AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008994.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008994.01.T01 MTR_2g450310 75.000 220 48 4 5 220 38 254 2.59e-110 329
MsG0280008994.01.T01 MTR_2g450310 91.026 78 7 0 206 283 402 479 9.69e-45 159
MsG0280008994.01.T01 MTR_2g450510 69.082 207 58 3 5 207 38 242 2.22e-95 292
MsG0280008994.01.T01 MTR_2g450510 73.134 134 30 2 188 321 391 518 7.20e-65 213
MsG0280008994.01.T01 MTR_1372s0010 82.278 79 14 0 112 190 1 79 2.67e-44 146
MsG0280008994.01.T01 MTR_1088s0010 65.179 112 33 3 5 112 38 147 1.75e-42 144
MsG0280008994.01.T01 MTR_6g037690 58.333 108 44 1 208 315 206 312 2.38e-41 146
MsG0280008994.01.T01 MTR_2g020630 31.273 275 178 6 5 270 45 317 9.74e-35 132
MsG0280008994.01.T01 MTR_2g020630 40.741 108 63 1 208 315 399 505 2.77e-19 88.6
MsG0280008994.01.T01 MTR_2g043850 37.383 214 126 5 5 212 45 256 1.24e-33 129
MsG0280008994.01.T01 MTR_2g043850 40.741 108 63 1 208 315 413 519 3.34e-20 91.3
MsG0280008994.01.T01 MTR_4g124800 32.971 276 173 8 5 270 47 320 4.14e-33 128
MsG0280008994.01.T01 MTR_4g124800 38.889 108 64 2 208 315 416 521 2.35e-15 77.0
MsG0280008994.01.T01 MTR_2g044140 36.449 214 128 5 5 212 45 256 1.81e-32 126
MsG0280008994.01.T01 MTR_2g044140 38.889 108 65 1 208 315 413 519 3.55e-18 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008994.01.T01 AT1G19250 38.426 216 115 7 5 209 44 252 2.19e-37 140
MsG0280008994.01.T01 AT1G19250 40.741 108 63 1 208 315 412 518 2.82e-19 88.6
MsG0280008994.01.T01 AT5G45180 38.710 217 111 9 5 209 44 250 9.24e-36 134
MsG0280008994.01.T01 AT5G45180 38.202 89 54 1 208 296 372 459 5.08e-12 66.6

Find 86 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCTATCATTGCCAATTT+TGG 0.050890 2:+43023334 None:intergenic
TAGTCTTATTATTTACAAAA+TGG 0.231432 2:-43027622 MsG0280008994.01.T01:five_prime_UTR
CTGAAATGGTATGCTTGTTT+TGG 0.255906 2:+43027450 None:intergenic
TGGAGAAGGATGTTAAATTA+TGG 0.260934 2:-43023213 MsG0280008994.01.T01:CDS
AGGTAAGGTTATGCATTCTA+TGG 0.272924 2:-43024703 MsG0280008994.01.T01:CDS
ACATCCTCGCATCCCAAAAT+TGG 0.284230 2:-43023347 MsG0280008994.01.T01:CDS
TCAGCAGAATACATGGTAAT+TGG 0.303318 2:-43022953 MsG0280008994.01.T01:three_prime_UTR
TACCTTTGTTGAGAAATTCT+TGG 0.304695 2:+43027193 None:intergenic
GTCAAGATAGCTTTATCCTT+TGG 0.312380 2:-43022884 MsG0280008994.01.T01:three_prime_UTR
AGTGGTAATGGCAGTAGTTT+TGG 0.313462 2:-43027251 MsG0280008994.01.T01:CDS
ATATGAAGTCATGGGAATTA+TGG 0.316758 2:-43027274 MsG0280008994.01.T01:CDS
TTAGTTTATTGACTCGTCTA+TGG 0.318799 2:-43022752 MsG0280008994.01.T01:three_prime_UTR
TTTGTTTATGTTATAACATA+TGG 0.320348 2:-43022722 MsG0280008994.01.T01:three_prime_UTR
GCGGAGCTATTTGAACCATA+TGG 0.339270 2:-43023061 MsG0280008994.01.T01:CDS
ACCATTTGCATTTGCGCATT+CGG 0.341818 2:+43024584 None:intergenic
TGAATCTTAGTAAGGAATAA+TGG 0.360941 2:+43027341 None:intergenic
CTTTGCATTGGGAAATATAG+TGG 0.362241 2:-43024777 MsG0280008994.01.T01:CDS
GAAACCAGCGCGCAGTTCTA+TGG 0.366149 2:+43024435 None:intergenic
AATAAGAGAGTTACAGTAGT+AGG 0.371604 2:-43024636 MsG0280008994.01.T01:CDS
GGGAGGAACTCTGGAATGTT+TGG 0.377591 2:+43024750 None:intergenic
TAGCACACCTCTAAACAAAA+AGG 0.384966 2:+43022993 None:intergenic
GGAGAAGGATGTTAAATTAT+GGG 0.394999 2:-43023212 MsG0280008994.01.T01:CDS
TAAATAATAAGACTAATTGC+TGG 0.407752 2:+43027630 None:intergenic
TTCTATGGATTACTCTTCCT+TGG 0.411045 2:-43024688 MsG0280008994.01.T01:CDS
TCTAGAACTTGCTTATTACT+TGG 0.420077 2:+43027392 None:intergenic
CGGAGCTATTTGAACCATAT+GGG 0.422701 2:-43023060 MsG0280008994.01.T01:CDS
ATAATCTATATCAATGACTT+TGG 0.427553 2:+43027316 None:intergenic
TTGCAAATATGTTCTACAAA+TGG 0.431354 2:-43027553 MsG0280008994.01.T01:five_prime_UTR
TTATAATCAGTGGGCCCATA+TGG 0.433595 2:+43023046 None:intergenic
ATATGGCTGATGATGGTGTT+TGG 0.433993 2:-43027515 MsG0280008994.01.T01:exon
GCATTGTTACTTGTGGCATA+TGG 0.438868 2:-43023144 MsG0280008994.01.T01:CDS
CTTTGGAATGAATCTTAGTA+AGG 0.440478 2:+43027333 None:intergenic
AGTTTGTTATTCTTTGCATT+GGG 0.451815 2:-43024788 MsG0280008994.01.T01:CDS
TGTAATATGCCATGTTCCCT+TGG 0.457974 2:+43027226 None:intergenic
GAGTTTGTTATTCTTTGCAT+TGG 0.462117 2:-43024789 MsG0280008994.01.T01:CDS
GACGAGTCAATAAACTAAGA+AGG 0.469643 2:+43022757 None:intergenic
ATCCCATGGAAAATCTGAAA+TGG 0.474607 2:+43027436 None:intergenic
CCAGAGTTCCTCCCTGGAAA+AGG 0.479687 2:-43024741 MsG0280008994.01.T01:CDS
