Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003320.01.T01 | XP_013467943.1 | 96.923 | 130 | 4 | 0 | 1 | 130 | 38 | 167 | 8.96E-84 | 254 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003320.01.T01 | C6TH93 | 83.846 | 130 | 21 | 0 | 1 | 130 | 52 | 181 | 1.22E-70 | 214 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003320.01.T01 | A0A072VV58 | 96.923 | 130 | 4 | 0 | 1 | 130 | 38 | 167 | 4.28e-84 | 254 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048134.01 | MsG0180003320.01 | 0.845059 | 5.141528e-59 | 8.465126e-56 |
MsG0080048506.01 | MsG0180003320.01 | 0.802803 | 4.717634e-49 | 2.332592e-46 |
MsG0080048507.01 | MsG0180003320.01 | 0.803537 | 3.324673e-49 | 1.675061e-46 |
MsG0080048509.01 | MsG0180003320.01 | 0.804627 | 1.972811e-49 | 1.022129e-46 |
MsG0080048745.01 | MsG0180003320.01 | 0.813693 | 2.249086e-51 | 1.478967e-48 |
MsG0080049046.01 | MsG0180003320.01 | 0.805595 | 1.237353e-49 | 6.572623e-47 |
MsG0180000017.01 | MsG0180003320.01 | -0.805372 | 1.378096e-49 | 7.278480e-47 |
MsG0180000029.01 | MsG0180003320.01 | 0.864387 | 1.261692e-64 | 3.954308e-61 |
MsG0180000040.01 | MsG0180003320.01 | -0.825681 | 4.105976e-54 | 3.768511e-51 |
MsG0180000147.01 | MsG0180003320.01 | 0.804399 | 2.200922e-49 | 1.133632e-46 |
MsG0180000148.01 | MsG0180003320.01 | 0.802651 | 5.069379e-49 | 2.496698e-46 |
MsG0180000386.01 | MsG0180003320.01 | 0.804283 | 2.326473e-49 | 1.194778e-46 |
MsG0180000489.01 | MsG0180003320.01 | -0.803524 | 3.346581e-49 | 1.685530e-46 |
MsG0180000490.01 | MsG0180003320.01 | -0.801088 | 1.061904e-48 | 5.027021e-46 |
MsG0180000491.01 | MsG0180003320.01 | -0.810669 | 1.027271e-50 | 6.230795e-48 |
MsG0180000497.01 | MsG0180003320.01 | 0.806370 | 8.501485e-50 | 4.606385e-47 |
MsG0180000549.01 | MsG0180003320.01 | -0.805605 | 1.231346e-49 | 6.542380e-47 |
MsG0180000897.01 | MsG0180003320.01 | 0.806082 | 9.777945e-50 | 5.259230e-47 |
MsG0180000976.01 | MsG0180003320.01 | -0.804604 | 1.995037e-49 | 1.033048e-46 |
MsG0180001004.01 | MsG0180003320.01 | 0.804334 | 2.270183e-49 | 1.167398e-46 |
MsG0180001008.01 | MsG0180003320.01 | 0.804726 | 1.880815e-49 | 9.770668e-47 |
MsG0180001029.01 | MsG0180003320.01 | 0.868311 | 7.177660e-66 | 2.584190e-62 |
MsG0180001084.01 | MsG0180003320.01 | 0.807654 | 4.548460e-50 | 2.547609e-47 |
MsG0180001515.01 | MsG0180003320.01 | 0.823234 | 1.545453e-53 | 1.323049e-50 |
MsG0180001827.01 | MsG0180003320.01 | -0.811895 | 5.568429e-51 | 3.488742e-48 |
MsG0180001915.01 | MsG0180003320.01 | 0.814168 | 1.767602e-51 | 1.177361e-48 |
MsG0180002238.01 | MsG0180003320.01 | 0.826893 | 2.113021e-54 | 2.007712e-51 |
MsG0180002255.01 | MsG0180003320.01 | 0.802881 | 4.544948e-49 | 2.251631e-46 |
MsG0180002364.01 | MsG0180003320.01 | 0.801280 | 9.699546e-49 | 4.613825e-46 |
MsG0180003320.01 | MsG0180003322.01 | 0.868008 | 8.983673e-66 | 3.199742e-62 |
MsG0180003320.01 | MsG0180003375.01 | 0.806521 | 7.902014e-50 | 4.298042e-47 |
MsG0180003320.01 | MsG0180003452.01 | 0.808719 | 2.696982e-50 | 1.553337e-47 |
MsG0180003320.01 | MsG0180003484.01 | 0.817683 | 2.903775e-52 | 2.128924e-49 |
MsG0180003320.01 | MsG0180003504.01 | 0.802429 | 5.633792e-49 | 2.759208e-46 |
MsG0180003320.01 | MsG0180003505.01 | 0.802080 | 6.646455e-49 | 3.226210e-46 |
MsG0180003320.01 | MsG0180004059.01 | 0.805082 | 1.585123e-49 | 8.309808e-47 |
MsG0180003320.01 | MsG0180004232.01 | 0.837163 | 6.111633e-57 | 7.871923e-54 |
MsG0180003320.01 | MsG0180004322.01 | -0.803189 | 3.925214e-49 | 1.959969e-46 |
MsG0180003320.01 | MsG0180004359.01 | 0.841713 | 4.020372e-58 | 5.957659e-55 |
MsG0180003320.01 | MsG0180004549.01 | 0.849638 | 2.843534e-60 | 5.425718e-57 |
MsG0180003320.01 | MsG0180004610.01 | 0.802974 | 4.348854e-49 | 2.159442e-46 |
MsG0180003320.01 | MsG0180004626.01 | 0.814445 | 1.534840e-51 | 1.030070e-48 |
MsG0180003320.01 | MsG0180004792.01 | -0.803246 | 3.819669e-49 | 1.910018e-46 |
MsG0180003320.01 | MsG0180004880.01 | 0.802635 | 5.109706e-49 | 2.515556e-46 |
MsG0180003320.01 | MsG0180004937.01 | -0.800008 | 1.762622e-48 | 8.118086e-46 |
MsG0180003320.01 | MsG0180004948.01 | 0.821637 | 3.631660e-53 | 2.971063e-50 |
MsG0180003320.01 | MsG0180005059.01 | 0.804604 | 1.994688e-49 | 1.032876e-46 |
MsG0180003320.01 | MsG0180005082.01 | 0.805734 | 1.156856e-49 | 6.167642e-47 |
MsG0180003320.01 | MsG0180005130.01 | 0.811984 | 5.324953e-51 | 3.344299e-48 |
MsG0180003320.01 | MsG0180005143.01 | 0.814046 | 1.880071e-51 | 1.248175e-48 |
MsG0180003320.01 | MsG0180005267.01 | 0.830434 | 2.942630e-55 | 3.099935e-52 |
MsG0180003320.01 | MsG0180005571.01 | 0.806614 | 7.553256e-50 | 4.118020e-47 |
MsG0180003320.01 | MsG0180005648.01 | 0.801619 | 8.265161e-49 | 3.965114e-46 |
MsG0180003320.01 | MsG0180005898.01 | -0.811002 | 8.702495e-51 | 5.326019e-48 |
