Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005569.01.T01 | XP_013469776.2 | 98.448 | 451 | 5 | 1 | 1 | 451 | 1 | 449 | 0 | 916 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005569.01.T01 | A0A1P8B590 | 43.724 | 478 | 153 | 18 | 1 | 456 | 60 | 443 | 2.95E-103 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005569.01.T01 | A0A396JXE9 | 98.448 | 451 | 5 | 1 | 1 | 451 | 1 | 449 | 0.0 | 916 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005569.01 | MsG0280009866.01 | 0.817738 | 2.821825e-52 | 2.072046e-49 |
| MsG0180005569.01 | MsG0280011369.01 | 0.800086 | 1.699317e-48 | 7.842286e-46 |
| MsG0180005569.01 | MsG0380011846.01 | 0.819797 | 9.615735e-53 | 7.474689e-50 |
| MsG0180005569.01 | MsG0380012818.01 | 0.826638 | 2.431085e-54 | 2.292908e-51 |
| MsG0180005569.01 | MsG0380013041.01 | 0.803650 | 3.150594e-49 | 1.591848e-46 |
| MsG0180005569.01 | MsG0380016091.01 | 0.802217 | 6.230883e-49 | 3.034983e-46 |
| MsG0180005569.01 | MsG0380016225.01 | 0.821200 | 4.581576e-53 | 3.703053e-50 |
| MsG0180005569.01 | MsG0480021277.01 | 0.804849 | 1.772614e-49 | 9.237815e-47 |
| MsG0180005569.01 | MsG0480023653.01 | 0.827607 | 1.425152e-54 | 1.382474e-51 |
| MsG0180005569.01 | MsG0480023706.01 | 0.834239 | 3.363282e-56 | 3.967412e-53 |
| MsG0180005569.01 | MsG0580024158.01 | 0.805384 | 1.369829e-49 | 7.236973e-47 |
| MsG0180005569.01 | MsG0680031823.01 | 0.805423 | 1.344808e-49 | 7.111866e-47 |
| MsG0180005569.01 | MsG0780038393.01 | 0.812605 | 3.897070e-51 | 2.488728e-48 |
| MsG0180005569.01 | MsG0780038647.01 | 0.808296 | 3.320906e-50 | 1.891784e-47 |
| MsG0180005569.01 | MsG0780040118.01 | 0.807449 | 5.026601e-50 | 2.800634e-47 |
| MsG0180005569.01 | MsG0780040978.01 | 0.802639 | 5.098512e-49 | 2.510307e-46 |
| MsG0180005569.01 | MsG0780040990.01 | 0.812589 | 3.929947e-51 | 2.508689e-48 |
| MsG0180005569.01 | MsG0880042930.01 | 0.810409 | 1.169174e-50 | 7.042041e-48 |
| MsG0180005569.01 | MsG0880043684.01 | 0.821378 | 4.169315e-53 | 3.386248e-50 |
| MsG0180005569.01 | MsG0880043714.01 | 0.809452 | 1.879256e-50 | 1.103753e-47 |
| MsG0180005569.01 | MsG0880045612.01 | 0.800711 | 1.267642e-48 | 5.943308e-46 |
| MsG0180005569.01 | MsG0880045963.01 | 0.810200 | 1.297286e-50 | 7.770896e-48 |
| MsG0180005569.01 | MsG0880046445.01 | 0.801198 | 1.008227e-48 | 4.785846e-46 |
| MsG0180005569.01 | MsG0880046904.01 | 0.805259 | 1.455362e-49 | 7.663863e-47 |
| MsG0180005569.01 | MsG0880046906.01 | 0.817282 | 3.575109e-52 | 2.592385e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005569.01.T01 | MTR_1g103070 | 98.226 | 451 | 6 | 1 | 1 | 451 | 1 | 449 | 0.0 | 914 |
| MsG0180005569.01.T01 | MTR_1g041430 | 63.948 | 466 | 122 | 11 | 1 | 454 | 1 | 432 | 0.0 | 516 |
| MsG0180005569.01.T01 | MTR_8g102400 | 35.129 | 464 | 211 | 19 | 1 | 422 | 1 | 416 | 1.55e-42 | 157 |
| MsG0180005569.01.T01 | MTR_8g014580 | 38.600 | 443 | 188 | 18 | 1 | 402 | 1 | 400 | 1.96e-42 | 156 |
| MsG0180005569.01.T01 | MTR_4g102840 | 32.704 | 477 | 206 | 14 | 1 | 421 | 1 | 418 | 3.31e-37 | 142 |
| MsG0180005569.01.T01 | MTR_0019s0070 | 35.238 | 315 | 136 | 10 | 135 | 388 | 114 | 421 | 1.16e-32 | 130 |
| MsG0180005569.01.T01 | MTR_7g114870 | 29.974 | 387 | 194 | 12 | 1 | 372 | 1 | 325 | 1.04e-31 | 126 |
| MsG0180005569.01.T01 | MTR_1g101330 | 36.740 | 411 | 179 | 13 | 36 | 383 | 9 | 401 | 8.18e-31 | 124 |
| MsG0180005569.01.T01 | MTR_2g100740 | 30.867 | 392 | 191 | 18 | 1 | 373 | 1 | 331 | 1.36e-25 | 108 |
| MsG0180005569.01.T01 | MTR_8g024540 | 50.649 | 154 | 69 | 3 | 55 | 207 | 50 | 197 | 1.56e-23 | 104 |
| MsG0180005569.01.T01 | MTR_0047s0040 | 30.270 | 370 | 180 | 17 | 45 | 371 | 22 | 356 | 1.07e-22 | 100 |
| MsG0180005569.01.T01 | MTR_7g114700 | 29.658 | 263 | 149 | 10 | 136 | 371 | 133 | 386 | 9.76e-20 | 92.0 |
| MsG0180005569.01.T01 | MTR_3g091560 | 61.404 | 114 | 38 | 3 | 76 | 189 | 56 | 163 | 2.60e-18 | 87.8 |
| MsG0180005569.01.T01 | MTR_1g051810 | 56.311 | 103 | 41 | 1 | 86 | 184 | 49 | 151 | 4.18e-17 | 83.6 |
| MsG0180005569.01.T01 | MTR_4g108140 | 60.000 | 65 | 26 | 0 | 138 | 202 | 99 | 163 | 4.94e-17 | 84.7 |
| MsG0180005569.01.T01 | MTR_4g108140 | 60.000 | 65 | 26 | 0 | 138 | 202 | 100 | 164 | 5.00e-17 | 84.3 |
