AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021380.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021380.01.T01 MTR_4g072820 91.860 86 7 0 1 86 1 86 1.55e-54 164
MsG0480021380.01.T01 MTR_4g072610 77.381 84 18 1 1 84 1 83 3.56e-43 135
MsG0480021380.01.T01 MTR_3g084150 71.429 91 19 2 1 85 1 90 1.04e-42 134
MsG0480021380.01.T01 MTR_4g072580 78.824 85 16 2 1 84 1 84 1.51e-42 133
MsG0480021380.01.T01 MTR_4g072740 76.744 86 18 2 1 85 1 85 1.87e-42 133
MsG0480021380.01.T01 MTR_4g072370 74.157 89 18 2 1 85 1 88 3.97e-42 132
MsG0480021380.01.T01 MTR_4g072650 77.381 84 18 1 1 84 1 83 4.07e-42 132
MsG0480021380.01.T01 MTR_3g084180 70.330 91 20 2 1 85 1 90 9.07e-42 132
MsG0480021380.01.T01 MTR_4g072490 75.581 86 19 2 1 85 1 85 1.04e-41 131
MsG0480021380.01.T01 MTR_4g072380 78.313 83 17 1 1 82 1 83 3.41e-41 130
MsG0480021380.01.T01 MTR_8g461410 68.132 91 22 2 1 85 1 90 3.42e-41 130
MsG0480021380.01.T01 MTR_4g072310 69.565 92 20 2 1 85 1 91 6.10e-40 127
MsG0480021380.01.T01 MTR_4g072870 68.132 91 23 2 1 85 1 91 6.35e-40 127
MsG0480021380.01.T01 MTR_4g072470 74.419 86 20 2 1 85 1 85 6.71e-40 127
MsG0480021380.01.T01 MTR_3g084240 70.000 90 22 2 1 85 1 90 1.06e-39 126
MsG0480021380.01.T01 MTR_3g110038 68.889 90 23 2 1 85 1 90 1.16e-39 126
MsG0480021380.01.T01 MTR_4g072500 68.889 90 23 1 1 85 1 90 1.61e-39 126
MsG0480021380.01.T01 MTR_3g084170 68.889 90 23 2 1 85 1 90 4.09e-39 125
MsG0480021380.01.T01 MTR_3g110042 70.000 90 20 2 1 84 1 89 5.09e-39 125
MsG0480021380.01.T01 MTR_4g072260 68.889 90 22 2 1 84 1 90 5.18e-39 125
MsG0480021380.01.T01 MTR_4g072330 65.909 88 27 1 1 85 1 88 6.52e-39 124
MsG0480021380.01.T01 MTR_4g072240 64.835 91 26 1 1 85 1 91 6.79e-39 124
MsG0480021380.01.T01 MTR_4g072220 68.889 90 22 2 1 84 1 90 6.89e-39 124
MsG0480021380.01.T01 MTR_4g072630 72.414 87 21 2 1 85 1 86 1.12e-38 124
MsG0480021380.01.T01 MTR_4g072640 67.778 90 24 2 1 85 1 90 3.91e-38 122
MsG0480021380.01.T01 MTR_4g072530 66.667 90 25 1 1 85 1 90 3.99e-38 122
MsG0480021380.01.T01 MTR_4g050700 67.033 91 24 2 1 85 1 91 6.97e-38 122
MsG0480021380.01.T01 MTR_2g012410 67.033 91 24 2 1 85 1 91 6.97e-38 122
MsG0480021380.01.T01 MTR_4g072830 72.727 88 19 3 1 84 1 87 9.69e-38 121
MsG0480021380.01.T01 MTR_4g072670 74.713 87 19 2 1 85 1 86 1.01e-37 121
MsG0480021380.01.T01 MTR_4g072300 62.637 91 28 1 1 85 1 91 1.30e-37 121