TATGGGCCCACTGATTATAA+TGG 0.482729 2:-43023043 MsG0280008994.01.T01:CDS
AAAGTTTGCTATAAATGAAA+AGG 0.487165 2:+43022787 None:intergenic
AGGGTTGCAATTGTTGGTGC+AGG 0.491948 2:-43027594 MsG0280008994.01.T01:five_prime_UTR
CATCATCAGCCATATACAAC+AGG 0.493602 2:+43027523 None:intergenic
AACATTCCAGAGTTCCTCCC+TGG 0.496220 2:-43024747 MsG0280008994.01.T01:CDS
GTCATTGATATAGATTATGT+TGG 0.502491 2:-43027311 MsG0280008994.01.T01:CDS
AACAAGACCATTATAATCAG+TGG 0.502752 2:+43023036 None:intergenic
ATCCCAAAATTGGCAATGAT+AGG 0.503683 2:-43023337 MsG0280008994.01.T01:CDS
AGAGTTACAGTAGTAGGCTC+AGG 0.504894 2:-43024630 MsG0280008994.01.T01:CDS
AAAAGACCCTTCTTTCTCCT+CGG 0.506769 2:+43023085 None:intergenic
CTAGAAAATGTGCTAACCAT+TGG 0.509768 2:+43023269 None:intergenic
ATGGTAATTGGAGGGGTGCA+TGG 0.512734 2:-43022941 MsG0280008994.01.T01:three_prime_UTR
TGGGAATTATGGAGTGGTAA+TGG 0.517223 2:-43027263 MsG0280008994.01.T01:CDS
GCCGAATGCGCAAATGCAAA+TGG 0.517814 2:-43024585 MsG0280008994.01.T01:intron
TATGTTATAACATAAACAAA+AGG 0.522704 2:+43022725 None:intergenic
CTGATGAAGATATGAAGTCA+TGG 0.535713 2:-43027283 MsG0280008994.01.T01:CDS
AGCAGCAGTTTCTTTGTCCA+AGG 0.539073 2:+43024671 None:intergenic
TCTCACTTCAGCAGAATACA+TGG 0.541686 2:-43022960 MsG0280008994.01.T01:three_prime_UTR
TGATGTACTCAGATAGATGC+AGG 0.544025 2:+43027700 None:intergenic
GCAGAATACATGGTAATTGG+AGG 0.551730 2:-43022950 MsG0280008994.01.T01:three_prime_UTR
GTGTAATCCGAGGAGAAAGA+AGG 0.551929 2:-43023092 MsG0280008994.01.T01:CDS
ATTGCCTAGTATAAAAGTGA+TGG 0.568840 2:-43023233 MsG0280008994.01.T01:CDS
CAGAATACATGGTAATTGGA+GGG 0.572921 2:-43022949 MsG0280008994.01.T01:three_prime_UTR
TACCAAGAATTTCTCAACAA+AGG 0.578314 2:-43027195 MsG0280008994.01.T01:intron
ACGAGTCAATAAACTAAGAA+GGG 0.580449 2:+43022758 None:intergenic
TGGCTGATGATGGTGTTTGG+AGG 0.584168 2:-43027512 MsG0280008994.01.T01:exon
CTGTTGTATATGGCTGATGA+TGG 0.587982 2:-43027522 MsG0280008994.01.T01:exon
GAACATATTTGCAAGCAAGT+AGG 0.588368 2:+43027562 None:intergenic
TGATGAAGATATGAAGTCAT+GGG 0.593792 2:-43027282 MsG0280008994.01.T01:CDS
GGCAATGATAGGATATGCTG+AGG 0.603017 2:-43023326 MsG0280008994.01.T01:CDS
AGATCATGCATTGTTACTTG+TGG 0.603581 2:-43023151 MsG0280008994.01.T01:CDS
AGAATACATGGTAATTGGAG+GGG 0.618236 2:-43022948 MsG0280008994.01.T01:three_prime_UTR
TAGTATAAAAGTGATGGAGA+AGG 0.619337 2:-43023227 MsG0280008994.01.T01:CDS
GTTCTATGGATAATCGTGCA+AGG 0.619433 2:+43024449 None:intergenic
AATAATGACAAATAAACCAA+AGG 0.621111 2:+43022868 None:intergenic
TTCTATGGATAATCGTGCAA+GGG 0.621581 2:+43024450 None:intergenic
ATTGTTGGTGCAGGAATCAG+TGG 0.624826 2:-43027585 MsG0280008994.01.T01:five_prime_UTR
TTATCCATAGAACTGCGCGC+TGG 0.626391 2:-43024439 MsG0280008994.01.T01:intron
ACAAGACCATTATAATCAGT+GGG 0.632491 2:+43023037 None:intergenic
TGTAATCCGAGGAGAAAGAA+GGG 0.645189 2:-43023091 MsG0280008994.01.T01:CDS
GAGACATGAAGTGTAATCCG+AGG 0.647245 2:-43023102 MsG0280008994.01.T01:CDS
TAGAGAAAGCACAACACTAG+TGG 0.649415 2:-43022911 MsG0280008994.01.T01:three_prime_UTR
TGATGGTGTTTGGAGGACTG+TGG 0.659063 2:-43027505 MsG0280008994.01.T01:CDS
CTAATGAAATGAGATGCCAA+TGG 0.660576 2:-43023285 MsG0280008994.01.T01:CDS
AAGTCATGGGAATTATGGAG+TGG 0.671476 2:-43027269 MsG0280008994.01.T01:CDS
GGGAACATGGCATATTACAG+TGG 0.699925 2:-43027222 MsG0280008994.01.T01:CDS
GCAATGATAGGATATGCTGA+GGG 0.702690 2:-43023325 MsG0280008994.01.T01:CDS
TGGTGTTTGGAGGACTGTGG+AGG 0.724754 2:-43027502 MsG0280008994.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACCAAAAATTAATATATT+CGG + Chr2:43025048-43025067 None:intergenic 10.0%
!!! AAAATCTAAAATAAACATAA+GGG - Chr2:43025435-43025454 MsG0280008994.01.T01:intron 10.0%
!!! ATATTAAAATTGTGTTTTTA+TGG - Chr2:43023588-43023607 MsG0280008994.01.T01:intron 10.0%
!!! TAAAATCTAAAATAAACATA+AGG - Chr2:43025434-43025453 MsG0280008994.01.T01:intron 10.0%
!!! TTAAAACTTTTAAAACATAA+CGG + Chr2:43025115-43025134 None:intergenic 10.0%
!!! TTCTCAATTTTTTTATAATA+AGG - Chr2:43024137-43024156 MsG0280008994.01.T01:intron 10.0%
!!! TTTGTATCAAATTTTTAAAT+TGG - Chr2:43023800-43023819 MsG0280008994.01.T01:intron 10.0%
!! AAAAAAAATTTCAGGATAAT+TGG + Chr2:43023642-43023661 None:intergenic 15.0%
!! AAAAAAATTTCAGGATAATT+GGG + Chr2:43023641-43023660 None:intergenic 15.0%
!! AATTGAGAAAATTATCAAAT+TGG + Chr2:43024126-43024145 None:intergenic 15.0%
