Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020898.01.T01 | GAU45792.1 | 89.803 | 304 | 28 | 2 | 1 | 301 | 1 | 304 | 2.74E-170 | 484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020898.01.T01 | Q9LQQ0 | 66.245 | 237 | 70 | 5 | 72 | 301 | 156 | 389 | 1.64E-88 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020898.01.T01 | A0A2Z6P9X2 | 89.803 | 304 | 28 | 2 | 1 | 301 | 1 | 304 | 1.31e-170 | 484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001029.01 | MsG0480020898.01 | 0.805016 | 1.635748e-49 | 8.560661e-47 |
| MsG0180003320.01 | MsG0480020898.01 | 0.806973 | 6.340425e-50 | 3.489102e-47 |
| MsG0480020898.01 | MsG0480020904.01 | 0.813707 | 2.233994e-51 | 1.469593e-48 |
| MsG0480020898.01 | MsG0480021091.01 | 0.816956 | 4.231857e-52 | 3.041747e-49 |
| MsG0480020898.01 | MsG0580026521.01 | 0.813233 | 2.839643e-51 | 1.843949e-48 |
| MsG0480020898.01 | MsG0680031200.01 | 0.833782 | 4.376776e-56 | 5.092774e-53 |
| MsG0480020898.01 | MsG0680032932.01 | 0.801591 | 8.377800e-49 | 4.016258e-46 |
| MsG0480020898.01 | MsG0780036835.01 | 0.821919 | 3.124962e-53 | 2.577169e-50 |
| MsG0480020898.01 | MsG0780038657.01 | 0.801906 | 7.217386e-49 | 3.487904e-46 |
| MsG0480020898.01 | MsG0780040716.01 | 0.803092 | 4.110393e-49 | 2.047188e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020898.01.T01 | MTR_4g062470 | 92.787 | 305 | 17 | 2 | 1 | 301 | 1 | 304 | 2.29e-167 | 466 |
| MsG0480020898.01.T01 | MTR_4g062520 | 94.059 | 303 | 16 | 2 | 1 | 301 | 1 | 303 | 1.15e-159 | 447 |
| MsG0480020898.01.T01 | MTR_1g115510 | 44.043 | 277 | 138 | 9 | 39 | 301 | 80 | 353 | 1.53e-63 | 204 |
| MsG0480020898.01.T01 | MTR_7g021300 | 44.444 | 279 | 131 | 9 | 39 | 300 | 117 | 388 | 6.25e-63 | 204 |
| MsG0480020898.01.T01 | MTR_4g062460 | 41.071 | 224 | 124 | 4 | 80 | 299 | 38 | 257 | 3.05e-51 | 169 |
| MsG0480020898.01.T01 | MTR_1g046800 | 45.575 | 226 | 113 | 5 | 76 | 301 | 35 | 250 | 1.84e-49 | 165 |
| MsG0480020898.01.T01 | MTR_1g046500 | 46.288 | 229 | 107 | 7 | 76 | 301 | 35 | 250 | 3.28e-47 | 159 |
| MsG0480020898.01.T01 | MTR_1g046490 | 45.614 | 228 | 112 | 7 | 76 | 301 | 19 | 236 | 8.94e-46 | 155 |
| MsG0480020898.01.T01 | MTR_1g115515 | 33.484 | 221 | 103 | 9 | 64 | 275 | 24 | 209 | 1.39e-23 | 97.1 |
| MsG0480020898.01.T01 | MTR_7g093820 | 37.383 | 107 | 66 | 1 | 175 | 280 | 71 | 177 | 1.53e-11 | 62.8 |
| MsG0480020898.01.T01 | MTR_7g093850 | 37.383 | 107 | 66 | 1 | 175 | 280 | 71 | 177 | 1.83e-11 | 62.4 |