MsG0180003320.01 | MsG0180005906.01 | 0.823745 | 1.173965e-53 | 1.019758e-50 |
MsG0180003320.01 | MsG0180006174.01 | 0.809944 | 1.472936e-50 | 8.764566e-48 |
MsG0180003320.01 | MsG0180006195.01 | 0.836463 | 9.223607e-57 | 1.163254e-53 |
MsG0180003320.01 | MsG0180006253.01 | 0.803979 | 2.691277e-49 | 1.371438e-46 |
MsG0180003320.01 | MsG0280006316.01 | 0.829782 | 4.244693e-55 | 4.388795e-52 |
MsG0180003320.01 | MsG0280006546.01 | 0.843192 | 1.630139e-58 | 2.530554e-55 |
MsG0180003320.01 | MsG0280006560.01 | 0.823927 | 1.063839e-53 | 9.287730e-51 |
MsG0180003320.01 | MsG0280006575.01 | 0.819146 | 1.353426e-52 | 1.033042e-49 |
MsG0180003320.01 | MsG0280006579.01 | 0.839441 | 1.581968e-57 | 2.184933e-54 |
MsG0180003320.01 | MsG0280006706.01 | -0.808310 | 3.298611e-50 | 1.879756e-47 |
MsG0180003320.01 | MsG0280007199.01 | 0.806031 | 1.001963e-49 | 5.382342e-47 |
MsG0180003320.01 | MsG0280007511.01 | -0.801548 | 8.548378e-49 | 4.093658e-46 |
MsG0180003320.01 | MsG0280007513.01 | 0.823910 | 1.074181e-53 | 9.373538e-51 |
MsG0180003320.01 | MsG0280007689.01 | 0.839097 | 1.942717e-57 | 2.654923e-54 |
MsG0180003320.01 | MsG0280007908.01 | 0.808677 | 2.753304e-50 | 1.584079e-47 |
MsG0180003320.01 | MsG0280007909.01 | 0.823603 | 1.266999e-53 | 1.096057e-50 |
MsG0180003320.01 | MsG0280007910.01 | 0.812711 | 3.694477e-51 | 2.365990e-48 |
MsG0180003320.01 | MsG0280007937.01 | 0.828704 | 7.752994e-55 | 7.765909e-52 |
MsG0180003320.01 | MsG0280008178.01 | 0.810441 | 1.150818e-50 | 6.937395e-48 |
MsG0180003320.01 | MsG0280008180.01 | 0.815116 | 1.090286e-51 | 7.450440e-49 |
MsG0180003320.01 | MsG0280009232.01 | 0.839932 | 1.178419e-57 | 1.652479e-54 |
MsG0180003320.01 | MsG0280009253.01 | 0.825392 | 4.806489e-54 | 4.375206e-51 |
MsG0180003320.01 | MsG0280009432.01 | 0.800645 | 1.307499e-48 | 6.120209e-46 |
MsG0180003320.01 | MsG0280009526.01 | 0.809523 | 1.814524e-50 | 1.067758e-47 |
MsG0180003320.01 | MsG0280009644.01 | 0.803315 | 3.696229e-49 | 1.851516e-46 |
MsG0180003320.01 | MsG0280009654.01 | 0.802021 | 6.835122e-49 | 3.312794e-46 |
MsG0180003320.01 | MsG0280009667.01 | 0.808107 | 3.643607e-50 | 2.065224e-47 |
MsG0180003320.01 | MsG0280010005.01 | 0.801863 | 7.366595e-49 | 3.556192e-46 |
MsG0180003320.01 | MsG0280010425.01 | 0.820948 | 5.237944e-53 | 4.203912e-50 |
MsG0180003320.01 | MsG0280010539.01 | 0.808823 | 2.563069e-50 | 1.480305e-47 |
MsG0180003320.01 | MsG0280010623.01 | 0.815305 | 9.897908e-52 | 6.799118e-49 |
MsG0180003320.01 | MsG0280010936.01 | 0.820078 | 8.293021e-53 | 6.497419e-50 |
MsG0180003320.01 | MsG0280011110.01 | 0.800165 | 1.637818e-48 | 7.573203e-46 |
MsG0180003320.01 | MsG0280011128.01 | 0.811887 | 5.592615e-51 | 3.503024e-48 |
MsG0180003320.01 | MsG0280011292.01 | 0.806186 | 9.295515e-50 | 5.013246e-47 |
MsG0180003320.01 | MsG0380011701.01 | 0.831805 | 1.355577e-55 | 1.487311e-52 |
MsG0180003320.01 | MsG0380011702.01 | 0.810295 | 1.237778e-50 | 7.432733e-48 |
MsG0180003320.01 | MsG0380011968.01 | 0.809504 | 1.831691e-50 | 1.077315e-47 |
MsG0180003320.01 | MsG0380012222.01 | 0.845130 | 4.919565e-59 | 8.116901e-56 |
MsG0180003320.01 | MsG0380012782.01 | -0.801375 | 9.277623e-49 | 4.423566e-46 |
MsG0180003320.01 | MsG0380012900.01 | 0.801044 | 1.083929e-48 | 5.125659e-46 |
MsG0180003320.01 | MsG0380013213.01 | 0.802648 | 5.076581e-49 | 2.500077e-46 |
MsG0180003320.01 | MsG0380013263.01 | 0.826249 | 3.008965e-54 | 2.806763e-51 |
MsG0180003320.01 | MsG0380014231.01 | -0.800909 | 1.155242e-48 | 5.444085e-46 |
MsG0180003320.01 | MsG0380014466.01 | -0.805719 | 1.165447e-49 | 6.210918e-47 |
MsG0180003320.01 | MsG0380014510.01 | -0.807797 | 4.240626e-50 | 2.384139e-47 |
MsG0180003320.01 | MsG0380015110.01 | 0.806212 | 9.178934e-50 | 4.953677e-47 |
MsG0180003320.01 | MsG0380015659.01 | 0.842129 | 3.123001e-58 | 4.689254e-55 |
MsG0180003320.01 | MsG0380015660.01 | 0.825011 | 5.913001e-54 | 5.325028e-51 |
MsG0180003320.01 | MsG0380015795.01 | -0.805278 | 1.441782e-49 | 7.596356e-47 |
MsG0180003320.01 | MsG0380016299.01 | 0.843485 | 1.361120e-58 | 2.132738e-55 |
MsG0180003320.01 | MsG0380016300.01 | 0.812546 | 4.014260e-51 | 2.559778e-48 |
MsG0180003320.01 | MsG0380016377.01 | 0.812294 | 4.558993e-51 | 2.887534e-48 |
MsG0180003320.01 | MsG0380016452.01 | -0.811665 | 6.249686e-51 | 3.891561e-48 |
MsG0180003320.01 | MsG0380016456.01 | -0.809039 | 2.303711e-50 | 1.338231e-47 |
MsG0180003320.01 | MsG0380016490.01 | 0.881467 | 2.342169e-70 | 1.373860e-66 |
MsG0180003320.01 | MsG0380017033.01 | -0.806865 | 6.682480e-50 | 3.667179e-47 |
MsG0180003320.01 | MsG0380017168.01 | 0.859003 | 5.586241e-63 | 1.453441e-59 |
MsG0180003320.01 | MsG0380017353.01 | -0.800497 | 1.401571e-48 | 6.535896e-46 |
MsG0180003320.01 | MsG0380017762.01 | -0.812318 | 4.503186e-51 | 2.854032e-48 |
