AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020038.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020038.01.T01 MTR_2g450310 91.521 401 34 0 155 555 3 403 0.0 744
MsG0480020038.01.T01 MTR_2g450510 76.980 404 90 1 155 555 3 406 0.0 640
MsG0480020038.01.T01 MTR_4g124800 42.368 380 212 6 179 553 36 413 5.66e-97 305
MsG0480020038.01.T01 MTR_1308s0010 77.457 173 39 0 379 551 1 173 8.86e-94 285
MsG0480020038.01.T01 MTR_2g044140 41.192 386 220 5 156 538 13 394 6.23e-92 292
MsG0480020038.01.T01 MTR_2g043850 41.710 386 218 5 156 538 13 394 5.24e-89 284
MsG0480020038.01.T01 MTR_2g020630 39.444 360 212 4 156 512 13 369 1.19e-88 283
MsG0480020038.01.T01 MTR_1088s0010 82.069 145 26 0 155 299 3 147 2.04e-84 259
MsG0480020038.01.T01 MTR_1372s0010 82.278 79 14 0 299 377 1 79 3.29e-41 143
MsG0480020038.01.T01 MTR_1g052045 63.953 86 31 0 1 86 144 229 1.55e-21 95.5
MsG0480020038.01.T01 MTR_1g046230 28.792 389 200 23 151 528 20 342 2.04e-17 85.1
MsG0480020038.01.T01 MTR_7g107710 26.862 376 205 19 157 526 6 317 7.82e-17 83.2
MsG0480020038.01.T01 MTR_1g069275 26.316 380 204 18 159 528 27 340 2.90e-16 81.6
MsG0480020038.01.T01 MTR_0389s0050 51.724 87 35 2 28 114 1 80 4.82e-15 72.8
MsG0480020038.01.T01 MTR_4g051642 24.074 378 216 16 157 528 7 319 6.18e-15 77.4
MsG0480020038.01.T01 MTR_7g099330 25.000 376 212 18 158 528 25 335 9.14e-14 73.9
MsG0480020038.01.T01 MTR_8g037880 26.482 253 129 8 156 384 3 222 1.20e-13 73.6
MsG0480020038.01.T01 MTR_1g011630 26.455 378 203 18 159 528 18 328 1.36e-13 73.2
MsG0480020038.01.T01 MTR_8g037910 26.953 256 129 9 156 387 3 224 2.91e-13 70.9
MsG0480020038.01.T01 MTR_8g037910 26.953 256 129 9 156 387 3 224 3.55e-13 71.2
MsG0480020038.01.T01 MTR_8g037910 26.953 256 129 9 156 387 3 224 5.50e-13 71.6
MsG0480020038.01.T01 MTR_5g033260 24.211 380 209 15 157 526 6 316 1.08e-12 70.5
MsG0480020038.01.T01 MTR_3g088925 23.058 399 235 16 157 548 7 340 1.43e-12 70.1
MsG0480020038.01.T01 MTR_1g054790 67.391 46 15 0 3 48 20 65 4.74e-12 63.9
MsG0480020038.01.T01 MTR_3g088945 22.807 399 236 16 157 548 7 340 1.05e-11 67.4
MsG0480020038.01.T01 MTR_7g029280 51.667 60 25 1 29 88 358 413 1.26e-11 67.0
MsG0480020038.01.T01 MTR_7g107690 26.522 230 135 9 152 380 3 199 4.05e-11 65.5
MsG0480020038.01.T01 MTR_3g109520 25.532 376 215 16 158 528 40 355 7.15e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020038.01.T01 AT1G19250 42.402 408 215 9 156 553 12 409 3.29e-106 329
MsG0480020038.01.T01 AT5G45180 38.025 405 191 11 150 545 6 359 3.52e-88 280
MsG0480020038.01.T01 AT4G28720 26.190 378 212 19 158 528 26 343 4.10e-16 81.3
MsG0480020038.01.T01 AT1G62560 26.255 259 132 10 150 381 6 232 3.63e-14 75.1
MsG0480020038.01.T01 AT5G43890 26.862 376 210 19 159 528 27 343 3.80e-14 75.1
MsG0480020038.01.T01 AT1G62560 26.255 259 132 10 150 381 6 232 4.91e-14 75.1
MsG0480020038.01.T01 AT1G48910 25.401 374 212 16 157 526 5 315 1.05e-13 73.6
MsG0480020038.01.T01 AT1G21430 25.469 373 211 15 157 526 9 317 1.79e-13 72.8
MsG0480020038.01.T01 AT5G11320 25.532 376 207 17 159 528 19 327 9.25e-13 70.9
MsG0480020038.01.T01 AT1G65860 22.605 261 142 7 148 381 4 231 1.40e-12 70.5
MsG0480020038.01.T01 AT5G11320 24.543 383 202 17 159 528 19 327 1.82e-12 69.3
MsG0480020038.01.T01 AT1G04610 25.737 373 221 17 158 528 38 356 7.83e-12 68.2
MsG0480020038.01.T01 AT4G32540 25.397 378 209 19 159 528 23 335 4.74e-11 65.5
MsG0480020038.01.T01 AT4G13260 24.797 246 145 10 159 402 30 237 6.40e-11 64.3
MsG0480020038.01.T01 AT4G32540 26.721 247 135 13 159 402 23 226 7.07e-11 65.1
MsG0480020038.01.T01 AT1G62620 24.303 251 136 7 157 381 13 235 8.31e-11 64.7
MsG0480020038.01.T01 AT1G62620 24.303 251 136 7 157 381 13 235 9.29e-11 64.7

Find 96 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAACTGTCAATGTAATTT+TGG 0.131877 4:-32603290 None:intergenic
GCAGATTAAGCAGAGTTTAA+TGG 0.192027 4:+32597330 MsG0480020038.01.T01:CDS
TCTCCCAGATTTCAACATTC+TGG 0.210934 4:+32602707 MsG0480020038.01.T01:CDS
AATAACTACATCTGTTTCTA+AGG 0.224263 4:-32603208 None:intergenic
CCCATGGAAAATCTGAAAAT+TGG 0.228440 4:-32598702 None:intergenic
CAGAAACTTCCTATTCTTCT+TGG 0.229501 4:-32597146 None:intergenic
CCCGGAGAACACTTCCTTCT+TGG 0.233331 4:+32602786 MsG0480020038.01.T01:CDS
ACACTTCCTTCTTGGCCTTT+TGG 0.237410 4:+32602794 MsG0480020038.01.T01:CDS
AGGTAAGTTTATGCATTCTA+TGG 0.279876 4:+32602384 MsG0480020038.01.T01:CDS
GAAATATCTGCATGTCAAAT+TGG 0.294249 4:+32603072 MsG0480020038.01.T01:CDS
ATGGCAACCTGGGATGATTT+TGG 0.294420 4:+32597349 MsG0480020038.01.T01:CDS
TACCTTTGTTGAGAAATTCT+TGG 0.304695 4:-32598950 None:intergenic
TGTCCTTTGACTTATCCTTT+TGG 0.305518 4:-32597267 None:intergenic
AGTGGTAATGGCAGTAGTTT+TGG 0.313462 4:+32598892 MsG0480020038.01.T01:CDS
ATATGAAGTCATGGGAATTA+TGG 0.316758 4:+32598869 MsG0480020038.01.T01:CDS
CTCCCAGATTTCAACATTCT+GGG 0.325483 4:+32602708 MsG0480020038.01.T01:CDS
ACCATTTGCATTTGCGCATT+CGG 0.341818 4:-32602503 None:intergenic
AAAATTACATTGACAGTTCA+AGG 0.349499 4:+32603292 MsG0480020038.01.T01:CDS
ATGCCCAGAATGTTGAAATC+TGG 0.349568 4:-32602711 None:intergenic
TCTTGAAGAAAACTATGATT+AGG 0.356221 4:-32603051 None:intergenic
GCAACGTTGCAACCAACTTC+TGG 0.356358 4:-32597432 None:intergenic
ATCTGCTTCTTGAATTTGCT+TGG 0.358111 4:-32597313 None:intergenic
CTTTGCATTGGGAAATATAG+TGG 0.362241 4:+32602310 MsG0480020038.01.T01:CDS
ATAACCAGCAATTTACAAAA+TGG 0.362970 4:+32598514 MsG0480020038.01.T01:CDS
