Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014926.01.T01 | XP_013460371.3 | 86.696 | 451 | 48 | 2 | 1 | 451 | 1 | 439 | 0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014926.01.T01 | Q8GYW8 | 38.365 | 477 | 263 | 13 | 1 | 467 | 1 | 456 | 7.67E-86 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014926.01.T01 | A0A072UX90 | 86.696 | 451 | 48 | 2 | 1 | 451 | 1 | 439 | 0.0 | 783 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000292.01 | MsG0380014926.01 | 0.832193 | 1.086924e-55 | 1.206035e-52 |
| MsG0180000404.01 | MsG0380014926.01 | 0.813964 | 1.960204e-51 | 1.298475e-48 |
| MsG0180000782.01 | MsG0380014926.01 | 0.846084 | 2.711500e-59 | 4.613785e-56 |
| MsG0180000785.01 | MsG0380014926.01 | 0.816028 | 6.829831e-52 | 4.785667e-49 |
| MsG0180001085.01 | MsG0380014926.01 | 0.804609 | 1.990329e-49 | 1.030733e-46 |
| MsG0180002929.01 | MsG0380014926.01 | 0.830935 | 2.218861e-55 | 2.372273e-52 |
| MsG0180003741.01 | MsG0380014926.01 | 0.812509 | 4.090701e-51 | 2.605894e-48 |
| MsG0180003906.01 | MsG0380014926.01 | 0.810142 | 1.334894e-50 | 7.984256e-48 |
| MsG0180004103.01 | MsG0380014926.01 | 0.802541 | 5.341263e-49 | 2.623305e-46 |
| MsG0180005039.01 | MsG0380014926.01 | 0.818767 | 1.650606e-52 | 1.246832e-49 |
| MsG0180005113.01 | MsG0380014926.01 | 0.820260 | 7.536519e-53 | 5.933875e-50 |
| MsG0180005485.01 | MsG0380014926.01 | 0.807380 | 5.198685e-50 | 2.891295e-47 |
| MsG0180005807.01 | MsG0380014926.01 | 0.802078 | 6.655111e-49 | 3.230174e-46 |
| MsG0380012208.01 | MsG0380014926.01 | 0.807903 | 4.026924e-50 | 2.270102e-47 |
| MsG0380014926.01 | MsG0380015896.01 | 0.821994 | 3.003381e-53 | 2.482065e-50 |
| MsG0380014926.01 | MsG0380016192.01 | 0.814408 | 1.564600e-51 | 1.049023e-48 |
| MsG0380014926.01 | MsG0380016771.01 | 0.801296 | 9.628935e-49 | 4.582042e-46 |
| MsG0380014926.01 | MsG0380017423.01 | 0.842779 | 2.098929e-58 | 3.216259e-55 |
| MsG0380014926.01 | MsG0480018423.01 | 0.835272 | 1.848457e-56 | 2.249385e-53 |
| MsG0380014926.01 | MsG0480020315.01 | 0.805180 | 1.511832e-49 | 7.945571e-47 |
| MsG0380014926.01 | MsG0480020517.01 | 0.805577 | 1.248478e-49 | 6.628603e-47 |
| MsG0380014926.01 | MsG0480020889.01 | 0.807438 | 5.054608e-50 | 2.815339e-47 |
| MsG0380014926.01 | MsG0480020890.01 | 0.802284 | 6.034609e-49 | 2.944625e-46 |
| MsG0380014926.01 | MsG0480021060.01 | 0.811322 | 7.419842e-51 | 4.578622e-48 |
| MsG0380014926.01 | MsG0480021380.01 | 0.812904 | 3.351952e-51 | 2.157575e-48 |
| MsG0380014926.01 | MsG0480021381.01 | 0.809202 | 2.126104e-50 | 1.240518e-47 |
| MsG0380014926.01 | MsG0480022355.01 | 0.811894 | 5.570325e-51 | 3.489843e-48 |
| MsG0380014926.01 | MsG0580024759.01 | 0.807819 | 4.195421e-50 | 2.360044e-47 |
| MsG0380014926.01 | MsG0580025411.01 | 0.803138 | 4.022894e-49 | 2.006021e-46 |
| MsG0380014926.01 | MsG0580025607.01 | 0.814614 | 1.408427e-51 | 9.495502e-49 |
| MsG0380014926.01 | MsG0580025668.01 | 0.818237 | 2.177223e-52 | 1.620597e-49 |
| MsG0380014926.01 | MsG0580025828.01 | 0.834242 | 3.357245e-56 | 3.960766e-53 |
| MsG0380014926.01 | MsG0580027655.01 | 0.834677 | 2.610841e-56 | 3.120286e-53 |
| MsG0380014926.01 | MsG0580027763.01 | 0.835351 | 1.764686e-56 | 2.152564e-53 |
| MsG0380014926.01 | MsG0580027826.01 | 0.814864 | 1.240155e-51 | 8.417049e-49 |
| MsG0380014926.01 | MsG0580029529.01 | 0.826791 | 2.235095e-54 | 2.117271e-51 |
| MsG0380014926.01 | MsG0580029736.01 | 0.807084 | 6.007220e-50 | 3.315193e-47 |
| MsG0380014926.01 | MsG0680030328.01 | 0.806849 | 6.736529e-50 | 3.695300e-47 |
| MsG0380014926.01 | MsG0680030784.01 | 0.821984 | 3.018400e-53 | 2.493773e-50 |
| MsG0380014926.01 | MsG0680030908.01 | 0.829256 | 5.699721e-55 | 5.803115e-52 |
| MsG0380014926.01 | MsG0680031959.01 | 0.810412 | 1.167777e-50 | 7.034159e-48 |
| MsG0380014926.01 | MsG0680032832.01 | 0.806590 | 7.641669e-50 | 4.163691e-47 |
| MsG0380014926.01 | MsG0780035992.01 | 0.808805 | 2.585237e-50 | 1.492379e-47 |
| MsG0380014926.01 | MsG0780036307.01 | 0.833754 | 4.446452e-56 | 5.169380e-53 |
| MsG0380014926.01 | MsG0780036517.01 | 0.810588 | 1.069871e-50 | 6.474921e-48 |
| MsG0380014926.01 | MsG0780036757.01 | 0.800389 | 1.474722e-48 | 6.858233e-46 |
| MsG0380014926.01 | MsG0780037341.01 | 0.819168 | 1.338384e-52 | 1.022178e-49 |
| MsG0380014926.01 | MsG0780037395.01 | 0.830833 | 2.350789e-55 | 2.505752e-52 |
| MsG0380014926.01 | MsG0780039186.01 | 0.812115 | 4.987272e-51 | 3.143375e-48 |
| MsG0380014926.01 | MsG0780040388.01 | 0.800480 | 1.413054e-48 | 6.586434e-46 |
