Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021380.01.T01 | AES89350.1 | 91.86 | 86 | 7 | 0 | 1 | 86 | 1 | 86 | 1.28E-50 | 164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021380.01.T01 | P33081 | 76.471 | 85 | 17 | 2 | 1 | 85 | 1 | 82 | 1.08E-39 | 129 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021380.01.T01 | G7JMA7 | 91.860 | 86 | 7 | 0 | 1 | 86 | 1 | 86 | 6.11e-51 | 164 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380013499.01 | MsG0480021380.01 | 0.805852 | 1.092640e-49 | 5.842890e-47 |
MsG0380014386.01 | MsG0480021380.01 | 0.801589 | 8.385481e-49 | 4.019721e-46 |
MsG0480021380.01 | MsG0480023661.01 | 0.804947 | 1.691229e-49 | 8.835884e-47 |
MsG0480021380.01 | MsG0580024759.01 | 0.816186 | 6.296170e-52 | 4.430774e-49 |
MsG0480021380.01 | MsG0780039975.01 | 0.807434 | 5.063714e-50 | 2.820108e-47 |
MsG0480021380.01 | MsG0880043249.01 | 0.800441 | 1.439027e-48 | 6.701074e-46 |
MsG0380014926.01 | MsG0480021380.01 | 0.812904 | 3.351952e-51 | 2.157575e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021380.01.T01 | MTR_4g072820 | 91.860 | 86 | 7 | 0 | 1 | 86 | 1 | 86 | 1.55e-54 | 164 |
MsG0480021380.01.T01 | MTR_4g072610 | 77.381 | 84 | 18 | 1 | 1 | 84 | 1 | 83 | 3.56e-43 | 135 |
MsG0480021380.01.T01 | MTR_3g084150 | 71.429 | 91 | 19 | 2 | 1 | 85 | 1 | 90 | 1.04e-42 | 134 |
MsG0480021380.01.T01 | MTR_4g072580 | 78.824 | 85 | 16 | 2 | 1 | 84 | 1 | 84 | 1.51e-42 | 133 |
MsG0480021380.01.T01 | MTR_4g072740 | 76.744 | 86 | 18 | 2 | 1 | 85 | 1 | 85 | 1.87e-42 | 133 |
MsG0480021380.01.T01 | MTR_4g072370 | 74.157 | 89 | 18 | 2 | 1 | 85 | 1 | 88 | 3.97e-42 | 132 |
MsG0480021380.01.T01 | MTR_4g072650 | 77.381 | 84 | 18 | 1 | 1 | 84 | 1 | 83 | 4.07e-42 | 132 |
MsG0480021380.01.T01 | MTR_3g084180 | 70.330 | 91 | 20 | 2 | 1 | 85 | 1 | 90 | 9.07e-42 | 132 |
MsG0480021380.01.T01 | MTR_4g072490 | 75.581 | 86 | 19 | 2 | 1 | 85 | 1 | 85 | 1.04e-41 | 131 |
MsG0480021380.01.T01 | MTR_4g072380 | 78.313 | 83 | 17 | 1 | 1 | 82 | 1 | 83 | 3.41e-41 | 130 |
MsG0480021380.01.T01 | MTR_8g461410 | 68.132 | 91 | 22 | 2 | 1 | 85 | 1 | 90 | 3.42e-41 | 130 |
MsG0480021380.01.T01 | MTR_4g072310 | 69.565 | 92 | 20 | 2 | 1 | 85 | 1 | 91 | 6.10e-40 | 127 |
MsG0480021380.01.T01 | MTR_4g072870 | 68.132 | 91 | 23 | 2 | 1 | 85 | 1 | 91 | 6.35e-40 | 127 |
MsG0480021380.01.T01 | MTR_4g072470 | 74.419 | 86 | 20 | 2 | 1 | 85 | 1 | 85 | 6.71e-40 | 127 |
MsG0480021380.01.T01 | MTR_3g084240 | 70.000 | 90 | 22 | 2 | 1 | 85 | 1 | 90 | 1.06e-39 | 126 |
MsG0480021380.01.T01 | MTR_3g110038 | 68.889 | 90 | 23 | 2 | 1 | 85 | 1 | 90 | 1.16e-39 | 126 |
MsG0480021380.01.T01 | MTR_4g072500 | 68.889 | 90 | 23 | 1 | 1 | 85 | 1 | 90 | 1.61e-39 | 126 |