ATTCTTGCCACAGGATATAA+AGG 0.366577 4:+32603228 MsG0480020038.01.T01:CDS
AATAAGAGAGTTACAGTAGT+AGG 0.371604 4:+32602451 MsG0480020038.01.T01:CDS
TGCAAATATGCTCTACAGAT+TGG 0.376558 4:+32598583 MsG0480020038.01.T01:CDS
TCTACAACTTGCTTATTACT+TGG 0.392477 4:-32598748 None:intergenic
GGGAGGAACTCAGGAATGTT+TGG 0.394469 4:-32602337 None:intergenic
GTTGCGTCTGTTCTTCAAGT+TGG 0.397064 4:+32597450 MsG0480020038.01.T01:CDS
TTGCGTCTGTTCTTCAAGTT+GGG 0.399463 4:+32597451 MsG0480020038.01.T01:CDS
GCCAAGAAGGAAGTGTTCTC+CGG 0.407386 4:-32602787 None:intergenic
TTGGAATTGAATCTTATGTA+AGG 0.408337 4:-32598808 None:intergenic
AGTATCTAGCCAAGAAGAAT+AGG 0.409928 4:+32597137 MsG0480020038.01.T01:CDS
AAGTTGCCACTGAAGAAGTA+TGG 0.417922 4:+32603021 MsG0480020038.01.T01:CDS
GTTCAAGGATTTCTCTCTAT+AGG 0.419814 4:+32603307 MsG0480020038.01.T01:CDS
TTGTTGAAACATATCTGAAA+TGG 0.425780 4:+32602998 MsG0480020038.01.T01:CDS
ATAATCTATATCAATGACTT+TGG 0.427553 4:-32598827 None:intergenic
AGCTTTAGCTTCTGCAAAGA+AGG 0.430511 4:+32603159 MsG0480020038.01.T01:CDS
GAATCTTATGTAAGGAATGA+TGG 0.442345 4:-32598800 None:intergenic
ATGATGGTGTTGGAGGACTA+TGG 0.447006 4:+32598632 MsG0480020038.01.T01:CDS
AGTTTGTTATTCTTTGCATT+GGG 0.451815 4:+32602299 MsG0480020038.01.T01:CDS
GGCCACTTTACTTTCACCAT+TGG 0.455226 4:+32602815 MsG0480020038.01.T01:CDS
TGTAATATGCCATGTTCCCT+TGG 0.457974 4:-32598917 None:intergenic
GAGTTTGTTATTCTTTGCAT+TGG 0.462117 4:+32602298 MsG0480020038.01.T01:CDS
TTCTATGGATTACTCTGCCT+TGG 0.462649 4:+32602399 MsG0480020038.01.T01:CDS
TTGTGATTTCTTTATCTCGA+TGG 0.463038 4:-32603136 None:intergenic
AACATTCCTGAGTTCCTCCC+TGG 0.466304 4:+32602340 MsG0480020038.01.T01:CDS
CCTGAGTTCCTCCCTGGAAA+AGG 0.469202 4:+32602346 MsG0480020038.01.T01:CDS
TCAATAAAAGAAAACTAGTC+AGG 0.469955 4:-32597474 None:intergenic
TGCTTCAACTGTAAGAAACT+TGG 0.473801 4:+32597217 MsG0480020038.01.T01:CDS
CTCAAAGAGAGAAGATCAGA+AGG 0.475331 4:+32597192 MsG0480020038.01.T01:CDS
TGCCCAGAATGTTGAAATCT+GGG 0.478870 4:-32602710 None:intergenic
TTGGTCACCTTTATATCCTG+TGG 0.488352 4:-32603235 None:intergenic
AGAGTTGCAATTGTTGGTGC+AGG 0.491948 4:+32598541 MsG0480020038.01.T01:CDS
TCATCAGCTTCATATACAAC+AGG 0.497177 4:-32598613 None:intergenic
GTCATTGATATAGATTATGT+TGG 0.502491 4:+32598832 MsG0480020038.01.T01:CDS
AGAGTTACAGTAGTAGGCTC+AGG 0.504894 4:+32602457 MsG0480020038.01.T01:CDS
AACATTCTGGGCATTCGTCT+CGG 0.507223 4:+32602720 MsG0480020038.01.T01:CDS
TGGGAATTATGGAGTGGTAA+TGG 0.517223 4:+32598880 MsG0480020038.01.T01:CDS
GTGAAAGTAAAGTGGCCAAA+AGG 0.517743 4:-32602809 None:intergenic
GCCGAATGCGCAAATGCAAA+TGG 0.517814 4:+32602502 MsG0480020038.01.T01:CDS
ATAGGAAGTTTCTGAACAGA+AGG 0.522889 4:+32597155 MsG0480020038.01.T01:CDS
GGCTAGATACTGAAGTCTGT+TGG 0.523734 4:-32597125 None:intergenic
AAGTGGCCAAAAGGCCAAGA+AGG 0.525815 4:-32602800 None:intergenic
GATGTAGTTATTCTTGCCAC+AGG 0.531258 4:+32603219 MsG0480020038.01.T01:CDS
AGCAGAGTTTAATGGCAACC+TGG 0.532794 4:+32597338 MsG0480020038.01.T01:CDS
CTGATGAAGATATGAAGTCA+TGG 0.535713 4:+32598860 MsG0480020038.01.T01:CDS
GTTCTATTTATAATCGTGCA+AGG 0.542558 4:-32602672 None:intergenic
TATGAAGCTGATGATGGTGT+TGG 0.543117 4:+32598622 MsG0480020038.01.T01:CDS
CCAAGAAGGAAGTGTTCTCC+GGG 0.546254 4:-32602786 None:intergenic
ATAACTACATCTGTTTCTAA+GGG 0.546830 4:-32603207 None:intergenic
AGCAGCAGTTTCTTTGTCCA+AGG 0.547408 4:-32602416 None:intergenic
TGGAAAATCTGAAAATTGGT+AGG 0.552489 4:-32598698 None:intergenic
TGATTGTCTTGATCTCCAAA+AGG 0.553183 4:+32597252 MsG0480020038.01.T01:CDS
GTTGTATATGAAGCTGATGA+TGG 0.564559 4:+32598616 MsG0480020038.01.T01:CDS
GAAGCTGATGATGGTGTTGG+AGG 0.565452 4:+32598625 MsG0480020038.01.T01:CDS
GCAGAGTTTAATGGCAACCT+GGG 0.576363 4:+32597339 MsG0480020038.01.T01:CDS
TACCAATGGTGAAAGTAAAG+TGG 0.578127 4:-32602817 None:intergenic
TACCAAGAATTTCTCAACAA+AGG 0.578314 4:+32598948 MsG0480020038.01.T01:CDS
CCACTCACCAAAATCATCCC+AGG 0.589791 4:-32597356 None:intergenic
TGATGAAGATATGAAGTCAT+GGG 0.593792 4:+32598861 MsG0480020038.01.T01:CDS
CTATTGGAGCCTCTCCTCGA+TGG 0.598846 4:-32597512 None:intergenic
TGGCAGGGCTTCTTGTCGAA+AGG 0.603643 4:+32597376 MsG0480020038.01.T01:CDS
TCTCCAAAAGGATAAGTCAA+AGG 0.616000 4:+32597264 MsG0480020038.01.T01:CDS
TTCTATTTATAATCGTGCAA+GGG 0.618260 4:-32602671 None:intergenic
GAGCATATTTGCAAGCAAGT+AGG 0.621227 4:-32598573 None:intergenic
ATTGTTGGTGCAGGAATCAG+TGG 0.624826 4:+32598550 MsG0480020038.01.T01:CDS
ACTAGTCCATACTTCTTCAG+TGG 0.645916 4:-32603027 None:intergenic
TCAAAGAGAGAAGATCAGAA+GGG 0.647505 4:+32597193 MsG0480020038.01.T01:CDS
TGGCTAATACCATCGAGGAG+AGG 0.658621 4:+32597503 MsG0480020038.01.T01:CDS
TTATAAATAGAACTTCACAC+TGG 0.667245 4:+32602682 MsG0480020038.01.T01:CDS
AAGTCATGGGAATTATGGAG+TGG 0.671476 4:+32598874 MsG0480020038.01.T01:CDS
GGGAACATGGCATATTACAG+TGG 0.699925 4:+32598921 MsG0480020038.01.T01:CDS
AGCTTTGGCTAATACCATCG+AGG 0.737336 4:+32597498 MsG0480020038.01.T01:CDS
ATGGTGTTGGAGGACTATGG+AGG 0.798552 4:+32598635 MsG0480020038.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTTGCATATTAAAAAA+TGG - Chr4:32599594-32599613 None:intergenic 10.0%
!! TCTTACAAAAATATATAAAT+TGG - Chr4:32602910-32602929 None:intergenic 10.0%
!!! AATGAATTTTATTTTATTAC+GGG + Chr4:32597689-32597708 MsG0480020038.01.T01:intron 10.0%
!!! CTTTAACTTATATATTAATA+TGG + Chr4:32598092-32598111 MsG0480020038.01.T01:intron 10.0%
!!! TATTTTAGTTAACATTAATT+GGG + Chr4:32599819-32599838 MsG0480020038.01.T01:intron 10.0%
