | 40.0% | |
AGGTCAAAAGTCTCAACACA+TGG | + | Chr5:94947469-94947488 | None:intergenic | 40.0% | |
CCAACGATGATGTTGTTGAT+TGG | + | Chr5:94945807-94945826 | None:intergenic | 40.0% | |
CCAATCAACAACATCATCGT+TGG | - | Chr5:94945804-94945823 | MsG0580029300.01.T01:three_prime_UTR | 40.0% | |
CTTCACAGAAATAGTTCCAC+GGG | + | Chr5:94946986-94947005 | None:intergenic | 40.0% | |
GCTGTAGCAACTTATGTCAA+AGG | - | Chr5:94947034-94947053 | MsG0580029300.01.T01:intron | 40.0% | |
GCTTCACAGAAATAGTTCCA+CGG | + | Chr5:94946987-94947006 | None:intergenic | 40.0% | |
! | TGCATGTTTGCTACAATGCA+TGG | - | Chr5:94946097-94946116 | MsG0580029300.01.T01:intron | 40.0% |
! | TTTGAAGTGGGTGATCTGTT+TGG | - | Chr5:94946338-94946357 | MsG0580029300.01.T01:intron | 40.0% |
!! | GAATCAGGGGATTTTTGAAG+TGG | - | Chr5:94946325-94946344 | MsG0580029300.01.T01:intron | 40.0% |
!! | GATTATTTCTGCAGGATGAC+GGG | - | Chr5:94947271-94947290 | MsG0580029300.01.T01:intron | 40.0% |
!! | TCCGTTAGAAGTGTTAGTGT+TGG | - | Chr5:94946267-94946286 | MsG0580029300.01.T01:intron | 40.0% |
!! | TTTGAAGGGGGTATTCTGTT+TGG | - | Chr5:94946007-94946026 | MsG0580029300.01.T01:intron | 40.0% |
!!! | GATTTTCTCTGCATTGGTTG+TGG | - | Chr5:94946507-94946526 | MsG0580029300.01.T01:intron | 40.0% |
!!! | GCATAGTGGGTTTTAGTTGT+TGG | - | Chr5:94946040-94946059 | MsG0580029300.01.T01:intron | 40.0% |
!!! | TAGTGGGTTTTAGTTGTTGG+AGG | - | Chr5:94946043-94946062 | MsG0580029300.01.T01:intron | 40.0% |
AATTCGCCAAAGACAGCGTT+AGG | - | Chr5:94945575-94945594 | MsG0580029300.01.T01:three_prime_UTR | 45.0% | |
CATCACAACGAAACCAATCG+CGG | + | Chr5:94945748-94945767 | None:intergenic | 45.0% | |
CATCATCGTTGGATCTGGTT+AGG | - | Chr5:94945815-94945834 | MsG0580029300.01.T01:three_prime_UTR | 45.0% | |
CTTCTAACGGAAGATGTGTC+TGG | + | Chr5:94946258-94946277 | None:intergenic | 45.0% | |
TCTTTGGCGAATTCTCTGAG+TGG | + | Chr5:94945568-94945587 | None:intergenic | 45.0% | |
TGGATCGAAGACGGAATCAA+TGG | + | Chr5:94945548-94945567 | None:intergenic | 45.0% | |
TTCTCTGAGTGGATCGAAGA+CGG | + | Chr5:94945557-94945576 | None:intergenic | 45.0% | |
! | CTTTTTCCTCCTTGAGCAAC+AGG | + | Chr5:94947489-94947508 | None:intergenic | 45.0% |
! | GACTTTTGACCTGTTGCTCA+AGG | - | Chr5:94947477-94947496 | MsG0580029300.01.T01:intron | 45.0% |
! | TCGTTGTGATGGGATTCGTT+GGG | - | Chr5:94945757-94945776 | MsG0580029300.01.T01:three_prime_UTR | 45.0% |
! | TTCGTTGTGATGGGATTCGT+TGG | - | Chr5:94945756-94945775 | MsG0580029300.01.T01:three_prime_UTR | 45.0% |
! | TTTTGACCTGTTGCTCAAGG+AGG | - | Chr5:94947480-94947499 | MsG0580029300.01.T01:intron | 45.0% |
!! | GCGATTGGTTTCGTTGTGAT+GGG | - | Chr5:94945747-94945766 | MsG0580029300.01.T01:three_prime_UTR | 45.0% |