MsG0480021380.01.T01 | MTR_3g084170 | 68.889 | 90 | 23 | 2 | 1 | 85 | 1 | 90 | 4.09e-39 | 125 |
MsG0480021380.01.T01 | MTR_3g110042 | 70.000 | 90 | 20 | 2 | 1 | 84 | 1 | 89 | 5.09e-39 | 125 |
MsG0480021380.01.T01 | MTR_4g072260 | 68.889 | 90 | 22 | 2 | 1 | 84 | 1 | 90 | 5.18e-39 | 125 |
MsG0480021380.01.T01 | MTR_4g072330 | 65.909 | 88 | 27 | 1 | 1 | 85 | 1 | 88 | 6.52e-39 | 124 |
MsG0480021380.01.T01 | MTR_4g072240 | 64.835 | 91 | 26 | 1 | 1 | 85 | 1 | 91 | 6.79e-39 | 124 |
MsG0480021380.01.T01 | MTR_4g072220 | 68.889 | 90 | 22 | 2 | 1 | 84 | 1 | 90 | 6.89e-39 | 124 |
MsG0480021380.01.T01 | MTR_4g072630 | 72.414 | 87 | 21 | 2 | 1 | 85 | 1 | 86 | 1.12e-38 | 124 |
MsG0480021380.01.T01 | MTR_4g072640 | 67.778 | 90 | 24 | 2 | 1 | 85 | 1 | 90 | 3.91e-38 | 122 |
MsG0480021380.01.T01 | MTR_4g072530 | 66.667 | 90 | 25 | 1 | 1 | 85 | 1 | 90 | 3.99e-38 | 122 |
MsG0480021380.01.T01 | MTR_4g050700 | 67.033 | 91 | 24 | 2 | 1 | 85 | 1 | 91 | 6.97e-38 | 122 |
MsG0480021380.01.T01 | MTR_2g012410 | 67.033 | 91 | 24 | 2 | 1 | 85 | 1 | 91 | 6.97e-38 | 122 |
MsG0480021380.01.T01 | MTR_4g072830 | 72.727 | 88 | 19 | 3 | 1 | 84 | 1 | 87 | 9.69e-38 | 121 |
MsG0480021380.01.T01 | MTR_4g072670 | 74.713 | 87 | 19 | 2 | 1 | 85 | 1 | 86 | 1.01e-37 | 121 |
MsG0480021380.01.T01 | MTR_4g072300 | 62.637 | 91 | 28 | 1 | 1 | 85 | 1 | 91 | 1.30e-37 | 121 |
MsG0480021380.01.T01 | MTR_4g072890 | 65.934 | 91 | 25 | 2 | 1 | 85 | 1 | 91 | 1.43e-37 | 121 |
MsG0480021380.01.T01 | MTR_3g084250 | 68.132 | 91 | 22 | 2 | 1 | 85 | 1 | 90 | 1.44e-37 | 121 |
MsG0480021380.01.T01 | MTR_4g072465 | 71.264 | 87 | 22 | 2 | 1 | 85 | 1 | 86 | 1.46e-37 | 121 |
MsG0480021380.01.T01 | MTR_4g072880 | 67.391 | 92 | 22 | 3 | 1 | 85 | 1 | 91 | 1.50e-37 | 121 |
MsG0480021380.01.T01 | MTR_4g072600 | 72.941 | 85 | 21 | 2 | 1 | 84 | 1 | 84 | 1.73e-37 | 120 |
MsG0480021380.01.T01 | MTR_4g072540 | 74.713 | 87 | 19 | 2 | 1 | 85 | 1 | 86 | 4.01e-37 | 120 |
MsG0480021380.01.T01 | MTR_3g084220 | 65.556 | 90 | 26 | 2 | 1 | 85 | 1 | 90 | 5.69e-37 | 119 |
MsG0480021380.01.T01 | MTR_4g072850 | 65.591 | 93 | 23 | 2 | 1 | 85 | 1 | 92 | 6.16e-37 | 119 |
MsG0480021380.01.T01 | MTR_4g072720 | 73.563 | 87 | 20 | 2 | 1 | 85 | 1 | 86 | 6.28e-37 | 119 |
MsG0480021380.01.T01 | MTR_4g072230 | 70.000 | 90 | 17 | 3 | 1 | 83 | 1 | 87 | 1.30e-36 | 119 |
MsG0480021380.01.T01 | MTR_4g072480 | 64.835 | 91 | 25 | 2 | 1 | 85 | 1 | 90 | 1.74e-36 | 118 |
MsG0480021380.01.T01 | MTR_3g084260 | 62.637 | 91 | 28 | 1 | 1 | 85 | 1 | 91 | 1.75e-36 | 118 |
MsG0480021380.01.T01 | MTR_4g072590 | 71.765 | 85 | 24 | 0 | 1 | 85 | 1 | 85 | 1.95e-36 | 118 |