| MsG0480020898.01.T01 | MTR_7g093830 | 37.383 | 107 | 66 | 1 | 175 | 280 | 70 | 176 | 4.54e-11 | 61.2 |
| MsG0480020898.01.T01 | MTR_4g013310 | 37.000 | 100 | 59 | 3 | 185 | 282 | 87 | 184 | 4.60e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020898.01.T01 | AT1G07730 | 66.245 | 237 | 70 | 5 | 72 | 301 | 156 | 389 | 1.67e-89 | 272 |
| MsG0480020898.01.T01 | AT2G28670 | 67.089 | 237 | 66 | 5 | 74 | 301 | 203 | 436 | 4.51e-88 | 270 |
| MsG0480020898.01.T01 | AT2G28670 | 67.401 | 227 | 64 | 4 | 84 | 301 | 1 | 226 | 3.84e-87 | 260 |
| MsG0480020898.01.T01 | AT3G55230 | 40.328 | 305 | 161 | 8 | 14 | 301 | 3 | 303 | 2.38e-65 | 207 |
| MsG0480020898.01.T01 | AT2G39430 | 46.186 | 236 | 111 | 5 | 80 | 301 | 87 | 320 | 8.68e-62 | 199 |
| MsG0480020898.01.T01 | AT4G13580 | 42.500 | 240 | 114 | 8 | 68 | 301 | 23 | 244 | 5.14e-45 | 153 |
| MsG0480020898.01.T01 | AT3G24020 | 43.363 | 226 | 104 | 8 | 82 | 301 | 36 | 243 | 8.98e-44 | 150 |
| MsG0480020898.01.T01 | AT2G21100 | 34.677 | 124 | 73 | 4 | 156 | 276 | 49 | 167 | 2.70e-12 | 64.7 |
| MsG0480020898.01.T01 | AT2G21100 | 34.677 | 124 | 73 | 4 | 156 | 276 | 49 | 167 | 2.70e-12 | 64.7 |
Find 78 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCAAAGCAGTAATGTTTA+TGG | 0.217219 | 4:-50333128 | MsG0480020898.01.T01:CDS |
| GTGAAACTTGTGTTGTTCTA+TGG | 0.248619 | 4:+50332429 | None:intergenic |
| TGCTATTATTAAGACATTTC+CGG | 0.262574 | 4:-50332351 | MsG0480020898.01.T01:CDS |
| GAAGATAGTCTCAGCTTCTT+TGG | 0.282557 | 4:-50332455 | MsG0480020898.01.T01:CDS |
| GTGTTCAATAACAATAATAA+TGG | 0.298009 | 4:-50332701 | MsG0480020898.01.T01:CDS |
| GAATCAATAATTGGCTCTTC+TGG | 0.300827 | 4:+50333043 | None:intergenic |
| GACTCTGCAGAATCAATAAT+TGG | 0.329686 | 4:+50333034 | None:intergenic |
| CTGGTTGTTGTGGCTGTTGT+TGG | 0.330104 | 4:+50332977 | None:intergenic |
| TAAAAGACAATGCTACTAAT+AGG | 0.334799 | 4:+50332265 | None:intergenic |
| CAATCACAACTTGCAATCAT+TGG | 0.336329 | 4:-50332407 | MsG0480020898.01.T01:CDS |
| AACAACCTTCCTTTCCTAAC+AGG | 0.341039 | 4:-50332746 | MsG0480020898.01.T01:CDS |
| GTTGTTGGGGCGGGAAGTGG+AGG | 0.344016 | 4:+50332992 | None:intergenic |
| GGAGGGAGAATGGCAGAAAC+AGG | 0.347959 | 4:+50333010 | None:intergenic |
| GCTGTTGTTGGGGCGGGAAG+TGG | 0.348382 | 4:+50332989 | None:intergenic |
| CTTGCAATCATTGGAGGAAC+TGG | 0.372185 | 4:-50332398 | MsG0480020898.01.T01:CDS |
| TGTTTCCACTGAGTCCTGTT+AGG | 0.375647 | 4:+50332732 | None:intergenic |
| AGAGGAAGGTTTGCACCATT+TGG | 0.376151 | 4:+50332818 | None:intergenic |