MsG0180003320.01 | MsG0380017901.01 | 0.867673 | 1.150429e-65 | 4.050031e-62 |
MsG0180003320.01 | MsG0380017976.01 | -0.807168 | 5.765652e-50 | 3.188902e-47 |
MsG0180003320.01 | MsG0380018004.01 | 0.812807 | 3.521193e-51 | 2.260468e-48 |
MsG0180003320.01 | MsG0480018329.01 | -0.802079 | 6.650925e-49 | 3.228267e-46 |
MsG0180003320.01 | MsG0480018337.01 | -0.813047 | 3.119712e-51 | 2.015693e-48 |
MsG0180003320.01 | MsG0480018338.01 | -0.800737 | 1.252751e-48 | 5.877490e-46 |
MsG0180003320.01 | MsG0480018362.01 | 0.805663 | 1.197263e-49 | 6.370955e-47 |
MsG0180003320.01 | MsG0480018406.01 | 0.808735 | 2.675995e-50 | 1.541896e-47 |
MsG0180003320.01 | MsG0480018409.01 | 0.807791 | 4.253147e-50 | 2.390831e-47 |
MsG0180003320.01 | MsG0480018433.01 | 0.813392 | 2.620168e-51 | 1.709023e-48 |
MsG0180003320.01 | MsG0480018438.01 | 0.835475 | 1.642603e-56 | 2.010798e-53 |
MsG0180003320.01 | MsG0480018439.01 | 0.812615 | 3.878101e-51 | 2.477312e-48 |
MsG0180003320.01 | MsG0480018521.01 | 0.826259 | 2.993035e-54 | 2.792628e-51 |
MsG0180003320.01 | MsG0480018522.01 | 0.821173 | 4.648596e-53 | 3.754208e-50 |
MsG0180003320.01 | MsG0480018559.01 | 0.829885 | 4.006554e-55 | 4.154806e-52 |
MsG0180003320.01 | MsG0480018617.01 | 0.809528 | 1.809385e-50 | 1.064902e-47 |
MsG0180003320.01 | MsG0480018621.01 | 0.805603 | 1.232807e-49 | 6.549674e-47 |
MsG0180003320.01 | MsG0480018622.01 | 0.810523 | 1.105158e-50 | 6.676574e-48 |
MsG0180003320.01 | MsG0480018625.01 | 0.808068 | 3.714366e-50 | 2.103171e-47 |
MsG0180003320.01 | MsG0480018658.01 | -0.813454 | 2.538708e-51 | 1.658716e-48 |
MsG0180003320.01 | MsG0480018692.01 | 0.801237 | 9.897667e-49 | 4.702965e-46 |
MsG0180003320.01 | MsG0480019024.01 | 0.862570 | 4.616437e-64 | 1.358107e-60 |
MsG0180003320.01 | MsG0480019146.01 | 0.844964 | 5.456784e-59 | 8.956903e-56 |
MsG0180003320.01 | MsG0480019171.01 | 0.821620 | 3.665047e-53 | 2.996854e-50 |
MsG0180003320.01 | MsG0480019322.01 | 0.821411 | 4.096475e-53 | 3.330156e-50 |
MsG0180003320.01 | MsG0480019346.01 | 0.816130 | 6.479645e-52 | 4.552854e-49 |
MsG0180003320.01 | MsG0480019348.01 | 0.832583 | 8.701419e-56 | 9.768137e-53 |
MsG0180003320.01 | MsG0480019666.01 | 0.802820 | 4.680204e-49 | 2.315125e-46 |
MsG0180003320.01 | MsG0480019817.01 | 0.820136 | 8.044028e-53 | 6.312428e-50 |
MsG0180003320.01 | MsG0480019842.01 | 0.811599 | 6.458712e-51 | 4.014828e-48 |
MsG0180003320.01 | MsG0480020118.01 | 0.848803 | 4.856105e-60 | 9.017938e-57 |
MsG0180003320.01 | MsG0480020229.01 | -0.816268 | 6.036274e-52 | 4.257540e-49 |
MsG0180003320.01 | MsG0480020285.01 | 0.847673 | 9.964855e-60 | 1.784655e-56 |
MsG0180003320.01 | MsG0480020473.01 | -0.807698 | 4.451353e-50 | 2.496086e-47 |
MsG0180003320.01 | MsG0480020754.01 | 0.809820 | 1.566479e-50 | 9.290958e-48 |
MsG0180003320.01 | MsG0480020797.01 | 0.804802 | 1.813359e-49 | 9.438546e-47 |
MsG0180003320.01 | MsG0480020810.01 | 0.829845 | 4.097890e-55 | 4.244968e-52 |
MsG0180003320.01 | MsG0480020898.01 | 0.806973 | 6.340425e-50 | 3.489102e-47 |
MsG0180003320.01 | MsG0480020904.01 | 0.889449 | 2.397418e-73 | 1.935022e-69 |
MsG0180003320.01 | MsG0480021091.01 | 0.851209 | 1.030192e-60 | 2.069759e-57 |
MsG0180003320.01 | MsG0480021129.01 | 0.815177 | 1.056423e-51 | 7.231119e-49 |
MsG0180003320.01 | MsG0480021133.01 | 0.838388 | 2.961519e-57 | 3.960582e-54 |
MsG0180003320.01 | MsG0480021227.01 | 0.817102 | 3.924142e-52 | 2.831526e-49 |
MsG0180003320.01 | MsG0480021231.01 | 0.803422 | 3.513160e-49 | 1.764735e-46 |
MsG0180003320.01 | MsG0480021234.01 | 0.802813 | 4.693934e-49 | 2.321579e-46 |
MsG0180003320.01 | MsG0480021236.01 | 0.825650 | 4.176453e-54 | 3.829784e-51 |
MsG0180003320.01 | MsG0480021360.01 | 0.808238 | 3.416910e-50 | 1.943517e-47 |
MsG0180003320.01 | MsG0480021394.01 | 0.805609 | 1.229202e-49 | 6.531642e-47 |
MsG0180003320.01 | MsG0480021597.01 | -0.809933 | 1.481218e-50 | 8.811331e-48 |
MsG0180003320.01 | MsG0480021691.01 | -0.804501 | 2.095452e-49 | 1.082134e-46 |
MsG0180003320.01 | MsG0480022055.01 | 0.839544 | 1.487526e-57 | 2.060712e-54 |
MsG0180003320.01 | MsG0480022288.01 | 0.806600 | 7.601697e-50 | 4.143120e-47 |
MsG0180003320.01 | MsG0480022411.01 | -0.826495 | 2.628749e-54 | 2.469217e-51 |
MsG0180003320.01 | MsG0480022458.01 | -0.816373 | 5.718184e-52 | 4.044625e-49 |
MsG0180003320.01 | MsG0480022833.01 | 0.813734 | 2.203441e-51 | 1.450547e-48 |
MsG0180003320.01 | MsG0480022840.01 | 0.806994 | 6.276399e-50 | 3.455665e-47 |
MsG0180003320.01 | MsG0480022886.01 | 0.821094 | 4.845642e-53 | 3.904942e-50 |
MsG0180003320.01 | MsG0480023432.01 | 0.848614 | 5.479451e-60 | 1.011245e-56 |
MsG0180003320.01 | MsG0480023466.01 | -0.801849 | 7.414423e-49 | 3.577969e-46 |
MsG0180003320.01 | MsG0480023993.01 | -0.802401 | 5.709765e-49 | 2.794379e-46 |