| MsG0380014926.01 | MsG0780040430.01 | 0.841539 | 4.469411e-58 | 6.588051e-55 |
| MsG0380014926.01 | MsG0780040431.01 | 0.850213 | 1.963722e-60 | 3.818443e-57 |
| MsG0380014926.01 | MsG0780041259.01 | 0.801035 | 1.088814e-48 | 5.147454e-46 |
| MsG0380014926.01 | MsG0780041699.01 | 0.823209 | 1.566849e-53 | 1.340391e-50 |
| MsG0380014926.01 | MsG0880041834.01 | 0.804733 | 1.874629e-49 | 9.740395e-47 |
| MsG0380014926.01 | MsG0880045558.01 | 0.834982 | 2.187308e-56 | 2.638513e-53 |
| MsG0380014926.01 | MsG0880045668.01 | 0.813977 | 1.947995e-51 | 1.290787e-48 |
| MsG0380014926.01 | MsG0880047538.01 | 0.805528 | 1.278196e-49 | 6.777800e-47 |
| MsG0280007075.01 | MsG0380014926.01 | 0.832821 | 7.593694e-56 | 8.584873e-53 |
| MsG0280007309.01 | MsG0380014926.01 | 0.801265 | 9.768136e-49 | 4.644608e-46 |
| MsG0280007750.01 | MsG0380014926.01 | 0.821515 | 3.875761e-53 | 3.159814e-50 |
| MsG0280008110.01 | MsG0380014926.01 | 0.803553 | 3.299290e-49 | 1.662974e-46 |
| MsG0280008390.01 | MsG0380014926.01 | 0.830888 | 2.278872e-55 | 2.433047e-52 |
| MsG0280008391.01 | MsG0380014926.01 | 0.808293 | 3.326042e-50 | 1.894533e-47 |
| MsG0280008392.01 | MsG0380014926.01 | 0.824455 | 7.998926e-54 | 7.088080e-51 |
| MsG0280008395.01 | MsG0380014926.01 | 0.813536 | 2.435706e-51 | 1.594906e-48 |
| MsG0280008418.01 | MsG0380014926.01 | 0.809444 | 1.886133e-50 | 1.107587e-47 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014926.01.T01 | MTR_3g465950 | 86.696 | 451 | 48 | 2 | 1 | 451 | 1 | 439 | 0.0 | 783 |
| MsG0380014926.01.T01 | MTR_3g465930 | 79.406 | 471 | 93 | 3 | 1 | 470 | 1 | 468 | 0.0 | 770 |
| MsG0380014926.01.T01 | MTR_3g465910 | 79.914 | 463 | 88 | 3 | 1 | 463 | 1 | 458 | 0.0 | 761 |
| MsG0380014926.01.T01 | MTR_3g465870 | 81.064 | 470 | 48 | 3 | 1 | 470 | 1 | 429 | 0.0 | 750 |
| MsG0380014926.01.T01 | MTR_3g465880 | 70.886 | 474 | 125 | 7 | 1 | 467 | 1 | 468 | 0.0 | 676 |
| MsG0380014926.01.T01 | MTR_3g465980 | 70.021 | 467 | 132 | 4 | 1 | 466 | 1 | 460 | 0.0 | 663 |
| MsG0380014926.01.T01 | MTR_3g465990 | 68.522 | 467 | 139 | 4 | 1 | 466 | 1 | 460 | 0.0 | 655 |
| MsG0380014926.01.T01 | MTR_6g053810 | 58.696 | 460 | 180 | 6 | 9 | 463 | 8 | 462 | 0.0 | 525 |
| MsG0380014926.01.T01 | MTR_4g055170 | 48.626 | 473 | 216 | 12 | 3 | 466 | 4 | 458 | 2.19e-140 | 411 |
| MsG0380014926.01.T01 | MTR_2g015430 | 30.635 | 457 | 287 | 17 | 12 | 461 | 2 | 435 | 2.58e-54 | 188 |
| MsG0380014926.01.T01 | MTR_1g040175 | 31.143 | 350 | 217 | 12 | 8 | 350 | 5 | 337 | 1.40e-35 | 137 |
| MsG0380014926.01.T01 | MTR_1g053315 | 28.747 | 487 | 272 | 23 | 7 | 460 | 13 | 457 | 1.93e-34 | 134 |
| MsG0380014926.01.T01 | MTR_7g027175 | 30.585 | 376 | 222 | 14 | 8 | 370 | 13 | 362 | 2.64e-33 | 131 |
| MsG0380014926.01.T01 | MTR_7g110610 | 29.794 | 339 | 174 | 10 | 19 | 351 | 12 | 292 | 4.07e-33 | 129 |
| MsG0380014926.01.T01 | MTR_3g071320 | 28.117 | 409 | 258 | 13 | 12 | 403 | 5 | 394 | 2.53e-31 | 125 |
| MsG0380014926.01.T01 | MTR_8g096530 | 28.912 | 377 | 224 | 14 | 10 | 370 | 5 | 353 | 1.27e-30 | 123 |
| MsG0380014926.01.T01 | MTR_1g081660 | 26.932 | 453 | 294 | 13 | 21 | 463 | 22 | 447 | 2.95e-30 | 122 |
| MsG0380014926.01.T01 | MTR_1g040215 | 27.859 | 341 | 218 | 10 | 19 | 350 | 16 | 337 | 1.15e-29 | 121 |
| MsG0380014926.01.T01 | MTR_7g114550 | 28.107 | 338 | 222 | 8 | 19 | 350 | 17 | 339 | 3.87e-28 | 116 |
| MsG0380014926.01.T01 | MTR_7g114520 | 28.857 | 350 | 232 | 9 | 6 | 350 | 5 | 342 | 1.17e-27 | 115 |
| MsG0380014926.01.T01 | MTR_5g076700 | 27.066 | 351 | 238 | 7 | 6 | 351 | 4 | 341 | 2.62e-27 | 114 |
| MsG0380014926.01.T01 | MTR_3g098980 | 27.838 | 370 | 236 | 13 | 10 | 370 | 12 | 359 | 4.73e-27 | 113 |
| MsG0380014926.01.T01 | MTR_7g114560 | 26.934 | 349 | 238 | 8 | 6 | 350 | 4 | 339 | 3.11e-25 | 108 |
| MsG0380014926.01.T01 | MTR_8g075610 | 27.731 | 357 | 236 | 12 | 19 | 371 | 1 | 339 | 1.53e-24 | 105 |
| MsG0380014926.01.T01 | MTR_7g114490 | 26.216 | 370 | 254 | 8 | 6 | 371 | 4 | 358 | 1.30e-23 | 103 |
| MsG0380014926.01.T01 | MTR_2g105330 | 26.158 | 367 | 236 | 13 | 12 | 367 | 3 | 345 | 1.34e-23 | 103 |
| MsG0380014926.01.T01 | MTR_2g064495 | 26.431 | 367 | 235 | 13 | 12 | 367 | 3 | 345 | 1.62e-23 | 102 |
| MsG0380014926.01.T01 | MTR_7g114470 | 26.629 | 353 | 236 | 11 | 6 | 350 | 5 | 342 | 2.19e-23 | 102 |
| MsG0380014926.01.T01 | MTR_1g040320 | 29.769 | 346 | 191 | 12 | 8 | 350 | 5 | 301 | 3.67e-23 | 101 |
| MsG0380014926.01.T01 | MTR_4g007540 | 26.738 | 374 | 226 | 14 | 12 | 367 | 3 | 346 | 1.22e-22 | 100 |