!!! TTATTTTAGTTAACATTAAT+TGG + Chr4:32599818-32599837 MsG0480020038.01.T01:intron 10.0%
!! AAAAATCAATGTGATTATTT+GGG - Chr4:32600530-32600549 None:intergenic 15.0%
!! AAAATTAACTCATTAATTGT+CGG + Chr4:32600386-32600405 MsG0480020038.01.T01:intron 15.0%
!! ATTATAATGTTAGTTATCTT+TGG + Chr4:32601440-32601459 MsG0480020038.01.T01:intron 15.0%
!! GTATAATAATATGCATAAAT+TGG + Chr4:32600996-32601015 MsG0480020038.01.T01:intron 15.0%
!! TAAAAAAAAAAAAATTGGTG+TGG - Chr4:32597824-32597843 None:intergenic 15.0%
!! TAAAAATCAATGTGATTATT+TGG - Chr4:32600531-32600550 None:intergenic 15.0%
!! TACAAAAGTTAGTATATTAA+TGG - Chr4:32600257-32600276 None:intergenic 15.0%
!! TACACTAATATCTATATATA+TGG + Chr4:32601627-32601646 MsG0480020038.01.T01:intron 15.0%
!! TGATTAAAATTGTGTATTTA+TGG + Chr4:32599312-32599331 MsG0480020038.01.T01:intron 15.0%
!! TTTGTTGAATTATAAGATTA+AGG + Chr4:32600197-32600216 MsG0480020038.01.T01:intron 15.0%
!!! AAATATATGTTTTGAAAAAG+TGG - Chr4:32601418-32601437 None:intergenic 15.0%
!!! AACTAAGGATTTTTTTTTAA+AGG + Chr4:32601516-32601535 MsG0480020038.01.T01:intron 15.0%
!!! TGAATGTTGATATTTTTTTA+AGG + Chr4:32601689-32601708 MsG0480020038.01.T01:intron 15.0%
!!! TTCATATTTCATTTTCTTTT+TGG + Chr4:32599003-32599022 MsG0480020038.01.T01:intron 15.0%
!!! TTTTACTTGTATATTAGTAA+GGG + Chr4:32598036-32598055 MsG0480020038.01.T01:intron 15.0%
!!! TTTTTACTTGTATATTAGTA+AGG + Chr4:32598035-32598054 MsG0480020038.01.T01:intron 15.0%
!! AAACAAAAGAAATCAATCAT+AGG + Chr4:32599619-32599638 MsG0480020038.01.T01:intron 20.0%
!! AAATTATTGTTGTATTGCAA+AGG - Chr4:32602238-32602257 None:intergenic 20.0%
!! AACATTAATTGGGAAATATT+GGG + Chr4:32599829-32599848 MsG0480020038.01.T01:intron 20.0%
!! AAGCATATCACAATTTATTA+AGG + Chr4:32601182-32601201 MsG0480020038.01.T01:intron 20.0%
!! AATTATTGTTGTATTGCAAA+GGG - Chr4:32602237-32602256 None:intergenic 20.0%
!! AGAGATAAATAAAGGAAATA+TGG + Chr4:32599099-32599118 MsG0480020038.01.T01:intron 20.0%
!! ATAATCTATATCAATGACTT+TGG - Chr4:32598830-32598849 None:intergenic 20.0%
!! GAATTATAAGATTAAGGTTA+AGG + Chr4:32600203-32600222 MsG0480020038.01.T01:intron 20.0%
!! GTGAATTTGAAAAAATAATG+TGG + Chr4:32600596-32600615 MsG0480020038.01.T01:intron 20.0%
!! TAACATTAATTGGGAAATAT+TGG + Chr4:32599828-32599847 MsG0480020038.01.T01:intron 20.0%
!! TAAGACAAAATTAACATTAG+AGG - Chr4:32601667-32601686 None:intergenic 20.0%
!! TCAAAAATCAAGATACAATA+CGG + Chr4:32599514-32599533 MsG0480020038.01.T01:intron 20.0%
!! TGAAAATTGAATATATTCTG+CGG - Chr4:32602082-32602101 None:intergenic 20.0%
!! TGCTTAAATATATCATTAGT+CGG + Chr4:32600087-32600106 MsG0480020038.01.T01:intron 20.0%
!! TTGTTTATGATAAATAATCC+TGG + Chr4:32597758-32597777 MsG0480020038.01.T01:intron 20.0%
!! TTTACTTGTATATTAGTAAG+GGG + Chr4:32598037-32598056 MsG0480020038.01.T01:intron 20.0%
!! TTTCATAATTACAAATGTGT+TGG + Chr4:32599030-32599049 MsG0480020038.01.T01:intron 20.0%
!!! AAAATTAACTTGTCTTTTTC+TGG + Chr4:32601594-32601613 MsG0480020038.01.T01:intron 20.0%
!!! CAAAAAAATCTTGATAATTG+TGG + Chr4:32601795-32601814 MsG0480020038.01.T01:intron 20.0%
!!! GTGTTGTTATTTAATTTAGT+AGG - Chr4:32600855-32600874 None:intergenic 20.0%
!!! GTTACGAGATTTTTTTTTTT+AGG - Chr4:32599270-32599289 None:intergenic 20.0%
!!! TCAATGTAATTTTGGAATAT+TGG - Chr4:32603285-32603304 None:intergenic 20.0%
!!! TCAATTGACTTTTGATTATT+AGG - Chr4:32600877-32600896 None:intergenic 20.0%
!!! TGAATATGCTTTTAAGTTTT+TGG - Chr4:32603257-32603276 None:intergenic 20.0%
!!! TTCTTTTACTTTGTCAAAAA+AGG - Chr4:32603112-32603131 None:intergenic 20.0%
!!! TTTTCTTTTATTGAAAGCTT+TGG + Chr4:32597483-32597502 MsG0480020038.01.T01:CDS 20.0%
!!! TTTTTTGACAAAGTAAAAGA+AGG + Chr4:32603111-32603130 MsG0480020038.01.T01:CDS 20.0%
! AAAATTACATTGACAGTTCA+AGG + Chr4:32603292-32603311 MsG0480020038.01.T01:CDS 25.0%
! AAAATTGAATATATTCTGCG+GGG - Chr4:32602080-32602099 None:intergenic 25.0%
! AAGATATTAACATGCAATCA+CGG + Chr4:32602199-32602218 MsG0480020038.01.T01:intron 25.0%
! AAGTTAAAGCAAAGTTTGTA+AGG - Chr4:32602115-32602134 None:intergenic 25.0%
! ACATTAATTGGGAAATATTG+GGG + Chr4:32599830-32599849 MsG0480020038.01.T01:intron 25.0%
! ATAACCAGCAATTTACAAAA+TGG + Chr4:32598514-32598533 MsG0480020038.01.T01:CDS 25.0%
! ATAATGTTAGTTATCTTTGG+CGG + Chr4:32601443-32601462 MsG0480020038.01.T01:intron 25.0%
! ATATAAGCTGTTTATCCAAA+CGG + Chr4:32602010-32602029 MsG0480020038.01.T01:intron 25.0%
! ATCATAGTCTTTATAGACAA+AGG + Chr4:32600649-32600668 MsG0480020038.01.T01:intron 25.0%
! ATTGTATGCTACTAAAACAA+AGG - Chr4:32600717-32600736 None:intergenic 25.0%
! CTTCACAAATTATCATCTAT+GGG - Chr4:32599434-32599453 None:intergenic 25.0%
! CTTGATAAGCTATTTATGTT+TGG - Chr4:32601934-32601953 None:intergenic 25.0%
! GAAAATTGAATATATTCTGC+GGG - Chr4:32602081-32602100 None:intergenic 25.0%
! GAAACGTTAGAGATAAATAA+AGG + Chr4:32599091-32599110 MsG0480020038.01.T01:intron 25.0%
! GTCATTGATATAGATTATGT+TGG + Chr4:32598832-32598851 MsG0480020038.01.T01:CDS 25.0%
! TCAATAAAAGAAAACTAGTC+AGG - Chr4:32597477-32597496 None:intergenic 25.0%
! TCTTGAAGAAAACTATGATT+AGG - Chr4:32603054-32603073 None:intergenic 25.0%
! TTACTTGTATATTAGTAAGG+GGG + Chr4:32598038-32598057 MsG0480020038.01.T01:intron 25.0%
! TTATAAATAGAACTTCACAC+TGG + Chr4:32602682-32602701 MsG0480020038.01.T01:CDS 25.0%
! TTATGGTATTACAGTCATAA+TGG - Chr4:32600128-32600147 None:intergenic 25.0%
! TTCAATCCATTAATTTCTAC+AGG + Chr4:32602639-32602658 MsG0480020038.01.T01:intron 25.0%