!! GAAAATTGTACATTTAATAT+AGG + Chr2:43024356-43024375 None:intergenic 15.0%
!! TATGTTATAACATAAACAAA+AGG + Chr2:43027722-43027741 None:intergenic 15.0%
!! TATTTACAAAATGGAAAAAA+GGG - Chr2:43022831-43022850 MsG0280008994.01.T01:three_prime_UTR 15.0%
!! TCTTACAAAAACAAATAAAT+TGG + Chr2:43026206-43026225 None:intergenic 15.0%
!! TTAAAACCTAAAATACATAA+CGG + Chr2:43025086-43025105 None:intergenic 15.0%
!! TTATTTACAAAATGGAAAAA+AGG - Chr2:43022830-43022849 MsG0280008994.01.T01:three_prime_UTR 15.0%
!! TTTATATCAAATTCTCAAAT+TGG + Chr2:43024096-43024115 None:intergenic 15.0%
!! TTTGTTTATGTTATAACATA+TGG - Chr2:43027722-43027741 MsG0280008994.01.T01:five_prime_UTR 15.0%
!!! AATATTCCAGAAAATTTTAT+TGG - Chr2:43027270-43027289 MsG0280008994.01.T01:CDS 15.0%
!!! ATGTTTTAAAAGTTTTAAGT+TGG - Chr2:43025117-43025136 MsG0280008994.01.T01:intron 15.0%
!!! ATTGCTTTAAAAAAAATTTC+AGG + Chr2:43023650-43023669 None:intergenic 15.0%
!!! GTTTATTTTAGATTTTAAGT+TGG + Chr2:43025431-43025450 None:intergenic 15.0%
!!! TAGTCTTATTATTTACAAAA+TGG - Chr2:43022822-43022841 MsG0280008994.01.T01:three_prime_UTR 15.0%
!!! TATGTTTTATATGTATTTGT+AGG + Chr2:43026682-43026701 None:intergenic 15.0%
!!! TTAAAAACTTTAAAACGTAA+GGG + Chr2:43025144-43025163 None:intergenic 15.0%
!!! TTCATATTTCATTTTCTTTT+TGG - Chr2:43023316-43023335 MsG0280008994.01.T01:CDS 15.0%
!!! TTGAAACTTTTAAAACATAA+GGG - Chr2:43025375-43025394 MsG0280008994.01.T01:intron 15.0%
!! AAATATGTAAACCACTAAAT+TGG + Chr2:43027006-43027025 None:intergenic 20.0%
!! AAATTCTCTATACTAATCTA+TGG - Chr2:43027052-43027071 MsG0280008994.01.T01:intron 20.0%
!! AATAATGACAAATAAACCAA+AGG + Chr2:43027579-43027598 None:intergenic 20.0%
!! ACTCTATTAATAACTCAAAA+TGG + Chr2:43023848-43023829 None:intergenic 20.0%
!! AGAAACATTAGAGATAAATA+AGG - Chr2:43023396-43023415 MsG0280008994.01.T01:intron 20.0%
!! ATAATCTATATCAATGACTT+TGG + Chr2:43023131-43023150 None:intergenic 20.0%
!! GAAACATTAGAGATAAATAA+GGG - Chr2:43023397-43023416 MsG0280008994.01.T01:intron 20.0%
!! TAAATAATAAGACTAATTGC+TGG + Chr2:43022817-43022836 None:intergenic 20.0%
!! TACAAAACATCTAATAGAAT+CGG + Chr2:43023890-43023909 None:intergenic 20.0%
!! TGTAACAAAAACATAGATAA+AGG + Chr2:43026887-43026906 None:intergenic 20.0%
!! TTGAAATATTAATAGAGTCA+AGG + Chr2:43026821-43026840 None:intergenic 20.0%
!! TTTCATAATTACAAATGTGT+TGG - Chr2:43023343-43023362 MsG0280008994.01.T01:CDS 20.0%
!!! AAAGTTTGCTATAAATGAAA+AGG + Chr2:43027660-43027679 None:intergenic 20.0%
!!! AATTTAAGATTAGCTTACAA+AGG + Chr2:43026795-43026814 None:intergenic 20.0%
!!! ATGTATTTTAGGTTTTAAGT+TGG - Chr2:43025088-43025107 MsG0280008994.01.T01:intron 20.0%
!!! ATGTTTTAAAAGTTTCAAGT+TGG + Chr2:43025373-43025392 None:intergenic 20.0%
!!! ATTTTATGGTATCACTATAA+CGG + Chr2:43024184-43024203 None:intergenic 20.0%
!!! CAATTTCACAATTTTAACAA+AGG - Chr2:43023563-43023582 MsG0280008994.01.T01:intron 20.0%
!!! CTCTAGTAAAACTATATTTT+GGG + Chr2:43023470-43023489 None:intergenic 20.0%
!!! CTTAAAAACTTTAAAACGTA+AGG + Chr2:43025145-43025164 None:intergenic 20.0%
!!! CTTGAAACTTTTAAAACATA+AGG - Chr2:43025374-43025393 MsG0280008994.01.T01:intron 20.0%
!!! TAACCAAAAATTGACTTTTT+AGG - Chr2:43024643-43024662 MsG0280008994.01.T01:CDS 20.0%
!!! TAAGCAAAAATTCACTTTTT+AGG + Chr2:43024731-43024750 None:intergenic 20.0%
!!! TCTCTAGTAAAACTATATTT+TGG + Chr2:43023471-43023490 None:intergenic 20.0%
!!! TGAATATGCTTTTAAGTTTT+TGG + Chr2:43026550-43026569 None:intergenic 20.0%
!!! TTCTTTTACTTTGTCAAAAA+AGG + Chr2:43026406-43026425 None:intergenic 20.0%
!!! TTTTTTGACAAAGTAAAAGA+AGG - Chr2:43026405-43026424 MsG0280008994.01.T01:intron 20.0%
!!! TTTTTTTTAGATAGAAGAGA+TGG - Chr2:43024400-43024419 MsG0280008994.01.T01:intron 20.0%
! AAAAATTAATATATTCGGCG+GGG + Chr2:43025043-43025062 None:intergenic 25.0%
! AAAATTACATTGACAGTTCA+AGG - Chr2:43026584-43026603 MsG0280008994.01.T01:intron 25.0%
! AAGAGTTTACAAGGATATAT+TGG + Chr2:43025493-43025512 None:intergenic 25.0%
! ACAAAACATCTAATAGAATC+GGG + Chr2:43023889-43023908 None:intergenic 25.0%
! AGAGATAAATAAGGGAAATA+TGG - Chr2:43023405-43023424 MsG0280008994.01.T01:intron 25.0%
! AGTTTCTAAATTTCTGTCTT+TGG - Chr2:43024437-43024456 MsG0280008994.01.T01:intron 25.0%
! ATAGTATTGTTGTAATGCAA+AGG + Chr2:43025595-43025614 None:intergenic 25.0%
! ATTATCAACAAATCACAATG+TGG + Chr2:43024567-43024586 None:intergenic 25.0%
! CAAAAATTAATATATTCGGC+GGG + Chr2:43025044-43025063 None:intergenic 25.0%