MsG0480021380.01.T01 | MTR_3g117630 | 67.442 | 86 | 21 | 2 | 6 | 85 | 6 | 90 | 3.01e-36 | 118 |
MsG0480021380.01.T01 | MTR_4g072250 | 68.478 | 92 | 20 | 3 | 1 | 85 | 1 | 90 | 4.37e-36 | 117 |
MsG0480021380.01.T01 | MTR_4g072570 | 64.835 | 91 | 25 | 2 | 1 | 85 | 1 | 90 | 5.44e-36 | 117 |
MsG0480021380.01.T01 | MTR_8g461420 | 70.000 | 90 | 22 | 1 | 1 | 85 | 1 | 90 | 5.69e-36 | 117 |
MsG0480021380.01.T01 | MTR_4g072510 | 71.264 | 87 | 22 | 2 | 1 | 85 | 1 | 86 | 1.58e-35 | 115 |
MsG0480021380.01.T01 | MTR_3g084190 | 67.778 | 90 | 24 | 1 | 1 | 85 | 1 | 90 | 2.39e-35 | 115 |
MsG0480021380.01.T01 | MTR_3g110032 | 64.130 | 92 | 25 | 3 | 1 | 85 | 1 | 91 | 2.44e-35 | 115 |
MsG0480021380.01.T01 | MTR_4g072620 | 61.538 | 91 | 28 | 2 | 1 | 85 | 1 | 90 | 3.71e-35 | 115 |
MsG0480021380.01.T01 | MTR_3g084230 | 69.231 | 91 | 21 | 2 | 1 | 85 | 1 | 90 | 4.05e-35 | 115 |
MsG0480021380.01.T01 | MTR_4g072660 | 64.634 | 82 | 29 | 0 | 1 | 82 | 1 | 82 | 5.55e-35 | 114 |
MsG0480021380.01.T01 | MTR_4g072680 | 62.637 | 91 | 27 | 2 | 1 | 85 | 1 | 90 | 6.14e-35 | 114 |
MsG0480021380.01.T01 | MTR_4g072730 | 61.538 | 91 | 28 | 2 | 1 | 85 | 1 | 90 | 7.73e-35 | 114 |
MsG0480021380.01.T01 | MTR_3g084210 | 67.033 | 91 | 23 | 2 | 1 | 85 | 1 | 90 | 8.17e-35 | 114 |
MsG0480021380.01.T01 | MTR_4g072690 | 68.235 | 85 | 27 | 0 | 1 | 85 | 1 | 85 | 1.29e-34 | 113 |
MsG0480021380.01.T01 | MTR_4g072270 | 64.045 | 89 | 24 | 2 | 1 | 82 | 1 | 88 | 1.36e-34 | 114 |
MsG0480021380.01.T01 | MTR_4g072770 | 64.706 | 85 | 25 | 1 | 1 | 85 | 1 | 80 | 1.42e-34 | 113 |
MsG0480021380.01.T01 | MTR_5g008350 | 74.667 | 75 | 17 | 2 | 1 | 74 | 1 | 74 | 3.51e-34 | 112 |
MsG0480021380.01.T01 | MTR_3g110045 | 69.663 | 89 | 20 | 2 | 3 | 85 | 62 | 149 | 7.62e-34 | 114 |
MsG0480021380.01.T01 | MTR_4g072860 | 64.130 | 92 | 25 | 2 | 1 | 85 | 1 | 91 | 1.03e-33 | 111 |
MsG0480021380.01.T01 | MTR_4g072460 | 60.440 | 91 | 29 | 2 | 1 | 85 | 1 | 90 | 1.68e-33 | 111 |
MsG0480021380.01.T01 | MTR_3g084160 | 65.934 | 91 | 24 | 2 | 1 | 85 | 1 | 90 | 5.81e-33 | 109 |
MsG0480021380.01.T01 | MTR_4g072940 | 63.736 | 91 | 24 | 2 | 3 | 85 | 33 | 122 | 1.18e-32 | 110 |
MsG0480021380.01.T01 | MTR_4g072450 | 65.882 | 85 | 29 | 0 | 1 | 85 | 1 | 85 | 1.55e-32 | 108 |
MsG0480021380.01.T01 | MTR_5g008370 | 78.788 | 66 | 14 | 0 | 20 | 85 | 25 | 90 | 1.56e-32 | 110 |
MsG0480021380.01.T01 | MTR_5g008360 | 67.105 | 76 | 24 | 1 | 10 | 85 | 7 | 81 | 8.67e-32 | 106 |
MsG0480021380.01.T01 | MTR_4g072980 | 55.172 | 87 | 38 | 1 | 1 | 86 | 8 | 94 | 1.02e-30 | 104 |
MsG0480021380.01.T01 | MTR_4g072550 | 61.446 | 83 | 28 | 1 | 7 | 85 | 19 | 101 | 2.08e-30 | 103 |