| MsG0180005569.01.T01 | MTR_4g050480 | 71.698 | 53 | 15 | 0 | 137 | 189 | 95 | 147 | 8.99e-17 | 83.2 |
| MsG0180005569.01.T01 | MTR_8g074730 | 56.923 | 65 | 28 | 0 | 137 | 201 | 70 | 134 | 9.00e-17 | 77.8 |
| MsG0180005569.01.T01 | MTR_4g050480 | 71.698 | 53 | 15 | 0 | 137 | 189 | 96 | 148 | 9.04e-17 | 83.2 |
| MsG0180005569.01.T01 | MTR_1g095740 | 50.685 | 73 | 36 | 0 | 134 | 206 | 137 | 209 | 3.04e-16 | 81.6 |
| MsG0180005569.01.T01 | MTR_1g066800 | 44.318 | 88 | 43 | 1 | 119 | 206 | 103 | 184 | 4.96e-16 | 80.9 |
| MsG0180005569.01.T01 | MTR_6g033415 | 54.701 | 117 | 53 | 0 | 87 | 203 | 56 | 172 | 5.03e-16 | 80.9 |
| MsG0180005569.01.T01 | MTR_1g066800 | 44.318 | 88 | 43 | 1 | 119 | 206 | 108 | 189 | 6.11e-16 | 80.9 |
| MsG0180005569.01.T01 | MTR_3g104570 | 47.619 | 105 | 53 | 1 | 137 | 241 | 90 | 192 | 1.10e-15 | 79.7 |
| MsG0180005569.01.T01 | MTR_1g007920 | 67.925 | 53 | 17 | 0 | 137 | 189 | 121 | 173 | 1.10e-15 | 80.1 |
| MsG0180005569.01.T01 | MTR_1g007920 | 67.925 | 53 | 17 | 0 | 137 | 189 | 96 | 148 | 1.19e-15 | 79.7 |
| MsG0180005569.01.T01 | MTR_7g100790 | 36.538 | 156 | 94 | 3 | 87 | 239 | 58 | 211 | 7.43e-14 | 74.3 |
| MsG0180005569.01.T01 | MTR_2g015370 | 32.331 | 133 | 74 | 2 | 130 | 262 | 55 | 171 | 2.76e-12 | 67.8 |
| MsG0180005569.01.T01 | MTR_5g038620 | 38.144 | 97 | 48 | 1 | 106 | 202 | 99 | 183 | 1.44e-11 | 67.4 |
| MsG0180005569.01.T01 | MTR_1g023760 | 29.375 | 160 | 99 | 3 | 49 | 199 | 31 | 185 | 3.49e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005569.01.T01 | AT4G14750 | 43.478 | 483 | 157 | 18 | 1 | 461 | 60 | 448 | 7.23e-105 | 322 |
| MsG0180005569.01.T01 | AT4G14750 | 43.724 | 478 | 153 | 18 | 1 | 456 | 1 | 384 | 8.27e-105 | 319 |
| MsG0180005569.01.T01 | AT4G14750 | 43.724 | 478 | 153 | 18 | 1 | 456 | 60 | 443 | 3.01e-104 | 320 |
| MsG0180005569.01.T01 | AT3G16490 | 36.019 | 422 | 152 | 17 | 1 | 387 | 1 | 339 | 1.09e-32 | 129 |
| MsG0180005569.01.T01 | AT4G23060 | 33.645 | 321 | 174 | 10 | 138 | 426 | 167 | 480 | 2.55e-29 | 121 |
| MsG0180005569.01.T01 | AT4G29150 | 36.842 | 285 | 146 | 12 | 127 | 401 | 120 | 380 | 4.24e-28 | 116 |
| MsG0180005569.01.T01 | AT4G00820 | 41.250 | 160 | 84 | 2 | 53 | 207 | 47 | 201 | 1.14e-25 | 110 |
| MsG0180005569.01.T01 | AT5G03040 | 36.364 | 209 | 104 | 7 | 1 | 206 | 1 | 183 | 5.08e-24 | 105 |
| MsG0180005569.01.T01 | AT5G03040 | 36.364 | 209 | 104 | 7 | 1 | 206 | 1 | 183 | 5.08e-24 | 105 |
| MsG0180005569.01.T01 | AT5G03040 | 36.364 | 209 | 104 | 7 | 1 | 206 | 1 | 183 | 5.08e-24 | 105 |
| MsG0180005569.01.T01 | AT1G51960 | 33.684 | 285 | 140 | 10 | 137 | 414 | 99 | 341 | 6.61e-24 | 103 |
| MsG0180005569.01.T01 | AT5G62070 | 35.673 | 342 | 182 | 6 | 48 | 371 | 19 | 340 | 6.65e-23 | 101 |
| MsG0180005569.01.T01 | AT1G01110 | 67.606 | 71 | 23 | 0 | 137 | 207 | 120 | 190 | 6.47e-22 | 99.4 |
| MsG0180005569.01.T01 | AT3G49260 | 60.000 | 70 | 28 | 0 | 137 | 206 | 119 | 188 | 1.77e-20 | 94.7 |
| MsG0180005569.01.T01 | AT3G49260 | 60.000 | 70 | 28 | 0 | 137 | 206 | 119 | 188 | 1.79e-20 | 94.7 |
| MsG0180005569.01.T01 | AT3G49260 | 60.000 | 70 | 28 | 0 | 137 | 206 | 119 | 188 | 1.79e-20 | 94.7 |
| MsG0180005569.01.T01 | AT3G49260 | 60.000 | 70 | 28 | 0 | 137 | 206 | 119 | 188 | 1.79e-20 | 94.7 |
| MsG0180005569.01.T01 | AT1G72670 | 31.600 | 250 | 111 | 6 | 1 | 250 | 1 | 190 | 3.50e-20 | 93.2 |
| MsG0180005569.01.T01 | AT3G52290 | 54.783 | 115 | 52 | 0 | 89 | 203 | 59 | 173 | 8.90e-19 | 89.4 |
| MsG0180005569.01.T01 | AT2G26180 | 42.657 | 143 | 67 | 3 | 108 | 250 | 56 | 183 | 2.22e-18 | 87.8 |
| MsG0180005569.01.T01 | AT5G13460 | 30.451 | 266 | 144 | 9 | 137 | 378 | 110 | 358 | 2.62e-18 | 87.8 |
| MsG0180005569.01.T01 | AT5G07240 | 49.689 | 161 | 61 | 4 | 48 | 198 | 16 | 166 | 4.07e-18 | 87.0 |
| MsG0180005569.01.T01 | AT5G07240 | 49.689 | 161 | 61 | 4 | 48 | 198 | 62 | 212 | 5.58e-18 | 87.0 |
| MsG0180005569.01.T01 | AT3G51380 | 53.247 | 77 | 34 | 1 | 125 | 201 | 26 | 100 | 8.68e-17 | 76.6 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 9.13e-17 | 84.0 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 9.13e-17 | 84.0 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 9.13e-17 | 84.0 |