MsG0180003320.01 | MsG0580024086.01 | 0.803100 | 4.095495e-49 | 2.040179e-46 |
MsG0180003320.01 | MsG0580024087.01 | 0.846139 | 2.620879e-59 | 4.467186e-56 |
MsG0180003320.01 | MsG0580024138.01 | 0.807582 | 4.710866e-50 | 2.633557e-47 |
MsG0180003320.01 | MsG0580024202.01 | 0.810229 | 1.278827e-50 | 7.666021e-48 |
MsG0180003320.01 | MsG0580024207.01 | 0.821088 | 4.861330e-53 | 3.916901e-50 |
MsG0180003320.01 | MsG0580024386.01 | -0.803816 | 2.910040e-49 | 1.476677e-46 |
MsG0180003320.01 | MsG0580024464.01 | 0.819519 | 1.112801e-52 | 8.582883e-50 |
MsG0180003320.01 | MsG0580024535.01 | 0.805649 | 1.205784e-49 | 6.413888e-47 |
MsG0180003320.01 | MsG0580024649.01 | 0.800651 | 1.303810e-48 | 6.103961e-46 |
MsG0180003320.01 | MsG0580025007.01 | 0.838659 | 2.521595e-57 | 3.400332e-54 |
MsG0180003320.01 | MsG0580025023.01 | 0.820726 | 5.889783e-53 | 4.697522e-50 |
MsG0180003320.01 | MsG0580025024.01 | 0.831085 | 2.038321e-55 | 2.188941e-52 |
MsG0180003320.01 | MsG0580025259.01 | -0.802446 | 5.590035e-49 | 2.738841e-46 |
MsG0180003320.01 | MsG0580025392.01 | -0.800279 | 1.552574e-48 | 7.200285e-46 |
MsG0180003320.01 | MsG0580025432.01 | 0.849986 | 2.272673e-60 | 4.386362e-57 |
MsG0180003320.01 | MsG0580025586.01 | 0.801586 | 8.397756e-49 | 4.025291e-46 |
MsG0180003320.01 | MsG0580025589.01 | -0.800880 | 1.170843e-48 | 5.513548e-46 |
MsG0180003320.01 | MsG0580025606.01 | 0.806093 | 9.721952e-50 | 5.230724e-47 |
MsG0180003320.01 | MsG0580025633.01 | 0.803419 | 3.518076e-49 | 1.767050e-46 |
MsG0180003320.01 | MsG0580025960.01 | 0.821795 | 3.339700e-53 | 2.744568e-50 |
MsG0180003320.01 | MsG0580025965.01 | 0.809263 | 2.063271e-50 | 1.205773e-47 |
MsG0180003320.01 | MsG0580026180.01 | 0.830072 | 3.607676e-55 | 3.760712e-52 |
MsG0180003320.01 | MsG0580026211.01 | -0.812144 | 4.914461e-51 | 3.100070e-48 |
MsG0180003320.01 | MsG0580026311.01 | 0.800649 | 1.305183e-48 | 6.109999e-46 |
MsG0180003320.01 | MsG0580026521.01 | 0.893304 | 7.123275e-75 | 6.748325e-71 |
MsG0180003320.01 | MsG0580027098.01 | -0.805642 | 1.209746e-49 | 6.433852e-47 |
MsG0180003320.01 | MsG0580027099.01 | -0.802837 | 4.641708e-49 | 2.297117e-46 |
MsG0180003320.01 | MsG0580027183.01 | -0.814191 | 1.747057e-51 | 1.164417e-48 |
MsG0180003320.01 | MsG0580027254.01 | -0.807687 | 4.474703e-50 | 2.508527e-47 |
MsG0180003320.01 | MsG0580027751.01 | 0.845506 | 3.892953e-59 | 6.501460e-56 |
MsG0180003320.01 | MsG0580027752.01 | 0.847660 | 1.004911e-59 | 1.798988e-56 |
MsG0180003320.01 | MsG0580027753.01 | 0.835611 | 1.517247e-56 | 1.864956e-53 |
MsG0180003320.01 | MsG0580027777.01 | 0.815256 | 1.014661e-51 | 6.960380e-49 |
MsG0180003320.01 | MsG0580028490.01 | 0.800714 | 1.265994e-48 | 5.936022e-46 |
MsG0180003320.01 | MsG0580028577.01 | 0.821304 | 4.335957e-53 | 3.514379e-50 |
MsG0180003320.01 | MsG0580028985.01 | 0.811818 | 5.788950e-51 | 3.619478e-48 |
MsG0180003320.01 | MsG0580029291.01 | 0.805265 | 1.450893e-49 | 7.641650e-47 |
MsG0180003320.01 | MsG0580029359.01 | 0.859996 | 2.810249e-63 | 7.566694e-60 |
MsG0180003320.01 | MsG0580029445.01 | 0.800205 | 1.607731e-48 | 7.441708e-46 |
MsG0180003320.01 | MsG0580029676.01 | 0.828282 | 9.806585e-55 | 9.702775e-52 |
MsG0180003320.01 | MsG0580029937.01 | 0.851359 | 9.342655e-61 | 1.886416e-57 |
MsG0180003320.01 | MsG0580029938.01 | 0.831442 | 1.665024e-55 | 1.807114e-52 |
MsG0180003320.01 | MsG0680030379.01 | 0.801508 | 8.711533e-49 | 4.167700e-46 |
MsG0180003320.01 | MsG0680030613.01 | 0.827513 | 1.501134e-54 | 1.452304e-51 |
MsG0180003320.01 | MsG0680030644.01 | -0.803672 | 3.116810e-49 | 1.575672e-46 |
MsG0180003320.01 | MsG0680030754.01 | -0.809353 | 1.973219e-50 | 1.155985e-47 |
MsG0180003320.01 | MsG0680030960.01 | 0.806096 | 9.710637e-50 | 5.224855e-47 |
MsG0180003320.01 | MsG0680031009.01 | 0.800379 | 1.481848e-48 | 6.889744e-46 |
MsG0180003320.01 | MsG0680031139.01 | 0.803734 | 3.025769e-49 | 1.532157e-46 |
MsG0180003320.01 | MsG0680031200.01 | 0.892121 | 2.124870e-74 | 1.915588e-70 |
MsG0180003320.01 | MsG0680031204.01 | -0.805818 | 1.110688e-49 | 5.934070e-47 |
MsG0180003320.01 | MsG0680031474.01 | 0.801613 | 8.290599e-49 | 3.976686e-46 |
MsG0180003320.01 | MsG0680032026.01 | 0.801151 | 1.030716e-48 | 4.887027e-46 |
MsG0180003320.01 | MsG0680032045.01 | 0.820491 | 6.668757e-53 | 5.284420e-50 |
MsG0180003320.01 | MsG0680032932.01 | 0.869487 | 2.985766e-66 | 1.122711e-62 |
MsG0180003320.01 | MsG0680033014.01 | 0.803478 | 3.420504e-49 | 1.720650e-46 |
MsG0180003320.01 | MsG0680033367.01 | 0.816685 | 4.869648e-52 | 3.473792e-49 |
MsG0180003320.01 | MsG0680033368.01 | 0.822922 | 1.827691e-53 | 1.550993e-50 |
MsG0180003320.01 | MsG0680033617.01 | 0.809057 | 2.284237e-50 | 1.327550e-47 |
MsG0180003320.01 | MsG0680033901.01 | -0.802879 | 4.550217e-49 | 2.254089e-46 |