! CCAAAAATTAATATATTCGG+CGG + Chr2:43025045-43025064 None:intergenic 25.0%
! CCAAATCATACATAAGAAAT+AGG + Chr2:43026658-43026677 None:intergenic 25.0%
! GACTGAATATTTACAAAAAC+AGG - Chr2:43025621-43025640 MsG0280008994.01.T01:intron 25.0%
! GTCATTGATATAGATTATGT+TGG - Chr2:43023133-43023152 MsG0280008994.01.T01:CDS 25.0%
! GTGCTATACTATTAAGAAAA+GGG - Chr2:43024259-43024278 MsG0280008994.01.T01:intron 25.0%
! TAAAGATTAACATGCTATCA+TGG - Chr2:43025556-43025575 MsG0280008994.01.T01:intron 25.0%
! TAGTATTGTTGTAATGCAAA+GGG + Chr2:43025594-43025613 None:intergenic 25.0%
! TCTTGAAGAAAACTATGATT+AGG + Chr2:43026349-43026368 None:intergenic 25.0%
! TGAATCTTAGTAAGGAATAA+TGG + Chr2:43023106-43023125 None:intergenic 25.0%
! TGTGCTATACTATTAAGAAA+AGG - Chr2:43024258-43024277 MsG0280008994.01.T01:intron 25.0%
! TTAAACTCAATATCATGTTG+CGG + Chr2:43025210-43025229 None:intergenic 25.0%
! TTCTCAAATGTTTCTTAGAT+TGG - Chr2:43023861-43023880 MsG0280008994.01.T01:intron 25.0%
! TTGAGTTATTAATAGAGTCA+GGG - Chr2:43024069-43024088 MsG0280008994.01.T01:intron 25.0%
! TTGCAAATATGTTCTACAAA+TGG - Chr2:43022891-43022910 MsG0280008994.01.T01:three_prime_UTR 25.0%
! TTGTGATTTCTTTATCATGA+TGG + Chr2:43026433-43026452 None:intergenic 25.0%
!! AATGTCTTTTGGATCTTATT+TGG + Chr2:43023931-43023950 None:intergenic 25.0%
!! ATGTCTTAAAAGTTTCAAGT+TGG + Chr2:43025402-43025421 None:intergenic 25.0%
!! CCTATTTCTTATGTATGATT+TGG - Chr2:43026655-43026674 MsG0280008994.01.T01:intron 25.0%
!! GAACCTAAAAAGTCAATTTT+TGG + Chr2:43024649-43024668 None:intergenic 25.0%
!! GTCTTTTGGATATTATTTAG+TGG + Chr2:43023964-43023983 None:intergenic 25.0%
!! GTTAATGACATAATGTCTTT+TGG + Chr2:43023942-43023961 None:intergenic 25.0%
!! TAGTGGTTTACATATTTTCT+AGG - Chr2:43027009-43027028 MsG0280008994.01.T01:intron 25.0%
!! TCTAGAGTAAATCATCAAAT+TGG - Chr2:43023769-43023788 MsG0280008994.01.T01:intron 25.0%
!! TGATCTCCAATAAAATTTTC+TGG + Chr2:43027279-43027298 None:intergenic 25.0%
!! TGTGATATGCTTGATTTTAA+GGG + Chr2:43024988-43025007 None:intergenic 25.0%
!! TTGAACTGTCAATGTAATTT+TGG + Chr2:43026585-43026604 None:intergenic 25.0%
!! TTGTGATATGCTTGATTTTA+AGG + Chr2:43024989-43025008 None:intergenic 25.0%
!! TTTGAGTTATTAATAGAGTC+AGG - Chr2:43024068-43024087 MsG0280008994.01.T01:intron 25.0%
!! TTTGATCCGTTATGTATTTT+AGG - Chr2:43025077-43025096 MsG0280008994.01.T01:intron 25.0%
!!! AATAACTACATCTGTTTCTA+AGG + Chr2:43026504-43026523 None:intergenic 25.0%
!!! AGTTTGTTATTCTTTGCATT+GGG - Chr2:43025656-43025675 MsG0280008994.01.T01:intron 25.0%
!!! ATAACTACATCTGTTTCTAA+GGG + Chr2:43026503-43026522 None:intergenic 25.0%
!!! CAATTTATGTTTTAGTGACA+AGG + Chr2:43025519-43025538 None:intergenic 25.0%
!!! GTCAATGTAATTTTGGAATA+TGG + Chr2:43026578-43026597 None:intergenic 25.0%
!!! TTATGATCCTTTTTGTTTAG+AGG - Chr2:43027444-43027463 MsG0280008994.01.T01:CDS 25.0%
AACAAGACCATTATAATCAG+TGG + Chr2:43027411-43027430 None:intergenic 30.0%
AATAAGAGAGTTACAGTAGT+AGG - Chr2:43025808-43025827 MsG0280008994.01.T01:intron 30.0%
ACAAAACAACTAATAGAGTC+AGG - Chr2:43024007-43024026 MsG0280008994.01.T01:intron 30.0%
ACAAGACCATTATAATCAGT+GGG + Chr2:43027410-43027429 None:intergenic 30.0%
ACAAGGTTAAAGAGTTTACA+AGG + Chr2:43025502-43025521 None:intergenic 30.0%
ACGAGTCAATAAACTAAGAA+GGG + Chr2:43027689-43027708 None:intergenic 30.0%
ACTACAATGTATCTTACCAA+TGG + Chr2:43026157-43026176 None:intergenic 30.0%
ACTTGACCGATTAAAGATTT+GGG + Chr2:43025307-43025326 None:intergenic 30.0%
ACTTTGTCAAAAAAGGAATC+AGG + Chr2:43026399-43026418 None:intergenic 30.0%
AGAAACATTTGAGAAAGACA+TGG + Chr2:43023856-43023875 None:intergenic 30.0%
AGAAATATCTGCATGTCAAT+TGG - Chr2:43026366-43026385 MsG0280008994.01.T01:intron 30.0%
AGAACCAAATAAGTCTATCA+AGG + Chr2:43024783-43024802 None:intergenic 30.0%
AGACCACATACTTCATTTAT+TGG + Chr2:43024674-43024693 None:intergenic 30.0%
AGTACCTTGATAGACTTATT+TGG - Chr2:43024776-43024795 MsG0280008994.01.T01:CDS 30.0%
AGTGAAATAATTACTCCCTT+CGG - Chr2:43024611-43024630 MsG0280008994.01.T01:CDS 30.0%
ATAGGTGAGAATGAAACAAA+GGG - Chr2:43023733-43023752 MsG0280008994.01.T01:intron 30.0%
ATATGAAGTCATGGGAATTA+TGG - Chr2:43023170-43023189 MsG0280008994.01.T01:CDS 30.0%
ATTGCCTAGTATAAAAGTGA+TGG - Chr2:43027211-43027230 MsG0280008994.01.T01:CDS 30.0%
CAAAACAACTAATAGAGTCA+GGG - Chr2:43024008-43024027 MsG0280008994.01.T01:intron 30.0%