| GACTGCTCTTGCTGTTGGAT+TGG | 0.391229 | 4:+50332892 | None:intergenic |
| GGAAAGTATGTGAATGCTAA+TGG | 0.401273 | 4:-50332377 | MsG0480020898.01.T01:CDS |
| CCATAAACATTACTGCTTTG+AGG | 0.401351 | 4:+50333128 | None:intergenic |
| TGGTTGTTGTGGCTGTTGTT+GGG | 0.402972 | 4:+50332978 | None:intergenic |
| CATAAACATTACTGCTTTGA+GGG | 0.405427 | 4:+50333129 | None:intergenic |
| ACTGCAAAGTTTGAAGAGAA+TGG | 0.412582 | 4:-50332482 | MsG0480020898.01.T01:CDS |
| CCGGTGACTGCTCTTGCTGT+TGG | 0.415614 | 4:+50332887 | None:intergenic |
| TGTTCAATAACAATAATAAT+GGG | 0.421227 | 4:-50332700 | MsG0480020898.01.T01:CDS |
| ATGCTACTAATAGGAAAGAT+AGG | 0.439504 | 4:+50332274 | None:intergenic |
| GAGTTGGGATCAGGATTAGT+TGG | 0.447746 | 4:-50332566 | MsG0480020898.01.T01:CDS |
| GTTGTGGCTGTTGTTGGGGC+GGG | 0.451477 | 4:+50332983 | None:intergenic |
| TGTGGAACACCGTTGTTTAG+AGG | 0.452866 | 4:+50332800 | None:intergenic |
| TAATGGGAACAACAATTTCC+CGG | 0.455044 | 4:-50332684 | MsG0480020898.01.T01:CDS |
| GGCGGGAAGTGGAGGGAGAA+TGG | 0.476292 | 4:+50333000 | None:intergenic |
| GAAGGTGAAGAGTTGGGATC+AGG | 0.478076 | 4:-50332575 | MsG0480020898.01.T01:CDS |
| ATCTGATTCATATTTGTCAC+CGG | 0.479970 | 4:+50332665 | None:intergenic |
| ACGGTGCAGGAGCTGATGTT+TGG | 0.486630 | 4:-50332629 | MsG0480020898.01.T01:CDS |
| GATAGTGTGTGGTGCTGATC+GGG | 0.493125 | 4:+50332944 | None:intergenic |
| AAATGCAACTTGAGCATTGA+GGG | 0.497150 | 4:+50332847 | None:intergenic |
| GTTGCATTTGCAAAGCCAAA+TGG | 0.506019 | 4:-50332833 | MsG0480020898.01.T01:CDS |
| GCAACTTGAGCATTGAGGGC+TGG | 0.515971 | 4:+50332851 | None:intergenic |
| TGTTGTGGCTGTTGTTGGGG+CGG | 0.518930 | 4:+50332982 | None:intergenic |
| CTGACAGAAGGTGAAGAGTT+GGG | 0.519027 | 4:-50332581 | MsG0480020898.01.T01:CDS |
| ACTGACAGAAGGTGAAGAGT+TGG | 0.521230 | 4:-50332582 | MsG0480020898.01.T01:CDS |
| GGTTGTTGTGGCTGTTGTTG+GGG | 0.530841 | 4:+50332979 | None:intergenic |
| AATAGGAAAGATAGGCAGTA+AGG | 0.535211 | 4:+50332282 | None:intergenic |
| CTGATCGGGAATATCAGTAC+TGG | 0.538711 | 4:+50332958 | None:intergenic |
| CGATAGTGTGTGGTGCTGAT+CGG | 0.540241 | 4:+50332943 | None:intergenic |
| TCAGATACCGCAGGGAACTA+CGG | 0.544866 | 4:-50332648 | MsG0480020898.01.T01:CDS |
| ACCGCAGGGAACTACGGTGC+AGG | 0.547161 | 4:-50332642 | MsG0480020898.01.T01:CDS |
| CAAATGCAACTTGAGCATTG+AGG | 0.547690 | 4:+50332846 | None:intergenic |
| ATTAAGACATTTCCGGTCAA+CGG | 0.552577 | 4:-50332344 | MsG0480020898.01.T01:CDS |
| TATATAGCAAGTTCAGTGGA+AGG | 0.554582 | 4:-50332527 | MsG0480020898.01.T01:CDS |
