Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021277.01.T01 | XP_003606955.1 | 97 | 300 | 9 | 0 | 2 | 301 | 4 | 303 | 0 | 591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021277.01.T01 | G7JHE2 | 97.000 | 300 | 9 | 0 | 2 | 301 | 4 | 303 | 0.0 | 591 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004652.01 | MsG0480021277.01 | 0.815354 | 9.648873e-52 | 6.637191e-49 |
| MsG0180005569.01 | MsG0480021277.01 | 0.804849 | 1.772614e-49 | 9.237815e-47 |
| MsG0280011369.01 | MsG0480021277.01 | 0.848958 | 4.397408e-60 | 8.208073e-57 |
| MsG0380012818.01 | MsG0480021277.01 | 0.801168 | 1.022634e-48 | 4.850619e-46 |
| MsG0380014807.01 | MsG0480021277.01 | 0.815741 | 7.913984e-52 | 5.502244e-49 |
| MsG0480021277.01 | MsG0480023706.01 | 0.801280 | 9.698245e-49 | 4.613267e-46 |
| MsG0480021277.01 | MsG0780040978.01 | 0.821368 | 4.189773e-53 | 3.401986e-50 |
| MsG0480021277.01 | MsG0780040990.01 | 0.814850 | 1.248638e-51 | 8.471796e-49 |
| MsG0380017079.01 | MsG0480021277.01 | 0.819678 | 1.023788e-52 | 7.931098e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021277.01.T01 | MTR_4g070570 | 97.000 | 300 | 9 | 0 | 2 | 301 | 4 | 303 | 0.0 | 591 |
| MsG0480021277.01.T01 | MTR_4g070590 | 58.333 | 300 | 113 | 6 | 8 | 301 | 8 | 301 | 2.13e-110 | 322 |
| MsG0480021277.01.T01 | MTR_3g116950 | 55.814 | 301 | 119 | 7 | 6 | 301 | 5 | 296 | 6.03e-102 | 300 |
| MsG0480021277.01.T01 | MTR_3g116920 | 56.333 | 300 | 121 | 6 | 6 | 301 | 5 | 298 | 2.40e-99 | 294 |
| MsG0480021277.01.T01 | MTR_4g070540 | 43.253 | 289 | 154 | 4 | 16 | 301 | 15 | 296 | 7.57e-63 | 201 |
| MsG0480021277.01.T01 | MTR_4g070530 | 41.176 | 289 | 160 | 4 | 16 | 301 | 15 | 296 | 1.06e-59 | 192 |
| MsG0480021277.01.T01 | MTR_8g074530 | 34.576 | 295 | 182 | 6 | 10 | 300 | 17 | 304 | 1.37e-46 | 159 |
| MsG0480021277.01.T01 | MTR_5g023550 | 31.525 | 295 | 185 | 8 | 11 | 301 | 3 | 284 | 4.70e-39 | 139 |
| MsG0480021277.01.T01 | MTR_8g074510 | 29.655 | 290 | 195 | 5 | 13 | 300 | 5 | 287 | 1.02e-38 | 138 |
| MsG0480021277.01.T01 | MTR_8g074450 | 32.646 | 291 | 185 | 6 | 13 | 299 | 5 | 288 | 1.09e-38 | 138 |
| MsG0480021277.01.T01 | MTR_5g023290 | 30.573 | 314 | 198 | 9 | 1 | 300 | 1 | 308 | 8.09e-38 | 136 |
| MsG0480021277.01.T01 | MTR_5g023390 | 30.847 | 295 | 187 | 8 | 9 | 299 | 2 | 283 | 1.74e-37 | 135 |
| MsG0480021277.01.T01 | MTR_5g023600 | 31.081 | 296 | 185 | 9 | 9 | 299 | 2 | 283 | 6.24e-37 | 133 |
| MsG0480021277.01.T01 | MTR_5g023370 | 30.847 | 295 | 187 | 8 | 9 | 299 | 2 | 283 | 8.38e-37 | 133 |