| MsG0380014926.01.T01 | MTR_1g040315 | 28.617 | 311 | 192 | 10 | 19 | 321 | 16 | 304 | 2.47e-22 | 99.4 |
| MsG0380014926.01.T01 | MTR_3g112180 | 24.878 | 410 | 246 | 13 | 20 | 406 | 20 | 390 | 4.87e-22 | 99.0 |
| MsG0380014926.01.T01 | MTR_3g026950 | 24.634 | 410 | 255 | 18 | 20 | 409 | 10 | 385 | 5.86e-22 | 98.6 |
| MsG0380014926.01.T01 | MTR_4g127650 | 28.329 | 353 | 218 | 12 | 11 | 348 | 9 | 341 | 3.52e-20 | 93.2 |
| MsG0380014926.01.T01 | MTR_3g049150 | 25.815 | 368 | 233 | 16 | 14 | 364 | 4 | 348 | 4.69e-20 | 92.8 |
| MsG0380014926.01.T01 | MTR_4g097090 | 28.094 | 299 | 177 | 9 | 69 | 349 | 64 | 342 | 2.94e-19 | 90.5 |
| MsG0380014926.01.T01 | MTR_7g085930 | 27.056 | 377 | 231 | 19 | 19 | 371 | 13 | 369 | 6.74e-19 | 89.4 |
| MsG0380014926.01.T01 | MTR_7g086000 | 26.301 | 365 | 231 | 12 | 20 | 361 | 12 | 361 | 1.07e-18 | 89.0 |
| MsG0380014926.01.T01 | MTR_7g085990 | 26.862 | 376 | 233 | 17 | 19 | 371 | 9 | 365 | 1.13e-17 | 85.5 |
| MsG0380014926.01.T01 | MTR_4g013050 | 24.302 | 358 | 219 | 10 | 20 | 374 | 12 | 320 | 4.60e-16 | 80.5 |
| MsG0380014926.01.T01 | MTR_0502s0010 | 28.502 | 207 | 128 | 7 | 152 | 350 | 44 | 238 | 8.78e-16 | 77.0 |
| MsG0380014926.01.T01 | MTR_7g084940 | 25.735 | 408 | 256 | 17 | 5 | 397 | 9 | 384 | 1.48e-15 | 79.0 |
| MsG0380014926.01.T01 | MTR_0042s0190 | 29.282 | 181 | 116 | 7 | 174 | 350 | 1 | 173 | 4.96e-14 | 73.2 |
| MsG0380014926.01.T01 | MTR_7g114510 | 24.516 | 310 | 216 | 8 | 156 | 463 | 8 | 301 | 1.11e-13 | 72.4 |
| MsG0380014926.01.T01 | MTR_7g056087 | 23.232 | 396 | 250 | 15 | 11 | 376 | 3 | 374 | 3.99e-13 | 71.6 |
| MsG0380014926.01.T01 | MTR_3g101960 | 25.993 | 277 | 180 | 8 | 71 | 336 | 69 | 331 | 6.71e-12 | 67.8 |
| MsG0380014926.01.T01 | MTR_3g102020 | 25.271 | 277 | 182 | 8 | 71 | 336 | 70 | 332 | 1.38e-11 | 66.6 |
| MsG0380014926.01.T01 | MTR_3g102010 | 25.177 | 282 | 182 | 10 | 70 | 336 | 65 | 332 | 9.08e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014926.01.T01 | AT5G07080 | 37.712 | 472 | 249 | 13 | 6 | 463 | 8 | 448 | 1.03e-87 | 276 |
| MsG0380014926.01.T01 | AT2G25150 | 38.365 | 477 | 263 | 13 | 1 | 467 | 1 | 456 | 7.82e-87 | 274 |
| MsG0380014926.01.T01 | AT2G23510 | 37.969 | 453 | 251 | 13 | 19 | 463 | 20 | 450 | 9.83e-83 | 263 |
| MsG0380014926.01.T01 | AT3G47170 | 35.983 | 478 | 256 | 14 | 12 | 463 | 12 | 465 | 5.28e-78 | 251 |
| MsG0380014926.01.T01 | AT1G28680 | 33.769 | 459 | 274 | 14 | 12 | 461 | 4 | 441 | 2.82e-69 | 228 |
| MsG0380014926.01.T01 | AT1G28680 | 35.657 | 373 | 215 | 12 | 12 | 375 | 4 | 360 | 5.32e-60 | 202 |
| MsG0380014926.01.T01 | AT3G62160 | 30.499 | 341 | 204 | 10 | 18 | 351 | 11 | 325 | 1.79e-36 | 139 |
| MsG0380014926.01.T01 | AT5G41040 | 28.763 | 372 | 237 | 12 | 8 | 370 | 29 | 381 | 8.61e-35 | 135 |
| MsG0380014926.01.T01 | AT5G41040 | 28.763 | 372 | 237 | 12 | 8 | 370 | 13 | 365 | 9.55e-35 | 135 |
| MsG0380014926.01.T01 | AT5G17540 | 28.000 | 375 | 247 | 10 | 8 | 375 | 5 | 363 | 2.06e-29 | 120 |
| MsG0380014926.01.T01 | AT3G03480 | 26.407 | 462 | 306 | 12 | 8 | 463 | 15 | 448 | 6.80e-29 | 119 |
| MsG0380014926.01.T01 | AT2G40230 | 28.426 | 394 | 254 | 12 | 12 | 397 | 5 | 378 | 1.04e-27 | 115 |
| MsG0380014926.01.T01 | AT5G48930 | 27.446 | 368 | 243 | 14 | 10 | 371 | 1 | 350 | 1.62e-26 | 111 |
| MsG0380014926.01.T01 | AT3G48720 | 27.348 | 362 | 239 | 13 | 15 | 370 | 12 | 355 | 9.45e-26 | 109 |
| MsG0380014926.01.T01 | AT1G03390 | 26.402 | 428 | 250 | 18 | 8 | 409 | 13 | 401 | 4.87e-25 | 107 |
| MsG0380014926.01.T01 | AT5G63560 | 27.297 | 370 | 239 | 14 | 8 | 370 | 5 | 351 | 1.88e-23 | 102 |
| MsG0380014926.01.T01 | AT1G27620 | 25.189 | 397 | 244 | 12 | 18 | 397 | 15 | 375 | 1.48e-21 | 97.4 |
| MsG0380014926.01.T01 | AT2G19070 | 27.596 | 366 | 235 | 14 | 20 | 372 | 12 | 360 | 4.44e-21 | 95.9 |
| MsG0380014926.01.T01 | AT5G57840 | 27.660 | 376 | 230 | 19 | 10 | 369 | 1 | 350 | 6.24e-19 | 89.4 |
| MsG0380014926.01.T01 | AT1G24430 | 27.019 | 322 | 191 | 15 | 8 | 320 | 1 | 287 | 1.67e-18 | 88.2 |
| MsG0380014926.01.T01 | AT1G65450 | 27.163 | 416 | 256 | 18 | 2 | 397 | 4 | 392 | 5.91e-17 | 83.6 |
| MsG0380014926.01.T01 | AT4G15390 | 22.946 | 353 | 231 | 14 | 8 | 350 | 4 | 325 | 8.40e-11 | 64.3 |
| MsG0380014926.01.T01 | AT4G15390 | 22.946 | 353 | 231 | 14 | 8 | 350 | 4 | 325 | 8.40e-11 | 64.3 |
Find 90 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTACCTAAAGGGTATTA+TGG | 0.159161 | 3:-62610904 | MsG0380014926.01.T01:CDS |
| TCATTTCTAGCTTTAGGTTT+AGG | 0.176003 | 3:+62612865 | None:intergenic |
| AGGACGAAATTGAAGCTTTA+AGG | 0.184665 | 3:-62610468 | MsG0380014926.01.T01:CDS |