| AAATATGAATCAGATACCGC+AGG | 0.559468 | 4:-50332657 | MsG0480020898.01.T01:CDS |
| CCGTTGTTGTTATTGTTCTG+TGG | 0.560255 | 4:+50332782 | None:intergenic |
| GAACACCGTTGTTTAGAGGA+AGG | 0.560878 | 4:+50332804 | None:intergenic |
| TTGTTGGGGCGGGAAGTGGA+GGG | 0.562976 | 4:+50332993 | None:intergenic |
| GAGGGAGAATGGCAGAAACA+GGG | 0.564739 | 4:+50333011 | None:intergenic |
| CCACTGAGTCCTGTTAGGAA+AGG | 0.582525 | 4:+50332737 | None:intergenic |
| TTATGTTGCTGACCGTTGAC+CGG | 0.583010 | 4:+50332332 | None:intergenic |
| TGAGTCCTGTTAGGAAAGGA+AGG | 0.583798 | 4:+50332741 | None:intergenic |
| GGTCAGCAACATAACACTGA+TGG | 0.587355 | 4:-50332323 | MsG0480020898.01.T01:CDS |
| GGAAGGAACAAGTCAAGTAA+TGG | 0.591485 | 4:-50332510 | MsG0480020898.01.T01:CDS |
| TCTGATTCATATTTGTCACC+GGG | 0.593426 | 4:+50332666 | None:intergenic |
| TCACAACTTGCAATCATTGG+AGG | 0.595719 | 4:-50332404 | MsG0480020898.01.T01:CDS |
| GGCTGGATTTGTAACGACTC+CGG | 0.596482 | 4:+50332868 | None:intergenic |
| GAGAATTCGACTTGAAGTTG+TGG | 0.609406 | 4:+50333081 | None:intergenic |
| CCAACAGCAAGAGCAGTCAC+CGG | 0.623314 | 4:-50332887 | MsG0480020898.01.T01:CDS |
| ATAAACATTACTGCTTTGAG+GGG | 0.625588 | 4:+50333130 | None:intergenic |
| AGGGAGAATGGCAGAAACAG+GGG | 0.633137 | 4:+50333012 | None:intergenic |
| AATATCAGTACTGGTTGTTG+TGG | 0.635456 | 4:+50332967 | None:intergenic |
| ACAGGACTCAGTGGAAACAC+AGG | 0.641402 | 4:-50332728 | MsG0480020898.01.T01:CDS |
| GGATTAGTTGGAAAAGCACA+AGG | 0.642418 | 4:-50332554 | MsG0480020898.01.T01:CDS |
| CCTTTCCTAACAGGACTCAG+TGG | 0.645694 | 4:-50332737 | MsG0480020898.01.T01:CDS |
| AATATGAATCAGATACCGCA+GGG | 0.649401 | 4:-50332656 | MsG0480020898.01.T01:CDS |
| TTCATGCATGACATTCTAGG+CGG | 0.662932 | 4:-50332917 | MsG0480020898.01.T01:CDS |
| CCACAGAACAATAACAACAA+CGG | 0.678132 | 4:-50332782 | MsG0480020898.01.T01:CDS |
| TCCTGCACCGTAGTTCCCTG+CGG | 0.684170 | 4:+50332641 | None:intergenic |
| TACTGCTTTGAGGGGCACAG+TGG | 0.685787 | 4:+50333138 | None:intergenic |
| GCAAACCTTCCTCTAAACAA+CGG | 0.694285 | 4:-50332809 | MsG0480020898.01.T01:CDS |
| TTTGATGATGAACTGACAGA+AGG | 0.695500 | 4:-50332593 | MsG0480020898.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTCAATAACAATAATAAT+GGG | - | Chr4:50332743-50332762 | MsG0480020898.01.T01:CDS | 15.0% |
| !! | GTGTTCAATAACAATAATAA+TGG | - | Chr4:50332742-50332761 | MsG0480020898.01.T01:CDS | 20.0% |
| ! | TGCTATTATTAAGACATTTC+CGG | - | Chr4:50333092-50333111 | MsG0480020898.01.T01:CDS | 25.0% |