MsG0480021380.01.T01 MTR_4g072890 65.934 91 25 2 1 85 1 91 1.43e-37 121
MsG0480021380.01.T01 MTR_3g084250 68.132 91 22 2 1 85 1 90 1.44e-37 121
MsG0480021380.01.T01 MTR_4g072465 71.264 87 22 2 1 85 1 86 1.46e-37 121
MsG0480021380.01.T01 MTR_4g072880 67.391 92 22 3 1 85 1 91 1.50e-37 121
MsG0480021380.01.T01 MTR_4g072600 72.941 85 21 2 1 84 1 84 1.73e-37 120
MsG0480021380.01.T01 MTR_4g072540 74.713 87 19 2 1 85 1 86 4.01e-37 120
MsG0480021380.01.T01 MTR_3g084220 65.556 90 26 2 1 85 1 90 5.69e-37 119
MsG0480021380.01.T01 MTR_4g072850 65.591 93 23 2 1 85 1 92 6.16e-37 119
MsG0480021380.01.T01 MTR_4g072720 73.563 87 20 2 1 85 1 86 6.28e-37 119
MsG0480021380.01.T01 MTR_4g072230 70.000 90 17 3 1 83 1 87 1.30e-36 119
MsG0480021380.01.T01 MTR_4g072480 64.835 91 25 2 1 85 1 90 1.74e-36 118
MsG0480021380.01.T01 MTR_3g084260 62.637 91 28 1 1 85 1 91 1.75e-36 118
MsG0480021380.01.T01 MTR_4g072590 71.765 85 24 0 1 85 1 85 1.95e-36 118
MsG0480021380.01.T01 MTR_3g117630 67.442 86 21 2 6 85 6 90 3.01e-36 118
MsG0480021380.01.T01 MTR_4g072250 68.478 92 20 3 1 85 1 90 4.37e-36 117
MsG0480021380.01.T01 MTR_4g072570 64.835 91 25 2 1 85 1 90 5.44e-36 117
MsG0480021380.01.T01 MTR_8g461420 70.000 90 22 1 1 85 1 90 5.69e-36 117
MsG0480021380.01.T01 MTR_4g072510 71.264 87 22 2 1 85 1 86 1.58e-35 115
MsG0480021380.01.T01 MTR_3g084190 67.778 90 24 1 1 85 1 90 2.39e-35 115
MsG0480021380.01.T01 MTR_3g110032 64.130 92 25 3 1 85 1 91 2.44e-35 115
MsG0480021380.01.T01 MTR_4g072620 61.538 91 28 2 1 85 1 90 3.71e-35 115
MsG0480021380.01.T01 MTR_3g084230 69.231 91 21 2 1 85 1 90 4.05e-35 115
MsG0480021380.01.T01 MTR_4g072660 64.634 82 29 0 1 82 1 82 5.55e-35 114
MsG0480021380.01.T01 MTR_4g072680 62.637 91 27 2 1 85 1 90 6.14e-35 114
MsG0480021380.01.T01 MTR_4g072730 61.538 91 28 2 1 85 1 90 7.73e-35 114
MsG0480021380.01.T01 MTR_3g084210 67.033 91 23 2 1 85 1 90 8.17e-35 114
MsG0480021380.01.T01 MTR_4g072690 68.235 85 27 0 1 85 1 85 1.29e-34 113
MsG0480021380.01.T01 MTR_4g072270 64.045 89 24 2 1 82 1 88 1.36e-34 114
MsG0480021380.01.T01 MTR_4g072770 64.706 85 25 1 1 85 1 80 1.42e-34 113
MsG0480021380.01.T01 MTR_5g008350 74.667 75 17 2 1 74 1 74 3.51e-34 112
MsG0480021380.01.T01 MTR_3g110045 69.663 89 20 2 3 85 62 149 7.62e-34 114