MsG0480021380.01.T01 | MTR_4g072560 | 59.524 | 84 | 31 | 2 | 4 | 86 | 18 | 99 | 6.69e-30 | 102 |
MsG0480021380.01.T01 | MTR_4g072840 | 62.791 | 86 | 7 | 2 | 1 | 86 | 1 | 61 | 1.30e-28 | 97.8 |
MsG0480021380.01.T01 | MTR_4g072910 | 61.538 | 78 | 27 | 1 | 8 | 85 | 26 | 100 | 1.83e-28 | 98.6 |
MsG0480021380.01.T01 | MTR_3g084200 | 68.493 | 73 | 16 | 3 | 1 | 67 | 1 | 72 | 2.22e-28 | 98.6 |
MsG0480021380.01.T01 | MTR_3g117640 | 65.672 | 67 | 22 | 1 | 20 | 85 | 34 | 100 | 4.52e-28 | 97.8 |
MsG0480021380.01.T01 | MTR_4g072290 | 57.647 | 85 | 28 | 1 | 1 | 85 | 1 | 77 | 2.76e-26 | 92.4 |
MsG0480021380.01.T01 | MTR_4g072750 | 65.753 | 73 | 18 | 1 | 1 | 66 | 1 | 73 | 3.18e-26 | 92.4 |
MsG0480021380.01.T01 | MTR_3g110035 | 64.062 | 64 | 23 | 0 | 22 | 85 | 73 | 136 | 4.44e-24 | 88.6 |
MsG0480021380.01.T01 | MTR_3g113310 | 57.576 | 66 | 27 | 1 | 20 | 85 | 42 | 106 | 1.53e-23 | 86.3 |
MsG0480021380.01.T01 | MTR_4g072930 | 52.500 | 80 | 34 | 1 | 10 | 85 | 31 | 110 | 8.98e-23 | 84.7 |
MsG0480021380.01.T01 | MTR_4g072280 | 54.667 | 75 | 28 | 1 | 1 | 69 | 1 | 75 | 7.03e-22 | 81.3 |
MsG0480021380.01.T01 | MTR_3g117610 | 60.317 | 63 | 24 | 1 | 20 | 82 | 45 | 106 | 9.44e-22 | 82.0 |
MsG0480021380.01.T01 | MTR_6g077850 | 56.923 | 65 | 28 | 0 | 20 | 84 | 34 | 98 | 2.55e-21 | 80.5 |
MsG0480021380.01.T01 | MTR_4g072190 | 56.061 | 66 | 28 | 1 | 20 | 85 | 36 | 100 | 6.98e-21 | 79.3 |
MsG0480021380.01.T01 | MTR_8g076040 | 55.385 | 65 | 28 | 1 | 18 | 82 | 39 | 102 | 2.56e-19 | 75.5 |
MsG0480021380.01.T01 | MTR_5g021820 | 47.500 | 80 | 40 | 2 | 7 | 85 | 26 | 104 | 3.46e-19 | 75.1 |
MsG0480021380.01.T01 | MTR_4g124750 | 48.649 | 74 | 37 | 1 | 12 | 85 | 61 | 133 | 4.70e-17 | 71.2 |
MsG0480021380.01.T01 | MTR_2g043960 | 52.239 | 67 | 28 | 2 | 20 | 86 | 76 | 138 | 2.51e-16 | 69.3 |
MsG0480021380.01.T01 | MTR_8g461400 | 44.444 | 90 | 19 | 3 | 1 | 85 | 1 | 64 | 2.66e-16 | 67.0 |
MsG0480021380.01.T01 | MTR_1g009150 | 50.746 | 67 | 32 | 1 | 11 | 77 | 62 | 127 | 4.07e-16 | 69.3 |
MsG0480021380.01.T01 | MTR_4g005310 | 47.059 | 68 | 35 | 1 | 14 | 80 | 56 | 123 | 4.27e-16 | 68.6 |
MsG0480021380.01.T01 | MTR_4g005320 | 50.820 | 61 | 29 | 1 | 17 | 77 | 67 | 126 | 7.16e-15 | 65.9 |
MsG0480021380.01.T01 | MTR_1g094750 | 49.180 | 61 | 30 | 1 | 20 | 80 | 50 | 109 | 9.15e-15 | 64.3 |
MsG0480021380.01.T01 | MTR_1g024085 | 47.826 | 69 | 35 | 1 | 9 | 77 | 26 | 93 | 1.42e-14 | 64.7 |
MsG0480021380.01.T01 | MTR_4g025830 | 44.118 | 68 | 34 | 2 | 20 | 84 | 79 | 145 | 3.15e-14 | 63.9 |
MsG0480021380.01.T01 | MTR_3g109160 | 51.667 | 60 | 28 | 1 | 18 | 77 | 67 | 125 | 1.52e-13 | 62.4 |
MsG0480021380.01.T01 | MTR_7g118010 | 40.741 | 81 | 40 | 3 | 2 | 80 | 10 | 84 | 5.97e-13 | 59.3 |