| !! | ATTTTATATAGCAAGTTCAG+TGG | - | Chr4:50332912-50332931 | MsG0480020898.01.T01:CDS | 25.0% |
| ATCTGATTCATATTTGTCAC+CGG | + | Chr4:50332781-50332800 | None:intergenic | 30.0% | |
| CATAAACATTACTGCTTTGA+GGG | + | Chr4:50332317-50332336 | None:intergenic | 30.0% | |
| ! | ATAAACATTACTGCTTTGAG+GGG | + | Chr4:50332316-50332335 | None:intergenic | 30.0% |
| ! | TTTTTCATGCATGACATTCT+AGG | - | Chr4:50332523-50332542 | MsG0480020898.01.T01:CDS | 30.0% |
| AAATATGAATCAGATACCGC+AGG | - | Chr4:50332786-50332805 | MsG0480020898.01.T01:CDS | 35.0% | |
| AATAGGAAAGATAGGCAGTA+AGG | + | Chr4:50333164-50333183 | None:intergenic | 35.0% | |
| AATATGAATCAGATACCGCA+GGG | - | Chr4:50332787-50332806 | MsG0480020898.01.T01:CDS | 35.0% | |
| ACTGCAAAGTTTGAAGAGAA+TGG | - | Chr4:50332961-50332980 | MsG0480020898.01.T01:CDS | 35.0% | |
| ATTAAGACATTTCCGGTCAA+CGG | - | Chr4:50333099-50333118 | MsG0480020898.01.T01:CDS | 35.0% | |
| CAATCACAACTTGCAATCAT+TGG | - | Chr4:50333036-50333055 | MsG0480020898.01.T01:CDS | 35.0% | |
| CCACAGAACAATAACAACAA+CGG | - | Chr4:50332661-50332680 | MsG0480020898.01.T01:CDS | 35.0% | |
| CCATAAACATTACTGCTTTG+AGG | + | Chr4:50332318-50332337 | None:intergenic | 35.0% | |
| CCTCAAAGCAGTAATGTTTA+TGG | - | Chr4:50332315-50332334 | MsG0480020898.01.T01:CDS | 35.0% | |
| GACTCTGCAGAATCAATAAT+TGG | + | Chr4:50332412-50332431 | None:intergenic | 35.0% | |
| TAATGGGAACAACAATTTCC+CGG | - | Chr4:50332759-50332778 | MsG0480020898.01.T01:CDS | 35.0% | |
| TATATAGCAAGTTCAGTGGA+AGG | - | Chr4:50332916-50332935 | MsG0480020898.01.T01:CDS | 35.0% | |
| TCTGATTCATATTTGTCACC+GGG | + | Chr4:50332780-50332799 | None:intergenic | 35.0% | |
| ! | GAATCAATAATTGGCTCTTC+TGG | + | Chr4:50332403-50332422 | None:intergenic | 35.0% |
| ! | GGAAAGTATGTGAATGCTAA+TGG | - | Chr4:50333066-50333085 | MsG0480020898.01.T01:CDS | 35.0% |
| ! | GTGAAACTTGTGTTGTTCTA+TGG | + | Chr4:50333017-50333036 | None:intergenic | 35.0% |
| !! | AAATGCAACTTGAGCATTGA+GGG | + | Chr4:50332599-50332618 | None:intergenic | 35.0% |
| !! | AATATCAGTACTGGTTGTTG+TGG | + | Chr4:50332479-50332498 | None:intergenic | 35.0% |
| !! | TTTGATGATGAACTGACAGA+AGG | - | Chr4:50332850-50332869 | MsG0480020898.01.T01:CDS | 35.0% |
| AACAACCTTCCTTTCCTAAC+AGG | - | Chr4:50332697-50332716 | MsG0480020898.01.T01:CDS | 40.0% | |
| GAAGATAGTCTCAGCTTCTT+TGG | - | Chr4:50332988-50333007 | MsG0480020898.01.T01:CDS | 40.0% | |
| GCAAACCTTCCTCTAAACAA+CGG | - | Chr4:50332634-50332653 | MsG0480020898.01.T01:CDS | 40.0% | |