| CATTTCTAGCTTTAGGTTTA+GGG | 0.192317 | 3:+62612866 | None:intergenic |
| ACAATACATGATTCTGATTC+AGG | 0.214559 | 3:-62612720 | MsG0380014926.01.T01:CDS |
| TTGCTCTGAAGATTTGTAAT+TGG | 0.242943 | 3:+62611301 | None:intergenic |
| CCTTTCTTCTCTTCATTACT+TGG | 0.251953 | 3:-62611478 | MsG0380014926.01.T01:CDS |
| CATCTTTCATTTCTAGCTTT+AGG | 0.271621 | 3:+62612859 | None:intergenic |
| TCATGATCATCAAGTTTATT+AGG | 0.273817 | 3:+62610556 | None:intergenic |
| GATTATTATTATCCTCTTGC+AGG | 0.285447 | 3:-62612651 | MsG0380014926.01.T01:intron |
| AAGTTACCCTTTGGTATTCA+TGG | 0.294628 | 3:-62611394 | MsG0380014926.01.T01:CDS |
| CTTTGTGGCGGTTTCACAAT+TGG | 0.320034 | 3:-62611360 | MsG0380014926.01.T01:CDS |
| CACAAACTCAATAAACTCTT+TGG | 0.322202 | 3:-62610761 | MsG0380014926.01.T01:CDS |
| GGTGTTGGTGGTGCAGAATA+TGG | 0.338152 | 3:-62611534 | MsG0380014926.01.T01:CDS |
| GAATTCCCATAATACCCTTT+AGG | 0.340816 | 3:+62610898 | None:intergenic |
| CTTTACCTAAAGGGTATTAT+GGG | 0.352647 | 3:-62610903 | MsG0380014926.01.T01:CDS |
| CATGCTATTTGTGACGCATT+TGG | 0.353743 | 3:-62611324 | MsG0380014926.01.T01:CDS |
| TGCAATTAGCATATGCTTCT+AGG | 0.353944 | 3:+62611502 | None:intergenic |
| GGCGGTTTCACAATTGGAAT+GGG | 0.359194 | 3:-62611354 | MsG0380014926.01.T01:CDS |
| TCTAAGTGAGTTGAGACATT+TGG | 0.363120 | 3:-62610680 | MsG0380014926.01.T01:CDS |
| CTAAGTGAGTTGAGACATTT+GGG | 0.370865 | 3:-62610679 | MsG0380014926.01.T01:CDS |
| TTCAGAGCAATTGTTGAACT+TGG | 0.384460 | 3:-62611288 | MsG0380014926.01.T01:CDS |
| AACTTAGGCATAGCAGCAAC+AGG | 0.385326 | 3:+62610493 | None:intergenic |
| GTTTCTTCACTCGAAGTTGT+AGG | 0.391217 | 3:-62610446 | None:intergenic |
| AGAAGCGGTCTCAAAGGCTT+TGG | 0.391560 | 3:-62612673 | MsG0380014926.01.T01:CDS |
| ATTATGATACTTTACCTAAA+GGG | 0.409088 | 3:-62610912 | MsG0380014926.01.T01:CDS |
| TGCTGCTATGCCTAAGTTCA+AGG | 0.415385 | 3:-62610488 | MsG0380014926.01.T01:CDS |
| GCTTGATATTCCTTATCCTA+TGG | 0.417095 | 3:-62611421 | MsG0380014926.01.T01:CDS |
| CGTCAATGGAAGGAGGAGTT+AGG | 0.418872 | 3:-62610531 | MsG0380014926.01.T01:CDS |
| TATGGATAAAAGTTACCCTT+TGG | 0.446513 | 3:-62611403 | MsG0380014926.01.T01:CDS |
| GTGAAAATGCAACAGATTCT+CGG | 0.449271 | 3:+62611169 | None:intergenic |
| GGAAGACTTAGAGTCGAGTT+TGG | 0.454551 | 3:-62611555 | MsG0380014926.01.T01:CDS |
| TCAATTTCGTCCTTGAACTT+AGG | 0.461185 | 3:+62610478 | None:intergenic |
| TGGCGGTTTCACAATTGGAA+TGG | 0.467227 | 3:-62611355 | MsG0380014926.01.T01:CDS |
| CTAACTCCTCCTTCCATTGA+CGG | 0.469333 | 3:+62610532 | None:intergenic |
| TCCCACACAGGTTTCACTGA+TGG | 0.471401 | 3:+62611249 | None:intergenic |
| TGCAACAGATTCTCGGTCAG+TGG | 0.476338 | 3:+62611176 | None:intergenic |
| CCAAGCATCTTGCATGGTGC+AGG | 0.480198 | 3:+62610607 | None:intergenic |
| AAGTTGCGTCTAATACCAAC+TGG | 0.480983 | 3:+62610940 | None:intergenic |
| GATTATGATACTTTACCTAA+AGG | 0.489847 | 3:-62610913 | MsG0380014926.01.T01:CDS |
| CCAAGTAATGAAGAGAAGAA+AGG | 0.491172 | 3:+62611478 | None:intergenic |
| TGGTATTAGACGCAACTTGA+AGG | 0.491366 | 3:-62610935 | MsG0380014926.01.T01:CDS |
| TTGGAGACGAATCAAGAAGA+TGG | 0.503936 | 3:-62610742 | MsG0380014926.01.T01:CDS |
| CTCGGTCAGTGGGACATTGT+GGG | 0.504074 | 3:+62611187 | None:intergenic |
| AGCATGGAATTGGAAGATAG+TGG | 0.504909 | 3:-62610715 | MsG0380014926.01.T01:CDS |
| GCAATTGTTGAACTTGGAAG+AGG | 0.508018 | 3:-62611282 | MsG0380014926.01.T01:CDS |
| CAAGTAATGAAGAGAAGAAA+GGG | 0.508480 | 3:+62611479 | None:intergenic |
| TTAGCATATGCTTCTAGGAA+TGG | 0.521867 | 3:+62611507 | None:intergenic |
| TGATGATCATGATCCGTCAA+TGG | 0.524460 | 3:-62610545 | MsG0380014926.01.T01:CDS |
| CTTAGAGTCGAGTTTGGTGT+TGG | 0.525295 | 3:-62611549 | MsG0380014926.01.T01:CDS |
| TCTCGGTCAGTGGGACATTG+TGG | 0.526038 | 3:+62611186 | None:intergenic |
| CCTGCACCATGCAAGATGCT+TGG | 0.531684 | 3:-62610607 | MsG0380014926.01.T01:CDS |
| AGCTTAACAATTTCATAGAG+TGG | 0.539783 | 3:+62610826 | None:intergenic |
| ATTTCTAGCTTTAGGTTTAG+GGG | 0.543168 | 3:+62612867 | None:intergenic |
| ATGGTGACAAAATTTCTTTG+TGG | 0.543302 | 3:-62611375 | MsG0380014926.01.T01:CDS |
| GGAAGATAGTGGTGCAGTAA+CGG | 0.543611 | 3:-62610704 | MsG0380014926.01.T01:CDS |
| CACAGAAATTGCAAAAGACT+TGG | 0.546007 | 3:-62611445 | MsG0380014926.01.T01:CDS |
| GACAGAGAAAGAATACAAGA+AGG | 0.550104 | 3:+62612807 | None:intergenic |
| AGAGTCGAGTTTGGTGTTGG+TGG | 0.551439 | 3:-62611546 | MsG0380014926.01.T01:CDS |
| TTGTCACCATGAATACCAAA+GGG | 0.551952 | 3:+62611388 | None:intergenic |
| GCGGTTTCACAATTGGAATG+GGG | 0.553602 | 3:-62611353 | MsG0380014926.01.T01:CDS |