MsG0480021380.01.T01 | MTR_7g101740 | 47.692 | 65 | 33 | 1 | 18 | 82 | 38 | 101 | 6.24e-13 | 59.7 |
MsG0480021380.01.T01 | MTR_8g461210 | 46.667 | 60 | 31 | 1 | 18 | 77 | 33 | 91 | 2.21e-12 | 58.2 |
MsG0480021380.01.T01 | MTR_1g063950 | 45.902 | 61 | 32 | 1 | 20 | 80 | 48 | 107 | 2.83e-12 | 58.2 |
MsG0480021380.01.T01 | MTR_4g072160 | 48.387 | 62 | 29 | 2 | 20 | 80 | 37 | 96 | 3.38e-12 | 58.2 |
MsG0480021380.01.T01 | MTR_7g104950 | 33.766 | 77 | 50 | 1 | 10 | 86 | 40 | 115 | 4.38e-12 | 57.8 |
MsG0480021380.01.T01 | MTR_3g092220 | 50.000 | 60 | 27 | 2 | 20 | 77 | 33 | 91 | 5.59e-12 | 57.0 |
MsG0480021380.01.T01 | MTR_8g026730 | 44.262 | 61 | 31 | 2 | 19 | 77 | 26 | 85 | 7.00e-12 | 56.6 |
MsG0480021380.01.T01 | MTR_1g059770 | 35.211 | 71 | 45 | 1 | 16 | 86 | 45 | 114 | 8.73e-12 | 57.0 |
MsG0480021380.01.T01 | MTR_3g105900 | 71.429 | 35 | 10 | 0 | 20 | 54 | 1172 | 1206 | 9.55e-12 | 59.3 |
MsG0480021380.01.T01 | MTR_1g061570 | 46.970 | 66 | 34 | 1 | 12 | 77 | 11 | 75 | 9.66e-12 | 56.6 |
MsG0480021380.01.T01 | MTR_2g066830 | 39.706 | 68 | 36 | 2 | 5 | 72 | 47 | 109 | 1.58e-11 | 56.6 |
MsG0480021380.01.T01 | MTR_2g095430 | 40.845 | 71 | 37 | 2 | 7 | 73 | 32 | 101 | 1.73e-11 | 56.2 |
MsG0480021380.01.T01 | MTR_7g405740 | 37.838 | 74 | 45 | 1 | 7 | 80 | 54 | 126 | 2.20e-11 | 56.6 |
MsG0480021380.01.T01 | MTR_4g021810 | 47.761 | 67 | 33 | 2 | 12 | 77 | 18 | 83 | 2.37e-11 | 55.1 |
MsG0480021380.01.T01 | MTR_8g096470 | 43.333 | 60 | 33 | 1 | 21 | 80 | 47 | 105 | 4.90e-11 | 54.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021380.01.T01 | AT5G18050 | 64.474 | 76 | 26 | 1 | 11 | 85 | 15 | 90 | 3.74e-32 | 107 |
MsG0480021380.01.T01 | AT5G18020 | 64.474 | 76 | 26 | 1 | 11 | 85 | 15 | 90 | 4.39e-32 | 107 |
MsG0480021380.01.T01 | AT5G18060 | 64.474 | 76 | 26 | 1 | 11 | 85 | 15 | 90 | 1.32e-31 | 106 |
MsG0480021380.01.T01 | AT4G38840 | 71.642 | 67 | 18 | 1 | 20 | 85 | 33 | 99 | 1.33e-31 | 106 |
MsG0480021380.01.T01 | AT5G18080 | 64.474 | 76 | 26 | 1 | 11 | 85 | 15 | 90 | 1.38e-31 | 106 |
MsG0480021380.01.T01 | AT5G18030 | 58.537 | 82 | 33 | 1 | 5 | 85 | 7 | 88 | 1.91e-30 | 103 |
MsG0480021380.01.T01 | AT5G18010 | 61.842 | 76 | 28 | 1 | 11 | 85 | 15 | 90 | 1.79e-29 | 100 |
MsG0480021380.01.T01 | AT2G21200 | 62.338 | 77 | 27 | 2 | 9 | 84 | 11 | 86 | 2.59e-29 | 100 |
MsG0480021380.01.T01 | AT2G21210 | 55.789 | 95 | 30 | 3 | 1 | 84 | 1 | 94 | 2.80e-29 | 100 |
MsG0480021380.01.T01 | AT4G34810 | 60.976 | 82 | 27 | 2 | 9 | 85 | 37 | 118 | 6.27e-29 | 100 |
MsG0480021380.01.T01 | AT3G03840 | 55.172 | 87 | 31 | 2 | 1 | 85 | 14 | 94 | 8.02e-29 | 99.4 |
MsG0480021380.01.T01 | AT2G21210 | 55.789 | 95 | 30 | 3 | 1 | 84 | 68 | 161 | 1.24e-28 | 100 |