| MsG0180005569.01.T01 | AT3G22190 | 67.857 | 56 | 18 | 0 | 134 | 189 | 84 | 139 | 1.13e-16 | 82.8 |
| MsG0180005569.01.T01 | AT3G22190 | 67.857 | 56 | 18 | 0 | 134 | 189 | 84 | 139 | 1.13e-16 | 82.8 |
| MsG0180005569.01.T01 | AT3G22190 | 67.857 | 56 | 18 | 0 | 134 | 189 | 84 | 139 | 1.13e-16 | 82.8 |
| MsG0180005569.01.T01 | AT3G22190 | 67.857 | 56 | 18 | 0 | 134 | 189 | 84 | 139 | 1.13e-16 | 82.8 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 1.42e-16 | 83.2 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 1.42e-16 | 83.2 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 1.42e-16 | 83.2 |
| MsG0180005569.01.T01 | AT1G14380 | 30.542 | 203 | 95 | 5 | 1 | 202 | 1 | 158 | 1.75e-16 | 82.8 |
| MsG0180005569.01.T01 | AT4G10640 | 35.417 | 144 | 66 | 4 | 50 | 193 | 39 | 155 | 3.90e-16 | 80.9 |
| MsG0180005569.01.T01 | AT1G18840 | 48.611 | 72 | 37 | 0 | 131 | 202 | 102 | 173 | 1.08e-15 | 80.5 |
| MsG0180005569.01.T01 | AT1G18840 | 48.611 | 72 | 37 | 0 | 131 | 202 | 102 | 173 | 1.08e-15 | 80.5 |
| MsG0180005569.01.T01 | AT1G18840 | 48.611 | 72 | 37 | 0 | 131 | 202 | 102 | 173 | 1.08e-15 | 80.5 |
| MsG0180005569.01.T01 | AT1G17480 | 59.016 | 61 | 25 | 0 | 140 | 200 | 96 | 156 | 2.64e-15 | 78.2 |
| MsG0180005569.01.T01 | AT3G59690 | 43.243 | 74 | 42 | 0 | 131 | 204 | 162 | 235 | 5.27e-15 | 78.2 |
| MsG0180005569.01.T01 | AT3G59690 | 43.243 | 74 | 42 | 0 | 131 | 204 | 162 | 235 | 5.27e-15 | 78.2 |
| MsG0180005569.01.T01 | AT1G74690 | 53.846 | 65 | 30 | 0 | 138 | 202 | 113 | 177 | 1.11e-14 | 77.4 |
| MsG0180005569.01.T01 | AT3G49380 | 27.719 | 285 | 142 | 9 | 98 | 371 | 66 | 297 | 2.23e-14 | 75.1 |
| MsG0180005569.01.T01 | AT3G09710 | 47.945 | 73 | 38 | 0 | 134 | 206 | 104 | 176 | 2.38e-14 | 75.9 |
| MsG0180005569.01.T01 | AT3G09710 | 46.667 | 75 | 40 | 0 | 134 | 208 | 104 | 178 | 3.09e-14 | 75.5 |
| MsG0180005569.01.T01 | AT2G43680 | 40.541 | 74 | 44 | 0 | 131 | 204 | 315 | 388 | 1.87e-13 | 73.6 |
| MsG0180005569.01.T01 | AT2G43680 | 40.541 | 74 | 44 | 0 | 131 | 204 | 315 | 388 | 1.87e-13 | 73.6 |
| MsG0180005569.01.T01 | AT2G43680 | 40.541 | 74 | 44 | 0 | 131 | 204 | 315 | 388 | 1.87e-13 | 73.6 |
| MsG0180005569.01.T01 | AT2G43680 | 40.541 | 74 | 44 | 0 | 131 | 204 | 315 | 388 | 1.87e-13 | 73.6 |
| MsG0180005569.01.T01 | AT2G43680 | 40.541 | 74 | 44 | 0 | 131 | 204 | 316 | 389 | 1.88e-13 | 73.6 |
| MsG0180005569.01.T01 | AT2G26410 | 41.379 | 87 | 50 | 1 | 123 | 208 | 132 | 218 | 2.60e-12 | 69.7 |
| MsG0180005569.01.T01 | AT2G26410 | 41.379 | 87 | 50 | 1 | 123 | 208 | 132 | 218 | 2.60e-12 | 69.7 |
| MsG0180005569.01.T01 | AT1G19870 | 35.135 | 111 | 64 | 2 | 136 | 238 | 213 | 323 | 2.74e-12 | 70.1 |
| MsG0180005569.01.T01 | AT1G19870 | 35.135 | 111 | 64 | 2 | 136 | 238 | 30 | 140 | 2.81e-12 | 69.7 |
| MsG0180005569.01.T01 | AT2G02790 | 34.259 | 108 | 63 | 2 | 102 | 202 | 65 | 171 | 4.18e-12 | 69.3 |
| MsG0180005569.01.T01 | AT2G02790 | 34.259 | 108 | 63 | 2 | 102 | 202 | 65 | 171 | 4.24e-12 | 68.9 |
| MsG0180005569.01.T01 | AT2G02790 | 34.259 | 108 | 63 | 2 | 102 | 202 | 65 | 171 | 4.24e-12 | 68.9 |
Find 88 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAATCTGGCCTTTGTTT+TGG | 0.265547 | 1:-93487381 | None:intergenic |
| GAAAATAGATATTCCATAAA+TGG | 0.268629 | 1:+93487078 | MsG0180005569.01.T01:CDS |
| AAATGGCCACTGCATGCTTT+TGG | 0.277361 | 1:-93487165 | None:intergenic |
| CTGACACCATTCGGATCCTT+TGG | 0.278964 | 1:-93486387 | None:intergenic |
| ACTGAGTCGGCGAAGAATTT+CGG | 0.307539 | 1:+93487413 | MsG0180005569.01.T01:CDS |
| AAGAGGATTGGTGAAGTTGC+AGG | 0.322775 | 1:+93486273 | MsG0180005569.01.T01:CDS |
| GCTTAATTGACCATGGATAT+TGG | 0.331995 | 1:-93487512 | None:intergenic |
| TTTGAGGCTGTTGTTGAAAC+AGG | 0.339969 | 1:-93485688 | None:intergenic |
| TACTGAAACAATCCTCAAAA+TGG | 0.341390 | 1:-93487182 | None:intergenic |
| AAGTTGCTTTCAGTACTATA+TGG | 0.354723 | 1:-93485431 | None:intergenic |
| TTCGGAATTATTCAATTCCT+TGG | 0.358169 | 1:-93485767 | None:intergenic |
| TGTCATTGAAGAAGTAATTT+CGG | 0.360028 | 1:-93485785 | None:intergenic |
| CATTTGAACCAGAAGTTAAC+CGG | 0.370042 | 1:-93485930 | None:intergenic |