| MsG0480021277.01.T01 | MTR_8g074420 | 30.479 | 292 | 192 | 6 | 13 | 300 | 5 | 289 | 8.46e-37 | 133 |
| MsG0480021277.01.T01 | MTR_5g023340 | 30.612 | 294 | 189 | 6 | 9 | 299 | 2 | 283 | 1.07e-36 | 132 |
| MsG0480021277.01.T01 | MTR_5g023350 | 29.831 | 295 | 190 | 8 | 9 | 299 | 2 | 283 | 1.72e-35 | 129 |
| MsG0480021277.01.T01 | MTR_5g023520 | 30.872 | 298 | 184 | 11 | 11 | 301 | 3 | 285 | 1.74e-35 | 129 |
| MsG0480021277.01.T01 | MTR_5g023530 | 30.743 | 296 | 190 | 8 | 7 | 299 | 1 | 284 | 2.44e-35 | 129 |
| MsG0480021277.01.T01 | MTR_5g023470 | 30.743 | 296 | 190 | 8 | 7 | 299 | 1 | 284 | 1.76e-34 | 127 |
| MsG0480021277.01.T01 | MTR_5g023320 | 29.966 | 297 | 185 | 10 | 9 | 299 | 2 | 281 | 3.09e-34 | 126 |
| MsG0480021277.01.T01 | MTR_5g023580 | 29.592 | 294 | 192 | 7 | 10 | 298 | 3 | 286 | 5.78e-34 | 127 |
| MsG0480021277.01.T01 | MTR_8g074380 | 31.475 | 305 | 174 | 9 | 4 | 299 | 3 | 281 | 7.85e-27 | 107 |
| MsG0480021277.01.T01 | MTR_3g116940 | 43.307 | 127 | 46 | 1 | 1 | 127 | 1 | 101 | 4.20e-24 | 95.9 |
| MsG0480021277.01.T01 | MTR_5g023650 | 30.519 | 308 | 189 | 7 | 9 | 301 | 8 | 305 | 6.96e-23 | 96.3 |
| MsG0480021277.01.T01 | MTR_1g037820 | 32.900 | 231 | 126 | 8 | 72 | 301 | 24 | 226 | 8.71e-21 | 89.4 |
| MsG0480021277.01.T01 | MTR_5g023460 | 31.633 | 196 | 117 | 6 | 105 | 299 | 11 | 190 | 5.66e-19 | 83.2 |
| MsG0480021277.01.T01 | MTR_3g115150 | 26.144 | 306 | 197 | 11 | 9 | 299 | 23 | 314 | 5.62e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021277.01.T01 | AT2G17080 | 40.625 | 288 | 137 | 9 | 16 | 301 | 8 | 263 | 5.64e-51 | 169 |
| MsG0480021277.01.T01 | AT2G17070 | 38.889 | 288 | 142 | 8 | 16 | 301 | 8 | 263 | 7.79e-51 | 169 |
| MsG0480021277.01.T01 | AT4G35210 | 39.576 | 283 | 131 | 9 | 16 | 298 | 8 | 250 | 1.36e-48 | 162 |
| MsG0480021277.01.T01 | AT4G35200 | 39.223 | 283 | 135 | 9 | 16 | 298 | 8 | 253 | 2.01e-46 | 157 |
| MsG0480021277.01.T01 | AT4G35690 | 34.783 | 299 | 163 | 11 | 13 | 301 | 8 | 284 | 3.73e-42 | 147 |
| MsG0480021277.01.T01 | AT4G35710 | 31.313 | 297 | 173 | 9 | 14 | 301 | 9 | 283 | 5.45e-29 | 112 |
| MsG0480021277.01.T01 | AT2G17680 | 29.642 | 307 | 168 | 11 | 16 | 300 | 11 | 291 | 8.38e-27 | 107 |
| MsG0480021277.01.T01 | AT4G35680 | 29.618 | 314 | 196 | 11 | 4 | 301 | 6 | 310 | 2.26e-20 | 89.7 |
| MsG0480021277.01.T01 | AT4G35720 | 28.308 | 325 | 196 | 11 | 7 | 300 | 6 | 324 | 2.31e-20 | 89.7 |
| MsG0480021277.01.T01 | AT1G76210 | 29.555 | 247 | 143 | 6 | 57 | 301 | 9 | 226 | 1.96e-19 | 85.5 |
| MsG0480021277.01.T01 | AT3G51400 | 29.412 | 204 | 130 | 4 | 100 | 300 | 82 | 274 | 8.61e-18 | 82.0 |