MsG0180003320.01 | MsG0680034238.01 | 0.878775 | 2.137158e-69 | 1.129922e-65 |
MsG0180003320.01 | MsG0680034254.01 | 0.844133 | 9.127450e-59 | 1.459597e-55 |
MsG0180003320.01 | MsG0680034310.01 | 0.812318 | 4.502225e-51 | 2.853467e-48 |
MsG0180003320.01 | MsG0680034312.01 | 0.814540 | 1.462802e-51 | 9.842374e-49 |
MsG0180003320.01 | MsG0680034354.01 | 0.854825 | 9.506552e-62 | 2.150695e-58 |
MsG0180003320.01 | MsG0680034356.01 | 0.843350 | 1.479448e-58 | 2.308457e-55 |
MsG0180003320.01 | MsG0680034391.01 | 0.813539 | 2.431954e-51 | 1.592585e-48 |
MsG0180003320.01 | MsG0680034418.01 | 0.840165 | 1.025023e-57 | 1.447893e-54 |
MsG0180003320.01 | MsG0680034728.01 | 0.839709 | 1.347563e-57 | 1.876391e-54 |
MsG0180003320.01 | MsG0680034969.01 | 0.809444 | 1.886440e-50 | 1.107756e-47 |
MsG0180003320.01 | MsG0680034974.01 | 0.860164 | 2.498975e-63 | 6.768020e-60 |
MsG0180003320.01 | MsG0680034978.01 | 0.825501 | 4.529733e-54 | 4.136054e-51 |
MsG0180003320.01 | MsG0780035930.01 | 0.863691 | 2.077781e-64 | 6.355374e-61 |
MsG0180003320.01 | MsG0780035932.01 | 0.806798 | 6.906796e-50 | 3.783491e-47 |
MsG0180003320.01 | MsG0780036199.01 | 0.830746 | 2.468758e-55 | 2.624711e-52 |
MsG0180003320.01 | MsG0780036208.01 | 0.801306 | 9.583777e-49 | 4.561658e-46 |
MsG0180003320.01 | MsG0780036259.01 | 0.805010 | 1.640738e-49 | 8.585396e-47 |
MsG0180003320.01 | MsG0780036376.01 | 0.832167 | 1.103000e-55 | 1.222911e-52 |
MsG0180003320.01 | MsG0780036427.01 | 0.820087 | 8.255414e-53 | 6.469543e-50 |
MsG0180003320.01 | MsG0780036472.01 | 0.866859 | 2.095021e-65 | 7.167027e-62 |
MsG0180003320.01 | MsG0780036583.01 | -0.800730 | 1.256427e-48 | 5.893769e-46 |
MsG0180003320.01 | MsG0780036649.01 | 0.838586 | 2.633205e-57 | 3.543097e-54 |
MsG0180003320.01 | MsG0780036835.01 | 0.845679 | 3.494371e-59 | 5.869212e-56 |
MsG0180003320.01 | MsG0780036839.01 | 0.852957 | 3.282906e-61 | 6.978592e-58 |
MsG0180003320.01 | MsG0780036960.01 | 0.807411 | 5.120669e-50 | 2.850238e-47 |
MsG0180003320.01 | MsG0780037436.01 | -0.808171 | 3.531445e-50 | 2.005156e-47 |
MsG0180003320.01 | MsG0780037998.01 | 0.816341 | 5.814313e-52 | 4.109153e-49 |
MsG0180003320.01 | MsG0780038307.01 | 0.804624 | 1.975418e-49 | 1.023400e-46 |
MsG0180003320.01 | MsG0780038313.01 | 0.854312 | 1.338158e-61 | 2.976110e-58 |
MsG0180003320.01 | MsG0780038519.01 | 0.832132 | 1.125618e-55 | 1.246694e-52 |
MsG0180003320.01 | MsG0780038657.01 | 0.886609 | 2.947587e-72 | 2.120253e-68 |
MsG0180003320.01 | MsG0780038756.01 | -0.810321 | 1.221860e-50 | 7.342254e-48 |
MsG0180003320.01 | MsG0780039237.01 | 0.808767 | 2.634615e-50 | 1.519344e-47 |
MsG0180003320.01 | MsG0780039373.01 | 0.867115 | 1.735889e-65 | 5.990624e-62 |
MsG0180003320.01 | MsG0780039449.01 | -0.806878 | 6.641679e-50 | 3.645874e-47 |
MsG0180003320.01 | MsG0780039619.01 | 0.804757 | 1.853596e-49 | 9.636595e-47 |
MsG0180003320.01 | MsG0780039686.01 | 0.814468 | 1.517472e-51 | 1.019087e-48 |
MsG0180003320.01 | MsG0780039855.01 | 0.814074 | 1.853866e-51 | 1.231740e-48 |
MsG0180003320.01 | MsG0780039883.01 | 0.818129 | 2.302615e-52 | 1.708963e-49 |
MsG0180003320.01 | MsG0780039902.01 | -0.807091 | 5.985810e-50 | 3.304016e-47 |
MsG0180003320.01 | MsG0780039912.01 | 0.824825 | 6.542403e-54 | 5.860349e-51 |
MsG0180003320.01 | MsG0780039979.01 | 0.808328 | 3.269442e-50 | 1.864104e-47 |
MsG0180003320.01 | MsG0780040158.01 | -0.803957 | 2.720739e-49 | 1.385631e-46 |
MsG0180003320.01 | MsG0780040497.01 | 0.867825 | 1.028644e-65 | 3.640408e-62 |
MsG0180003320.01 | MsG0780040498.01 | 0.849230 | 3.695792e-60 | 6.960608e-57 |
MsG0180003320.01 | MsG0780040560.01 | 0.807653 | 4.549538e-50 | 2.548183e-47 |
MsG0180003320.01 | MsG0780040615.01 | 0.808717 | 2.700587e-50 | 1.555306e-47 |
MsG0180003320.01 | MsG0780040670.01 | 0.823090 | 1.669821e-53 | 1.423809e-50 |
MsG0180003320.01 | MsG0780040684.01 | -0.823269 | 1.516946e-53 | 1.299881e-50 |
MsG0180003320.01 | MsG0780040716.01 | 0.855488 | 6.101874e-62 | 1.411089e-58 |
MsG0180003320.01 | MsG0780040719.01 | 0.838067 | 3.584588e-57 | 4.747029e-54 |
MsG0180003320.01 | MsG0780040783.01 | 0.820380 | 7.073059e-53 | 5.587919e-50 |
MsG0180003320.01 | MsG0780040784.01 | 0.828275 | 9.839885e-55 | 9.734036e-52 |
MsG0180003320.01 | MsG0780040808.01 | 0.819036 | 1.433804e-52 | 1.091191e-49 |
MsG0180003320.01 | MsG0780040847.01 | 0.801633 | 8.210804e-49 | 3.940522e-46 |
MsG0180003320.01 | MsG0780041004.01 | -0.810117 | 1.352139e-50 | 8.082251e-48 |
MsG0180003320.01 | MsG0780041036.01 | 0.808137 | 3.590598e-50 | 2.036830e-47 |
MsG0180003320.01 | MsG0780041246.01 | 0.811392 | 7.164861e-51 | 4.429662e-48 |
MsG0180003320.01 | MsG0780041248.01 | 0.853515 | 2.271274e-61 | 4.920366e-58 |
MsG0180003320.01 | MsG0780041289.01 | -0.802463 | 5.542950e-49 | 2.716982e-46 |