| GCCTTAAAACTTAACAGCAA+TGG | 0.564131 | 3:-62610982 | MsG0380014926.01.T01:CDS |
| TTTGTCACCATGAATACCAA+AGG | 0.565547 | 3:+62611387 | None:intergenic |
| TCAGTGGGACATTGTGGGAA+AGG | 0.570113 | 3:+62611192 | None:intergenic |
| TTTACAAGTATACCTGCAAG+AGG | 0.571753 | 3:+62612639 | None:intergenic |
| AAGTGCTTGCAGGTTATGTG+TGG | 0.575180 | 3:-62611020 | MsG0380014926.01.T01:CDS |
| AATCATGTATTGTTGATGAC+CGG | 0.576588 | 3:+62612730 | None:intergenic |
| CTAGTGAAACATGCTGGTGA+TGG | 0.577908 | 3:-62611576 | MsG0380014926.01.T01:CDS |
| CAAGAAGGAATAGACTTGGA+TGG | 0.586286 | 3:+62612822 | None:intergenic |
| GATCATGATCCGTCAATGGA+AGG | 0.589661 | 3:-62610541 | MsG0380014926.01.T01:CDS |
| GCGTCTAATACCAACTGGAA+TGG | 0.590884 | 3:+62610945 | None:intergenic |
| GCAACAGATTCTCGGTCAGT+GGG | 0.591813 | 3:+62611177 | None:intergenic |
| ATTCAAAGAAGCGGTCTCAA+AGG | 0.594281 | 3:-62612679 | MsG0380014926.01.T01:CDS |
| AATACAAGAAGGAATAGACT+TGG | 0.595657 | 3:+62612818 | None:intergenic |
| GTGACAAAATTTCTTTGTGG+CGG | 0.608273 | 3:-62611372 | MsG0380014926.01.T01:CDS |
| ATGAGAAAATACACGTATCG+AGG | 0.609004 | 3:+62610581 | None:intergenic |
| CGGTTTCACAATTGGAATGG+GGG | 0.610007 | 3:-62611352 | MsG0380014926.01.T01:CDS |
| GGTAGACTAGTGAAACATGC+TGG | 0.615068 | 3:-62611582 | MsG0380014926.01.T01:CDS |
| TTGTCATGTATTCAAAGAAG+CGG | 0.616564 | 3:-62612688 | MsG0380014926.01.T01:CDS |
| GTTTGTGACATAATCAGCAG+TGG | 0.618396 | 3:+62610777 | None:intergenic |
| TGCTTGCAGGTTATGTGTGG+AGG | 0.634525 | 3:-62611017 | MsG0380014926.01.T01:CDS |
| GCTTCTTTGAATACATGACA+AGG | 0.645628 | 3:+62612690 | None:intergenic |
| TGAGAAAATACACGTATCGA+GGG | 0.645992 | 3:+62610582 | None:intergenic |
| AGGGTGCCAAGCATCTTGCA+TGG | 0.649943 | 3:+62610601 | None:intergenic |
| CATGATCCGTCAATGGAAGG+AGG | 0.654273 | 3:-62610538 | MsG0380014926.01.T01:CDS |
| ACAGTGTTGACCATTCCAGT+TGG | 0.658221 | 3:-62610955 | MsG0380014926.01.T01:CDS |
| ACTTAGGCATAGCAGCAACA+GGG | 0.673752 | 3:+62610494 | None:intergenic |
| CTTCTTTGAATACATGACAA+GGG | 0.683868 | 3:+62612691 | None:intergenic |
| AGCCATCAGTGAAACCTGTG+TGG | 0.685980 | 3:-62611251 | MsG0380014926.01.T01:CDS |
| GCCATCAGTGAAACCTGTGT+GGG | 0.717270 | 3:-62611250 | MsG0380014926.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATAAAAATGAAAAAAT+AGG | - | Chr3:62612275-62612294 | MsG0380014926.01.T01:intron | 10.0% |
| !! | TGAATAAAAATGAAAAAATA+GGG | - | Chr3:62612276-62612295 | MsG0380014926.01.T01:intron | 10.0% |
| !! | AATAAATATCATGGTTAATT+CGG | + | Chr3:62610883-62610902 | None:intergenic | 15.0% |
| !! | AATTGATAAAGGAAAAAAAT+TGG | - | Chr3:62611057-62611076 | MsG0380014926.01.T01:CDS | 15.0% |
| !! | CAATTCAAATGTTAAAATAA+AGG | + | Chr3:62611534-62611553 | None:intergenic | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | - | Chr3:62611495-62611514 | MsG0380014926.01.T01:CDS | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | + | Chr3:62611514-62611495 | None:intergenic | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | - | Chr3:62611494-62611513 | MsG0380014926.01.T01:CDS | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | + | Chr3:62611513-62611494 | None:intergenic | 15.0% |
| !!! | TTAATTTTTTGTTACATTGT+TGG | + | Chr3:62610915-62610934 | None:intergenic | 15.0% |
| !!! | TTGAAACTTTTAAAACATAA+GGG | + | Chr3:62611176-62611195 | None:intergenic | 15.0% |
| !! | ATTATGATACTTTACCTAAA+GGG | - | Chr3:62612420-62612439 | MsG0380014926.01.T01:intron | 20.0% |
| !! | GTTACACTTTAAATTGATAA+AGG | - | Chr3:62611046-62611065 | MsG0380014926.01.T01:CDS | 20.0% |
| !! | TATAATGATTAGCAAAAACA+CGG | - | Chr3:62610726-62610745 | MsG0380014926.01.T01:CDS | 20.0% |
| !! | TGTCAATGAAATAAATATCA+TGG | + | Chr3:62610892-62610911 | None:intergenic | 20.0% |
| !! | TTATTTGTATTGAAAGTTGA+TGG | - | Chr3:62611578-62611597 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | ACGTTTTAAAAGTTTCAAAT+TGG | - | Chr3:62611207-62611226 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | AGTATTATTTTGATTCACAA+AGG | + | Chr3:62612189-62612208 | None:intergenic | 20.0% |
| !!! | ATGTTTTAAAAGTTTCAAGT+TGG | - | Chr3:62611178-62611197 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | ATGTTTTAAAAGTTTCAAGT+TGG | + | Chr3:62611197-62611178 | None:intergenic | 20.0% |
| !!! | CAATATTGTTTTAAAGTAGA+GGG | - | Chr3:62612221-62612240 | MsG0380014926.01.T01:intron | 20.0% |
| !!! | CAGGAAAATATAATTTTTGA+AGG | - | Chr3:62612680-62612699 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | CTTGAAACTTTTAAAACATA+AGG | + | Chr3:62611177-62611196 | None:intergenic | 20.0% |