MsG0480021380.01.T01 MTR_4g072860 64.130 92 25 2 1 85 1 91 1.03e-33 111
MsG0480021380.01.T01 MTR_4g072460 60.440 91 29 2 1 85 1 90 1.68e-33 111
MsG0480021380.01.T01 MTR_3g084160 65.934 91 24 2 1 85 1 90 5.81e-33 109
MsG0480021380.01.T01 MTR_4g072940 63.736 91 24 2 3 85 33 122 1.18e-32 110
MsG0480021380.01.T01 MTR_4g072450 65.882 85 29 0 1 85 1 85 1.55e-32 108
MsG0480021380.01.T01 MTR_5g008370 78.788 66 14 0 20 85 25 90 1.56e-32 110
MsG0480021380.01.T01 MTR_5g008360 67.105 76 24 1 10 85 7 81 8.67e-32 106
MsG0480021380.01.T01 MTR_4g072980 55.172 87 38 1 1 86 8 94 1.02e-30 104
MsG0480021380.01.T01 MTR_4g072550 61.446 83 28 1 7 85 19 101 2.08e-30 103
MsG0480021380.01.T01 MTR_4g072560 59.524 84 31 2 4 86 18 99 6.69e-30 102
MsG0480021380.01.T01 MTR_4g072840 62.791 86 7 2 1 86 1 61 1.30e-28 97.8
MsG0480021380.01.T01 MTR_4g072910 61.538 78 27 1 8 85 26 100 1.83e-28 98.6
MsG0480021380.01.T01 MTR_3g084200 68.493 73 16 3 1 67 1 72 2.22e-28 98.6
MsG0480021380.01.T01 MTR_3g117640 65.672 67 22 1 20 85 34 100 4.52e-28 97.8
MsG0480021380.01.T01 MTR_4g072290 57.647 85 28 1 1 85 1 77 2.76e-26 92.4
MsG0480021380.01.T01 MTR_4g072750 65.753 73 18 1 1 66 1 73 3.18e-26 92.4
MsG0480021380.01.T01 MTR_3g110035 64.062 64 23 0 22 85 73 136 4.44e-24 88.6
MsG0480021380.01.T01 MTR_3g113310 57.576 66 27 1 20 85 42 106 1.53e-23 86.3
MsG0480021380.01.T01 MTR_4g072930 52.500 80 34 1 10 85 31 110 8.98e-23 84.7
MsG0480021380.01.T01 MTR_4g072280 54.667 75 28 1 1 69 1 75 7.03e-22 81.3
MsG0480021380.01.T01 MTR_3g117610 60.317 63 24 1 20 82 45 106 9.44e-22 82.0
MsG0480021380.01.T01 MTR_6g077850 56.923 65 28 0 20 84 34 98 2.55e-21 80.5
MsG0480021380.01.T01 MTR_4g072190 56.061 66 28 1 20 85 36 100 6.98e-21 79.3
MsG0480021380.01.T01 MTR_8g076040 55.385 65 28 1 18 82 39 102 2.56e-19 75.5
MsG0480021380.01.T01 MTR_5g021820 47.500 80 40 2 7 85 26 104 3.46e-19 75.1
MsG0480021380.01.T01 MTR_4g124750 48.649 74 37 1 12 85 61 133 4.70e-17 71.2
MsG0480021380.01.T01 MTR_2g043960 52.239 67 28 2 20 86 76 138 2.51e-16 69.3
MsG0480021380.01.T01 MTR_8g461400 44.444 90 19 3 1 85 1 64 2.66e-16 67.0
MsG0480021380.01.T01 MTR_1g009150 50.746 67 32 1 11 77 62 127 4.07e-16 69.3
MsG0480021380.01.T01 MTR_4g005310 47.059 68 35 1 14 80 56 123 4.27e-16 68.6
MsG0480021380.01.T01 MTR_4g005320 50.820 61 29 1 17 77 67 126 7.16e-15 65.9