| TGACACCATTCGGATCCTTT+GGG | 0.371353 | 1:-93486386 | None:intergenic |
| GAAGTTGCAGGCACTGATAA+GGG | 0.372077 | 1:+93486285 | MsG0180005569.01.T01:CDS |
| CCATGGAAAATGACTTGTTC+AGG | 0.374329 | 1:+93486440 | MsG0180005569.01.T01:CDS |
| GATTGCAGCCAGAGGGAGAT+AGG | 0.395111 | 1:+93487738 | MsG0180005569.01.T01:CDS |
| GCTGTGATCCGGTTAACTTC+TGG | 0.398739 | 1:+93485922 | MsG0180005569.01.T01:CDS |
| GTTGTTGAAACAGGAGTAGT+TGG | 0.410248 | 1:-93485679 | None:intergenic |
| GCATTTCTGTGATTTAGATT+AGG | 0.412617 | 1:-93486418 | None:intergenic |
| AGTTGCCTCTCAAATGAATC+TGG | 0.422643 | 1:-93487393 | None:intergenic |
| GCTTTCCTTCTGACACCATT+CGG | 0.437655 | 1:-93486396 | None:intergenic |
| GACATTTGTTCTGCATAAGA+TGG | 0.440761 | 1:-93487282 | None:intergenic |
| CTTTGCATCCTCACTGGCCT+AGG | 0.440875 | 1:-93487453 | None:intergenic |
| CTCAATTCTGTTAAGGCTGA+TGG | 0.443966 | 1:-93487141 | None:intergenic |
| AAGCTGCAGCTGCTGTGATC+CGG | 0.446246 | 1:+93485911 | MsG0180005569.01.T01:CDS |
| TGAAGTTGCAGGCACTGATA+AGG | 0.452871 | 1:+93486284 | MsG0180005569.01.T01:CDS |
| AAGGCATTGCGTGCTTTAAG+AGG | 0.452954 | 1:+93486256 | MsG0180005569.01.T01:CDS |
| ATCCATGTTGTTAGTTTACT+AGG | 0.454299 | 1:+93485523 | MsG0180005569.01.T01:five_prime_UTR |
| TCTGTATTAGCCATGTAACT+TGG | 0.457832 | 1:-93487324 | None:intergenic |
| CGGCGAAGAATTTCGGTTGA+AGG | 0.465707 | 1:+93487420 | MsG0180005569.01.T01:CDS |
| CATTGCTGTGGCTGCTGCTA+CGG | 0.467309 | 1:+93485855 | MsG0180005569.01.T01:CDS |
| CCCTTTGTATCCAAGTTACA+TGG | 0.469065 | 1:+93487314 | MsG0180005569.01.T01:CDS |
| ATTGCGTGCTTTAAGAGGAT+TGG | 0.475160 | 1:+93486261 | MsG0180005569.01.T01:CDS |
| TGTTCTGCATAAGATGGCCT+AGG | 0.475810 | 1:-93487276 | None:intergenic |
| ACTCAGATGTATGCAGGCTT+TGG | 0.478305 | 1:+93486339 | MsG0180005569.01.T01:CDS |
| GTCAATTAAGCTTGACAGAT+CGG | 0.481004 | 1:+93487524 | MsG0180005569.01.T01:CDS |
| GATGGCCTAGGGAAAGCAAA+AGG | 0.483010 | 1:-93487264 | None:intergenic |
| CAACATCAAAATTGTGGAGA+TGG | 0.486318 | 1:+93486984 | MsG0180005569.01.T01:CDS |
| GTTTGTGTGACAGGCAAGAA+AGG | 0.494775 | 1:+93486237 | MsG0180005569.01.T01:intron |
| TGCGGCAGCTGATGCAGCAG+TGG | 0.496678 | 1:+93485879 | MsG0180005569.01.T01:CDS |
| CCTCAAAAGAGAAGAAGAGA+TGG | 0.505393 | 1:+93485704 | MsG0180005569.01.T01:CDS |
| TGGATACAAAGGGTAGTCAT+AGG | 0.508034 | 1:-93487304 | None:intergenic |
| GATGATCTTTGCATCCTCAC+TGG | 0.511217 | 1:-93487459 | None:intergenic |
| ATAGGAAATGGACAGAGGCT+TGG | 0.519420 | 1:+93486957 | MsG0180005569.01.T01:intron |
| CGTAGCAGCAGCCACAGCAA+TGG | 0.524999 | 1:-93485854 | None:intergenic |
| CAAAGATCATCTTCACAAGT+AGG | 0.528514 | 1:+93487471 | MsG0180005569.01.T01:CDS |
| TGGCTAATACAGAATCATCA+AGG | 0.530539 | 1:+93487334 | MsG0180005569.01.T01:CDS |
| GGCACTGATAAGGGGTCACT+TGG | 0.533686 | 1:+93486294 | MsG0180005569.01.T01:CDS |
| GGCAACACTCAGATGTATGC+AGG | 0.534937 | 1:+93486333 | MsG0180005569.01.T01:CDS |
| CCATGTAACTTGGATACAAA+GGG | 0.536026 | 1:-93487314 | None:intergenic |
| TTCAATTCCTTGGAAGCTGT+CGG | 0.542435 | 1:-93485757 | None:intergenic |
| ATGTGTCTTTCGATCTCACT+TGG | 0.543947 | 1:+93485996 | MsG0180005569.01.T01:CDS |
| AGCTACACCGACAGCTTCCA+AGG | 0.545619 | 1:+93485750 | MsG0180005569.01.T01:CDS |
| GATATAGCAGAATAGCATTG+AGG | 0.546216 | 1:-93487219 | None:intergenic |
| GCCATGTAACTTGGATACAA+AGG | 0.552992 | 1:-93487315 | None:intergenic |
| TGTGGCTGCTGCTACGGCTG+CGG | 0.553963 | 1:+93485861 | MsG0180005569.01.T01:CDS |
| TCTGTTAAGGCTGATGGAGC+TGG | 0.555014 | 1:-93487135 | None:intergenic |
| TTGAAGGAAGAAATGTTCCT+AGG | 0.558090 | 1:+93487436 | MsG0180005569.01.T01:CDS |
| GGAAGACAACATCAAAATTG+TGG | 0.562232 | 1:+93486978 | MsG0180005569.01.T01:CDS |
| TCTAAATCACAGAAATGCCA+TGG | 0.567771 | 1:+93486423 | MsG0180005569.01.T01:CDS |
| GGTACTTGAGAGAAAGAGAT+GGG | 0.568012 | 1:+93485544 | MsG0180005569.01.T01:exon |
| ACTCAGTACCTATCTCCCTC+TGG | 0.571519 | 1:-93487746 | None:intergenic |
| ATGGCCTAGGGAAAGCAAAA+GGG | 0.579721 | 1:-93487263 | None:intergenic |
| CATTTGAGAGGCAACTGAGT+CGG | 0.582840 | 1:+93487400 | MsG0180005569.01.T01:CDS |
| GTTCTGCATAAGATGGCCTA+GGG | 0.585806 | 1:-93487275 | None:intergenic |
| CTGTCAAGCTTAATTGACCA+TGG | 0.596255 | 1:-93487519 | None:intergenic |