| !!! | GTATTATTTTGATTCACAAA+GGG | + | Chr3:62612188-62612207 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | - | Chr3:62611149-62611168 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | + | Chr3:62611168-62611149 | None:intergenic | 20.0% |
| !!! | GTTTGTTACACTTTTATTTT+AGG | - | Chr3:62611101-62611120 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | TTGAAACTTTTAAAACATGA+AGG | - | Chr3:62611464-62611483 | MsG0380014926.01.T01:CDS | 20.0% |
| !!! | TTGAAACTTTTAAAACGTAA+GGG | + | Chr3:62611205-62611224 | None:intergenic | 20.0% |
| !!! | TTTGAAACTTTTAAAACGTA+AGG | + | Chr3:62611206-62611225 | None:intergenic | 20.0% |
| ! | ATTACAGAAAACGTTGTTTA+AGG | - | Chr3:62610974-62610993 | MsG0380014926.01.T01:CDS | 25.0% |
| ! | CAACGTATGAAAATTATGAA+AGG | - | Chr3:62610787-62610806 | MsG0380014926.01.T01:CDS | 25.0% |
| ! | GATTATGATACTTTACCTAA+AGG | - | Chr3:62612419-62612438 | MsG0380014926.01.T01:intron | 25.0% |
| ! | GGATCTTTAAATTTAAGTGA+CGG | - | Chr3:62611369-62611388 | MsG0380014926.01.T01:CDS | 25.0% |
| ! | GTCACTTAAATTTAAAGATC+CGG | + | Chr3:62611370-62611389 | None:intergenic | 25.0% |
| ! | TCACTTAAATTTAAAGATCC+GGG | + | Chr3:62611369-62611388 | None:intergenic | 25.0% |
| ! | TCATGATCATCAAGTTTATT+AGG | + | Chr3:62612779-62612798 | None:intergenic | 25.0% |
| ! | TCTGTAATAAAGATTGTTGT+TGG | + | Chr3:62610962-62610981 | None:intergenic | 25.0% |
| ! | TTACAGAAAACGTTGTTTAA+GGG | - | Chr3:62610975-62610994 | MsG0380014926.01.T01:CDS | 25.0% |
| ! | TTGAAACTTGGAAAATGTAA+GGG | - | Chr3:62611435-62611454 | MsG0380014926.01.T01:CDS | 25.0% |
| !! | TAACTTTTATCCATAGGATA+AGG | + | Chr3:62611924-62611943 | None:intergenic | 25.0% |
| !!! | AATAACTGCTTTCAGTTTTT+TGG | + | Chr3:62611630-62611649 | None:intergenic | 25.0% |
| !!! | ATAACTGCTTTCAGTTTTTT+GGG | + | Chr3:62611629-62611648 | None:intergenic | 25.0% |
| !!! | GCAATATTGTTTTAAAGTAG+AGG | - | Chr3:62612220-62612239 | MsG0380014926.01.T01:intron | 25.0% |
| AATACAAGAAGGAATAGACT+TGG | + | Chr3:62610517-62610536 | None:intergenic | 30.0% | |
| ACAATACATGATTCTGATTC+AGG | - | Chr3:62610612-62610631 | MsG0380014926.01.T01:CDS | 30.0% | |
| AGCTTAACAATTTCATAGAG+TGG | + | Chr3:62612509-62612528 | None:intergenic | 30.0% | |
| ATGGTGACAAAATTTCTTTG+TGG | - | Chr3:62611957-62611976 | MsG0380014926.01.T01:intron | 30.0% | |
| CAAGTAATGAAGAGAAGAAA+GGG | + | Chr3:62611856-62611875 | None:intergenic | 30.0% | |
| CACAAACTCAATAAACTCTT+TGG | - | Chr3:62612571-62612590 | MsG0380014926.01.T01:intron | 30.0% | |
| CTTCTTTGAATACATGACAA+GGG | + | Chr3:62610644-62610663 | None:intergenic | 30.0% | |
| CTTGAAACTTGGAAAATGTA+AGG | - | Chr3:62611434-62611453 | MsG0380014926.01.T01:CDS | 30.0% | |
| GATTATTATTATCCTCTTGC+AGG | - | Chr3:62610681-62610700 | MsG0380014926.01.T01:CDS | 30.0% | |
| TATGGATAAAAGTTACCCTT+TGG | - | Chr3:62611929-62611948 | MsG0380014926.01.T01:intron | 30.0% | |
| TTAAACTCAATATCATGTCG+CGG | + | Chr3:62611271-62611290 | None:intergenic | 30.0% | |
| TTGTCATGTATTCAAAGAAG+CGG | - | Chr3:62610644-62610663 | MsG0380014926.01.T01:CDS | 30.0% | |
| ! | AAAGGGTAACTTTTATCCAT+AGG | + | Chr3:62611930-62611949 | None:intergenic | 30.0% |
| !! | AATCATGTATTGTTGATGAC+CGG | + | Chr3:62610605-62610624 | None:intergenic | 30.0% |
| !! | ACATTTTCCAAGTTTCAAGT+TGG | + | Chr3:62611433-62611452 | None:intergenic | 30.0% |
| !! | ACCATTGCTGTTAAGTTTTA+AGG | + | Chr3:62612354-62612373 | None:intergenic | 30.0% |
| !! | ACTTTACCTAAAGGGTATTA+TGG | - | Chr3:62612428-62612447 | MsG0380014926.01.T01:intron | 30.0% |
| !! | ATTTCTAGCTTTAGGTTTAG+GGG | + | Chr3:62610468-62610487 | None:intergenic | 30.0% |
| !! | CATCTTTCATTTCTAGCTTT+AGG | + | Chr3:62610476-62610495 | None:intergenic | 30.0% |
| !! | CATTTCTAGCTTTAGGTTTA+GGG | + | Chr3:62610469-62610488 | None:intergenic | 30.0% |
| !! | CTTTACCTAAAGGGTATTAT+GGG | - | Chr3:62612429-62612448 | MsG0380014926.01.T01:intron | 30.0% |
| !! | GTCATTTTGTTCATGTATAC+CGG | - | Chr3:62610583-62610602 | MsG0380014926.01.T01:CDS | 30.0% |
| !! | TCATTTCTAGCTTTAGGTTT+AGG | + | Chr3:62610470-62610489 | None:intergenic | 30.0% |
| !! | TTGCTCTGAAGATTTGTAAT+TGG | + | Chr3:62612034-62612053 | None:intergenic | 30.0% |
| AAGTTACCCTTTGGTATTCA+TGG | - | Chr3:62611938-62611957 | MsG0380014926.01.T01:intron | 35.0% | |
| AATAAAAAGAGCGGAAAGAC+GGG | + | Chr3:62610763-62610782 | None:intergenic | 35.0% | |
| AGGACGAAATTGAAGCTTTA+AGG | - | Chr3:62612864-62612883 | MsG0380014926.01.T01:CDS | 35.0% | |
| ATGAGAAAATACACGTATCG+AGG | + | Chr3:62612754-62612773 | None:intergenic | 35.0% | |