MsG0480021380.01.T01 | AT4G38850 | 59.259 | 81 | 25 | 2 | 8 | 85 | 14 | 89 | 1.51e-28 | 98.6 |
MsG0480021380.01.T01 | AT4G38825 | 61.765 | 68 | 25 | 1 | 19 | 85 | 22 | 89 | 4.97e-28 | 97.4 |
MsG0480021380.01.T01 | AT4G34800 | 55.556 | 90 | 36 | 2 | 1 | 86 | 1 | 90 | 6.25e-28 | 97.1 |
MsG0480021380.01.T01 | AT3G03820 | 53.409 | 88 | 32 | 2 | 1 | 85 | 14 | 95 | 8.32e-28 | 97.1 |
MsG0480021380.01.T01 | AT4G34770 | 62.162 | 74 | 26 | 1 | 13 | 84 | 28 | 101 | 2.12e-27 | 96.3 |
MsG0480021380.01.T01 | AT3G03850 | 55.294 | 85 | 36 | 1 | 3 | 85 | 8 | 92 | 1.22e-26 | 94.0 |
MsG0480021380.01.T01 | AT4G13790 | 50.000 | 80 | 37 | 2 | 8 | 85 | 14 | 92 | 7.52e-25 | 89.4 |
MsG0480021380.01.T01 | AT3G03830 | 60.294 | 68 | 24 | 1 | 21 | 85 | 25 | 92 | 1.31e-24 | 88.6 |
MsG0480021380.01.T01 | AT4G34790 | 60.294 | 68 | 25 | 1 | 20 | 85 | 39 | 106 | 4.34e-23 | 85.5 |
MsG0480021380.01.T01 | AT4G38860 | 57.576 | 66 | 28 | 0 | 20 | 85 | 40 | 105 | 1.53e-22 | 84.0 |
MsG0480021380.01.T01 | AT4G34780 | 50.000 | 80 | 37 | 1 | 9 | 85 | 17 | 96 | 5.72e-22 | 82.4 |
MsG0480021380.01.T01 | AT1G75580 | 59.091 | 66 | 26 | 1 | 20 | 85 | 44 | 108 | 2.78e-21 | 80.9 |
MsG0480021380.01.T01 | AT2G21220 | 55.385 | 65 | 28 | 1 | 20 | 84 | 40 | 103 | 2.05e-20 | 78.6 |
MsG0480021380.01.T01 | AT4G34760 | 54.545 | 66 | 29 | 1 | 20 | 85 | 43 | 107 | 3.19e-20 | 78.2 |
MsG0480021380.01.T01 | AT2G16580 | 54.545 | 66 | 29 | 1 | 20 | 85 | 44 | 108 | 9.42e-20 | 77.0 |
MsG0480021380.01.T01 | AT1G19830 | 59.701 | 67 | 25 | 2 | 20 | 85 | 48 | 113 | 5.28e-19 | 75.1 |
MsG0480021380.01.T01 | AT4G36110 | 53.846 | 65 | 29 | 1 | 18 | 82 | 38 | 101 | 2.44e-18 | 73.2 |
MsG0480021380.01.T01 | AT2G18010 | 55.556 | 63 | 27 | 1 | 20 | 82 | 48 | 109 | 7.97e-18 | 72.0 |
MsG0480021380.01.T01 | AT3G43120 | 52.239 | 67 | 28 | 2 | 20 | 86 | 79 | 141 | 1.37e-17 | 72.8 |
MsG0480021380.01.T01 | AT5G66260 | 46.753 | 77 | 40 | 1 | 9 | 85 | 23 | 98 | 2.57e-16 | 67.8 |
MsG0480021380.01.T01 | AT5G20810 | 52.239 | 67 | 28 | 2 | 20 | 86 | 79 | 141 | 6.17e-16 | 68.6 |
MsG0480021380.01.T01 | AT3G51200 | 49.254 | 67 | 33 | 1 | 14 | 80 | 34 | 99 | 8.32e-16 | 66.6 |
MsG0480021380.01.T01 | AT5G20810 | 52.239 | 67 | 28 | 2 | 20 | 86 | 79 | 141 | 9.96e-16 | 68.6 |
MsG0480021380.01.T01 | AT3G20220 | 43.662 | 71 | 38 | 2 | 11 | 80 | 38 | 107 | 2.62e-15 | 65.9 |
MsG0480021380.01.T01 | AT3G60690 | 43.662 | 71 | 36 | 2 | 18 | 85 | 86 | 155 | 2.17e-14 | 64.7 |
MsG0480021380.01.T01 | AT2G45210 | 42.466 | 73 | 38 | 2 | 15 | 84 | 74 | 145 | 2.81e-14 | 64.3 |
MsG0480021380.01.T01 | AT5G10990 | 41.573 | 89 | 41 | 3 | 4 | 86 | 29 | 112 | 6.24e-14 | 63.2 |