MsG0180003320.01 | MsG0780041385.01 | -0.802761 | 4.811306e-49 | 2.376372e-46 |
MsG0180003320.01 | MsG0780041447.01 | 0.814770 | 1.301093e-51 | 8.808079e-49 |
MsG0180003320.01 | MsG0780041500.01 | 0.828571 | 8.349419e-55 | 8.331274e-52 |
MsG0180003320.01 | MsG0780041778.01 | -0.808332 | 3.262518e-50 | 1.860337e-47 |
MsG0180003320.01 | MsG0880042043.01 | -0.805799 | 1.120975e-49 | 5.986002e-47 |
MsG0180003320.01 | MsG0880042256.01 | -0.805546 | 1.266742e-49 | 6.720295e-47 |
MsG0180003320.01 | MsG0880042261.01 | 0.812722 | 3.675164e-51 | 2.354304e-48 |
MsG0180003320.01 | MsG0880042262.01 | 0.803813 | 2.914571e-49 | 1.478828e-46 |
MsG0180003320.01 | MsG0880042369.01 | 0.814247 | 1.697890e-51 | 1.133395e-48 |
MsG0180003320.01 | MsG0880042415.01 | -0.821056 | 4.944956e-53 | 3.980945e-50 |
MsG0180003320.01 | MsG0880042591.01 | 0.801590 | 8.379360e-49 | 4.016977e-46 |
MsG0180003320.01 | MsG0880042633.01 | 0.817655 | 2.947002e-52 | 2.158935e-49 |
MsG0180003320.01 | MsG0880042640.01 | 0.821848 | 3.245975e-53 | 2.671640e-50 |
MsG0180003320.01 | MsG0880042641.01 | 0.803986 | 2.682972e-49 | 1.367447e-46 |
MsG0180003320.01 | MsG0880042642.01 | 0.818276 | 2.133165e-52 | 1.589546e-49 |
MsG0180003320.01 | MsG0880042728.01 | 0.810297 | 1.236026e-50 | 7.422717e-48 |
MsG0180003320.01 | MsG0880043107.01 | -0.819829 | 9.454543e-53 | 7.355502e-50 |
MsG0180003320.01 | MsG0880043217.01 | 0.821118 | 4.784233e-53 | 3.857896e-50 |
MsG0180003320.01 | MsG0880043244.01 | 0.813240 | 2.829607e-51 | 1.837754e-48 |
MsG0180003320.01 | MsG0880043245.01 | 0.828347 | 9.455208e-55 | 9.372878e-52 |
MsG0180003320.01 | MsG0880043550.01 | 0.810472 | 1.133602e-50 | 6.839339e-48 |
MsG0180003320.01 | MsG0880043688.01 | 0.843638 | 1.238684e-58 | 1.950495e-55 |
MsG0180003320.01 | MsG0880043882.01 | 0.803361 | 3.616355e-49 | 1.813612e-46 |
MsG0180003320.01 | MsG0880043998.01 | 0.806436 | 8.234190e-50 | 4.469035e-47 |
MsG0180003320.01 | MsG0880044001.01 | 0.801013 | 1.100031e-48 | 5.197668e-46 |
MsG0180003320.01 | MsG0880044028.01 | 0.802211 | 6.247724e-49 | 3.042730e-46 |
MsG0180003320.01 | MsG0880044558.01 | -0.810009 | 1.426492e-50 | 8.502958e-48 |
MsG0180003320.01 | MsG0880044626.01 | -0.810017 | 1.420571e-50 | 8.469573e-48 |
MsG0180003320.01 | MsG0880044712.01 | 0.873869 | 1.052349e-67 | 4.637939e-64 |
MsG0180003320.01 | MsG0880044834.01 | -0.800321 | 1.522259e-48 | 7.067289e-46 |
MsG0180003320.01 | MsG0880045130.01 | 0.815408 | 9.387223e-52 | 6.466671e-49 |
MsG0180003320.01 | MsG0880045423.01 | -0.814091 | 1.838181e-51 | 1.221811e-48 |
MsG0180003320.01 | MsG0880045801.01 | 0.854161 | 1.480097e-61 | 3.276109e-58 |
MsG0180003320.01 | MsG0880045854.01 | 0.821465 | 3.979198e-53 | 3.239664e-50 |
MsG0180003320.01 | MsG0880045991.01 | 0.810332 | 1.215162e-50 | 7.304150e-48 |
MsG0180003320.01 | MsG0880046037.01 | 0.805345 | 1.396079e-49 | 7.368352e-47 |
MsG0180003320.01 | MsG0880046071.01 | 0.809636 | 1.716026e-50 | 1.012915e-47 |
MsG0180003320.01 | MsG0880046212.01 | 0.811775 | 5.914823e-51 | 3.694000e-48 |
MsG0180003320.01 | MsG0880046273.01 | 0.816183 | 6.305921e-52 | 4.437291e-49 |
MsG0180003320.01 | MsG0880046324.01 | -0.804802 | 1.813138e-49 | 9.437439e-47 |
MsG0180003320.01 | MsG0880046434.01 | 0.803058 | 4.177504e-49 | 2.078848e-46 |
MsG0180003320.01 | MsG0880046829.01 | 0.846027 | 2.810721e-59 | 4.774376e-56 |
MsG0180003320.01 | MsG0880046870.01 | 0.837350 | 5.473265e-57 | 7.089976e-54 |
MsG0180003320.01 | MsG0880046946.01 | 0.853503 | 2.289599e-61 | 4.958151e-58 |
MsG0180003320.01 | MsG0880047057.01 | 0.810932 | 9.012180e-51 | 5.505073e-48 |
MsG0180003320.01 | MsG0880047312.01 | 0.809934 | 1.479962e-50 | 8.804296e-48 |
MsG0180003320.01 | MsG0880047383.01 | 0.821718 | 3.479251e-53 | 2.852999e-50 |
MsG0180003320.01 | MsG0880047450.01 | 0.820567 | 6.407097e-53 | 5.087609e-50 |
MsG0180003320.01 | MsG0880047727.01 | -0.800774 | 1.230654e-48 | 5.779171e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003320.01.T01 | MTR_1g058540 | 96.923 | 130 | 4 | 0 | 1 | 130 | 38 | 167 | 1.09e-87 | 254 |
MsG0180003320.01.T01 | MTR_1g058560 | 83.846 | 130 | 21 | 0 | 1 | 130 | 37 | 166 | 2.91e-63 | 192 |
MsG0180003320.01.T01 | MTR_1g058570 | 80.769 | 130 | 25 | 0 | 1 | 130 | 36 | 165 | 8.49e-63 | 191 |
MsG0180003320.01.T01 | MTR_2g086740 | 62.500 | 128 | 48 | 0 | 1 | 128 | 62 | 189 | 2.04e-44 | 145 |
MsG0180003320.01.T01 | MTR_7g011090 | 53.846 | 130 | 60 | 0 | 1 | 130 | 28 | 157 | 5.14e-40 | 133 |
MsG0180003320.01.T01 | MTR_4g081880 | 41.538 | 130 | 76 | 0 | 1 | 130 | 29 | 158 | 7.01e-32 | 112 |
MsG0180003320.01.T01 | MTR_5g041900 | 47.692 | 130 | 68 | 0 | 1 | 130 | 28 | 157 | 1.09e-30 | 109 |