| CAATAAAAAGAGCGGAAAGA+CGG | + | Chr3:62610764-62610783 | None:intergenic | 35.0% | |
| CACAGAAATTGCAAAAGACT+TGG | - | Chr3:62611887-62611906 | MsG0380014926.01.T01:intron | 35.0% | |
| CCAAGTAATGAAGAGAAGAA+AGG | + | Chr3:62611857-62611876 | None:intergenic | 35.0% | |
| CCTTTCTTCTCTTCATTACT+TGG | - | Chr3:62611854-62611873 | MsG0380014926.01.T01:intron | 35.0% | |
| GAATTCCCATAATACCCTTT+AGG | + | Chr3:62612437-62612456 | None:intergenic | 35.0% | |
| GACAGAGAAAGAATACAAGA+AGG | + | Chr3:62610528-62610547 | None:intergenic | 35.0% | |
| GCCTTAAAACTTAACAGCAA+TGG | - | Chr3:62612350-62612369 | MsG0380014926.01.T01:intron | 35.0% | |
| GCTTCTTTGAATACATGACA+AGG | + | Chr3:62610645-62610664 | None:intergenic | 35.0% | |
| GCTTGATATTCCTTATCCTA+TGG | - | Chr3:62611911-62611930 | MsG0380014926.01.T01:intron | 35.0% | |
| GTGAAAATGCAACAGATTCT+CGG | + | Chr3:62612166-62612185 | None:intergenic | 35.0% | |
| GTGACAAAATTTCTTTGTGG+CGG | - | Chr3:62611960-62611979 | MsG0380014926.01.T01:intron | 35.0% | |
| TCAATTTCGTCCTTGAACTT+AGG | + | Chr3:62612857-62612876 | None:intergenic | 35.0% | |
| TGAGAAAATACACGTATCGA+GGG | + | Chr3:62612753-62612772 | None:intergenic | 35.0% | |
| TGCAATTAGCATATGCTTCT+AGG | + | Chr3:62611833-62611852 | None:intergenic | 35.0% | |
| TGGGAAAGAGAAAAACAAGT+TGG | - | Chr3:62612101-62612120 | MsG0380014926.01.T01:intron | 35.0% | |
| TTCAGAGCAATTGTTGAACT+TGG | - | Chr3:62612044-62612063 | MsG0380014926.01.T01:intron | 35.0% | |
| TTGTCACCATGAATACCAAA+GGG | + | Chr3:62611947-62611966 | None:intergenic | 35.0% | |
| TTTACAAGTATACCTGCAAG+AGG | + | Chr3:62610696-62610715 | None:intergenic | 35.0% | |
| TTTGTCACCATGAATACCAA+AGG | + | Chr3:62611948-62611967 | None:intergenic | 35.0% | |
| ! | CTAAGTGAGTTGAGACATTT+GGG | - | Chr3:62612653-62612672 | MsG0380014926.01.T01:CDS | 35.0% |
| ! | TCTAAGTGAGTTGAGACATT+TGG | - | Chr3:62612652-62612671 | MsG0380014926.01.T01:CDS | 35.0% |
| ! | TTAGCATATGCTTCTAGGAA+TGG | + | Chr3:62611828-62611847 | None:intergenic | 35.0% |
| ! | TTCTAACATGAGTACCGTTT+AGG | - | Chr3:62611406-62611425 | MsG0380014926.01.T01:CDS | 35.0% |
| ! | TTTAGGACCAACTTGAAACT+TGG | - | Chr3:62611423-62611442 | MsG0380014926.01.T01:CDS | 35.0% |
| !! | AGTTTCAAGTTGGTCCTAAA+CGG | + | Chr3:62611423-62611442 | None:intergenic | 35.0% |
| !!! | AGATGGTTTTAGCATGGAAT+TGG | - | Chr3:62612607-62612626 | MsG0380014926.01.T01:intron | 35.0% |
| !!! | TCAAGAAGATGGTTTTAGCA+TGG | - | Chr3:62612601-62612620 | MsG0380014926.01.T01:intron | 35.0% |
| AAGTTGCGTCTAATACCAAC+TGG | + | Chr3:62612395-62612414 | None:intergenic | 40.0% | |
| AGCATGGAATTGGAAGATAG+TGG | - | Chr3:62612617-62612636 | MsG0380014926.01.T01:intron | 40.0% | |
| ATTCAAAGAAGCGGTCTCAA+AGG | - | Chr3:62610653-62610672 | MsG0380014926.01.T01:CDS | 40.0% | |
| CAAGAAGGAATAGACTTGGA+TGG | + | Chr3:62610513-62610532 | None:intergenic | 40.0% | |
| CGTTGTCGCAATAAAAAGAG+CGG | + | Chr3:62610772-62610791 | None:intergenic | 40.0% | |
| GCAATTGTTGAACTTGGAAG+AGG | - | Chr3:62612050-62612069 | MsG0380014926.01.T01:intron | 40.0% | |
| GTTCAAAACGTTACTCACGT+TGG | - | Chr3:62611229-62611248 | MsG0380014926.01.T01:CDS | 40.0% | |
| GTTTGTGACATAATCAGCAG+TGG | + | Chr3:62612558-62612577 | None:intergenic | 40.0% | |
| TGATGATCATGATCCGTCAA+TGG | - | Chr3:62612787-62612806 | MsG0380014926.01.T01:CDS | 40.0% | |
| TGGTATTAGACGCAACTTGA+AGG | - | Chr3:62612397-62612416 | MsG0380014926.01.T01:intron | 40.0% | |
| TTGGAGACGAATCAAGAAGA+TGG | - | Chr3:62612590-62612609 | MsG0380014926.01.T01:intron | 40.0% | |
| ! | AAAGATCCGGGTTGACAATA+TGG | + | Chr3:62611357-62611376 | None:intergenic | 40.0% |
| ! | AAGATCCGGGTTGACAATAT+GGG | + | Chr3:62611356-62611375 | None:intergenic | 40.0% |
| ! | CATGCTATTTGTGACGCATT+TGG | - | Chr3:62612008-62612027 | MsG0380014926.01.T01:intron | 40.0% |
| ! | CATGTTTCACTAGTCTACCT+GGG | + | Chr3:62611749-62611768 | None:intergenic | 40.0% |
| ! | TGTTTTTCTCTTTCCCACAC+AGG | + | Chr3:62612098-62612117 | None:intergenic | 40.0% |
| !! | GAAGTGAGATGTTGGTTTAG+TGG | + | Chr3:62611722-62611741 | None:intergenic | 40.0% |
| !! | GTTGAGACATTTGGGTTTTC+AGG | - | Chr3:62612661-62612680 | MsG0380014926.01.T01:CDS | 40.0% |
| !!! | ACAACTTTTGAAGTGCTTGC+AGG | - | Chr3:62612302-62612321 | MsG0380014926.01.T01:intron | 40.0% |
| !!! | CTGCTTTCAGTTTTTTGGGT+TGG | + | Chr3:62611625-62611644 | None:intergenic | 40.0% |
| AACATCTCACTTCGTTTCCC+AGG | - | Chr3:62611729-62611748 | MsG0380014926.01.T01:intron | 45.0% | |
| AACTTAGGCATAGCAGCAAC+AGG | + | Chr3:62612842-62612861 | None:intergenic | 45.0% | |