| TCACTCAAAGACAGCGAGTG+TGG | 0.602764 | 1:+93487552 | MsG0180005569.01.T01:CDS |
| CTCAGAACTACCAATATCCA+TGG | 0.603363 | 1:+93487502 | MsG0180005569.01.T01:CDS |
| AGGTACTTGAGAGAAAGAGA+TGG | 0.605693 | 1:+93485543 | MsG0180005569.01.T01:exon |
| AGGATCCGAATGGTGTCAGA+AGG | 0.606421 | 1:+93486391 | MsG0180005569.01.T01:CDS |
| AAAGGCCAGATTCATTTGAG+AGG | 0.608884 | 1:+93487388 | MsG0180005569.01.T01:CDS |
| AAGCTAGAGCTCGTGCCCAA+AGG | 0.613772 | 1:+93486371 | MsG0180005569.01.T01:CDS |
| CTTCTATTTAGTGTTGCACA+AGG | 0.615759 | 1:-93487774 | None:intergenic |
| CTTGGTGAGAAAACAAGCAA+AGG | 0.620679 | 1:+93486312 | MsG0180005569.01.T01:CDS |
| CACAAAGTGCACCAAAACAA+AGG | 0.621093 | 1:+93487370 | MsG0180005569.01.T01:CDS |
| TACTCACATCATATGCAACA+AGG | 0.625138 | 1:-93487617 | None:intergenic |
| ACTCACATCATATGCAACAA+GGG | 0.631010 | 1:-93487616 | None:intergenic |
| AAGTTGCAGGCACTGATAAG+GGG | 0.634301 | 1:+93486286 | MsG0180005569.01.T01:CDS |
| TTGATATTCAGAATGAGCAA+AGG | 0.635567 | 1:+93485824 | MsG0180005569.01.T01:CDS |
| GGCTAATACAGAATCATCAA+GGG | 0.638606 | 1:+93487335 | MsG0180005569.01.T01:CDS |
| TGCATATAGGAAATGGACAG+AGG | 0.657251 | 1:+93486952 | MsG0180005569.01.T01:intron |
| TTGAGTCCAAAAGCATGCAG+TGG | 0.666220 | 1:+93487159 | MsG0180005569.01.T01:CDS |
| TACCTAGTAAACTAACAACA+TGG | 0.670118 | 1:-93485525 | None:intergenic |
| TCGTGCCCAAAGGATCCGAA+TGG | 0.672384 | 1:+93486381 | MsG0180005569.01.T01:CDS |
| GAAATGTTCCTAGGCCAGTG+AGG | 0.680955 | 1:+93487445 | MsG0180005569.01.T01:CDS |
| AATTAAGCTTGACAGATCGG+CGG | 0.696688 | 1:+93487527 | MsG0180005569.01.T01:CDS |
| AAGGAATCATGCCATTGCTG+TGG | 0.703010 | 1:+93485843 | MsG0180005569.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAGATAATTATTAATT+AGG | - | Chr1:93486496-93486515 | None:intergenic | 10.0% |
| !! | TCAAGAAGAAAAATATATAT+CGG | + | Chr1:93487683-93487702 | MsG0180005569.01.T01:CDS | 15.0% |
| !! | TTCAACAATCAAATTAAAAT+TGG | - | Chr1:93486521-93486540 | None:intergenic | 15.0% |
| !!! | AATTTGATCATAAATTTTGT+AGG | + | Chr1:93486620-93486639 | MsG0180005569.01.T01:intron | 15.0% |
| !! | ATTGATGTCATAAACATAAT+TGG | + | Chr1:93486550-93486569 | MsG0180005569.01.T01:intron | 20.0% |
| !! | GAAAATAGATATTCCATAAA+TGG | + | Chr1:93487078-93487097 | MsG0180005569.01.T01:CDS | 20.0% |
| !!! | TAATTTTGCATTAGTTAAAG+TGG | + | Chr1:93486661-93486680 | MsG0180005569.01.T01:intron | 20.0% |
| ! | AAATTTATCGCCACAATTTA+AGG | + | Chr1:93486141-93486160 | MsG0180005569.01.T01:intron | 25.0% |
| ! | AATTTATCGCCACAATTTAA+GGG | + | Chr1:93486142-93486161 | MsG0180005569.01.T01:intron | 25.0% |
| ! | TGTCATTGAAGAAGTAATTT+CGG | - | Chr1:93485788-93485807 | None:intergenic | 25.0% |
| ! | TTAAATTGTGGCGATAAATT+TGG | - | Chr1:93486142-93486161 | None:intergenic | 25.0% |
| !! | ATGGATTTTTGTGAATCAAA+AGG | + | Chr1:93487003-93487022 | MsG0180005569.01.T01:CDS | 25.0% |
| !! | CACATTTTCAATATAAAGTG+TGG | - | Chr1:93486709-93486728 | None:intergenic | 25.0% |
| !! | GATAGACTAGACAATTTTAT+AGG | - | Chr1:93486879-93486898 | None:intergenic | 25.0% |
| !! | TCATTTTGCAACTTTCTTAT+AGG | + | Chr1:93485489-93485508 | MsG0180005569.01.T01:five_prime_UTR | 25.0% |
| !!! | ACAAACCAGAATTTTTCAAA+TGG | + | Chr1:93485646-93485665 | MsG0180005569.01.T01:CDS | 25.0% |
| !!! | GATTTTATTTGTAGATCTCT+TGG | - | Chr1:93485471-93485490 | None:intergenic | 25.0% |
| AGATGGGAAAAAAAGGTAAA+TGG | + | Chr1:93485560-93485579 | MsG0180005569.01.T01:exon | 30.0% | |
| AGTCCTTGAAATTGTATAGT+AGG | - | Chr1:93486195-93486214 | None:intergenic | 30.0% | |
| ATCTGACATTGTTCACTTTA+AGG | - | Chr1:93486104-93486123 | None:intergenic | 30.0% | |
| CTGTACCATTTGAAAAATTC+TGG | - | Chr1:93485654-93485673 | None:intergenic | 30.0% | |
| GCATTTCTGTGATTTAGATT+AGG | - | Chr1:93486421-93486440 | None:intergenic | 30.0% | |
| GTCCTTGAAATTGTATAGTA+GGG | - | Chr1:93486194-93486213 | None:intergenic | 30.0% | |
| TACCTAGTAAACTAACAACA+TGG | - | Chr1:93485528-93485547 | None:intergenic | 30.0% | |
| TACTGAAACAATCCTCAAAA+TGG | - | Chr1:93487185-93487204 | None:intergenic | 30.0% | |
| TCTAGTCATGAAATGAAATG+TGG | + | Chr1:93486924-93486943 | MsG0180005569.01.T01:intron | 30.0% | |