! TTCACAAATTATCATCTATG+GGG - Chr4:32599433-32599452 None:intergenic 25.0%
! TTCTATTTATAATCGTGCAA+GGG - Chr4:32602674-32602693 None:intergenic 25.0%
! TTGATAAAGTATACCACTAA+CGG - Chr4:32599744-32599763 None:intergenic 25.0%
! TTGGAATTGAATCTTATGTA+AGG - Chr4:32598811-32598830 None:intergenic 25.0%
! TTGTTGAAACATATCTGAAA+TGG + Chr4:32602998-32603017 MsG0480020038.01.T01:CDS 25.0%
!! AATCTAAATTTTCAGAGATG+GGG + Chr4:32602964-32602983 MsG0480020038.01.T01:intron 25.0%
!! CAATCTAAATTTTCAGAGAT+GGG + Chr4:32602963-32602982 MsG0480020038.01.T01:intron 25.0%
!! TCTCGAGTAAAACTATATTT+TGG - Chr4:32599163-32599182 None:intergenic 25.0%
!! TTGAACTGTCAATGTAATTT+TGG - Chr4:32603293-32603312 None:intergenic 25.0%
!! TTTTCCATTTTGTAAATTGC+TGG - Chr4:32598521-32598540 None:intergenic 25.0%
!!! AATAACTACATCTGTTTCTA+AGG - Chr4:32603211-32603230 None:intergenic 25.0%
!!! AGTTTGTTATTCTTTGCATT+GGG + Chr4:32602299-32602318 MsG0480020038.01.T01:CDS 25.0%
!!! ATAACTACATCTGTTTCTAA+GGG - Chr4:32603210-32603229 None:intergenic 25.0%
!!! CGTCATCCATTTTTAAATAT+CGG + Chr4:32600017-32600036 MsG0480020038.01.T01:intron 25.0%
!!! GTCATCCATTTTTAAATATC+GGG + Chr4:32600018-32600037 MsG0480020038.01.T01:intron 25.0%
!!! TCATCCATTTTTAAATATCG+GGG + Chr4:32600019-32600038 MsG0480020038.01.T01:intron 25.0%
AAATCACTACCGTATATATG+AGG - Chr4:32597587-32597606 None:intergenic 30.0%
AACTTACCTGTAAAAACTTC+TGG - Chr4:32602373-32602392 None:intergenic 30.0%
AATAAGAGAGTTACAGTAGT+AGG + Chr4:32602451-32602470 MsG0480020038.01.T01:CDS 30.0%
ACAGCTTATATAGATGCTTA+TGG - Chr4:32602001-32602020 None:intergenic 30.0%
ACTTACCTGTAAAAACTTCT+GGG - Chr4:32602372-32602391 None:intergenic 30.0%
ACTTTGTCAAAAAAGGAATC+AGG - Chr4:32603105-32603124 None:intergenic 30.0%
AGAAAATGGCATAGAAATGA+AGG - Chr4:32600417-32600436 None:intergenic 30.0%
AGGTAAGTTTATGCATTCTA+TGG + Chr4:32602384-32602403 MsG0480020038.01.T01:CDS 30.0%
ATAGACAAAGGAAAAAGATC+TGG + Chr4:32600661-32600680 MsG0480020038.01.T01:intron 30.0%
ATATAGATGCTTATGGCATT+AGG - Chr4:32601994-32602013 None:intergenic 30.0%
ATATGAAGTCATGGGAATTA+TGG + Chr4:32598869-32598888 MsG0480020038.01.T01:CDS 30.0%
CAAAGTTTGTAAGGACATAT+TGG - Chr4:32602106-32602125 None:intergenic 30.0%
CTTTGTCAAAAAAGGAATCA+GGG - Chr4:32603104-32603123 None:intergenic 30.0%
GAAATATCTGCATGTCAAAT+TGG + Chr4:32603072-32603091 MsG0480020038.01.T01:CDS 30.0%
GAATCTTATGTAAGGAATGA+TGG - Chr4:32598803-32598822 None:intergenic 30.0%
GACTGAATGTTTACAATAAC+AGG + Chr4:32602264-32602283 MsG0480020038.01.T01:intron 30.0%
GCTTCACAAATTATCATCTA+TGG - Chr4:32599435-32599454 None:intergenic 30.0%
GTATCTTACATTCTTACCAA+TGG - Chr4:32602834-32602853 None:intergenic 30.0%
GTGATTCCTGTAGAAATTAA+TGG - Chr4:32602648-32602667 None:intergenic 30.0%
GTTCTATTTATAATCGTGCA+AGG - Chr4:32602675-32602694 None:intergenic 30.0%
TACCAAGAATTTCTCAACAA+AGG + Chr4:32598948-32598967 MsG0480020038.01.T01:CDS 30.0%
TACCTTTGTTGAGAAATTCT+TGG - Chr4:32598953-32598972 None:intergenic 30.0%
TATAAGCTGTTTATCCAAAC+GGG + Chr4:32602011-32602030 MsG0480020038.01.T01:intron 30.0%
TATAGATGCTTATGGCATTA+GGG - Chr4:32601993-32602012 None:intergenic 30.0%
TATCGGTGCATGATAATTAT+CGG + Chr4:32599857-32599876 MsG0480020038.01.T01:intron 30.0%
TCACAAATTATCATCTATGG+GGG - Chr4:32599432-32599451 None:intergenic 30.0%
TCATCTGCCACATTAATTTA+TGG + Chr4:32600287-32600306 MsG0480020038.01.T01:intron 30.0%
TGATGAAGATATGAAGTCAT+GGG + Chr4:32598861-32598880 MsG0480020038.01.T01:CDS 30.0%
TGGAAAATCTGAAAATTGGT+AGG - Chr4:32598701-32598720 None:intergenic 30.0%
TTGTGATTTCTTTATCTCGA+TGG - Chr4:32603139-32603158 None:intergenic 30.0%
! ACACCTTTAAAAAGGCTTAT+AGG - Chr4:32601254-32601273 None:intergenic 30.0%
! ACATCAATTCGACATGTTTT+TGG + Chr4:32600819-32600838 MsG0480020038.01.T01:intron 30.0%
! ACCAATTTTCAGATTTTCCA+TGG + Chr4:32598701-32598720 MsG0480020038.01.T01:CDS 30.0%
! ACTCCTATAAGCCTTTTTAA+AGG + Chr4:32601248-32601267 MsG0480020038.01.T01:intron 30.0%
! CCAATTTTCAGATTTTCCAT+GGG + Chr4:32598702-32598721 MsG0480020038.01.T01:CDS 30.0%
! GCAATCTAAATTTTCAGAGA+TGG + Chr4:32602962-32602981 MsG0480020038.01.T01:intron 30.0%
! TCTAACTTCTCCTTTTCTTT+TGG - Chr4:32600687-32600706 None:intergenic 30.0%
! TCTACAACTTGCTTATTACT+TGG - Chr4:32598751-32598770 None:intergenic 30.0%
! TTACCCAAACACCTTTAAAA+AGG - Chr4:32601262-32601281 None:intergenic 30.0%
! TTTGAGGTTCCTCATATATA+CGG + Chr4:32597575-32597594 MsG0480020038.01.T01:intron 30.0%
!! AAAATTGGTAGGCTTGTTTT+CGG - Chr4:32598690-32598709 None:intergenic 30.0%
!! GAGTTTGTTATTCTTTGCAT+TGG + Chr4:32602298-32602317 MsG0480020038.01.T01:CDS 30.0%
!!! AAGCCTTTTTAAAGGTGTTT+GGG + Chr4:32601256-32601275 MsG0480020038.01.T01:intron 30.0%
!!! AGTACTGATGTGTTCTTTTT+TGG - Chr4:32599787-32599806 None:intergenic 30.0%
!!! TAAGCCTTTTTAAAGGTGTT+TGG + Chr4:32601255-32601274 MsG0480020038.01.T01:intron 30.0%
!!! TTGGATTAGTGCTTCTTTTT+TGG - Chr4:32599768-32599787 None:intergenic 30.0%
AAAGATCTGGCCAAAAGAAA+AGG + Chr4:32600674-32600693 MsG0480020038.01.T01:intron 35.0%
AAATCAAGATACAATACGGC+TGG + Chr4:32599518-32599537 MsG0480020038.01.T01:intron 35.0%
AAGACAGTGCAAATAGCAAT+AGG + Chr4:32600900-32600919 MsG0480020038.01.T01:intron 35.0%
AATCAAGATACAATACGGCT+GGG + Chr4:32599519-32599538 MsG0480020038.01.T01:intron 35.0%
ACAAGACGTTCCTACTAATA+CGG - Chr4:32597742-32597761 None:intergenic 35.0%