MsG0180003320.01.T01 | MTR_2g086740 | 60.674 | 89 | 35 | 0 | 1 | 89 | 62 | 150 | 1.15e-27 | 100 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003320.01.T01 | AT2G36100 | 62.992 | 127 | 47 | 0 | 2 | 128 | 49 | 175 | 9.13e-54 | 168 |
MsG0180003320.01.T01 | AT3G11550 | 69.643 | 112 | 34 | 0 | 19 | 130 | 64 | 175 | 5.82e-50 | 159 |
MsG0180003320.01.T01 | AT5G06200 | 67.857 | 112 | 36 | 0 | 19 | 130 | 62 | 173 | 3.85e-46 | 149 |
MsG0180003320.01.T01 | AT2G27370 | 60.630 | 127 | 50 | 0 | 2 | 128 | 63 | 189 | 3.11e-45 | 147 |
MsG0180003320.01.T01 | AT5G15290 | 45.385 | 130 | 71 | 0 | 1 | 130 | 28 | 157 | 5.61e-39 | 130 |
MsG0180003320.01.T01 | AT1G14160 | 39.189 | 148 | 86 | 1 | 1 | 144 | 51 | 198 | 1.22e-30 | 109 |
MsG0180003320.01.T01 | AT1G03700 | 33.594 | 128 | 76 | 2 | 3 | 130 | 11 | 129 | 3.23e-14 | 66.2 |
MsG0180003320.01.T01 | AT3G06390 | 27.820 | 133 | 91 | 2 | 1 | 128 | 37 | 169 | 6.56e-12 | 60.8 |
MsG0180003320.01.T01 | AT4G03540 | 32.743 | 113 | 67 | 2 | 18 | 130 | 26 | 129 | 2.10e-11 | 58.9 |
Find 30 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGCCATTTGCAACCAATT+TGG | 0.187527 | 1:-60598491 | MsG0180003320.01.T01:CDS |
ATGATGGTTACTATGGAAAA+TGG | 0.329026 | 1:+60599148 | None:intergenic |
AGCAGCTGCCATGGTTTACT+TGG | 0.359773 | 1:-60598543 | MsG0180003320.01.T01:CDS |
ATCATTCGCCCTCATGCATC+TGG | 0.377835 | 1:-60599130 | MsG0180003320.01.T01:CDS |
GGCATTTGTGGGTGGCTACC+TGG | 0.401958 | 1:-60599182 | MsG0180003320.01.T01:CDS |
AGGGCGAATGATGGTTACTA+TGG | 0.422728 | 1:+60599141 | None:intergenic |
CATAACTAGCTTCAAATTGA+AGG | 0.426220 | 1:+60599454 | None:intergenic |
ATGGCAATCAAGACTCAAAC+TGG | 0.433393 | 1:-60598514 | MsG0180003320.01.T01:CDS |
ATCTCCAAATTGGTTGCAAA+TGG | 0.439108 | 1:+60598487 | None:intergenic |
TGTTATTGCAATGGCATTTG+TGG | 0.446696 | 1:-60599194 | MsG0180003320.01.T01:CDS |
GTTATTGCAATGGCATTTGT+GGG | 0.458726 | 1:-60599193 | MsG0180003320.01.T01:CDS |
TGGTTACTATGGAAAATGGT+AGG | 0.486275 | 1:+60599152 | None:intergenic |
TGGTGCTTCAGCAGCTGCCA+TGG | 0.489524 | 1:-60598552 | MsG0180003320.01.T01:CDS |
TGAAGGAACTGAGTGAAGAA+AGG | 0.493692 | 1:+60599471 | None:intergenic |
TGCAGCAAGAGAAGCTGCTA+TGG | 0.527344 | 1:+60599527 | None:intergenic |
GGTTACTATGGAAAATGGTA+GGG | 0.561081 | 1:+60599153 | None:intergenic |
AGATGCATGAGGGCGAATGA+TGG | 0.573876 | 1:+60599132 | None:intergenic |
TGCTGAAGCACCACTAGCAG+TGG | 0.592321 | 1:+60598562 | None:intergenic |
AATCTGATCACTAGTTGCCA+TGG | 0.596028 | 1:+60599497 | None:intergenic |
ATTGCAATGGCATTTGTGGG+TGG | 0.596308 | 1:-60599190 | MsG0180003320.01.T01:CDS |
ATGACATTAGCCACTGCTAG+TGG | 0.602800 | 1:-60598572 | MsG0180003320.01.T01:CDS |
GCCCTCATGCATCTGGACCA+AGG | 0.605836 | 1:-60599123 | MsG0180003320.01.T01:CDS |
ATGGTTTACTTGGCACACAA+TGG | 0.608727 | 1:-60598533 | MsG0180003320.01.T01:CDS |
GCGATGATGAGGAAAAGCCT+TGG | 0.613791 | 1:+60599106 | None:intergenic |
GCCTTGGTCCAGATGCATGA+GGG | 0.641599 | 1:+60599122 | None:intergenic |
TTACTGTGTCTGCGATGATG+AGG | 0.667059 | 1:+60599095 | None:intergenic |
AGCCTTGGTCCAGATGCATG+AGG | 0.674067 | 1:+60599121 | None:intergenic |
TCTTGCTGCAACTATCACCA+TGG | 0.694318 | 1:-60599514 | MsG0180003320.01.T01:CDS |
AAAATGGTAGGGATAAGACC+AGG | 0.708096 | 1:+60599164 | None:intergenic |
ATTGTGTGCCAAGTAAACCA+TGG | 0.791669 | 1:+60598535 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATCAATAAAGCAA+TGG | + | Chr1:60599077-60599096 | None:intergenic | 15.0% |
!! | ACTCTAATTAAGAATTAATT+AGG | + | Chr1:60598928-60598947 | None:intergenic | 15.0% |
!! | TAAGAATTAATTAGGAAATT+AGG | + | Chr1:60598920-60598939 | None:intergenic | 15.0% |
!! | TCATGTAAAAAAAATTTGAA+GGG | + | Chr1:60598971-60598990 | None:intergenic | 15.0% |
!! | TTCATGTAAAAAAAATTTGA+AGG | + | Chr1:60598972-60598991 | None:intergenic | 15.0% |
!!! | AAATTATTTGTTTAAGTTAG+AGG | + | Chr1:60598589-60598608 | None:intergenic | 15.0% |
!!! | AGAAACTATTATTTTAAAAG+TGG | - | Chr1:60599300-60599319 | MsG0180003320.01.T01:intron | 15.0% |
!! | AATGTTTATTGTAAATATGC+AGG | - | Chr1:60598760-60598779 | MsG0180003320.01.T01:intron | 20.0% |
!! | ATGAACATATATATTCTAGT+AGG | - | Chr1:60598987-60599006 | MsG0180003320.01.T01:intron | 20.0% |
!!! | GTTAAGTACTTTTAAAAAAC+TGG | - | Chr1:60599271-60599290 | MsG0180003320.01.T01:intron | 20.0% |
! | AATGAGGAAATGAACTATTA+AGG | - | Chr1:60599186-60599205 | MsG0180003320.01.T01:CDS | 25.0% |
! | GGTCATTTGAAAATAAATAG+AGG | + | Chr1:60599056-60599075 | None:intergenic | 25.0% |
!!! | ATGGATTTTGTTCTAAGATT+AGG | - | Chr1:60598430-60598449 | MsG0180003320.01.T01:CDS | 25.0% |
ATGATGGTTACTATGGAAAA+TGG | + | Chr1:60598837-60598856 | None:intergenic | 30.0% | |
ATTACTCCTTGTGTTTCTTT+CGG | - | Chr1:60599030-60599049 | MsG0180003320.01.T01:intron | 30.0% | |
GAAGATAAATTGCTACAATG+AGG | - | Chr1:60599170-60599189 | MsG0180003320.01.T01:CDS | 30.0% | |
TAATGTCATAAACACCTACA+CGG | + | Chr1:60599399-60599418 | None:intergenic | 30.0% | |