CAAAACATCTAATAGAATCG+GGG + Chr2:43023888-43023907 None:intergenic 30.0%
CAAATGACTTACACTTAACT+TGG + Chr2:43024236-43024255 None:intergenic 30.0%
CAAGTTAAGTGTAAGTCATT+TGG - Chr2:43024234-43024253 MsG0280008994.01.T01:intron 30.0%
CATCCAATAAATGAAGTATG+TGG - Chr2:43024668-43024687 MsG0280008994.01.T01:CDS 30.0%
CATTCAATAAACGATGTATG+TGG + Chr2:43024706-43024725 None:intergenic 30.0%
CTTGTTGAACATATCTGAAA+TGG - Chr2:43026293-43026312 MsG0280008994.01.T01:intron 30.0%
CTTTGTCAAAAAAGGAATCA+GGG + Chr2:43026398-43026417 None:intergenic 30.0%
GGAGAAGGATGTTAAATTAT+GGG - Chr2:43027232-43027251 MsG0280008994.01.T01:CDS 30.0%
TACCAAGAATTTCTCAACAA+AGG - Chr2:43023249-43023268 MsG0280008994.01.T01:CDS 30.0%
TACCTTTGTTGAGAAATTCT+TGG + Chr2:43023254-43023273 None:intergenic 30.0%
TATAATAGTGAGTTAGTGAC+CGG - Chr2:43024749-43024768 MsG0280008994.01.T01:CDS 30.0%
TCATCTGCCACATTAATTTA+TGG - Chr2:43024816-43024835 MsG0280008994.01.T01:intron 30.0%
TCGAGAGAAAAATCTTATTG+TGG + Chr2:43023541-43023560 None:intergenic 30.0%
TGATGAAGATATGAAGTCAT+GGG - Chr2:43023162-43023181 MsG0280008994.01.T01:CDS 30.0%
TGGAGAAGGATGTTAAATTA+TGG - Chr2:43027231-43027250 MsG0280008994.01.T01:CDS 30.0%
TGTCAACCCAAATCTTTAAT+CGG - Chr2:43025298-43025317 MsG0280008994.01.T01:intron 30.0%
TTAATTTATGGTCCAACGAT+TGG - Chr2:43024828-43024847 MsG0280008994.01.T01:intron 30.0%
TTTGTTTCATTCTCACCTAT+GGG + Chr2:43023733-43023752 None:intergenic 30.0%
! ACTCTAAATTTTCAGAGATG+GGG - Chr2:43026260-43026279 MsG0280008994.01.T01:intron 30.0%
! ATACCATTTCAGATTTTCCA+TGG - Chr2:43023005-43023024 MsG0280008994.01.T01:three_prime_UTR 30.0%
! ATCCTATCATTGCCAATTTT+GGG + Chr2:43027112-43027131 None:intergenic 30.0%
! CACTCTAAATTTTCAGAGAT+GGG - Chr2:43026259-43026278 MsG0280008994.01.T01:intron 30.0%
! CCGCCGAATATATTAATTTT+TGG - Chr2:43025042-43025061 MsG0280008994.01.T01:intron 30.0%
! CTCCTAGATTTCAACATTTT+GGG - Chr2:43026031-43026050 MsG0280008994.01.T01:intron 30.0%
! TACCATTTCAGATTTTCCAT+GGG - Chr2:43023006-43023025 MsG0280008994.01.T01:three_prime_UTR 30.0%
! TAGTATAAAAGTGATGGAGA+AGG - Chr2:43027217-43027236 MsG0280008994.01.T01:CDS 30.0%
! TATCCTATCATTGCCAATTT+TGG + Chr2:43027113-43027132 None:intergenic 30.0%
! TCTAGAACTTGCTTATTACT+TGG + Chr2:43023055-43023074 None:intergenic 30.0%
! TCTCCTAGATTTCAACATTT+TGG - Chr2:43026030-43026049 MsG0280008994.01.T01:intron 30.0%
!! CTTTGGAATGAATCTTAGTA+AGG + Chr2:43023114-43023133 None:intergenic 30.0%
!! GAGTTTGTTATTCTTTGCAT+TGG - Chr2:43025655-43025674 MsG0280008994.01.T01:intron 30.0%
!! GGTTTTAATCCTGTTGTATA+TGG - Chr2:43022912-43022931 MsG0280008994.01.T01:three_prime_UTR 30.0%
!! GTTTACATATTTTCTAGGAG+TGG - Chr2:43027014-43027033 MsG0280008994.01.T01:intron 30.0%
!! TGAAATGGTATGCTTGTTTT+GGG + Chr2:43022996-43023015 None:intergenic 30.0%
!! TTAGTTTATTGACTCGTCTA+TGG - Chr2:43027692-43027711 MsG0280008994.01.T01:five_prime_UTR 30.0%
!! TTCTCCATCACTTTTATACT+AGG + Chr2:43027218-43027237 None:intergenic 30.0%
AATCTATGGTAAACCACTAC+AGG - Chr2:43027066-43027085 MsG0280008994.01.T01:intron 35.0%
ACCTTACCTGTAAAAACTTC+TGG + Chr2:43025730-43025749 None:intergenic 35.0%
AGAATACATGGTAATTGGAG+GGG - Chr2:43027496-43027515 MsG0280008994.01.T01:CDS 35.0%
AGGTAAGGTTATGCATTCTA+TGG - Chr2:43025741-43025760 MsG0280008994.01.T01:intron 35.0%
ATCCCAAAATTGGCAATGAT+AGG - Chr2:43027107-43027126 MsG0280008994.01.T01:intron 35.0%
ATCCCATGGAAAATCTGAAA+TGG + Chr2:43023011-43023030 None:intergenic 35.0%
ATCTCTTACGTTATTCACGT+TGG - Chr2:43025168-43025187 MsG0280008994.01.T01:intron 35.0%
ATCTTTAATCGGTCAAGTGA+CGG - Chr2:43025309-43025328 MsG0280008994.01.T01:intron 35.0%
ATTCTTGCCACAGGATATAA+AGG - Chr2:43026521-43026540 MsG0280008994.01.T01:intron 35.0%
CACTTGACCGATTAAAGATT+TGG + Chr2:43025308-43025327 None:intergenic 35.0%
CAGAATACATGGTAATTGGA+GGG - Chr2:43027495-43027514 MsG0280008994.01.T01:CDS 35.0%
CATAGGTGAGAATGAAACAA+AGG - Chr2:43023732-43023751 MsG0280008994.01.T01:intron 35.0%
CCTTACCTGTAAAAACTTCT+GGG + Chr2:43025729-43025748 None:intergenic 35.0%
CGTTGGACCATAAATTAATG+TGG + Chr2:43024826-43024845 None:intergenic 35.0%
CTAATGAAATGAGATGCCAA+TGG - Chr2:43027159-43027178 MsG0280008994.01.T01:intron 35.0%
CTAGAAAATGTGCTAACCAT+TGG + Chr2:43027178-43027197 None:intergenic 35.0%
CTGATGAAGATATGAAGTCA+TGG - Chr2:43023161-43023180 MsG0280008994.01.T01:CDS 35.0%