| TCTGACATTGTTCACTTTAA+GGG | - | Chr1:93486103-93486122 | None:intergenic | 30.0% | |
| TTCGGAATTATTCAATTCCT+TGG | - | Chr1:93485770-93485789 | None:intergenic | 30.0% | |
| TTGATATTCAGAATGAGCAA+AGG | + | Chr1:93485824-93485843 | MsG0180005569.01.T01:CDS | 30.0% | |
| ! | AAGTTGCTTTCAGTACTATA+TGG | - | Chr1:93485434-93485453 | None:intergenic | 30.0% |
| ! | ACTTCATTTTGTTCCTCATT+TGG | - | Chr1:93486901-93486920 | None:intergenic | 30.0% |
| ! | ATCCATGTTGTTAGTTTACT+AGG | + | Chr1:93485523-93485542 | MsG0180005569.01.T01:five_prime_UTR | 30.0% |
| ! | CCGAGTCCTTAAAATTTTAA+GGG | + | Chr1:93486034-93486053 | MsG0180005569.01.T01:intron | 30.0% |
| ! | GTAGTTTTCTTCTTTTGTGT+AGG | - | Chr1:93487106-93487125 | None:intergenic | 30.0% |
| ! | TCCGAGTCCTTAAAATTTTA+AGG | + | Chr1:93486033-93486052 | MsG0180005569.01.T01:intron | 30.0% |
| ! | TTTTGGACTCAATTCTGTTA+AGG | - | Chr1:93487151-93487170 | None:intergenic | 30.0% |
| ! | TTTTGTGTAGGAACCATTTA+TGG | - | Chr1:93487094-93487113 | None:intergenic | 30.0% |
| !! | CCCTTAAAATTTTAAGGACT+CGG | - | Chr1:93486037-93486056 | None:intergenic | 30.0% |
| !! | GTCCTTAAAATTTTAAGGGT+CGG | + | Chr1:93486038-93486057 | MsG0180005569.01.T01:intron | 30.0% |
| !!! | AAATGTGGTTTTGTGCATAT+AGG | + | Chr1:93486939-93486958 | MsG0180005569.01.T01:intron | 30.0% |
| !!! | ATGGAGTTTTAGAAGATCAT+CGG | + | Chr1:93485723-93485742 | MsG0180005569.01.T01:CDS | 30.0% |
| ACTCACATCATATGCAACAA+GGG | - | Chr1:93487619-93487638 | None:intergenic | 35.0% | |
| CAAAGACAGAGAAAAAGAGA+AGG | + | Chr1:93485612-93485631 | MsG0180005569.01.T01:CDS | 35.0% | |
| CAAAGATCATCTTCACAAGT+AGG | + | Chr1:93487471-93487490 | MsG0180005569.01.T01:CDS | 35.0% | |
| CAACATCAAAATTGTGGAGA+TGG | + | Chr1:93486984-93487003 | MsG0180005569.01.T01:CDS | 35.0% | |
| CATTTGAACCAGAAGTTAAC+CGG | - | Chr1:93485933-93485952 | None:intergenic | 35.0% | |
| CCATGTAACTTGGATACAAA+GGG | - | Chr1:93487317-93487336 | None:intergenic | 35.0% | |
| CTATGCTTACACATACACAT+TGG | - | Chr1:93486780-93486799 | None:intergenic | 35.0% | |
| CTTCTATTTAGTGTTGCACA+AGG | - | Chr1:93487777-93487796 | None:intergenic | 35.0% | |
| GACATTTGTTCTGCATAAGA+TGG | - | Chr1:93487285-93487304 | None:intergenic | 35.0% | |
| GAGAAAGAGATGGGAAAAAA+AGG | + | Chr1:93485553-93485572 | MsG0180005569.01.T01:exon | 35.0% | |
| GATATAGCAGAATAGCATTG+AGG | - | Chr1:93487222-93487241 | None:intergenic | 35.0% | |
| GCAAATTTGAAGGACTAAAC+TGG | - | Chr1:93486172-93486191 | None:intergenic | 35.0% | |
| GCTTAATTGACCATGGATAT+TGG | - | Chr1:93487515-93487534 | None:intergenic | 35.0% | |
| GGAAGACAACATCAAAATTG+TGG | + | Chr1:93486978-93486997 | MsG0180005569.01.T01:CDS | 35.0% | |
| GGCTAATACAGAATCATCAA+GGG | + | Chr1:93487335-93487354 | MsG0180005569.01.T01:CDS | 35.0% | |
| GTATAGTAGGGCAAATTTGA+AGG | - | Chr1:93486182-93486201 | None:intergenic | 35.0% | |
| GTCAATTAAGCTTGACAGAT+CGG | + | Chr1:93487524-93487543 | MsG0180005569.01.T01:CDS | 35.0% | |
| TACTCACATCATATGCAACA+AGG | - | Chr1:93487620-93487639 | None:intergenic | 35.0% | |
| TCTAAATCACAGAAATGCCA+TGG | + | Chr1:93486423-93486442 | MsG0180005569.01.T01:CDS | 35.0% | |
| TCTGTATTAGCCATGTAACT+TGG | - | Chr1:93487327-93487346 | None:intergenic | 35.0% | |
| TGCCCTACTATACAATTTCA+AGG | + | Chr1:93486189-93486208 | MsG0180005569.01.T01:intron | 35.0% | |
| TGGCTAATACAGAATCATCA+AGG | + | Chr1:93487334-93487353 | MsG0180005569.01.T01:CDS | 35.0% | |
| TGTAAGCATAGTATCATGTC+TGG | + | Chr1:93486789-93486808 | MsG0180005569.01.T01:intron | 35.0% | |
| TTGAAGGAAGAAATGTTCCT+AGG | + | Chr1:93487436-93487455 | MsG0180005569.01.T01:CDS | 35.0% | |
| TTGTCTAGTCTATCCAAATG+AGG | + | Chr1:93486885-93486904 | MsG0180005569.01.T01:intron | 35.0% | |
| TTTGTGAATGTTTGTGTGAC+AGG | + | Chr1:93486228-93486247 | MsG0180005569.01.T01:intron | 35.0% | |
| ! | CAATATAAAGTGTGGTGCTA+TGG | - | Chr1:93486701-93486720 | None:intergenic | 35.0% |
| ! | GACCGACCCTTAAAATTTTA+AGG | - | Chr1:93486043-93486062 | None:intergenic | 35.0% |
| ! | TGACCTATGAAGCACTAAAA+CGG | - | Chr1:93486818-93486837 | None:intergenic | 35.0% |
| !! | AATGAATCTGGCCTTTGTTT+TGG | - | Chr1:93487384-93487403 | None:intergenic | 35.0% |