| GCATGAAAAACGATAGTGTG+TGG | + | Chr4:50332513-50332532 | None:intergenic | 40.0% | |
| GGAAGGAACAAGTCAAGTAA+TGG | - | Chr4:50332933-50332952 | MsG0480020898.01.T01:CDS | 40.0% | |
| GTTGCATTTGCAAAGCCAAA+TGG | - | Chr4:50332610-50332629 | MsG0480020898.01.T01:CDS | 40.0% | |
| TCACAACTTGCAATCATTGG+AGG | - | Chr4:50333039-50333058 | MsG0480020898.01.T01:CDS | 40.0% | |
| TTCATGCATGACATTCTAGG+CGG | - | Chr4:50332526-50332545 | MsG0480020898.01.T01:CDS | 40.0% | |
| ! | CAAATGCAACTTGAGCATTG+AGG | + | Chr4:50332600-50332619 | None:intergenic | 40.0% |
| ! | CCGTTGTTGTTATTGTTCTG+TGG | + | Chr4:50332664-50332683 | None:intergenic | 40.0% |
| ! | GAGAATTCGACTTGAAGTTG+TGG | + | Chr4:50332365-50332384 | None:intergenic | 40.0% |
| !! | GGATTAGTTGGAAAAGCACA+AGG | - | Chr4:50332889-50332908 | MsG0480020898.01.T01:CDS | 40.0% |
| ACTGACAGAAGGTGAAGAGT+TGG | - | Chr4:50332861-50332880 | MsG0480020898.01.T01:CDS | 45.0% | |
| AGAGGAAGGTTTGCACCATT+TGG | + | Chr4:50332628-50332647 | None:intergenic | 45.0% | |
| CTGACAGAAGGTGAAGAGTT+GGG | - | Chr4:50332862-50332881 | MsG0480020898.01.T01:CDS | 45.0% | |
| CTGATCGGGAATATCAGTAC+TGG | + | Chr4:50332488-50332507 | None:intergenic | 45.0% | |
| CTTGCAATCATTGGAGGAAC+TGG | - | Chr4:50333045-50333064 | MsG0480020898.01.T01:CDS | 45.0% | |
| GAACACCGTTGTTTAGAGGA+AGG | + | Chr4:50332642-50332661 | None:intergenic | 45.0% | |
| GGTCAGCAACATAACACTGA+TGG | - | Chr4:50333120-50333139 | MsG0480020898.01.T01:CDS | 45.0% | |
| TGAGTCCTGTTAGGAAAGGA+AGG | + | Chr4:50332705-50332724 | None:intergenic | 45.0% | |
| TGGTTGTTGTGGCTGTTGTT+GGG | + | Chr4:50332468-50332487 | None:intergenic | 45.0% | |
| TGTGGAACACCGTTGTTTAG+AGG | + | Chr4:50332646-50332665 | None:intergenic | 45.0% | |
| TGTTTCCACTGAGTCCTGTT+AGG | + | Chr4:50332714-50332733 | None:intergenic | 45.0% | |
| TTATGTTGCTGACCGTTGAC+CGG | + | Chr4:50333114-50333133 | None:intergenic | 45.0% | |
| ! | GAGTTGGGATCAGGATTAGT+TGG | - | Chr4:50332877-50332896 | MsG0480020898.01.T01:CDS | 45.0% |
| ACAGGACTCAGTGGAAACAC+AGG | - | Chr4:50332715-50332734 | MsG0480020898.01.T01:CDS | 50.0% | |
| AGGGAGAATGGCAGAAACAG+GGG | + | Chr4:50332434-50332453 | None:intergenic | 50.0% | |
| CCACTGAGTCCTGTTAGGAA+AGG | + | Chr4:50332709-50332728 | None:intergenic | 50.0% | |
| CCTTTCCTAACAGGACTCAG+TGG | - | Chr4:50332706-50332725 | MsG0480020898.01.T01:CDS | 50.0% | |
| CTGGTTGTTGTGGCTGTTGT+TGG | + | Chr4:50332469-50332488 | None:intergenic | 50.0% | |