CTTTGCATTGGGAAATATAG+TGG - Chr2:43025667-43025686 MsG0280008994.01.T01:intron 35.0%
GAAAAAAGGGTTGCAATTGT+TGG - Chr2:43022844-43022863 MsG0280008994.01.T01:three_prime_UTR 35.0%
GAACATATTTGCAAGCAAGT+AGG + Chr2:43022885-43022904 None:intergenic 35.0%
GACGAGTCAATAAACTAAGA+AGG + Chr2:43027690-43027709 None:intergenic 35.0%
GATGTATTATTTGCCTGTAG+TGG + Chr2:43027082-43027101 None:intergenic 35.0%
TACAGTAGTGACCAATTTAG+TGG - Chr2:43026992-43027011 MsG0280008994.01.T01:intron 35.0%
TAGCACACCTCTAAACAAAA+AGG + Chr2:43027454-43027473 None:intergenic 35.0%
TCAGCAGAATACATGGTAAT+TGG - Chr2:43027491-43027510 MsG0280008994.01.T01:CDS 35.0%
TCTTACCAATGGTGATAGTA+AGG + Chr2:43026146-43026165 None:intergenic 35.0%
TGCCCAAAATGTTGAAATCT+AGG + Chr2:43026036-43026055 None:intergenic 35.0%
TGGTTATAATAGTGACCGAA+GGG + Chr2:43024629-43024648 None:intergenic 35.0%
TTACAAAGGCAGAGATCAAT+TGG + Chr2:43026781-43026800 None:intergenic 35.0%
TTCAATCCGTTAACTTCTAC+AGG - Chr2:43025962-43025981 MsG0280008994.01.T01:intron 35.0%
TTCTATGGATAATCGTGCAA+GGG + Chr2:43025997-43026016 None:intergenic 35.0%
TTGGTTATAATAGTGACCGA+AGG + Chr2:43024630-43024649 None:intergenic 35.0%
TTGTCAAACGCTTCTCAAAT+TGG + Chr2:43024035-43024054 None:intergenic 35.0%
! AGATCATGCATTGTTACTTG+TGG - Chr2:43027293-43027312 MsG0280008994.01.T01:CDS 35.0%
! CCACTCATAAAATTCAGGTT+GGG + Chr2:43024876-43024895 None:intergenic 35.0%
! CTGAAATGGTATGCTTGTTT+TGG + Chr2:43022997-43023016 None:intergenic 35.0%
! CTTTGTTTCATTCTCACCTA+TGG + Chr2:43023734-43023753 None:intergenic 35.0%
! GCACTCTAAATTTTCAGAGA+TGG - Chr2:43026258-43026277 MsG0280008994.01.T01:intron 35.0%
! GGTGGTTTACTCAAGAATTT+TGG + Chr2:43026760-43026779 None:intergenic 35.0%
! GTTAATGACTCGATGTCTTT+TGG + Chr2:43023978-43023997 None:intergenic 35.0%
! TCTTTTACAGAAGAATCCCA+TGG + Chr2:43023025-43023044 None:intergenic 35.0%
! TGGTTAGCACATTTTCTAGA+TGG - Chr2:43027179-43027198 MsG0280008994.01.T01:intron 35.0%
! TTCTATGGATTACTCTTCCT+TGG - Chr2:43025756-43025775 MsG0280008994.01.T01:intron 35.0%
!! AAAGATTTGGGTTGACAATG+TGG + Chr2:43025295-43025314 None:intergenic 35.0%
!! AACATTTTGGGCATTAGTCT+CGG - Chr2:43026043-43026062 MsG0280008994.01.T01:intron 35.0%
!! AAGATTTGGGTTGACAATGT+GGG + Chr2:43025294-43025313 None:intergenic 35.0%
!! GTCAAGATAGCTTTATCCTT+TGG - Chr2:43027560-43027579 MsG0280008994.01.T01:five_prime_UTR 35.0%
AAAAGACCCTTCTTTCTCCT+CGG + Chr2:43027362-43027381 None:intergenic 40.0%
AAGTCATGGGAATTATGGAG+TGG - Chr2:43023175-43023194 MsG0280008994.01.T01:CDS 40.0%
AAGTTGCCACTGAAGAAGTA+TGG - Chr2:43026316-43026335 MsG0280008994.01.T01:intron 40.0%
ACCATTTGCATTTGCGCATT+CGG + Chr2:43025863-43025882 None:intergenic 40.0%
ACTAGTCCATACTTCTTCAG+TGG + Chr2:43026325-43026344 None:intergenic 40.0%
CATCATCAGCCATATACAAC+AGG + Chr2:43022924-43022943 None:intergenic 40.0%
CGGAGCTATTTGAACCATAT+GGG - Chr2:43027384-43027403 MsG0280008994.01.T01:CDS 40.0%
CTCAATATCATGTTGCGGAA+TGG + Chr2:43025205-43025224 None:intergenic 40.0%
CTGTTGTATATGGCTGATGA+TGG - Chr2:43022922-43022941 MsG0280008994.01.T01:three_prime_UTR 40.0%
GACAGCCACTCATAAAATTC+AGG + Chr2:43024881-43024900 None:intergenic 40.0%
GATGTAGTTATTCTTGCCAC+AGG - Chr2:43026512-43026531 MsG0280008994.01.T01:intron 40.0%
GCAATGATAGGATATGCTGA+GGG - Chr2:43027119-43027138 MsG0280008994.01.T01:intron 40.0%
GCAGAATACATGGTAATTGG+AGG - Chr2:43027494-43027513 MsG0280008994.01.T01:CDS 40.0%
GCCACTCATAAAATTCAGGT+TGG + Chr2:43024877-43024896 None:intergenic 40.0%
GTGACTCCTGTAGAAGTTAA+CGG + Chr2:43025971-43025990 None:intergenic 40.0%
GTGAGAATGAAACAAAGGGA+TGG - Chr2:43023737-43023756 MsG0280008994.01.T01:intron 40.0%
GTTCAAGGATTTCTCTCTAC+AGG - Chr2:43026599-43026618 MsG0280008994.01.T01:intron 40.0%
GTTCTATGGATAATCGTGCA+AGG + Chr2:43025998-43026017 None:intergenic 40.0%
TACCAATGGTGATAGTAAGG+TGG + Chr2:43026143-43026162 None:intergenic 40.0%
TCTCACTTCAGCAGAATACA+TGG - Chr2:43027484-43027503 MsG0280008994.01.T01:CDS 40.0%
TGATGTACTCAGATAGATGC+AGG + Chr2:43022747-43022766 None:intergenic 40.0%
TGGGAATTATGGAGTGGTAA+TGG - Chr2:43023181-43023200 MsG0280008994.01.T01:CDS 40.0%
TGTAATATGCCATGTTCCCT+TGG + Chr2:43023221-43023240 None:intergenic 40.0%
TGTAATCCGAGGAGAAAGAA+GGG - Chr2:43027353-43027372 MsG0280008994.01.T01:CDS 40.0%
TTATAATCAGTGGGCCCATA+TGG + Chr2:43027401-43027420 None:intergenic 40.0%