| !! | GGCTTAAAAACTTGTTGACA+GGG | + | Chr1:93485581-93485600 | MsG0180005569.01.T01:CDS | 35.0% |
| !! | GGTTTTGTGCATATAGGAAA+TGG | + | Chr1:93486945-93486964 | MsG0180005569.01.T01:intron | 35.0% |
| !! | TGGCTTAAAAACTTGTTGAC+AGG | + | Chr1:93485580-93485599 | MsG0180005569.01.T01:CDS | 35.0% |
| AAAGGCCAGATTCATTTGAG+AGG | + | Chr1:93487388-93487407 | MsG0180005569.01.T01:CDS | 40.0% | |
| AATTAAGCTTGACAGATCGG+CGG | + | Chr1:93487527-93487546 | MsG0180005569.01.T01:CDS | 40.0% | |
| AGGTACTTGAGAGAAAGAGA+TGG | + | Chr1:93485543-93485562 | MsG0180005569.01.T01:exon | 40.0% | |
| AGTTGCCTCTCAAATGAATC+TGG | - | Chr1:93487396-93487415 | None:intergenic | 40.0% | |
| ATGTGTCTTTCGATCTCACT+TGG | + | Chr1:93485996-93486015 | MsG0180005569.01.T01:CDS | 40.0% | |
| CACAAAGTGCACCAAAACAA+AGG | + | Chr1:93487370-93487389 | MsG0180005569.01.T01:CDS | 40.0% | |
| CCCTTTGTATCCAAGTTACA+TGG | + | Chr1:93487314-93487333 | MsG0180005569.01.T01:CDS | 40.0% | |
| CCTCAAAAGAGAAGAAGAGA+TGG | + | Chr1:93485704-93485723 | MsG0180005569.01.T01:CDS | 40.0% | |
| CTCAATTCTGTTAAGGCTGA+TGG | - | Chr1:93487144-93487163 | None:intergenic | 40.0% | |
| CTCAGAACTACCAATATCCA+TGG | + | Chr1:93487502-93487521 | MsG0180005569.01.T01:CDS | 40.0% | |
| CTGTCAAGCTTAATTGACCA+TGG | - | Chr1:93487522-93487541 | None:intergenic | 40.0% | |
| CTTGGTGAGAAAACAAGCAA+AGG | + | Chr1:93486312-93486331 | MsG0180005569.01.T01:CDS | 40.0% | |
| GCCATGTAACTTGGATACAA+AGG | - | Chr1:93487318-93487337 | None:intergenic | 40.0% | |
| GGTACTTGAGAGAAAGAGAT+GGG | + | Chr1:93485544-93485563 | MsG0180005569.01.T01:exon | 40.0% | |
| GTTGTTGAAACAGGAGTAGT+TGG | - | Chr1:93485682-93485701 | None:intergenic | 40.0% | |
| TATCGCCACAATTTAAGGGT+CGG | + | Chr1:93486146-93486165 | MsG0180005569.01.T01:intron | 40.0% | |
| TGCATATAGGAAATGGACAG+AGG | + | Chr1:93486952-93486971 | MsG0180005569.01.T01:intron | 40.0% | |
| TGGATACAAAGGGTAGTCAT+AGG | - | Chr1:93487307-93487326 | None:intergenic | 40.0% | |
| TTCAATTCCTTGGAAGCTGT+CGG | - | Chr1:93485760-93485779 | None:intergenic | 40.0% | |
| TTTAGTGCTTCATAGGTCAC+TGG | + | Chr1:93486819-93486838 | MsG0180005569.01.T01:intron | 40.0% | |
| ! | CCATCTCTTCTTCTCTTTTG+AGG | - | Chr1:93485707-93485726 | None:intergenic | 40.0% |
| ! | TTTGAGGCTGTTGTTGAAAC+AGG | - | Chr1:93485691-93485710 | None:intergenic | 40.0% |
| !! | ATTGCGTGCTTTAAGAGGAT+TGG | + | Chr1:93486261-93486280 | MsG0180005569.01.T01:CDS | 40.0% |
| !! | CCATGGAAAATGACTTGTTC+AGG | + | Chr1:93486440-93486459 | MsG0180005569.01.T01:CDS | 40.0% |
| !! | CCTGAACAAGTCATTTTCCA+TGG | - | Chr1:93486443-93486462 | None:intergenic | 40.0% |
| !! | TGTCCGTTTTAGTGCTTCAT+AGG | + | Chr1:93486812-93486831 | MsG0180005569.01.T01:intron | 40.0% |
| !!! | ATTGTTTTGATTGCAGCCAG+AGG | + | Chr1:93487730-93487749 | MsG0180005569.01.T01:CDS | 40.0% |
| !!! | TTGTTTTGATTGCAGCCAGA+GGG | + | Chr1:93487731-93487750 | MsG0180005569.01.T01:CDS | 40.0% |
| AAGGAATCATGCCATTGCTG+TGG | + | Chr1:93485843-93485862 | MsG0180005569.01.T01:CDS | 45.0% | |
| ACTCAGATGTATGCAGGCTT+TGG | + | Chr1:93486339-93486358 | MsG0180005569.01.T01:CDS | 45.0% | |
| ACTGAGTCGGCGAAGAATTT+CGG | + | Chr1:93487413-93487432 | MsG0180005569.01.T01:CDS | 45.0% | |
| ATAGGAAATGGACAGAGGCT+TGG | + | Chr1:93486957-93486976 | MsG0180005569.01.T01:intron | 45.0% | |
| ATGGCCTAGGGAAAGCAAAA+GGG | - | Chr1:93487266-93487285 | None:intergenic | 45.0% | |
| CATTTGAGAGGCAACTGAGT+CGG | + | Chr1:93487400-93487419 | MsG0180005569.01.T01:CDS | 45.0% | |
| GATGATCTTTGCATCCTCAC+TGG | - | Chr1:93487462-93487481 | None:intergenic | 45.0% | |
| GCTTTCCTTCTGACACCATT+CGG | - | Chr1:93486399-93486418 | None:intergenic | 45.0% | |
| GTTCTGCATAAGATGGCCTA+GGG | - | Chr1:93487278-93487297 | None:intergenic | 45.0% | |
| GTTTGTGTGACAGGCAAGAA+AGG | + | Chr1:93486237-93486256 | MsG0180005569.01.T01:intron | 45.0% | |
| TGACACCATTCGGATCCTTT+GGG | - | Chr1:93486389-93486408 | None:intergenic | 45.0% | |
| TGTTCTGCATAAGATGGCCT+AGG | - | Chr1:93487279-93487298 | None:intergenic | 45.0% | |
| ! | AAATGGCCACTGCATGCTTT+TGG | - | Chr1:93487168-93487187 | None:intergenic | 45.0% |
| ! | AAGAGGATTGGTGAAGTTGC+AGG | + | Chr1:93486273-93486292 | MsG0180005569.01.T01:CDS | 45.0% |