MsG0480021380.01.T01 | AT2G37030 | 49.180 | 61 | 30 | 1 | 20 | 80 | 49 | 108 | 1.15e-13 | 61.6 |
MsG0480021380.01.T01 | AT4G31320 | 47.143 | 70 | 36 | 1 | 8 | 77 | 68 | 136 | 1.52e-13 | 62.8 |
MsG0480021380.01.T01 | AT2G24400 | 47.143 | 70 | 36 | 1 | 8 | 77 | 52 | 120 | 1.53e-13 | 62.8 |
MsG0480021380.01.T01 | AT1G75590 | 47.059 | 68 | 34 | 2 | 11 | 77 | 32 | 98 | 1.26e-12 | 59.7 |
MsG0480021380.01.T01 | AT4G34750 | 43.284 | 67 | 37 | 1 | 11 | 77 | 28 | 93 | 1.37e-12 | 59.7 |
MsG0480021380.01.T01 | AT4G34750 | 43.284 | 67 | 37 | 1 | 11 | 77 | 28 | 93 | 1.37e-12 | 59.7 |
MsG0480021380.01.T01 | AT3G61900 | 40.845 | 71 | 38 | 2 | 10 | 77 | 20 | 89 | 2.22e-12 | 58.5 |
MsG0480021380.01.T01 | AT1G19840 | 47.143 | 70 | 35 | 2 | 9 | 77 | 29 | 97 | 7.36e-12 | 57.8 |
MsG0480021380.01.T01 | AT2G46690 | 41.096 | 73 | 38 | 3 | 8 | 77 | 13 | 83 | 1.14e-11 | 56.6 |
MsG0480021380.01.T01 | AT1G56150 | 41.270 | 63 | 36 | 1 | 10 | 72 | 28 | 89 | 1.33e-11 | 56.2 |
MsG0480021380.01.T01 | AT3G12830 | 41.429 | 70 | 38 | 2 | 3 | 72 | 35 | 101 | 1.49e-11 | 56.6 |
MsG0480021380.01.T01 | AT4G09530 | 41.429 | 70 | 38 | 2 | 14 | 80 | 22 | 91 | 1.72e-11 | 55.5 |
MsG0480021380.01.T01 | AT4G12410 | 39.189 | 74 | 41 | 2 | 14 | 84 | 70 | 142 | 2.86e-11 | 56.2 |
MsG0480021380.01.T01 | AT3G53250 | 42.623 | 61 | 31 | 1 | 20 | 80 | 52 | 108 | 3.17e-11 | 55.5 |
MsG0480021380.01.T01 | AT4G00880 | 48.387 | 62 | 29 | 2 | 18 | 77 | 26 | 86 | 4.20e-11 | 55.1 |
Find 19 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCAAGCAGAAGAAGAATT+TGG | 0.279041 | 4:-57270959 | MsG0480021380.01.T01:CDS |
CTTTCTTACAACTCTCTTCT+CGG | 0.306926 | 4:-57270889 | MsG0480021380.01.T01:CDS |
TTCGCTTATCTGGTATTAGA+AGG | 0.346910 | 4:-57271108 | MsG0480021380.01.T01:CDS |
TAAACTGCGAGGTAGCCTTT+TGG | 0.378136 | 4:+57271055 | None:intergenic |
AAGCTGGTTCAATATTGAAA+TGG | 0.380921 | 4:+57271000 | None:intergenic |
AGCTGGTTCAATATTGAAAT+GGG | 0.445913 | 4:+57271001 | None:intergenic |
ATTTGGATATGATCATCCTA+TGG | 0.456415 | 4:-57270942 | MsG0480021380.01.T01:CDS |
GTAATTCTTGAAATGAAAGC+TGG | 0.496692 | 4:+57270984 | None:intergenic |
TAAGAAAGCATCTTCACTGC+AGG | 0.497337 | 4:+57270904 | None:intergenic |
TGGGATTGCATCCACAGCCT+TGG | 0.507805 | 4:+57271075 | None:intergenic |
GTCATCATCTTCCAAGGCTG+TGG | 0.512173 | 4:-57271086 | MsG0480021380.01.T01:CDS |
GGCTACCTCGCAGTTTATGT+TGG | 0.513695 | 4:-57271049 | MsG0480021380.01.T01:CDS |
GCTGTGGATGCAATCCCAAA+AGG | 0.559098 | 4:-57271070 | MsG0480021380.01.T01:CDS |
TTTGGATATGATCATCCTAT+GGG | 0.586077 | 4:-57270941 | MsG0480021380.01.T01:CDS |
TAGAAGGTCATCATCTTCCA+AGG | 0.592917 | 4:-57271092 | MsG0480021380.01.T01:CDS |