TTGGTCACCTTTATATCCTG+TGG + Chr2:43026531-43026550 None:intergenic 40.0%
! AAAGGCCCAGAAGTTTTTAC+AGG - Chr2:43025721-43025740 MsG0280008994.01.T01:intron 40.0%
! AGCTTTAGCTTCTGCAAAGA+AGG - Chr2:43026453-43026472 MsG0280008994.01.T01:intron 40.0%
! CCCAACCTGAATTTTATGAG+TGG - Chr2:43024873-43024892 MsG0280008994.01.T01:intron 40.0%
! CCCAGAAGTTTTTACAGGTA+AGG - Chr2:43025726-43025745 MsG0280008994.01.T01:intron 40.0%
! GAGAAAGAAGGGTCTTTTTG+CGG - Chr2:43027364-43027383 MsG0280008994.01.T01:CDS 40.0%
! GCATTGTTACTTGTGGCATA+TGG - Chr2:43027300-43027319 MsG0280008994.01.T01:CDS 40.0%
! TAGAGAAAGCACAACACTAG+TGG - Chr2:43027533-43027552 MsG0280008994.01.T01:five_prime_UTR 40.0%
! TATGGGCCCACTGATTATAA+TGG - Chr2:43027401-43027420 MsG0280008994.01.T01:CDS 40.0%
!! AGAAGCGTTTGACAAAGACA+TGG - Chr2:43024040-43024059 MsG0280008994.01.T01:intron 40.0%
!! ATATGGCTGATGATGGTGTT+TGG - Chr2:43022929-43022948 MsG0280008994.01.T01:three_prime_UTR 40.0%
!! TTTGCTCAGACTAGTTTGCT+CGG - Chr2:43024906-43024925 MsG0280008994.01.T01:intron 40.0%
!!! AGTGGTAATGGCAGTAGTTT+TGG - Chr2:43023193-43023212 MsG0280008994.01.T01:CDS 40.0%
!!! GAACTTTTAGTTCACAAGCC+CGG - Chr2:43026091-43026110 MsG0280008994.01.T01:intron 40.0%
!!! GGTATGCTTGTTTTGGGTTT+TGG + Chr2:43022990-43023009 None:intergenic 40.0%
AATAGTGAGTTAGTGACCGG+AGG - Chr2:43024752-43024771 MsG0280008994.01.T01:CDS 45.0%
ACATCCTCGCATCCCAAAAT+TGG - Chr2:43027097-43027116 MsG0280008994.01.T01:intron 45.0%
ACGATTGGTGTGGTGCATTA+TGG - Chr2:43024843-43024862 MsG0280008994.01.T01:intron 45.0%
AGAGTTACAGTAGTAGGCTC+AGG - Chr2:43025814-43025833 MsG0280008994.01.T01:intron 45.0%
AGCAGCAGTTTCTTTGTCCA+AGG + Chr2:43025776-43025795 None:intergenic 45.0%
ATAGTGAGTTAGTGACCGGA+GGG - Chr2:43024753-43024772 MsG0280008994.01.T01:CDS 45.0%
ATTGTTGGTGCAGGAATCAG+TGG - Chr2:43022859-43022878 MsG0280008994.01.T01:three_prime_UTR 45.0%
CAAAGGCAGAGATCAATTGG+TGG + Chr2:43026778-43026797 None:intergenic 45.0%
GAGACATGAAGTGTAATCCG+AGG - Chr2:43027342-43027361 MsG0280008994.01.T01:CDS 45.0%
GCGGAGCTATTTGAACCATA+TGG - Chr2:43027383-43027402 MsG0280008994.01.T01:CDS 45.0%
GGCAATGATAGGATATGCTG+AGG - Chr2:43027118-43027137 MsG0280008994.01.T01:intron 45.0%
GGGAACATGGCATATTACAG+TGG - Chr2:43023222-43023241 MsG0280008994.01.T01:CDS 45.0%
GGTATCACTATAACGGTCGT+CGG + Chr2:43024177-43024196 None:intergenic 45.0%
GTGATAGTAAGGTGGCCAAA+AGG + Chr2:43026135-43026154 None:intergenic 45.0%
GTGTAATCCGAGGAGAAAGA+AGG - Chr2:43027352-43027371 MsG0280008994.01.T01:CDS 45.0%
TAATGCACCACACCAATCGT+TGG + Chr2:43024843-43024862 None:intergenic 45.0%
TTATGGTCCAACGATTGGTG+TGG - Chr2:43024833-43024852 MsG0280008994.01.T01:intron 45.0%
! AAAACTTCTGGGCCTTTTCC+AGG + Chr2:43025718-43025737 None:intergenic 45.0%
! AAACTTCTGGGCCTTTTCCA+GGG + Chr2:43025717-43025736 None:intergenic 45.0%
!! ACACTTCCTTCTTGGCCTTT+TGG - Chr2:43026117-43026136 MsG0280008994.01.T01:intron 45.0%
!! ATTTGGGTTGACAATGTGGG+TGG + Chr2:43025291-43025310 None:intergenic 45.0%
!! GTTTTGGATCCAAGGGAACA+TGG - Chr2:43023209-43023228 MsG0280008994.01.T01:CDS 45.0%
!!! ATTGCCAATTTTGGGATGCG+AGG + Chr2:43027104-43027123 None:intergenic 45.0%
!!! GGCAGTAGTTTTGGATCCAA+GGG - Chr2:43023202-43023221 MsG0280008994.01.T01:CDS 45.0%
!!! TGGCAGTAGTTTTGGATCCA+AGG - Chr2:43023201-43023220 MsG0280008994.01.T01:CDS 45.0%
!!! AAGTAAAAAATTTAATTTTA+TGG + Chr2:43024198-43024217 None:intergenic 5.0%
!!! AGTTTTTTTTTTTTTTTTTA+GGG - Chr2:43022789-43022808 MsG0280008994.01.T01:three_prime_UTR 5.0%
!!! TAGTTTTTTTTTTTTTTTTT+AGG - Chr2:43022788-43022807 MsG0280008994.01.T01:three_prime_UTR 5.0%
AACATTCCAGAGTTCCTCCC+TGG - Chr2:43025697-43025716 MsG0280008994.01.T01:intron 50.0%
AGCAACCGAGTTCTCCCTTT+CGG - Chr2:43023700-43023719 MsG0280008994.01.T01:intron 50.0%
AGGGTTGCAATTGTTGGTGC+AGG - Chr2:43022850-43022869 MsG0280008994.01.T01:three_prime_UTR 50.0%
GCCGAATGCGCAAATGCAAA+TGG - Chr2:43025859-43025878 MsG0280008994.01.T01:intron 50.0%
GGCCACCTTACTATCACCAT+TGG - Chr2:43026138-43026157 MsG0280008994.01.T01:intron 50.0%
GGTGTGGTGCATTATGGCAT+TGG - Chr2:43024849-43024868 MsG0280008994.01.T01:intron 50.0%
TTATCCATAGAACTGCGCGC+TGG - Chr2:43026005-43026024 MsG0280008994.01.T01:intron 50.0%
! ATGGTAATTGGAGGGGTGCA+TGG - Chr2:43027503-43027522 MsG0280008994.01.T01:CDS 50.0%
! GTCTATCAAGGTACTCCCTC+CGG + Chr2:43024771-43024790 None:intergenic 50.0%