| MsG0480021277.01.T01 | AT4G35660 | 27.815 | 302 | 182 | 7 | 9 | 299 | 10 | 286 | 6.97e-15 | 73.9 |
| MsG0480021277.01.T01 | AT1G20520 | 26.506 | 249 | 152 | 6 | 54 | 300 | 6 | 225 | 9.20e-13 | 67.0 |
Find 49 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAACCAATTGGAAAATT+TGG | 0.112535 | 4:-56200823 | MsG0480021277.01.T01:CDS |
| TGAGAAAATTCTTGGCTTCT+AGG | 0.199154 | 4:-56201208 | MsG0480021277.01.T01:CDS |
| ATTTATACAACTAGTGATTA+AGG | 0.290293 | 4:+56200718 | None:intergenic |
| AATCGAAACCAAGTAATTAT+TGG | 0.313179 | 4:-56200989 | MsG0480021277.01.T01:CDS |
| GGCCGAGGTGAGAAAATTCT+TGG | 0.322610 | 4:-56201216 | MsG0480021277.01.T01:CDS |
| ACATGATTGCGTCGAAAGTT+TGG | 0.329591 | 4:-56201432 | MsG0480021277.01.T01:CDS |
| TGATGTGATGTTGGACTAAT+AGG | 0.335874 | 4:+56201596 | None:intergenic |
| ATTATCTCCTAGCAACAATA+AGG | 0.373881 | 4:-56201111 | MsG0480021277.01.T01:CDS |
| TCAAATTCTCCAAAGCTTTG+AGG | 0.381031 | 4:+56201165 | None:intergenic |
| CAATCATTTGCAGAACCAAT+TGG | 0.396017 | 4:-56200832 | MsG0480021277.01.T01:CDS |
| GAAAGCAATCCTCAAAGCTT+TGG | 0.399242 | 4:-56201174 | MsG0480021277.01.T01:CDS |
| CAAAGCTTTGGAGAATTTGA+AGG | 0.400637 | 4:-56201162 | MsG0480021277.01.T01:CDS |
| ACCAAGGACCAATAATTACT+TGG | 0.401947 | 4:+56200981 | None:intergenic |
| TCCACGCACGTCAAGAGAAA+TGG | 0.417810 | 4:-56201379 | MsG0480021277.01.T01:CDS |
| ACCAAGTAATTATTGGTCCT+TGG | 0.430617 | 4:-56200982 | MsG0480021277.01.T01:CDS |
| TTTAATCTTTATATCTGGAC+CGG | 0.469654 | 4:-56201015 | MsG0480021277.01.T01:CDS |
| ATCAACTCTTCATCGTTGTT+CGG | 0.473180 | 4:-56201482 | MsG0480021277.01.T01:CDS |
| TTGCTACAGAACACACATCT+AGG | 0.484586 | 4:+56201324 | None:intergenic |
| GTCTGTTGTTCAAGGGTTTG+TGG | 0.488801 | 4:-56200799 | MsG0480021277.01.T01:CDS |
| AGTGATCACTCTTTCAATGT+TGG | 0.496374 | 4:-56201045 | MsG0480021277.01.T01:CDS |
| ACAAGGACTTGTTGAGTAAG+AGG | 0.502400 | 4:+56201401 | None:intergenic |
| ATTTGGAGTCTGTTGTTCAA+GGG | 0.504312 | 4:-56200806 | MsG0480021277.01.T01:CDS |
| CGAAATGGAGGTGACGGCCG+AGG | 0.520093 | 4:-56201231 | MsG0480021277.01.T01:CDS |
| AAAATTCTTGGCTTCTAGGA+AGG | 0.521847 | 4:-56201204 | MsG0480021277.01.T01:CDS |
| TCTCTTGACGTGCGTGGACA+AGG | 0.524756 | 4:+56201384 | None:intergenic |
| TCATGATCCTTATTGTTGCT+AGG | 0.526232 | 4:+56201104 | None:intergenic |
| TTGAAGGCTAATGTGAAGAA+AGG | 0.526883 | 4:-56201146 | MsG0480021277.01.T01:CDS |
| GCTAATGTGAAGAAAGGTAA+AGG | 0.528831 | 4:-56201140 | MsG0480021277.01.T01:CDS |
| AATTTGGAGTCTGTTGTTCA+AGG | 0.538470 | 4:-56200807 | MsG0480021277.01.T01:CDS |