MsG0480021380.01.T01 MTR_1g094750 49.180 61 30 1 20 80 50 109 9.15e-15 64.3
MsG0480021380.01.T01 MTR_1g024085 47.826 69 35 1 9 77 26 93 1.42e-14 64.7
MsG0480021380.01.T01 MTR_4g025830 44.118 68 34 2 20 84 79 145 3.15e-14 63.9
MsG0480021380.01.T01 MTR_3g109160 51.667 60 28 1 18 77 67 125 1.52e-13 62.4
MsG0480021380.01.T01 MTR_7g118010 40.741 81 40 3 2 80 10 84 5.97e-13 59.3
MsG0480021380.01.T01 MTR_7g101740 47.692 65 33 1 18 82 38 101 6.24e-13 59.7
MsG0480021380.01.T01 MTR_8g461210 46.667 60 31 1 18 77 33 91 2.21e-12 58.2
MsG0480021380.01.T01 MTR_1g063950 45.902 61 32 1 20 80 48 107 2.83e-12 58.2
MsG0480021380.01.T01 MTR_4g072160 48.387 62 29 2 20 80 37 96 3.38e-12 58.2
MsG0480021380.01.T01 MTR_7g104950 33.766 77 50 1 10 86 40 115 4.38e-12 57.8
MsG0480021380.01.T01 MTR_3g092220 50.000 60 27 2 20 77 33 91 5.59e-12 57.0
MsG0480021380.01.T01 MTR_8g026730 44.262 61 31 2 19 77 26 85 7.00e-12 56.6
MsG0480021380.01.T01 MTR_1g059770 35.211 71 45 1 16 86 45 114 8.73e-12 57.0
MsG0480021380.01.T01 MTR_3g105900 71.429 35 10 0 20 54 1172 1206 9.55e-12 59.3
MsG0480021380.01.T01 MTR_1g061570 46.970 66 34 1 12 77 11 75 9.66e-12 56.6
MsG0480021380.01.T01 MTR_2g066830 39.706 68 36 2 5 72 47 109 1.58e-11 56.6
MsG0480021380.01.T01 MTR_2g095430 40.845 71 37 2 7 73 32 101 1.73e-11 56.2
MsG0480021380.01.T01 MTR_7g405740 37.838 74 45 1 7 80 54 126 2.20e-11 56.6
MsG0480021380.01.T01 MTR_4g021810 47.761 67 33 2 12 77 18 83 2.37e-11 55.1
MsG0480021380.01.T01 MTR_8g096470 43.333 60 33 1 21 80 47 105 4.90e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021380.01.T01 AT5G18050 64.474 76 26 1 11 85 15 90 3.74e-32 107
MsG0480021380.01.T01 AT5G18020 64.474 76 26 1 11 85 15 90 4.39e-32 107
MsG0480021380.01.T01 AT5G18060 64.474 76 26 1 11 85 15 90 1.32e-31 106
MsG0480021380.01.T01 AT4G38840 71.642 67 18 1 20 85 33 99 1.33e-31 106
MsG0480021380.01.T01 AT5G18080 64.474 76 26 1 11 85 15 90 1.38e-31 106
MsG0480021380.01.T01 AT5G18030 58.537 82 33 1 5 85 7 88 1.91e-30 103
MsG0480021380.01.T01 AT5G18010 61.842 76 28 1 11 85 15 90 1.79e-29 100
MsG0480021380.01.T01 AT2G21200 62.338 77 27 2 9 84 11 86 2.59e-29 100
MsG0480021380.01.T01 AT2G21210 55.789 95 30 3 1 84 1 94 2.80e-29 100
MsG0480021380.01.T01 AT4G34810 60.976 82 27 2 9 85 37 118 6.27e-29 100
MsG0480021380.01.T01 AT3G03840 55.172 87 31 2 1 85 14 94 8.02e-29 99.4