! TGATGGTGTTTGGAGGACTG+TGG - Chr2:43022939-43022958 MsG0280008994.01.T01:three_prime_UTR 50.0%
!! CCAAGAAGGAAGTGTTCTCC+GGG + Chr2:43026112-43026131 None:intergenic 50.0%
!! GCCAAGAAGGAAGTGTTCTC+CGG + Chr2:43026113-43026132 None:intergenic 50.0%
!! GGGAGGAACTCTGGAATGTT+TGG + Chr2:43025697-43025716 None:intergenic 50.0%
!! TGGCTGATGATGGTGTTTGG+AGG - Chr2:43022932-43022951 MsG0280008994.01.T01:three_prime_UTR 50.0%
AACCGAGTTCTCCCTTTCGG+TGG - Chr2:43023703-43023722 MsG0280008994.01.T01:intron 55.0%
AGGTGGCCAAAAGGCCAAGA+AGG + Chr2:43026126-43026145 None:intergenic 55.0%
CCAGAGTTCCTCCCTGGAAA+AGG - Chr2:43025703-43025722 MsG0280008994.01.T01:intron 55.0%
CCCGGAGAACACTTCCTTCT+TGG - Chr2:43026109-43026128 MsG0280008994.01.T01:intron 55.0%
CTATGGGAACGCCACCGAAA+GGG + Chr2:43023717-43023736 None:intergenic 55.0%
GAAACCAGCGCGCAGTTCTA+TGG + Chr2:43026012-43026031 None:intergenic 55.0%
TGGTGTTTGGAGGACTGTGG+AGG - Chr2:43022942-43022961 MsG0280008994.01.T01:three_prime_UTR 55.0%
! CCTTTTCCAGGGAGGAACTC+TGG + Chr2:43025706-43025725 None:intergenic 55.0%
! TGGGTTGACAATGTGGGTGG+TGG + Chr2:43025288-43025307 None:intergenic 55.0%
CCTATGGGAACGCCACCGAA+AGG + Chr2:43023718-43023737 None:intergenic 60.0%
CCTTTCGGTGGCGTTCCCAT+AGG - Chr2:43023715-43023734 MsG0280008994.01.T01:intron 60.0%
CGCCACCGAAAGGGAGAACT+CGG + Chr2:43023708-43023727 None:intergenic 60.0%
! CTTCTGGGCCTTTTCCAGGG+AGG + Chr2:43025714-43025733 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 43022715 43027751 43022715 ID=MsG0280008994.01;Name=MsG0280008994.01
Chr2 mRNA 43022715 43027751 43022715 ID=MsG0280008994.01.T01;Parent=MsG0280008994.01;Name=MsG0280008994.01.T01;_AED=0.47;_eAED=0.47;_QI=203|0.75|0.8|1|0.75|0.6|5|312|321
Chr2 exon 43022715 43023378 43022715 ID=MsG0280008994.01.T01:exon:27480;Parent=MsG0280008994.01.T01
Chr2 exon 43024440 43024482 43024440 ID=MsG0280008994.01.T01:exon:27479;Parent=MsG0280008994.01.T01
Chr2 exon 43024586 43024823 43024586 ID=MsG0280008994.01.T01:exon:27478;Parent=MsG0280008994.01.T01
Chr2 exon 43027196 43027656 43027196 ID=MsG0280008994.01.T01:exon:27477;Parent=MsG0280008994.01.T01
Chr2 exon 43027677 43027751 43027677 ID=MsG0280008994.01.T01:exon:27476;Parent=MsG0280008994.01.T01
Chr2 five_prime_UTR 43027677 43027751 43027677 ID=MsG0280008994.01.T01:five_prime_utr;Parent=MsG0280008994.01.T01
Chr2 five_prime_UTR 43027529 43027656 43027529 ID=MsG0280008994.01.T01:five_prime_utr;Parent=MsG0280008994.01.T01
Chr2 CDS 43027196 43027528 43027196 ID=MsG0280008994.01.T01:cds;Parent=MsG0280008994.01.T01
Chr2 CDS 43024586 43024823 43024586 ID=MsG0280008994.01.T01:cds;Parent=MsG0280008994.01.T01
Chr2 CDS 43024440 43024482 43024440 ID=MsG0280008994.01.T01:cds;Parent=MsG0280008994.01.T01
Chr2 CDS 43023027 43023378 43023027 ID=MsG0280008994.01.T01:cds;Parent=MsG0280008994.01.T01
Chr2 three_prime_UTR 43022715 43023026 43022715 ID=MsG0280008994.01.T01:three_prime_utr;Parent=MsG0280008994.01.T01
Gene Sequence

>MsG0280008994.01.T01

ATGATGGTGTTTGGAGGACTGTGGAGGCTACTATTGAATCTACAAAACTCCAAAACCCAAAACAAGCATACCATTTCAGATTTTCCATGGGATTCTTCTGTAAAAGAAGATTGTCCAAGTAATAAGCAAGTTCTAGATTATGTTGAATCATATGCTCAACTTTTTCCATTATTCCTTACTAAGATTCATTCCAAAGTCATTGATATAGATTATGTTGGAGAGTCTGATGAAGATATGAAGTCATGGGAATTATGGAGTGGTAATGGCAGTAGTTTTGGATCCAAGGGAACATGGCATATTACAGTGGAAGATACCAAGAATTTCTCAACAAAGGTGCATAAAGCAGAGTTTGTTATTCTTTGCATTGGGAAATATAGTGGTTTTCCAAACATTCCAGAGTTCCTCCCTGGAAAAGGCCCAGAAGTTTTTACAGGTAAGGTTATGCATTCTATGGATTACTCTTCCTTGGACAAAGAAACTGCTGCTAAATTGATAAAAAATAAGAGAGTTACAGTAGTAGGCTCAGGAAAATCTGCTCTTGATATAGCTGCCGAATGCGCAAATGCAAATGGAGTCACTCACCCTTGCACGATTATCCATAGAACTGCGCGCTGGCAAATAATACATCCTCGCATCCCAAAATTGGCAATGATAGGATATGCTGAGGGAATATCAAATATTGTTTCTAATGAAATGAGATGCCAATGGTTAGCACATTTTCTAGATGGAAACATTGAATTGCCTAGTATAAAAGTGATGGAGAAGGATGTTAAATTATGGGAAGACAACATGAAGCAATATTCCAGAAAATTTTATTGGAGATCATGCATTGTTACTTGTGGCATATGGTATAATGATCAATTGTGCAGAGACATGAAGTGTAATCCGAGGAGAAAGAAGGGTCTTTTTGCGGAGCTATTTGAACCATATGGGCCCACTGATTATAATGGTCTTGTTCGTAAATGA
Protein sequence

>MsG0280008994.01.T01

MMVFGGLWRLLLNLQNSKTQNKHTISDFPWDSSVKEDCPSNKQVLDYVESYAQLFPLFLTKIHSKVIDIDYVGESDEDMKSWELWSGNGSSFGSKGTWHITVEDTKNFSTKVHKAEFVILCIGKYSGFPNIPEFLPGKGPEVFTGKVMHSMDYSSLDKETAAKLIKNKRVTVVGSGKSALDIAAECANANGVTHPCTIIHRTARWQIIHPRIPKLAMIGYAEGISNIVSNEMRCQWLAHFLDGNIELPSIKVMEKDVKLWEDNMKQYSRKFYWRSCIVTCGIWYNDQLCRDMKCNPRRKKGLFAELFEPYGPTDYNGLVRK*