AGAAAAGGAGAAGTTAGAGA+AGG + Chr4:32600689-32600708 MsG0480020038.01.T01:intron 35.0%
AGCAATTGAACTATCTACCT+TGG + Chr4:32600791-32600810 MsG0480020038.01.T01:intron 35.0%
AGTACTGCTAAGTGTTAGAT+GGG + Chr4:32597533-32597552 MsG0480020038.01.T01:intron 35.0%
AGTATCTAGCCAAGAAGAAT+AGG + Chr4:32597137-32597156 MsG0480020038.01.T01:CDS 35.0%
ATAAGCTGTTTATCCAAACG+GGG + Chr4:32602012-32602031 MsG0480020038.01.T01:intron 35.0%
ATAGGAAGTTTCTGAACAGA+AGG + Chr4:32597155-32597174 MsG0480020038.01.T01:CDS 35.0%
ATCTGGACTCACAATATTAG+TGG - Chr4:32598400-32598419 None:intergenic 35.0%
ATTCTTGCCACAGGATATAA+AGG + Chr4:32603228-32603247 MsG0480020038.01.T01:CDS 35.0%
ATTGAACTATCTACCTTGGT+TGG + Chr4:32600795-32600814 MsG0480020038.01.T01:intron 35.0%
CACAAATTATCATCTATGGG+GGG - Chr4:32599431-32599450 None:intergenic 35.0%
CAGAAACTTCCTATTCTTCT+TGG - Chr4:32597149-32597168 None:intergenic 35.0%
CCCATGGAAAATCTGAAAAT+TGG - Chr4:32598705-32598724 None:intergenic 35.0%
CTAACACTTAGCAGTACTAT+TGG - Chr4:32597531-32597550 None:intergenic 35.0%
CTGATGAAGATATGAAGTCA+TGG + Chr4:32598860-32598879 MsG0480020038.01.T01:CDS 35.0%
CTGTGGACCATAAATTAATG+TGG - Chr4:32600297-32600316 None:intergenic 35.0%
CTTTGCATTGGGAAATATAG+TGG + Chr4:32602310-32602329 MsG0480020038.01.T01:CDS 35.0%
GAAGCCCCGATATTTAAAAA+TGG - Chr4:32600026-32600045 None:intergenic 35.0%
GATAAATAATCCTGGTCACA+GGG + Chr4:32597766-32597785 MsG0480020038.01.T01:intron 35.0%
GCAGATTAAGCAGAGTTTAA+TGG + Chr4:32597330-32597349 MsG0480020038.01.T01:CDS 35.0%
GGAAAAAGAGTTGCAATTGT+TGG + Chr4:32598535-32598554 MsG0480020038.01.T01:CDS 35.0%
GTTCAAGGATTTCTCTCTAT+AGG + Chr4:32603307-32603326 MsG0480020038.01.T01:CDS 35.0%
GTTGTATATGAAGCTGATGA+TGG + Chr4:32598616-32598635 MsG0480020038.01.T01:CDS 35.0%
TAAAGTAACGCACGTAACTA+AGG + Chr4:32601501-32601520 MsG0480020038.01.T01:intron 35.0%
TACCAATGGTGAAAGTAAAG+TGG - Chr4:32602820-32602839 None:intergenic 35.0%
TAGTACTGCTAAGTGTTAGA+TGG + Chr4:32597532-32597551 MsG0480020038.01.T01:intron 35.0%
TATATAAGTGGTACACCCAA+AGG - Chr4:32597613-32597632 None:intergenic 35.0%
TCAAACTAAGCCAATCGAAA+GGG - Chr4:32601210-32601229 None:intergenic 35.0%
TCAAAGAGAGAAGATCAGAA+GGG + Chr4:32597193-32597212 MsG0480020038.01.T01:CDS 35.0%
TCATCAGCTTCATATACAAC+AGG - Chr4:32598616-32598635 None:intergenic 35.0%
TCTCCAAAAGGATAAGTCAA+AGG + Chr4:32597264-32597283 MsG0480020038.01.T01:CDS 35.0%
TCTGGACTCACAATATTAGT+GGG - Chr4:32598399-32598418 None:intergenic 35.0%
TGATAAATAATCCTGGTCAC+AGG + Chr4:32597765-32597784 MsG0480020038.01.T01:intron 35.0%
TGATTGTCTTGATCTCCAAA+AGG + Chr4:32597252-32597271 MsG0480020038.01.T01:CDS 35.0%
TGCAAATATGCTCTACAGAT+TGG + Chr4:32598583-32598602 MsG0480020038.01.T01:CDS 35.0%
TGCTATACTATATCCGTTAG+TGG + Chr4:32599728-32599747 MsG0480020038.01.T01:intron 35.0%
TGCTTCAACTGTAAGAAACT+TGG + Chr4:32597217-32597236 MsG0480020038.01.T01:CDS 35.0%
TGGTGCAAAAGGAAAAATTG+AGG + Chr4:32600953-32600972 MsG0480020038.01.T01:intron 35.0%
TTGGGTGTACCACTTATATA+CGG + Chr4:32597613-32597632 MsG0480020038.01.T01:intron 35.0%
! ACAGGTGATGATGAAACAAA+GGG + Chr4:32600046-32600065 MsG0480020038.01.T01:intron 35.0%
! AGATGATAATTTGTGAAGCC+CGG + Chr4:32599436-32599455 MsG0480020038.01.T01:intron 35.0%
! ATCTGCTTCTTGAATTTGCT+TGG - Chr4:32597316-32597335 None:intergenic 35.0%
! CCACTCATAAAATTCAGGTT+GGG - Chr4:32601084-32601103 None:intergenic 35.0%
! TAAATTTTCAGCTTACCCTC+CGG + Chr4:32601341-32601360 MsG0480020038.01.T01:intron 35.0%
! TCTTTTACAGAAGAATCCCA+TGG - Chr4:32598721-32598740 None:intergenic 35.0%
!! ATTTTACCGTATCGACGTAT+CGG - Chr4:32599493-32599512 None:intergenic 35.0%
!! TACAAAGTGCCGTATATAAG+TGG - Chr4:32597625-32597644 None:intergenic 35.0%
!! TAGACATGCATTGATTCGTT+GGG + Chr4:32600760-32600779 MsG0480020038.01.T01:intron 35.0%
!! TGTCCTTTGACTTATCCTTT+TGG - Chr4:32597270-32597289 None:intergenic 35.0%
!! TTAGACATGCATTGATTCGT+TGG + Chr4:32600759-32600778 MsG0480020038.01.T01:intron 35.0%
AAACTAAGCCAATCGAAAGG+GGG - Chr4:32601208-32601227 None:intergenic 40.0%
AAGTCATGGGAATTATGGAG+TGG + Chr4:32598874-32598893 MsG0480020038.01.T01:CDS 40.0%
AAGTTGCCACTGAAGAAGTA+TGG + Chr4:32603021-32603040 MsG0480020038.01.T01:CDS 40.0%
AATACTTCCCGATACGTATC+AGG - Chr4:32599890-32599909 None:intergenic 40.0%
ACCATTTGCATTTGCGCATT+CGG - Chr4:32602506-32602525 None:intergenic 40.0%
ACTAGTCCATACTTCTTCAG+TGG - Chr4:32603030-32603049 None:intergenic 40.0%
ATACTCTCCTGATACGTATC+AGG + Chr4:32599880-32599899 MsG0480020038.01.T01:intron 40.0%
ATACTCTCCTGATACGTATC+GGG + Chr4:32599880-32599899 MsG0480020038.01.T01:intron 40.0%
ATGCCCAGAATGTTGAAATC+TGG - Chr4:32602714-32602733 None:intergenic 40.0%
CAAAAACATCAGCCAGAAGT+TGG + Chr4:32597420-32597439 MsG0480020038.01.T01:CDS 40.0%
CAAACTAAGCCAATCGAAAG+GGG - Chr4:32601209-32601228 None:intergenic 40.0%
CTCAAACTAAGCCAATCGAA+AGG - Chr4:32601211-32601230 None:intergenic 40.0%
CTCAAAGAGAGAAGATCAGA+AGG + Chr4:32597192-32597211 MsG0480020038.01.T01:CDS 40.0%
CTCCCAGATTTCAACATTCT+GGG + Chr4:32602708-32602727 MsG0480020038.01.T01:CDS 40.0%
CTGGACTCACAATATTAGTG+GGG - Chr4:32598398-32598417 None:intergenic 40.0%
GAAGTTGAGTTTGCACTCTT+AGG - Chr4:32602038-32602057 None:intergenic 40.0%
GACAGCCACTCATAAAATTC+AGG - Chr4:32601089-32601108 None:intergenic 40.0%
GAGCATATTTGCAAGCAAGT+AGG - Chr4:32598576-32598595 None:intergenic 40.0%
GATACTCTCCTGATACGTAT+CGG + Chr4:32599879-32599898 MsG0480020038.01.T01:intron 40.0%