MsG0480021380.01.T01 AT2G21210 55.789 95 30 3 1 84 68 161 1.24e-28 100
MsG0480021380.01.T01 AT4G38850 59.259 81 25 2 8 85 14 89 1.51e-28 98.6
MsG0480021380.01.T01 AT4G38825 61.765 68 25 1 19 85 22 89 4.97e-28 97.4
MsG0480021380.01.T01 AT4G34800 55.556 90 36 2 1 86 1 90 6.25e-28 97.1
MsG0480021380.01.T01 AT3G03820 53.409 88 32 2 1 85 14 95 8.32e-28 97.1
MsG0480021380.01.T01 AT4G34770 62.162 74 26 1 13 84 28 101 2.12e-27 96.3
MsG0480021380.01.T01 AT3G03850 55.294 85 36 1 3 85 8 92 1.22e-26 94.0
MsG0480021380.01.T01 AT4G13790 50.000 80 37 2 8 85 14 92 7.52e-25 89.4
MsG0480021380.01.T01 AT3G03830 60.294 68 24 1 21 85 25 92 1.31e-24 88.6
MsG0480021380.01.T01 AT4G34790 60.294 68 25 1 20 85 39 106 4.34e-23 85.5
MsG0480021380.01.T01 AT4G38860 57.576 66 28 0 20 85 40 105 1.53e-22 84.0
MsG0480021380.01.T01 AT4G34780 50.000 80 37 1 9 85 17 96 5.72e-22 82.4
MsG0480021380.01.T01 AT1G75580 59.091 66 26 1 20 85 44 108 2.78e-21 80.9
MsG0480021380.01.T01 AT2G21220 55.385 65 28 1 20 84 40 103 2.05e-20 78.6
MsG0480021380.01.T01 AT4G34760 54.545 66 29 1 20 85 43 107 3.19e-20 78.2
MsG0480021380.01.T01 AT2G16580 54.545 66 29 1 20 85 44 108 9.42e-20 77.0
MsG0480021380.01.T01 AT1G19830 59.701 67 25 2 20 85 48 113 5.28e-19 75.1
MsG0480021380.01.T01 AT4G36110 53.846 65 29 1 18 82 38 101 2.44e-18 73.2
MsG0480021380.01.T01 AT2G18010 55.556 63 27 1 20 82 48 109 7.97e-18 72.0
MsG0480021380.01.T01 AT3G43120 52.239 67 28 2 20 86 79 141 1.37e-17 72.8
MsG0480021380.01.T01 AT5G66260 46.753 77 40 1 9 85 23 98 2.57e-16 67.8
MsG0480021380.01.T01 AT5G20810 52.239 67 28 2 20 86 79 141 6.17e-16 68.6
MsG0480021380.01.T01 AT3G51200 49.254 67 33 1 14 80 34 99 8.32e-16 66.6
MsG0480021380.01.T01 AT5G20810 52.239 67 28 2 20 86 79 141 9.96e-16 68.6
MsG0480021380.01.T01 AT3G20220 43.662 71 38 2 11 80 38 107 2.62e-15 65.9
MsG0480021380.01.T01 AT3G60690 43.662 71 36 2 18 85 86 155 2.17e-14 64.7
MsG0480021380.01.T01 AT2G45210 42.466 73 38 2 15 84 74 145 2.81e-14 64.3
MsG0480021380.01.T01 AT5G10990 41.573 89 41 3 4 86 29 112 6.24e-14 63.2
MsG0480021380.01.T01 AT2G37030 49.180 61 30 1 20 80 49 108 1.15e-13 61.6
MsG0480021380.01.T01 AT4G31320 47.143 70 36 1 8 77 68 136 1.52e-13 62.8
MsG0480021380.01.T01 AT2G24400 47.143 70 36 1 8 77 52 120 1.53e-13 62.8
MsG0480021380.01.T01 AT1G75590 47.059 68 34 2 11 77 32 98 1.26e-12 59.7