TGGACTAAATAAATACACCT+AGG | + | Chr1:60598634-60598653 | None:intergenic | 30.0% | |
! | AATACACCTAGGTTTTACAA+TGG | + | Chr1:60598623-60598642 | None:intergenic | 30.0% |
! | CATAACTAGCTTCAAATTGA+AGG | + | Chr1:60598531-60598550 | None:intergenic | 30.0% |
! | GTGTAGTTCAAATTTTGTGT+TGG | + | Chr1:60598654-60598673 | None:intergenic | 30.0% |
!!! | CAGGTTTTTTGTTATTGCAA+TGG | - | Chr1:60598779-60598798 | MsG0180003320.01.T01:intron | 30.0% |
ATCTCCAAATTGGTTGCAAA+TGG | + | Chr1:60599498-60599517 | None:intergenic | 35.0% | |
GAGCACAAAAATCTCCAAAT+TGG | + | Chr1:60599508-60599527 | None:intergenic | 35.0% | |
GAGGTTTAAATGTGACATAC+TGG | + | Chr1:60598570-60598589 | None:intergenic | 35.0% | |
GGTTACTATGGAAAATGGTA+GGG | + | Chr1:60598832-60598851 | None:intergenic | 35.0% | |
GTTATTGCAATGGCATTTGT+GGG | - | Chr1:60598789-60598808 | MsG0180003320.01.T01:intron | 35.0% | |
TGGTTACTATGGAAAATGGT+AGG | + | Chr1:60598833-60598852 | None:intergenic | 35.0% | |
TGTTATTGCAATGGCATTTG+TGG | - | Chr1:60598788-60598807 | MsG0180003320.01.T01:intron | 35.0% | |
! | AAACTCAAACTTTTCCGTGT+AGG | - | Chr1:60599382-60599401 | MsG0180003320.01.T01:intron | 35.0% |
! | AGATTTTTGTGCTCAACAAG+TGG | - | Chr1:60599514-60599533 | MsG0180003320.01.T01:CDS | 35.0% |
!! | TGTGTCATGTTTTATTGCTG+TGG | - | Chr1:60599543-60599562 | MsG0180003320.01.T01:CDS | 35.0% |
AAAATGGTAGGGATAAGACC+AGG | + | Chr1:60598821-60598840 | None:intergenic | 40.0% | |
AATCTGATCACTAGTTGCCA+TGG | + | Chr1:60598488-60598507 | None:intergenic | 40.0% | |
ATGGCAATCAAGACTCAAAC+TGG | - | Chr1:60599468-60599487 | MsG0180003320.01.T01:CDS | 40.0% | |
ATGGTTTACTTGGCACACAA+TGG | - | Chr1:60599449-60599468 | MsG0180003320.01.T01:CDS | 40.0% | |
ATTGTGTGCCAAGTAAACCA+TGG | + | Chr1:60599450-60599469 | None:intergenic | 40.0% | |
TGAAGGAACTGAGTGAAGAA+AGG | + | Chr1:60598514-60598533 | None:intergenic | 40.0% | |
! | ACACCTAGGTTTTACAATGG+AGG | + | Chr1:60598620-60598639 | None:intergenic | 40.0% |
! | CACCTAGGTTTTACAATGGA+GGG | + | Chr1:60598619-60598638 | None:intergenic | 40.0% |
! | CTTGCCATTTGCAACCAATT+TGG | - | Chr1:60599491-60599510 | MsG0180003320.01.T01:CDS | 40.0% |
AGGGCGAATGATGGTTACTA+TGG | + | Chr1:60598844-60598863 | None:intergenic | 45.0% | |
ATGACATTAGCCACTGCTAG+TGG | - | Chr1:60599410-60599429 | MsG0180003320.01.T01:intron | 45.0% | |
ATTGCAATGGCATTTGTGGG+TGG | - | Chr1:60598792-60598811 | MsG0180003320.01.T01:intron | 45.0% | |
CTCCCTCCATTGTAAAACCT+AGG | - | Chr1:60598614-60598633 | MsG0180003320.01.T01:intron | 45.0% | |
TAGAGGCCGAAAGAAACACA+AGG | + | Chr1:60599039-60599058 | None:intergenic | 45.0% | |
TCTTGCTGCAACTATCACCA+TGG | - | Chr1:60598468-60598487 | MsG0180003320.01.T01:CDS | 45.0% | |
TTACTGTGTCTGCGATGATG+AGG | + | Chr1:60598890-60598909 | None:intergenic | 45.0% | |
AGATGCATGAGGGCGAATGA+TGG | + | Chr1:60598853-60598872 | None:intergenic | 50.0% | |
AGCAGCTGCCATGGTTTACT+TGG | - | Chr1:60599439-60599458 | MsG0180003320.01.T01:CDS | 50.0% | |
ATCATTCGCCCTCATGCATC+TGG | - | Chr1:60598852-60598871 | MsG0180003320.01.T01:intron | 50.0% | |
GCGATGATGAGGAAAAGCCT+TGG | + | Chr1:60598879-60598898 | None:intergenic | 50.0% | |
TGCAGCAAGAGAAGCTGCTA+TGG | + | Chr1:60598458-60598477 | None:intergenic | 50.0% | |
AGCCTTGGTCCAGATGCATG+AGG | + | Chr1:60598864-60598883 | None:intergenic | 55.0% | |
GCCTTGGTCCAGATGCATGA+GGG | + | Chr1:60598863-60598882 | None:intergenic | 55.0% | |
! | TGCTGAAGCACCACTAGCAG+TGG | + | Chr1:60599423-60599442 | None:intergenic | 55.0% |
GCCCTCATGCATCTGGACCA+AGG | - | Chr1:60598859-60598878 | MsG0180003320.01.T01:intron | 60.0% | |
GGCATTTGTGGGTGGCTACC+TGG | - | Chr1:60598800-60598819 | MsG0180003320.01.T01:intron | 60.0% | |
TGGTGCTTCAGCAGCTGCCA+TGG | - | Chr1:60599430-60599449 | MsG0180003320.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 60598430 | 60599574 | 60598430 | ID=MsG0180003320.01;Name=MsG0180003320.01 |
Chr1 | mRNA | 60598430 | 60599574 | 60598430 | ID=MsG0180003320.01.T01;Parent=MsG0180003320.01;Name=MsG0180003320.01.T01;_AED=0.16;_eAED=0.21;_QI=0|0|0|1|1|1|3|0|144 |
Chr1 | exon | 60599435 | 60599574 | 60599435 | ID=MsG0180003320.01.T01:exon:49398;Parent=MsG0180003320.01.T01 |
Chr1 | exon | 60599099 | 60599222 | 60599099 | ID=MsG0180003320.01.T01:exon:49397;Parent=MsG0180003320.01.T01 |
Chr1 | exon | 60598430 | 60598600 | 60598430 | ID=MsG0180003320.01.T01:exon:49396;Parent=MsG0180003320.01.T01 |
Chr1 | CDS | 60599435 | 60599574 | 60599435 | ID=MsG0180003320.01.T01:cds;Parent=MsG0180003320.01.T01 |
Chr1 | CDS | 60599099 | 60599222 | 60599099 | ID=MsG0180003320.01.T01:cds;Parent=MsG0180003320.01.T01 |
Chr1 | CDS | 60598430 | 60598600 | 60598430 | ID=MsG0180003320.01.T01:cds;Parent=MsG0180003320.01.T01 |
Gene Sequence |
Protein sequence |