GATGTAGTTATTCTTGCCAC+AGG + Chr4:32603219-32603238 MsG0480020038.01.T01:CDS 40.0%
GCCACTCATAAAATTCAGGT+TGG - Chr4:32601085-32601104 None:intergenic 40.0%
GGAGGGTAAGCTGAAAATTT+AGG - Chr4:32601342-32601361 None:intergenic 40.0%
GTGAAAGTAAAGTGGCCAAA+AGG - Chr4:32602812-32602831 None:intergenic 40.0%
TAATTGGGAAATATTGGGGC+AGG + Chr4:32599834-32599853 MsG0480020038.01.T01:intron 40.0%
TCATAAGCTCCTTGTTAAGC+CGG - Chr4:32601363-32601382 None:intergenic 40.0%
TCCGTATCATATCTCGTATC+CGG - Chr4:32599458-32599477 None:intergenic 40.0%
TCTCCCAGATTTCAACATTC+TGG + Chr4:32602707-32602726 MsG0480020038.01.T01:CDS 40.0%
TGCCCAGAATGTTGAAATCT+GGG - Chr4:32602713-32602732 None:intergenic 40.0%
TGGAAAATTCCAAGATGTGC+AGG + Chr4:32601016-32601035 MsG0480020038.01.T01:intron 40.0%
TGGGAATTATGGAGTGGTAA+TGG + Chr4:32598880-32598899 MsG0480020038.01.T01:CDS 40.0%
TGTAATATGCCATGTTCCCT+TGG - Chr4:32598920-32598939 None:intergenic 40.0%
TTGGTCACCTTTATATCCTG+TGG - Chr4:32603238-32603257 None:intergenic 40.0%
TTTAAATATCGGGGCTTCAC+AGG + Chr4:32600028-32600047 MsG0480020038.01.T01:intron 40.0%
! AAAGGCCCAGAAGTTTTTAC+AGG + Chr4:32602364-32602383 MsG0480020038.01.T01:CDS 40.0%
! AGCTTTAGCTTCTGCAAAGA+AGG + Chr4:32603159-32603178 MsG0480020038.01.T01:CDS 40.0%
! CACAGGTGATGATGAAACAA+AGG + Chr4:32600045-32600064 MsG0480020038.01.T01:intron 40.0%
! CCCAACCTGAATTTTATGAG+TGG + Chr4:32601081-32601100 MsG0480020038.01.T01:intron 40.0%
! CGGATATAGTATAGCACTGA+TGG - Chr4:32599724-32599743 None:intergenic 40.0%
! GGCTTAGTTTGAGCTTATGT+GGG + Chr4:32601218-32601237 MsG0480020038.01.T01:intron 40.0%
! GTGATGATGAAACAAAGGGA+TGG + Chr4:32600050-32600069 MsG0480020038.01.T01:intron 40.0%
! GTGTTAGATGGGTGTGTTTT+TGG + Chr4:32597544-32597563 MsG0480020038.01.T01:intron 40.0%
! TGATACGTATCAGGAAGTAC+CGG + Chr4:32599958-32599977 MsG0480020038.01.T01:intron 40.0%
! TGATACGTATCGGGAAGTAT+TGG + Chr4:32599889-32599908 MsG0480020038.01.T01:intron 40.0%
! TGGCTTAGTTTGAGCTTATG+TGG + Chr4:32601217-32601236 MsG0480020038.01.T01:intron 40.0%
! TTCTATGGATTACTCTGCCT+TGG + Chr4:32602399-32602418 MsG0480020038.01.T01:CDS 40.0%
! TTGCGTCTGTTCTTCAAGTT+GGG + Chr4:32597451-32597470 MsG0480020038.01.T01:CDS 40.0%
!! AGACATGCATTGATTCGTTG+GGG + Chr4:32600761-32600780 MsG0480020038.01.T01:intron 40.0%
!! TATGAAGCTGATGATGGTGT+TGG + Chr4:32598622-32598641 MsG0480020038.01.T01:CDS 40.0%
!!! AGATGGGTGTGTTTTTGGAA+GGG + Chr4:32597549-32597568 MsG0480020038.01.T01:intron 40.0%
!!! AGTGGTAATGGCAGTAGTTT+TGG + Chr4:32598892-32598911 MsG0480020038.01.T01:CDS 40.0%
!!! GAACTTTTAGTTCACAAGCC+CGG + Chr4:32602768-32602787 MsG0480020038.01.T01:CDS 40.0%
!!! TAGATGGGTGTGTTTTTGGA+AGG + Chr4:32597548-32597567 MsG0480020038.01.T01:intron 40.0%
AACATTCTGGGCATTCGTCT+CGG + Chr4:32602720-32602739 MsG0480020038.01.T01:CDS 45.0%
AACCAACTTGACACTCGTAC+AGG + Chr4:32601131-32601150 MsG0480020038.01.T01:intron 45.0%
AACTGAGCCTCCGTATTAGT+AGG + Chr4:32597729-32597748 MsG0480020038.01.T01:intron 45.0%
AATAATCCTGGTCACAGGGA+CGG + Chr4:32597770-32597789 MsG0480020038.01.T01:intron 45.0%
AATGACCATTGACCAGGCAA+GGG - Chr4:32598426-32598445 None:intergenic 45.0%
ACGCAATAGCATTCTGAGTC+AGG + Chr4:32600349-32600368 MsG0480020038.01.T01:intron 45.0%
ACGGTAGTGATTTCCACCTT+TGG + Chr4:32597594-32597613 MsG0480020038.01.T01:intron 45.0%
AGACGTTCCTACTAATACGG+AGG - Chr4:32597739-32597758 None:intergenic 45.0%
AGAGTTACAGTAGTAGGCTC+AGG + Chr4:32602457-32602476 MsG0480020038.01.T01:CDS 45.0%
AGAGTTGCAATTGTTGGTGC+AGG + Chr4:32598541-32598560 MsG0480020038.01.T01:CDS 45.0%
AGCAGAGTTTAATGGCAACC+TGG + Chr4:32597338-32597357 MsG0480020038.01.T01:CDS 45.0%
AGCAGCAGTTTCTTTGTCCA+AGG - Chr4:32602419-32602438 None:intergenic 45.0%
ATAAGTGGTACACCCAAAGG+TGG - Chr4:32597610-32597629 None:intergenic 45.0%
ATGTCCGTATCATAGTCTGC+TGG + Chr4:32600933-32600952 MsG0480020038.01.T01:intron 45.0%
ATTGTTGGTGCAGGAATCAG+TGG + Chr4:32598550-32598569 MsG0480020038.01.T01:CDS 45.0%
CACACCATGTTGAACATCTG+TGG - Chr4:32600314-32600333 None:intergenic 45.0%
CACAGATGTTCAACATGGTG+TGG + Chr4:32600312-32600331 MsG0480020038.01.T01:intron 45.0%
CCCGGATACGAGATATGATA+CGG + Chr4:32599454-32599473 MsG0480020038.01.T01:intron 45.0%
CCGTATCATATCTCGTATCC+GGG - Chr4:32599457-32599476 None:intergenic 45.0%
CGGTAGTGATTTCCACCTTT+GGG + Chr4:32597595-32597614 MsG0480020038.01.T01:intron 45.0%
GATCTAGAGAGAATCGAAGG+AGG - Chr4:32601396-32601415 None:intergenic 45.0%
GCAGAGTTTAATGGCAACCT+GGG + Chr4:32597339-32597358 MsG0480020038.01.T01:CDS 45.0%
GGAAATATTGGGGCAGGTAT+CGG + Chr4:32599840-32599859 MsG0480020038.01.T01:intron 45.0%
GGCTAGATACTGAAGTCTGT+TGG - Chr4:32597128-32597147 None:intergenic 45.0%
GGGAACATGGCATATTACAG+TGG + Chr4:32598921-32598940 MsG0480020038.01.T01:CDS 45.0%
GGTACTTCCTGATACGTATC+AGG - Chr4:32599959-32599978 None:intergenic 45.0%
GTGGATCTAGAGAGAATCGA+AGG - Chr4:32601399-32601418 None:intergenic 45.0%
GTTGCGTCTGTTCTTCAAGT+TGG + Chr4:32597450-32597469 MsG0480020038.01.T01:CDS 45.0%
TACCAACTGAGCTAAGCTCA+CGG + Chr4:32597921-32597940 MsG0480020038.01.T01:intron 45.0%
TATTAAGGCCCCCTTTCGAT+TGG + Chr4:32601197-32601216 MsG0480020038.01.T01:intron 45.0%
TCATAGTCTGCTGGTGCAAA+AGG + Chr4:32600942-32600961 MsG0480020038.01.T01:intron 45.0%
TCGAATTGATGTGCCAACCA+AGG - Chr4:32600811-32600830 None:intergenic 45.0%
TGAACCAATGACCATTGACC+AGG - Chr4:32598432-32598451 None:intergenic 45.0%