| TCCATTTCTCTTGACGTGCG+TGG | 0.539554 | 4:+56201378 | None:intergenic |
| CATTGTAGAATGAGAGGGTG+TGG | 0.553149 | 4:+56201542 | None:intergenic |
| CGAGGTTGGTGATGTGATGT+TGG | 0.563264 | 4:+56201587 | None:intergenic |
| AGGAGGCGAAATGGAGGTGA+CGG | 0.564930 | 4:-56201237 | MsG0480021277.01.T01:CDS |
| ATGAGAGGGTGTGGTTTCGA+TGG | 0.575082 | 4:+56201551 | None:intergenic |
| GAAGAGTTGATTGCGTCGAA+AGG | 0.582245 | 4:+56201494 | None:intergenic |
| GCTTATGATGCAGAGCAAGA+AGG | 0.582612 | 4:-56200952 | MsG0480021277.01.T01:CDS |
| TCTACAATGCAATCAACACT+TGG | 0.582703 | 4:-56201528 | MsG0480021277.01.T01:CDS |
| AGATGTGTGTTCTGTAGCAA+AGG | 0.585332 | 4:-56201321 | MsG0480021277.01.T01:CDS |
| CATCATAAGCTTTGAAACCA+AGG | 0.589484 | 4:+56200965 | None:intergenic |
| AGTGATTAAGGACATTGAGA+AGG | 0.590750 | 4:+56200730 | None:intergenic |
| GTGATTAAGGACATTGAGAA+GGG | 0.597371 | 4:+56200731 | None:intergenic |
| TTACTTGGTTTCGATTGCGC+CGG | 0.602841 | 4:+56200996 | None:intergenic |
| GGTTAGTTTGTTAAGAGACG+TGG | 0.607951 | 4:-56201069 | MsG0480021277.01.T01:CDS |
| TGATTGCATTGTAGAATGAG+AGG | 0.610266 | 4:+56201536 | None:intergenic |
| ATCATGTAAAGCTTGTAGAT+CGG | 0.622289 | 4:+56201448 | None:intergenic |
| GGATTCTCTAATTCATACGA+AGG | 0.644514 | 4:-56201300 | MsG0480021277.01.T01:CDS |
| TGATGTTGGACTAATAGGAA+TGG | 0.654192 | 4:+56201601 | None:intergenic |
| AGATCCGTCTAAAAGCTCAT+CGG | 0.663380 | 4:+56201355 | None:intergenic |
| GATTGCATTGTAGAATGAGA+GGG | 0.668472 | 4:+56201537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCACTTTTAATCTTTATATC+TGG | - | Chr4:56201319-56201338 | MsG0480021277.01.T01:CDS | 20.0% |
| ! | AATCGAAACCAAGTAATTAT+TGG | - | Chr4:56201350-56201369 | MsG0480021277.01.T01:CDS | 25.0% |
| ! | TTTAATCTTTATATCTGGAC+CGG | - | Chr4:56201324-56201343 | MsG0480021277.01.T01:CDS | 25.0% |
| ATCATGTAAAGCTTGTAGAT+CGG | + | Chr4:56200894-56200913 | None:intergenic | 30.0% | |
| ATTATCTCCTAGCAACAATA+AGG | - | Chr4:56201228-56201247 | MsG0480021277.01.T01:CDS | 30.0% | |
| ACCAAGGACCAATAATTACT+TGG | + | Chr4:56201361-56201380 | None:intergenic | 35.0% | |
| ACCAAGTAATTATTGGTCCT+TGG | - | Chr4:56201357-56201376 | MsG0480021277.01.T01:CDS | 35.0% | |
| AGTGATCACTCTTTCAATGT+TGG | - | Chr4:56201294-56201313 | MsG0480021277.01.T01:CDS | 35.0% | |
| AGTGATTAAGGACATTGAGA+AGG | + | Chr4:56201612-56201631 | None:intergenic | 35.0% | |
| ATCAACTCTTCATCGTTGTT+CGG | - | Chr4:56200857-56200876 | MsG0480021277.01.T01:CDS | 35.0% | |
| ATTATGCGAAGAAAAAGAGG+AGG | - | Chr4:56201085-56201104 | MsG0480021277.01.T01:CDS | 35.0% | |