| ! | ATCACCCTTTTGCTTTCCCT+AGG | + | Chr1:93487259-93487278 | MsG0180005569.01.T01:CDS | 45.0% |
| ! | TCTGAGACACTGTAACTTGC+TGG | - | Chr1:93486741-93486760 | None:intergenic | 45.0% |
| ! | TTGAGTCCAAAAGCATGCAG+TGG | + | Chr1:93487159-93487178 | MsG0180005569.01.T01:CDS | 45.0% |
| !! | AAGGCATTGCGTGCTTTAAG+AGG | + | Chr1:93486256-93486275 | MsG0180005569.01.T01:CDS | 45.0% |
| !! | AAGTTGCAGGCACTGATAAG+GGG | + | Chr1:93486286-93486305 | MsG0180005569.01.T01:CDS | 45.0% |
| !! | ACTGTAACTTGCTGGATGCT+CGG | - | Chr1:93486733-93486752 | None:intergenic | 45.0% |
| !! | GAAGTTGCAGGCACTGATAA+GGG | + | Chr1:93486285-93486304 | MsG0180005569.01.T01:CDS | 45.0% |
| !! | TGAAGTTGCAGGCACTGATA+AGG | + | Chr1:93486284-93486303 | MsG0180005569.01.T01:CDS | 45.0% |
| ACTCAGTACCTATCTCCCTC+TGG | - | Chr1:93487749-93487768 | None:intergenic | 50.0% | |
| ACTGGCCGACCCTTAAATTG+TGG | - | Chr1:93486154-93486173 | None:intergenic | 50.0% | |
| CGGCGAAGAATTTCGGTTGA+AGG | + | Chr1:93487420-93487439 | MsG0180005569.01.T01:CDS | 50.0% | |
| CTGACACCATTCGGATCCTT+TGG | - | Chr1:93486390-93486409 | None:intergenic | 50.0% | |
| GAAATGTTCCTAGGCCAGTG+AGG | + | Chr1:93487445-93487464 | MsG0180005569.01.T01:CDS | 50.0% | |
| GATGGCCTAGGGAAAGCAAA+AGG | - | Chr1:93487267-93487286 | None:intergenic | 50.0% | |
| GCTGTGATCCGGTTAACTTC+TGG | + | Chr1:93485922-93485941 | MsG0180005569.01.T01:CDS | 50.0% | |
| GGCAACACTCAGATGTATGC+AGG | + | Chr1:93486333-93486352 | MsG0180005569.01.T01:CDS | 50.0% | |
| TCACTCAAAGACAGCGAGTG+TGG | + | Chr1:93487552-93487571 | MsG0180005569.01.T01:CDS | 50.0% | |
| TCTGTTAAGGCTGATGGAGC+TGG | - | Chr1:93487138-93487157 | None:intergenic | 50.0% | |
| ! | AGGATCCGAATGGTGTCAGA+AGG | + | Chr1:93486391-93486410 | MsG0180005569.01.T01:CDS | 50.0% |
| !! | ACATTGGTGTCGTGTCGTGT+CGG | - | Chr1:93486764-93486783 | None:intergenic | 50.0% |
| !! | AGCATGCAGTGGCCATTTTG+AGG | + | Chr1:93487170-93487189 | MsG0180005569.01.T01:CDS | 50.0% |
| AAGCTAGAGCTCGTGCCCAA+AGG | + | Chr1:93486371-93486390 | MsG0180005569.01.T01:CDS | 55.0% | |
| AAGCTGCAGCTGCTGTGATC+CGG | + | Chr1:93485911-93485930 | MsG0180005569.01.T01:CDS | 55.0% | |
| AGCTACACCGACAGCTTCCA+AGG | + | Chr1:93485750-93485769 | MsG0180005569.01.T01:CDS | 55.0% | |
| CATTGCTGTGGCTGCTGCTA+CGG | + | Chr1:93485855-93485874 | MsG0180005569.01.T01:CDS | 55.0% | |
| GATTGCAGCCAGAGGGAGAT+AGG | + | Chr1:93487738-93487757 | MsG0180005569.01.T01:CDS | 55.0% | |
| TCGTGCCCAAAGGATCCGAA+TGG | + | Chr1:93486381-93486400 | MsG0180005569.01.T01:CDS | 55.0% | |
| ! | CTTTGCATCCTCACTGGCCT+AGG | - | Chr1:93487456-93487475 | None:intergenic | 55.0% |
| !! | GGCACTGATAAGGGGTCACT+TGG | + | Chr1:93486294-93486313 | MsG0180005569.01.T01:CDS | 55.0% |
| CGTAGCAGCAGCCACAGCAA+TGG | - | Chr1:93485857-93485876 | None:intergenic | 60.0% | |
| TGCGGCAGCTGATGCAGCAG+TGG | + | Chr1:93485879-93485898 | MsG0180005569.01.T01:CDS | 65.0% | |
| TGTGGCTGCTGCTACGGCTG+CGG | + | Chr1:93485861-93485880 | MsG0180005569.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 93485427 | 93487836 | 93485427 | ID=MsG0180005569.01;Name=MsG0180005569.01 |
| Chr1 | mRNA | 93485427 | 93487836 | 93485427 | ID=MsG0180005569.01.T01;Parent=MsG0180005569.01;Name=MsG0180005569.01.T01;_AED=0.18;_eAED=0.28;_QI=135|1|0.66|1|1|1|3|0|518 |
| Chr1 | exon | 93485427 | 93486017 | 93485427 | ID=MsG0180005569.01.T01:exon:16096;Parent=MsG0180005569.01.T01 |
| Chr1 | exon | 93486250 | 93486474 | 93486250 | ID=MsG0180005569.01.T01:exon:16097;Parent=MsG0180005569.01.T01 |
| Chr1 | exon | 93486961 | 93487836 | 93486961 | ID=MsG0180005569.01.T01:exon:16098;Parent=MsG0180005569.01.T01 |
| Chr1 | five_prime_UTR | 93485427 | 93485561 | 93485427 | ID=MsG0180005569.01.T01:five_prime_utr;Parent=MsG0180005569.01.T01 |
| Chr1 | CDS | 93485562 | 93486017 | 93485562 | ID=MsG0180005569.01.T01:cds;Parent=MsG0180005569.01.T01 |
| Chr1 | CDS | 93486250 | 93486474 | 93486250 | ID=MsG0180005569.01.T01:cds;Parent=MsG0180005569.01.T01 |
| Chr1 | CDS | 93486961 | 93487836 | 93486961 | ID=MsG0180005569.01.T01:cds;Parent=MsG0180005569.01.T01 |
| Gene Sequence |
| Protein sequence |