TGATGCACTCAGATAGATGC+AGG - Chr4:32598485-32598504 None:intergenic 45.0%
TGCACCAGCAGACTATGATA+CGG - Chr4:32600940-32600959 None:intergenic 45.0%
TGGTCCACAGATGTTCAACA+TGG + Chr4:32600307-32600326 MsG0480020038.01.T01:intron 45.0%
TTAGCAGAATACCCGTGCAT+AGG - Chr4:32598303-32598322 None:intergenic 45.0%
! AAAACTTCTGGGCCTTTTCC+AGG - Chr4:32602361-32602380 None:intergenic 45.0%
! AAACTTCTGGGCCTTTTCCA+GGG - Chr4:32602360-32602379 None:intergenic 45.0%
! AGCAACCGAGTTTTCCCTTT+CGG + Chr4:32599399-32599418 MsG0480020038.01.T01:intron 45.0%
! AGCTTTGGCTAATACCATCG+AGG + Chr4:32597498-32597517 MsG0480020038.01.T01:CDS 45.0%
! ATGATGGTGTTGGAGGACTA+TGG + Chr4:32598632-32598651 MsG0480020038.01.T01:CDS 45.0%
! ATGGCAACCTGGGATGATTT+TGG + Chr4:32597349-32597368 MsG0480020038.01.T01:CDS 45.0%
! GGCCACTTTACTTTCACCAT+TGG + Chr4:32602815-32602834 MsG0480020038.01.T01:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - Chr4:32597921-32597940 None:intergenic 45.0%
!! ACACTTCCTTCTTGGCCTTT+TGG + Chr4:32602794-32602813 MsG0480020038.01.T01:CDS 45.0%
!! ATACGGAGGCTCAGTTTTGT+AGG - Chr4:32597725-32597744 None:intergenic 45.0%
!! GACATGCATTGATTCGTTGG+GGG + Chr4:32600762-32600781 MsG0480020038.01.T01:intron 45.0%
!! GATACGTATCAGGAAGTACC+GGG + Chr4:32599959-32599978 MsG0480020038.01.T01:intron 45.0%
!! GATGATTTTGGTGAGTGGCA+GGG + Chr4:32597361-32597380 MsG0480020038.01.T01:CDS 45.0%
!! GCACTGATGGTGCTCTTTTT+GGG - Chr4:32599711-32599730 None:intergenic 45.0%
!! GGTAGGCTTGTTTTCGGTTT+TGG - Chr4:32598684-32598703 None:intergenic 45.0%
!! GTTTTGGATCCAAGGGAACA+TGG + Chr4:32598908-32598927 MsG0480020038.01.T01:CDS 45.0%
!! GTTTTTGGAAGGGTGGTTTG+AGG + Chr4:32597559-32597578 MsG0480020038.01.T01:intron 45.0%
!!! AGCACTGATGGTGCTCTTTT+TGG - Chr4:32599712-32599731 None:intergenic 45.0%
!!! GGCAGTAGTTTTGGATCCAA+GGG + Chr4:32598901-32598920 MsG0480020038.01.T01:CDS 45.0%
!!! TGGCAGTAGTTTTGGATCCA+AGG + Chr4:32598900-32598919 MsG0480020038.01.T01:CDS 45.0%
!! AAGTATAAAAAAAAAAAAAT+TGG - Chr4:32597829-32597848 None:intergenic 5.0%
!! TAAATAATATATATAGAAAA+TGG - Chr4:32600431-32600450 None:intergenic 5.0%
!!! AAATGAATTTTATTTTATTA+CGG + Chr4:32597688-32597707 MsG0480020038.01.T01:intron 5.0%
!!! TAAAGTAAAAATTTAATTTA+TGG - Chr4:32600145-32600164 None:intergenic 5.0%
!!! TTTAACTTATATATTAATAT+GGG + Chr4:32598093-32598112 MsG0480020038.01.T01:intron 5.0%
AACATTCCTGAGTTCCTCCC+TGG + Chr4:32602340-32602359 MsG0480020038.01.T01:CDS 50.0%
AAGCTCCTTGTTAAGCCGGA+GGG - Chr4:32601359-32601378 None:intergenic 50.0%
AAGTGGCCAAAAGGCCAAGA+AGG - Chr4:32602803-32602822 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + Chr4:32597922-32597941 MsG0480020038.01.T01:intron 50.0%
CAATGACCATTGACCAGGCA+AGG - Chr4:32598427-32598446 None:intergenic 50.0%
CACCACCGAAAGGGAAAACT+CGG - Chr4:32599407-32599426 None:intergenic 50.0%
CCACTCACCAAAATCATCCC+AGG - Chr4:32597359-32597378 None:intergenic 50.0%
CGCTCAACTGTACCTATGCA+CGG + Chr4:32598288-32598307 MsG0480020038.01.T01:intron 50.0%
CTTGCCTGGTCAATGGTCAT+TGG + Chr4:32598425-32598444 MsG0480020038.01.T01:intron 50.0%
GACCTGTACGAGTGTCAAGT+TGG - Chr4:32601136-32601155 None:intergenic 50.0%
GCAACGTTGCAACCAACTTC+TGG - Chr4:32597435-32597454 None:intergenic 50.0%
GCCGAATGCGCAAATGCAAA+TGG + Chr4:32602502-32602521 MsG0480020038.01.T01:CDS 50.0%
GCTCAACTGTACCTATGCAC+GGG + Chr4:32598289-32598308 MsG0480020038.01.T01:intron 50.0%
GGGAGGAACTCAGGAATGTT+TGG - Chr4:32602340-32602359 None:intergenic 50.0%
TAAGCTCCTTGTTAAGCCGG+AGG - Chr4:32601360-32601379 None:intergenic 50.0%
TGGCTAATACCATCGAGGAG+AGG + Chr4:32597503-32597522 MsG0480020038.01.T01:CDS 50.0%
! AACCGAGTTTTCCCTTTCGG+TGG + Chr4:32599402-32599421 MsG0480020038.01.T01:intron 50.0%
! ACTGCACCGATACGTCGATA+CGG + Chr4:32599484-32599503 MsG0480020038.01.T01:intron 50.0%
! ATCATGCACCGATACCTTCC+CGG - Chr4:32599980-32599999 None:intergenic 50.0%
! ATGGTGTTGGAGGACTATGG+AGG + Chr4:32598635-32598654 MsG0480020038.01.T01:CDS 50.0%
!! AGGAAGTACCGGGAAGGTAT+CGG + Chr4:32599969-32599988 MsG0480020038.01.T01:intron 50.0%
!! ATGCATTGATTCGTTGGGGG+TGG + Chr4:32600765-32600784 MsG0480020038.01.T01:intron 50.0%
!! CCAAGAAGGAAGTGTTCTCC+GGG - Chr4:32602789-32602808 None:intergenic 50.0%
!! CCTGGGATGATTTTGGTGAG+TGG + Chr4:32597356-32597375 MsG0480020038.01.T01:CDS 50.0%
!! GAAGCTGATGATGGTGTTGG+AGG + Chr4:32598625-32598644 MsG0480020038.01.T01:CDS 50.0%
!! GCCAAGAAGGAAGTGTTCTC+CGG - Chr4:32602790-32602809 None:intergenic 50.0%
!! GGATGATTTTGGTGAGTGGC+AGG + Chr4:32597360-32597379 MsG0480020038.01.T01:CDS 50.0%
!!! TGGGTGTGTTTTTGGAAGGG+TGG + Chr4:32597552-32597571 MsG0480020038.01.T01:intron 50.0%
CCAACTGAGCTAAGCTCACG+GGG + Chr4:32597923-32597942 MsG0480020038.01.T01:intron 55.0%
CCCGGAGAACACTTCCTTCT+TGG + Chr4:32602786-32602805 MsG0480020038.01.T01:CDS 55.0%
CCTGAGTTCCTCCCTGGAAA+AGG + Chr4:32602346-32602365 MsG0480020038.01.T01:CDS 55.0%
CTATTGGAGCCTCTCCTCGA+TGG - Chr4:32597515-32597534 None:intergenic 55.0%
GATTTGGACAGGGCATGGTG+TGG + Chr4:32597792-32597811 MsG0480020038.01.T01:intron 55.0%
GCTTACCCTCCGGCTTAACA+AGG + Chr4:32601351-32601370 MsG0480020038.01.T01:intron 55.0%
TGGCAGGGCTTCTTGTCGAA+AGG + Chr4:32597376-32597395 MsG0480020038.01.T01:CDS 55.0%
TTGCACTCTTAGGCCCCGTT+TGG - Chr4:32602028-32602047 None:intergenic 55.0%
! CACAGGGACGGATTTGGACA+GGG + Chr4:32597782-32597801 MsG0480020038.01.T01:intron 55.0%
! CCTTTTCCAGGGAGGAACTC+AGG - Chr4:32602349-32602368 None:intergenic 55.0%