AAGAAAGCATCTTCACTGCA+GGG | 0.633693 | 4:+57270905 | None:intergenic |
GGATATGATCATCCTATGGG+TGG | 0.645721 | 4:-57270938 | MsG0480021380.01.T01:CDS |
GGAATTGTGAGACCACCCAT+AGG | 0.657747 | 4:+57270926 | None:intergenic |
TTTCTCCAACATAAACTGCG+AGG | 0.736972 | 4:+57271044 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATTTGGATATGATCATCCTA+TGG | - | Chr4:57271050-57271069 | MsG0480021380.01.T01:CDS | 30.0% | |
GTAATTCTTGAAATGAAAGC+TGG | + | Chr4:57271011-57271030 | None:intergenic | 30.0% | |
TTTGGATATGATCATCCTAT+GGG | - | Chr4:57271051-57271070 | MsG0480021380.01.T01:CDS | 30.0% | |
! | AAGCTGGTTCAATATTGAAA+TGG | + | Chr4:57270995-57271014 | None:intergenic | 30.0% |
! | AGCTGGTTCAATATTGAAAT+GGG | + | Chr4:57270994-57271013 | None:intergenic | 30.0% |
CATCAAGCAGAAGAAGAATT+TGG | - | Chr4:57271033-57271052 | MsG0480021380.01.T01:CDS | 35.0% | |
CTTTCTTACAACTCTCTTCT+CGG | - | Chr4:57271103-57271122 | MsG0480021380.01.T01:CDS | 35.0% | |
TTCGCTTATCTGGTATTAGA+AGG | - | Chr4:57270884-57270903 | MsG0480021380.01.T01:CDS | 35.0% | |
TAGAAGGTCATCATCTTCCA+AGG | - | Chr4:57270900-57270919 | MsG0480021380.01.T01:CDS | 40.0% | |
TTTCTCCAACATAAACTGCG+AGG | + | Chr4:57270951-57270970 | None:intergenic | 40.0% | |
!! | AAGAAAGCATCTTCACTGCA+GGG | + | Chr4:57271090-57271109 | None:intergenic | 40.0% |
!! | TAAGAAAGCATCTTCACTGC+AGG | + | Chr4:57271091-57271110 | None:intergenic | 40.0% |
GGATATGATCATCCTATGGG+TGG | - | Chr4:57271054-57271073 | MsG0480021380.01.T01:CDS | 45.0% | |
! | AAACTGCGAGGTAGCCTTTT+GGG | + | Chr4:57270939-57270958 | None:intergenic | 45.0% |
! | TAAACTGCGAGGTAGCCTTT+TGG | + | Chr4:57270940-57270959 | None:intergenic | 45.0% |
GCTGTGGATGCAATCCCAAA+AGG | - | Chr4:57270922-57270941 | MsG0480021380.01.T01:CDS | 50.0% | |
GGAATTGTGAGACCACCCAT+AGG | + | Chr4:57271069-57271088 | None:intergenic | 50.0% | |
GGCTACCTCGCAGTTTATGT+TGG | - | Chr4:57270943-57270962 | MsG0480021380.01.T01:CDS | 50.0% | |
GTCATCATCTTCCAAGGCTG+TGG | - | Chr4:57270906-57270925 | MsG0480021380.01.T01:CDS | 50.0% | |
TGGGATTGCATCCACAGCCT+TGG | + | Chr4:57270920-57270939 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 57270877 | 57271137 | 57270877 | ID=MsG0480021380.01;Name=MsG0480021380.01 |
Chr4 | mRNA | 57270877 | 57271137 | 57270877 | ID=MsG0480021380.01.T01;Parent=MsG0480021380.01;Name=MsG0480021380.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|86 |
Chr4 | exon | 57270877 | 57271137 | 57270877 | ID=MsG0480021380.01.T01:exon:7231;Parent=MsG0480021380.01.T01 |
Chr4 | CDS | 57270877 | 57271137 | 57270877 | ID=MsG0480021380.01.T01:cds;Parent=MsG0480021380.01.T01 |
Gene Sequence |
Protein sequence |