MsG0480021380.01.T01 AT4G34750 43.284 67 37 1 11 77 28 93 1.37e-12 59.7
MsG0480021380.01.T01 AT4G34750 43.284 67 37 1 11 77 28 93 1.37e-12 59.7
MsG0480021380.01.T01 AT3G61900 40.845 71 38 2 10 77 20 89 2.22e-12 58.5
MsG0480021380.01.T01 AT1G19840 47.143 70 35 2 9 77 29 97 7.36e-12 57.8
MsG0480021380.01.T01 AT2G46690 41.096 73 38 3 8 77 13 83 1.14e-11 56.6
MsG0480021380.01.T01 AT1G56150 41.270 63 36 1 10 72 28 89 1.33e-11 56.2
MsG0480021380.01.T01 AT3G12830 41.429 70 38 2 3 72 35 101 1.49e-11 56.6
MsG0480021380.01.T01 AT4G09530 41.429 70 38 2 14 80 22 91 1.72e-11 55.5
MsG0480021380.01.T01 AT4G12410 39.189 74 41 2 14 84 70 142 2.86e-11 56.2
MsG0480021380.01.T01 AT3G53250 42.623 61 31 1 20 80 52 108 3.17e-11 55.5
MsG0480021380.01.T01 AT4G00880 48.387 62 29 2 18 77 26 86 4.20e-11 55.1

Find 19 sgRNAs with CRISPR-Local

Find 20 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAAGCAGAAGAAGAATT+TGG 0.279041 4:-57270959 MsG0480021380.01.T01:CDS
CTTTCTTACAACTCTCTTCT+CGG 0.306926 4:-57270889 MsG0480021380.01.T01:CDS
TTCGCTTATCTGGTATTAGA+AGG 0.346910 4:-57271108 MsG0480021380.01.T01:CDS
TAAACTGCGAGGTAGCCTTT+TGG 0.378136 4:+57271055 None:intergenic
AAGCTGGTTCAATATTGAAA+TGG 0.380921 4:+57271000 None:intergenic
AGCTGGTTCAATATTGAAAT+GGG 0.445913 4:+57271001 None:intergenic
ATTTGGATATGATCATCCTA+TGG 0.456415 4:-57270942 MsG0480021380.01.T01:CDS
GTAATTCTTGAAATGAAAGC+TGG 0.496692 4:+57270984 None:intergenic
TAAGAAAGCATCTTCACTGC+AGG 0.497337 4:+57270904 None:intergenic
TGGGATTGCATCCACAGCCT+TGG 0.507805 4:+57271075 None:intergenic
GTCATCATCTTCCAAGGCTG+TGG 0.512173 4:-57271086 MsG0480021380.01.T01:CDS
GGCTACCTCGCAGTTTATGT+TGG 0.513695 4:-57271049 MsG0480021380.01.T01:CDS
GCTGTGGATGCAATCCCAAA+AGG 0.559098 4:-57271070 MsG0480021380.01.T01:CDS
TTTGGATATGATCATCCTAT+GGG 0.586077 4:-57270941 MsG0480021380.01.T01:CDS
TAGAAGGTCATCATCTTCCA+AGG 0.592917 4:-57271092 MsG0480021380.01.T01:CDS
AAGAAAGCATCTTCACTGCA+GGG 0.633693 4:+57270905 None:intergenic
GGATATGATCATCCTATGGG+TGG 0.645721 4:-57270938 MsG0480021380.01.T01:CDS
GGAATTGTGAGACCACCCAT+AGG 0.657747 4:+57270926 None:intergenic
TTTCTCCAACATAAACTGCG+AGG 0.736972 4:+57271044 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATTTGGATATGATCATCCTA+TGG - Chr4:57271050-57271069 MsG0480021380.01.T01:CDS 30.0%
GTAATTCTTGAAATGAAAGC+TGG + Chr4:57271011-57271030 None:intergenic 30.0%