! TCACAGGGACGGATTTGGAC+AGG + Chr4:32597781-32597800 MsG0480020038.01.T01:intron 55.0%
!! CGTATCAGGAAGTACCGGGA+AGG + Chr4:32599963-32599982 MsG0480020038.01.T01:intron 55.0%
ATCCGCCCTTGCCTGGTCAA+TGG + Chr4:32598418-32598437 MsG0480020038.01.T01:intron 60.0%
ATGGGGGGACACCACCGAAA+GGG - Chr4:32599416-32599435 None:intergenic 60.0%
CCAAATCCGTCCCTGTGACC+AGG - Chr4:32597779-32597798 None:intergenic 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - Chr4:32597926-32597945 None:intergenic 60.0%
GACCATTGACCAGGCAAGGG+CGG - Chr4:32598423-32598442 None:intergenic 60.0%
GGGTGTGCACCTGCACATCT+TGG - Chr4:32601028-32601047 None:intergenic 60.0%
TATGGGGGGACACCACCGAA+AGG - Chr4:32599417-32599436 None:intergenic 60.0%
TGCACACCCTCAATCCCAGC+TGG + Chr4:32601039-32601058 MsG0480020038.01.T01:intron 60.0%
! CCTGGTCACAGGGACGGATT+TGG + Chr4:32597776-32597795 MsG0480020038.01.T01:intron 60.0%
! CTTCTGGGCCTTTTCCAGGG+AGG - Chr4:32602357-32602376 None:intergenic 60.0%
! GGACGGATTTGGACAGGGCA+TGG + Chr4:32597787-32597806 MsG0480020038.01.T01:intron 60.0%
!! TTCAGGTTGGGCGCAAAGCC+AGG - Chr4:32601072-32601091 None:intergenic 60.0%
AGCGGAGCCAGCTGGGATTG+AGG - Chr4:32601049-32601068 None:intergenic 65.0%
AGTCCAGATCCGCCCTTGCC+TGG + Chr4:32598411-32598430 MsG0480020038.01.T01:intron 65.0%
GCGGAGCCAGCTGGGATTGA+GGG - Chr4:32601048-32601067 None:intergenic 65.0%
GTTGGGCGCAAAGCCAGGAG+CGG - Chr4:32601067-32601086 None:intergenic 65.0%
TGACCAGGCAAGGGCGGATC+TGG - Chr4:32598417-32598436 None:intergenic 65.0%
AAGCCAGGAGCGGAGCCAGC+TGG - Chr4:32601057-32601076 None:intergenic 70.0%
AGCCAGGAGCGGAGCCAGCT+GGG - Chr4:32601056-32601075 None:intergenic 70.0%
! ATCCCAGCTGGCTCCGCTCC+TGG + Chr4:32601051-32601070 MsG0480020038.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 32597112 32603365 32597112 ID=MsG0480020038.01;Name=MsG0480020038.01
Chr4 mRNA 32597112 32603365 32597112 ID=MsG0480020038.01.T01;Parent=MsG0480020038.01;Name=MsG0480020038.01.T01;_AED=0.50;_eAED=0.56;_QI=0|0.75|0.4|1|1|1|5|0|564
Chr4 exon 32597112 32597533 32597112 ID=MsG0480020038.01.T01:exon:43155;Parent=MsG0480020038.01.T01
Chr4 exon 32598498 32598969 32598498 ID=MsG0480020038.01.T01:exon:43154;Parent=MsG0480020038.01.T01
Chr4 exon 32602286 32602523 32602286 ID=MsG0480020038.01.T01:exon:43153;Parent=MsG0480020038.01.T01
Chr4 exon 32602661 32602836 32602661 ID=MsG0480020038.01.T01:exon:43152;Parent=MsG0480020038.01.T01
Chr4 exon 32602979 32603365 32602979 ID=MsG0480020038.01.T01:exon:43151;Parent=MsG0480020038.01.T01
Chr4 CDS 32597112 32597533 32597112 ID=MsG0480020038.01.T01:cds;Parent=MsG0480020038.01.T01
Chr4 CDS 32598498 32598969 32598498 ID=MsG0480020038.01.T01:cds;Parent=MsG0480020038.01.T01
Chr4 CDS 32602286 32602523 32602286 ID=MsG0480020038.01.T01:cds;Parent=MsG0480020038.01.T01
Chr4 CDS 32602661 32602836 32602661 ID=MsG0480020038.01.T01:cds;Parent=MsG0480020038.01.T01
Chr4 CDS 32602979 32603365 32602979 ID=MsG0480020038.01.T01:cds;Parent=MsG0480020038.01.T01
Gene Sequence

>MsG0480020038.01.T01

ATGGCTATGCTCTCCAACAGACTTCAGTATCTAGCCAAGAAGAATAGGAAGTTTCTGAACAGAAGGAGTAATATCAGAAGCTCAAAGAGAGAAGATCAGAAGGGTTGCTTCAACTGTAAGAAACTTGGACATTTCATTGATGATTGTCTTGATCTCCAAAAGGATAAGTCAAAGGACAAGTCAAAGAAGTCATCTTTCAAACCAAGCAAATTCAAGAAGCAGATTAAGCAGAGTTTAATGGCAACCTGGGATGATTTTGGTGAGTGGCAGGGCTTCTTGTCGAAAGGCATCAAACTTTACGTGAAAAGCAAAAACATCAGCCAGAAGTTGGTTGCAACGTTGCGTCTGTTCTTCAAGTTGGGCCTGACTAGTTTTCTTTTATTGAAAGCTTTGGCTAATACCATCGAGGAGAGGCTCCAATATGCATCAGAGCAAAGAATAACCAGCAATTTACAAAATGGAAAAAGAGTTGCAATTGTTGGTGCAGGAATCAGTGGCCTACTTGCTTGCAAATATGCTCTACAGATTGGTTTTAATCCTGTTGTATATGAAGCTGATGATGGTGTTGGAGGACTATGGAGGCATACTATTGAATCTACTAAACTCCAAAACCGAAAACAAGCCTACCAATTTTCAGATTTTCCATGGGATTCTTCTGTAAAAGAAGTTTGTCCAAGTAATAAGCAAGTTGTAGATTATGTTGAATCATATGCTCAACATTTTTCCATCATTCCTTACATAAGATTCAATTCCAAAGTCATTGATATAGATTATGTTGGAGAGTCTGATGAAGATATGAAGTCATGGGAATTATGGAGTGGTAATGGCAGTAGTTTTGGATCCAAGGGAACATGGCATATTACAGTGGAAGATACCAAGAATTTCTCAACAAAGGTACATAAAGCAGAGTTTGTTATTCTTTGCATTGGGAAATATAGTGGTTTTCCAAACATTCCTGAGTTCCTCCCTGGAAAAGGCCCAGAAGTTTTTACAGGTAAGTTTATGCATTCTATGGATTACTCTGCCTTGGACAAAGAAACTGCTGCTAAATTGATAAAAAATAAGAGAGTTACAGTAGTAGGCTCAGGAAAATCTGCTCTTGATATAGCTGCCGAATGCGCAAATGCAAATGGAATCACTCACCCTTGCACGATTATAAATAGAACTTCACACTGGTTTCTCCCAGATTTCAACATTCTGGGCATTCGTCTCGGATACTTGTATTTCAATCGTTTCGCAGAACTTTTAGTTCACAAGCCCGGAGAACACTTCCTTCTTGGCCTTTTGGCCACTTTACTTTCACCATTGAGATGGGGAATTTCTAAACTTGTTGAAACATATCTGAAATGGAAGTTGCCACTGAAGAAGTATGGACTAGTACCTAATCATAGTTTTCTTCAAGAAATATCTGCATGTCAAATTGGAATTCTCCCTGATTCCTTTTTTGACAAAGTAAAAGAAGGATCCATCGAGATAAAGAAATCACAAAGCTTTAGCTTCTGCAAAGAAGGTTTGATCATCAATGAAGAAGCTAAGCCCTTAGAAACAGATGTAGTTATTCTTGCCACAGGATATAAAGGTGACCAAAAACTTAAAAGCATATTCAAATCTCCAATATTCCAAAATTACATTGACAGTTCAAGGATTTCTCTCTATAGGTCAGTAACAGTAACATTTGATACTTTTTTCTTTTAA
Protein sequence

>MsG0480020038.01.T01

MAMLSNRLQYLAKKNRKFLNRRSNIRSSKREDQKGCFNCKKLGHFIDDCLDLQKDKSKDKSKKSSFKPSKFKKQIKQSLMATWDDFGEWQGFLSKGIKLYVKSKNISQKLVATLRLFFKLGLTSFLLLKALANTIEERLQYASEQRITSNLQNGKRVAIVGAGISGLLACKYALQIGFNPVVYEADDGVGGLWRHTIESTKLQNRKQAYQFSDFPWDSSVKEVCPSNKQVVDYVESYAQHFSIIPYIRFNSKVIDIDYVGESDEDMKSWELWSGNGSSFGSKGTWHITVEDTKNFSTKVHKAEFVILCIGKYSGFPNIPEFLPGKGPEVFTGKFMHSMDYSALDKETAAKLIKNKRVTVVGSGKSALDIAAECANANGITHPCTIINRTSHWFLPDFNILGIRLGYLYFNRFAELLVHKPGEHFLLGLLATLLSPLRWGISKLVETYLKWKLPLKKYGLVPNHSFLQEISACQIGILPDSFFDKVKEGSIEIKKSQSFSFCKEGLIINEEAKPLETDVVILATGYKGDQKLKSIFKSPIFQNYIDSSRISLYRSVTVTFDTFFF*