| CAATCATTTGCAGAACCAAT+TGG | - | Chr4:56201507-56201526 | MsG0480021277.01.T01:CDS | 35.0% | |
| GATTGCATTGTAGAATGAGA+GGG | + | Chr4:56200805-56200824 | None:intergenic | 35.0% | |
| GCAGAACCAATTGGAAAATT+TGG | - | Chr4:56201516-56201535 | MsG0480021277.01.T01:CDS | 35.0% | |
| GCTAATGTGAAGAAAGGTAA+AGG | - | Chr4:56201199-56201218 | MsG0480021277.01.T01:CDS | 35.0% | |
| GGATCATGAAAAAGTGACTT+TGG | - | Chr4:56201249-56201268 | MsG0480021277.01.T01:CDS | 35.0% | |
| GGATTCTCTAATTCATACGA+AGG | - | Chr4:56201039-56201058 | MsG0480021277.01.T01:CDS | 35.0% | |
| GTGATTAAGGACATTGAGAA+GGG | + | Chr4:56201611-56201630 | None:intergenic | 35.0% | |
| TCAAATTCTCCAAAGCTTTG+AGG | + | Chr4:56201177-56201196 | None:intergenic | 35.0% | |
| TCATGATCCTTATTGTTGCT+AGG | + | Chr4:56201238-56201257 | None:intergenic | 35.0% | |
| TCGATTATGCGAAGAAAAAG+AGG | - | Chr4:56201082-56201101 | MsG0480021277.01.T01:CDS | 35.0% | |
| TCTACAATGCAATCAACACT+TGG | - | Chr4:56200811-56200830 | MsG0480021277.01.T01:CDS | 35.0% | |
| TGAGAAAATTCTTGGCTTCT+AGG | - | Chr4:56201131-56201150 | MsG0480021277.01.T01:CDS | 35.0% | |
| TGATGTGATGTTGGACTAAT+AGG | + | Chr4:56200746-56200765 | None:intergenic | 35.0% | |
| TGATGTTGGACTAATAGGAA+TGG | + | Chr4:56200741-56200760 | None:intergenic | 35.0% | |
| TGATTGCATTGTAGAATGAG+AGG | + | Chr4:56200806-56200825 | None:intergenic | 35.0% | |
| TTGAAGGCTAATGTGAAGAA+AGG | - | Chr4:56201193-56201212 | MsG0480021277.01.T01:CDS | 35.0% | |
| ! | AAAATTCTTGGCTTCTAGGA+AGG | - | Chr4:56201135-56201154 | MsG0480021277.01.T01:CDS | 35.0% |
| ! | AATTTGGAGTCTGTTGTTCA+AGG | - | Chr4:56201532-56201551 | MsG0480021277.01.T01:CDS | 35.0% |
| ! | AGCTTTTAGACGGATCTTTA+AGG | - | Chr4:56200990-56201009 | MsG0480021277.01.T01:CDS | 35.0% |
| ! | ATTTGGAGTCTGTTGTTCAA+GGG | - | Chr4:56201533-56201552 | MsG0480021277.01.T01:CDS | 35.0% |
| ! | CAGACTCCAAATTTTCCAAT+TGG | + | Chr4:56201525-56201544 | None:intergenic | 35.0% |
| !! | CAAAGCTTTGGAGAATTTGA+AGG | - | Chr4:56201177-56201196 | MsG0480021277.01.T01:CDS | 35.0% |
| !! | CATCATAAGCTTTGAAACCA+AGG | + | Chr4:56201377-56201396 | None:intergenic | 35.0% |
| AAGAAAAAGAGGAGGCGAAA+TGG | - | Chr4:56201093-56201112 | MsG0480021277.01.T01:CDS | 40.0% | |
| ACATGATTGCGTCGAAAGTT+TGG | - | Chr4:56200907-56200926 | MsG0480021277.01.T01:CDS | 40.0% | |
| AGATCCGTCTAAAAGCTCAT+CGG | + | Chr4:56200987-56201006 | None:intergenic | 40.0% | |
| AGATGTGTGTTCTGTAGCAA+AGG | - | Chr4:56201018-56201037 | MsG0480021277.01.T01:CDS | 40.0% | |