AACGAGCCTAACGCTGTCTT+TGG | + | Chr5:94945584-94945603 | None:intergenic | 50.0% | |
AATAGTTCCACGGGCTCTTG+AGG | + | Chr5:94946977-94946996 | None:intergenic | 50.0% | |
ACATATGAGGCAGTTCCGCT+CGG | + | Chr5:94947186-94947205 | None:intergenic | 50.0% | |
ACGGGAATTACAATCGCCTC+AGG | - | Chr5:94947289-94947308 | MsG0580029300.01.T01:intron | 50.0% | |
AGGGGTTACACCTTTGCGAT+CGG | + | Chr5:94945623-94945642 | None:intergenic | 50.0% | |
ATAGTTCCACGGGCTCTTGA+GGG | + | Chr5:94946976-94946995 | None:intergenic | 50.0% | |
CAGGAAAGTTGTGAAGCAGG+AGG | - | Chr5:94947308-94947327 | MsG0580029300.01.T01:intron | 50.0% | |
CCTCAGGAAAGTTGTGAAGC+AGG | - | Chr5:94947305-94947324 | MsG0580029300.01.T01:intron | 50.0% | |
CCTGCTTCACAACTTTCCTG+AGG | + | Chr5:94947308-94947327 | None:intergenic | 50.0% | |
GAAAGTTGTGAAGCAGGAGG+AGG | - | Chr5:94947311-94947330 | MsG0580029300.01.T01:intron | 50.0% | |
TGCTGTGATTGATTGCCGAG+CGG | - | Chr5:94947168-94947187 | MsG0580029300.01.T01:intron | 50.0% | |
!! | CGCGATTGGTTTCGTTGTGA+TGG | - | Chr5:94945746-94945765 | MsG0580029300.01.T01:three_prime_UTR | 50.0% |
CACCTTTGCGATCGGGTTTG+TGG | + | Chr5:94945615-94945634 | None:intergenic | 55.0% | |
GGGGTTACACCTTTGCGATC+GGG | + | Chr5:94945622-94945641 | None:intergenic | 55.0% | |
TGCCACAAACCCGATCGCAA+AGG | - | Chr5:94945610-94945629 | MsG0580029300.01.T01:three_prime_UTR | 55.0% | |
! | GTTGCTGTTCGTACCGCGAT+TGG | - | Chr5:94945732-94945751 | MsG0580029300.01.T01:three_prime_UTR | 55.0% |
CGCGGTACGAACAGCAACCT+TGG | + | Chr5:94945730-94945749 | None:intergenic | 60.0% | |
CCTATGCCCTCAAGAGCCCG+TGG | - | Chr5:94946967-94946986 | MsG0580029300.01.T01:intron | 65.0% | |
! | CCACGGGCTCTTGAGGGCAT+AGG | + | Chr5:94946970-94946989 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 94945538 | 94947670 | 94945538 | ID=MsG0580029300.01;Name=MsG0580029300.01 |
Chr5 | mRNA | 94945538 | 94947670 | 94945538 | ID=MsG0580029300.01.T01;Parent=MsG0580029300.01;Name=MsG0580029300.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0.5|1|0|0|2|314|71 |
Chr5 | exon | 94945538 | 94945923 | 94945538 | ID=MsG0580029300.01.T01:exon:49974;Parent=MsG0580029300.01.T01 |
Chr5 | exon | 94947527 | 94947670 | 94947527 | ID=MsG0580029300.01.T01:exon:49973;Parent=MsG0580029300.01.T01 |
Chr5 | CDS | 94947527 | 94947670 | 94947527 | ID=MsG0580029300.01.T01:cds;Parent=MsG0580029300.01.T01 |
Chr5 | CDS | 94945852 | 94945923 | 94945852 | ID=MsG0580029300.01.T01:cds;Parent=MsG0580029300.01.T01 |
Chr5 | three_prime_UTR | 94945538 | 94945851 | 94945538 | ID=MsG0580029300.01.T01:three_prime_utr;Parent=MsG0580029300.01.T01 |
Gene Sequence |
Protein sequence |