| AAGTGCTTGCAGGTTATGTG+TGG | - | Chr3:62612312-62612331 | MsG0380014926.01.T01:intron | 45.0% | |
| ACTCAATATCATGTCGCGGA+AGG | + | Chr3:62611267-62611286 | None:intergenic | 45.0% | |
| ACTTAGGCATAGCAGCAACA+GGG | + | Chr3:62612841-62612860 | None:intergenic | 45.0% | |
| CATCACCCATATTGTCAACC+CGG | - | Chr3:62611348-62611367 | MsG0380014926.01.T01:CDS | 45.0% | |
| CGGTTTCACAATTGGAATGG+GGG | - | Chr3:62611980-62611999 | MsG0380014926.01.T01:intron | 45.0% | |
| CTAACTCCTCCTTCCATTGA+CGG | + | Chr3:62612803-62612822 | None:intergenic | 45.0% | |
| CTAGTGAAACATGCTGGTGA+TGG | - | Chr3:62611756-62611775 | MsG0380014926.01.T01:intron | 45.0% | |
| CTCAATATCATGTCGCGGAA+GGG | + | Chr3:62611266-62611285 | None:intergenic | 45.0% | |
| CTTTGTGGCGGTTTCACAAT+TGG | - | Chr3:62611972-62611991 | MsG0380014926.01.T01:intron | 45.0% | |
| GATCATGATCCGTCAATGGA+AGG | - | Chr3:62612791-62612810 | MsG0380014926.01.T01:CDS | 45.0% | |
| GCGGTTTCACAATTGGAATG+GGG | - | Chr3:62611979-62611998 | MsG0380014926.01.T01:intron | 45.0% | |
| GCGTCTAATACCAACTGGAA+TGG | + | Chr3:62612390-62612409 | None:intergenic | 45.0% | |
| GGAAGACTTAGAGTCGAGTT+TGG | - | Chr3:62611777-62611796 | MsG0380014926.01.T01:intron | 45.0% | |
| GGCGGTTTCACAATTGGAAT+GGG | - | Chr3:62611978-62611997 | MsG0380014926.01.T01:intron | 45.0% | |
| GGTAGACTAGTGAAACATGC+TGG | - | Chr3:62611750-62611769 | MsG0380014926.01.T01:intron | 45.0% | |
| TGCTGCTATGCCTAAGTTCA+AGG | - | Chr3:62612844-62612863 | MsG0380014926.01.T01:CDS | 45.0% | |
| TGGCGGTTTCACAATTGGAA+TGG | - | Chr3:62611977-62611996 | MsG0380014926.01.T01:intron | 45.0% | |
| TGGGAAACGAAGTGAGATGT+TGG | + | Chr3:62611730-62611749 | None:intergenic | 45.0% | |
| ! | GCATGTTTCACTAGTCTACC+TGG | + | Chr3:62611750-62611769 | None:intergenic | 45.0% |
| ! | GGAAGATAGTGGTGCAGTAA+CGG | - | Chr3:62612628-62612647 | MsG0380014926.01.T01:intron | 45.0% |
| !! | ACAGTGTTGACCATTCCAGT+TGG | - | Chr3:62612377-62612396 | MsG0380014926.01.T01:intron | 45.0% |
| !! | CTTAGAGTCGAGTTTGGTGT+TGG | - | Chr3:62611783-62611802 | MsG0380014926.01.T01:intron | 45.0% |
| AGAAGCGGTCTCAAAGGCTT+TGG | - | Chr3:62610659-62610678 | MsG0380014926.01.T01:CDS | 50.0% | |
| AGCCATCAGTGAAACCTGTG+TGG | - | Chr3:62612081-62612100 | MsG0380014926.01.T01:intron | 50.0% | |
| CATGATCCGTCAATGGAAGG+AGG | - | Chr3:62612794-62612813 | MsG0380014926.01.T01:CDS | 50.0% | |
| CGTCAATGGAAGGAGGAGTT+AGG | - | Chr3:62612801-62612820 | MsG0380014926.01.T01:CDS | 50.0% | |
| GCAACAGATTCTCGGTCAGT+GGG | + | Chr3:62612158-62612177 | None:intergenic | 50.0% | |
| GCCATCAGTGAAACCTGTGT+GGG | - | Chr3:62612082-62612101 | MsG0380014926.01.T01:intron | 50.0% | |
| TCAGTGGGACATTGTGGGAA+AGG | + | Chr3:62612143-62612162 | None:intergenic | 50.0% | |
| TCCCACACAGGTTTCACTGA+TGG | + | Chr3:62612086-62612105 | None:intergenic | 50.0% | |
| TGCAACAGATTCTCGGTCAG+TGG | + | Chr3:62612159-62612178 | None:intergenic | 50.0% | |
| TGCTTGCAGGTTATGTGTGG+AGG | - | Chr3:62612315-62612334 | MsG0380014926.01.T01:intron | 50.0% | |
| ! | CGGGTTGACAATATGGGTGA+TGG | + | Chr3:62611350-62611369 | None:intergenic | 50.0% |
| !! | AGAGTCGAGTTTGGTGTTGG+TGG | - | Chr3:62611786-62611805 | MsG0380014926.01.T01:intron | 50.0% |
| !! | GGTGTTGGTGGTGCAGAATA+TGG | - | Chr3:62611798-62611817 | MsG0380014926.01.T01:intron | 50.0% |
| CCAAGCATCTTGCATGGTGC+AGG | + | Chr3:62612728-62612747 | None:intergenic | 55.0% | |
| CCTGCACCATGCAAGATGCT+TGG | - | Chr3:62612725-62612744 | MsG0380014926.01.T01:CDS | 55.0% | |
| CTCGGTCAGTGGGACATTGT+GGG | + | Chr3:62612148-62612167 | None:intergenic | 55.0% | |
| TCTCGGTCAGTGGGACATTG+TGG | + | Chr3:62612149-62612168 | None:intergenic | 55.0% | |
| ! | AGGGTGCCAAGCATCTTGCA+TGG | + | Chr3:62612734-62612753 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 62610447 | 62612907 | 62610447 | ID=MsG0380014926.01;Name=MsG0380014926.01 |
| Chr3 | mRNA | 62610447 | 62612907 | 62610447 | ID=MsG0380014926.01.T01;Parent=MsG0380014926.01;Name=MsG0380014926.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|2|0|470 |
| Chr3 | exon | 62612652 | 62612907 | 62612652 | ID=MsG0380014926.01.T01:exon:29543;Parent=MsG0380014926.01.T01 |
| Chr3 | exon | 62610447 | 62611603 | 62610447 | ID=MsG0380014926.01.T01:exon:29542;Parent=MsG0380014926.01.T01 |
| Chr3 | CDS | 62612652 | 62612907 | 62612652 | ID=MsG0380014926.01.T01:cds;Parent=MsG0380014926.01.T01 |
| Chr3 | CDS | 62610447 | 62611603 | 62610447 | ID=MsG0380014926.01.T01:cds;Parent=MsG0380014926.01.T01 |
| Gene Sequence |
| Protein sequence |