| GAAAGCAATCCTCAAAGCTT+TGG | - | Chr4:56201165-56201184 | MsG0480021277.01.T01:CDS | 40.0% | |
| TTGCTACAGAACACACATCT+AGG | + | Chr4:56201018-56201037 | None:intergenic | 40.0% | |
| ! | AGCCAAGAATTTTCTCACCT+CGG | + | Chr4:56201128-56201147 | None:intergenic | 40.0% |
| !! | ACAAGGACTTGTTGAGTAAG+AGG | + | Chr4:56200941-56200960 | None:intergenic | 40.0% |
| !! | GGTTAGTTTGTTAAGAGACG+TGG | - | Chr4:56201270-56201289 | MsG0480021277.01.T01:CDS | 40.0% |
| AAAAAGAGGAGGCGAAATGG+AGG | - | Chr4:56201096-56201115 | MsG0480021277.01.T01:CDS | 45.0% | |
| CATTGTAGAATGAGAGGGTG+TGG | + | Chr4:56200800-56200819 | None:intergenic | 45.0% | |
| GCTTATGATGCAGAGCAAGA+AGG | - | Chr4:56201387-56201406 | MsG0480021277.01.T01:CDS | 45.0% | |
| GTCTGTTGTTCAAGGGTTTG+TGG | - | Chr4:56201540-56201559 | MsG0480021277.01.T01:CDS | 45.0% | |
| TTACTTGGTTTCGATTGCGC+CGG | + | Chr4:56201346-56201365 | None:intergenic | 45.0% | |
| ! | GAAGAGTTGATTGCGTCGAA+AGG | + | Chr4:56200848-56200867 | None:intergenic | 45.0% |
| ! | TGGACCGATGAGCTTTTAGA+CGG | - | Chr4:56200980-56200999 | MsG0480021277.01.T01:CDS | 45.0% |
| GGCCGAGGTGAGAAAATTCT+TGG | - | Chr4:56201123-56201142 | MsG0480021277.01.T01:CDS | 50.0% | |
| TCCACGCACGTCAAGAGAAA+TGG | - | Chr4:56200960-56200979 | MsG0480021277.01.T01:CDS | 50.0% | |
| TCCATTTCTCTTGACGTGCG+TGG | + | Chr4:56200964-56200983 | None:intergenic | 50.0% | |
| ! | ATGAGAGGGTGTGGTTTCGA+TGG | + | Chr4:56200791-56200810 | None:intergenic | 50.0% |
| !! | CGAGGTTGGTGATGTGATGT+TGG | + | Chr4:56200755-56200774 | None:intergenic | 50.0% |
| AGGAGGCGAAATGGAGGTGA+CGG | - | Chr4:56201102-56201121 | MsG0480021277.01.T01:CDS | 55.0% | |
| TCTCTTGACGTGCGTGGACA+AGG | + | Chr4:56200958-56200977 | None:intergenic | 55.0% | |
| !! | GATGGCAAGCTTTTCGAGCG+AGG | + | Chr4:56200773-56200792 | None:intergenic | 55.0% |
| !! | GCAAGCTTTTCGAGCGAGGT+TGG | + | Chr4:56200769-56200788 | None:intergenic | 55.0% |
| ! | CGAAATGGAGGTGACGGCCG+AGG | - | Chr4:56201108-56201127 | MsG0480021277.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 56200728 | 56201633 | 56200728 | ID=MsG0480021277.01;Name=MsG0480021277.01 |
| Chr4 | mRNA | 56200728 | 56201633 | 56200728 | ID=MsG0480021277.01.T01;Parent=MsG0480021277.01;Name=MsG0480021277.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|301 |
| Chr4 | exon | 56200728 | 56201633 | 56200728 | ID=MsG0480021277.01.T01:exon:1251;Parent=MsG0480021277.01.T01 |
| Chr4 | CDS | 56200728 | 56201633 | 56200728 | ID=MsG0480021277.01.T01:cds;Parent=MsG0480021277.01.T01 |
| Gene Sequence |
| Protein sequence |