| GAAGGTGAAGAGTTGGGATC+AGG | - | Chr4:50332868-50332887 | MsG0480020898.01.T01:CDS | 50.0% | |
| GAGGGAGAATGGCAGAAACA+GGG | + | Chr4:50332435-50332454 | None:intergenic | 50.0% | |
| GGCTGGATTTGTAACGACTC+CGG | + | Chr4:50332578-50332597 | None:intergenic | 50.0% | |
| GGTTGTTGTGGCTGTTGTTG+GGG | + | Chr4:50332467-50332486 | None:intergenic | 50.0% | |
| TCAGATACCGCAGGGAACTA+CGG | - | Chr4:50332795-50332814 | MsG0480020898.01.T01:CDS | 50.0% | |
| !! | CGATAGTGTGTGGTGCTGAT+CGG | + | Chr4:50332503-50332522 | None:intergenic | 50.0% |
| !! | GACTGCTCTTGCTGTTGGAT+TGG | + | Chr4:50332554-50332573 | None:intergenic | 50.0% |
| !! | GATAGTGTGTGGTGCTGATC+GGG | + | Chr4:50332502-50332521 | None:intergenic | 50.0% |
| ACGGTGCAGGAGCTGATGTT+TGG | - | Chr4:50332814-50332833 | MsG0480020898.01.T01:CDS | 55.0% | |
| CCAACAGCAAGAGCAGTCAC+CGG | - | Chr4:50332556-50332575 | MsG0480020898.01.T01:CDS | 55.0% | |
| GGAGGGAGAATGGCAGAAAC+AGG | + | Chr4:50332436-50332455 | None:intergenic | 55.0% | |
| TGTTGTGGCTGTTGTTGGGG+CGG | + | Chr4:50332464-50332483 | None:intergenic | 55.0% | |
| !! | GCAACTTGAGCATTGAGGGC+TGG | + | Chr4:50332595-50332614 | None:intergenic | 55.0% |
| !! | TACTGCTTTGAGGGGCACAG+TGG | + | Chr4:50332308-50332327 | None:intergenic | 55.0% |
| GTTGTGGCTGTTGTTGGGGC+GGG | + | Chr4:50332463-50332482 | None:intergenic | 60.0% | |
| TCCTGCACCGTAGTTCCCTG+CGG | + | Chr4:50332805-50332824 | None:intergenic | 60.0% | |
| TTGTTGGGGCGGGAAGTGGA+GGG | + | Chr4:50332453-50332472 | None:intergenic | 60.0% | |
| ! | CCGGTGACTGCTCTTGCTGT+TGG | + | Chr4:50332559-50332578 | None:intergenic | 60.0% |
| ACCGCAGGGAACTACGGTGC+AGG | - | Chr4:50332801-50332820 | MsG0480020898.01.T01:CDS | 65.0% | |
| GCTGTTGTTGGGGCGGGAAG+TGG | + | Chr4:50332457-50332476 | None:intergenic | 65.0% | |
| GGCGGGAAGTGGAGGGAGAA+TGG | + | Chr4:50332446-50332465 | None:intergenic | 65.0% | |
| GTTGTTGGGGCGGGAAGTGG+AGG | + | Chr4:50332454-50332473 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 50332280 | 50333185 | 50332280 | ID=MsG0480020898.01;Name=MsG0480020898.01 |
| Chr4 | mRNA | 50332280 | 50333185 | 50332280 | ID=MsG0480020898.01.T01;Parent=MsG0480020898.01;Name=MsG0480020898.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|301 |
| Chr4 | exon | 50332280 | 50333185 | 50332280 | ID=MsG0480020898.01.T01:exon:950;Parent=MsG0480020898.01.T01 |
| Chr4 | CDS | 50332280 | 50333185 | 50332280 | ID=MsG0480020898.01.T01:cds;Parent=MsG0480020898.01.T01 |
| Gene Sequence |
| Protein sequence |