TTTGGATATGATCATCCTAT+GGG - Chr4:57271051-57271070 MsG0480021380.01.T01:CDS 30.0%
! AAGCTGGTTCAATATTGAAA+TGG + Chr4:57270995-57271014 None:intergenic 30.0%
! AGCTGGTTCAATATTGAAAT+GGG + Chr4:57270994-57271013 None:intergenic 30.0%
CATCAAGCAGAAGAAGAATT+TGG - Chr4:57271033-57271052 MsG0480021380.01.T01:CDS 35.0%
CTTTCTTACAACTCTCTTCT+CGG - Chr4:57271103-57271122 MsG0480021380.01.T01:CDS 35.0%
TTCGCTTATCTGGTATTAGA+AGG - Chr4:57270884-57270903 MsG0480021380.01.T01:CDS 35.0%
TAGAAGGTCATCATCTTCCA+AGG - Chr4:57270900-57270919 MsG0480021380.01.T01:CDS 40.0%
TTTCTCCAACATAAACTGCG+AGG + Chr4:57270951-57270970 None:intergenic 40.0%
!! AAGAAAGCATCTTCACTGCA+GGG + Chr4:57271090-57271109 None:intergenic 40.0%
!! TAAGAAAGCATCTTCACTGC+AGG + Chr4:57271091-57271110 None:intergenic 40.0%
GGATATGATCATCCTATGGG+TGG - Chr4:57271054-57271073 MsG0480021380.01.T01:CDS 45.0%
! AAACTGCGAGGTAGCCTTTT+GGG + Chr4:57270939-57270958 None:intergenic 45.0%
! TAAACTGCGAGGTAGCCTTT+TGG + Chr4:57270940-57270959 None:intergenic 45.0%
GCTGTGGATGCAATCCCAAA+AGG - Chr4:57270922-57270941 MsG0480021380.01.T01:CDS 50.0%
GGAATTGTGAGACCACCCAT+AGG + Chr4:57271069-57271088 None:intergenic 50.0%
GGCTACCTCGCAGTTTATGT+TGG - Chr4:57270943-57270962 MsG0480021380.01.T01:CDS 50.0%
GTCATCATCTTCCAAGGCTG+TGG - Chr4:57270906-57270925 MsG0480021380.01.T01:CDS 50.0%
TGGGATTGCATCCACAGCCT+TGG + Chr4:57270920-57270939 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 57270877 57271137 57270877 ID=MsG0480021380.01;Name=MsG0480021380.01
Chr4 mRNA 57270877 57271137 57270877 ID=MsG0480021380.01.T01;Parent=MsG0480021380.01;Name=MsG0480021380.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|86
Chr4 exon 57270877 57271137 57270877 ID=MsG0480021380.01.T01:exon:7231;Parent=MsG0480021380.01.T01
Chr4 CDS 57270877 57271137 57270877 ID=MsG0480021380.01.T01:cds;Parent=MsG0480021380.01.T01
Gene Sequence

>MsG0480021380.01.T01

ATGGGTTTTCGCTTATCTGGTATTAGAAGGTCATCATCTTCCAAGGCTGTGGATGCAATCCCAAAAGGCTACCTCGCAGTTTATGTTGGAGAAAAAATGAAGCGATTTGTGATTCCCATTTCAATATTGAACCAGCTTTCATTTCAAGAATTACTACATCAAGCAGAAGAAGAATTTGGATATGATCATCCTATGGGTGGTCTCACAATTCCCTGCAGTGAAGATGCTTTCTTACAACTCTCTTCTCGGCTTCAGTGTTAA

Protein sequence

>MsG0480021380.01.T01

MGFRLSGIRRSSSSKAVDAIPKGYLAVYVGEKMKRFVIPISILNQLSFQELLHQAEEEFGYDHPMGGLTIPCSEDAFLQLSSRLQC*