AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022420.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022420.01.T01 MTR_4g089100 97.268 183 5 0 26 208 1 183 2.92e-129 361
MsG0480022420.01.T01 MTR_2g079830 59.649 171 68 1 26 195 1 171 1.82e-61 190
MsG0480022420.01.T01 MTR_5g057670 47.273 165 86 1 28 191 7 171 3.41e-52 166
MsG0480022420.01.T01 MTR_5g057335 47.273 165 86 1 28 191 7 171 3.41e-52 166
MsG0480022420.01.T01 MTR_1g109660 43.976 166 92 1 28 192 4 169 2.44e-42 141
MsG0480022420.01.T01 MTR_1g109700 39.521 167 99 2 24 190 1 165 1.04e-32 117
MsG0480022420.01.T01 MTR_4g077250 27.607 163 114 3 34 195 11 170 2.45e-12 63.9
MsG0480022420.01.T01 MTR_1g109690 34.000 100 64 2 24 123 1 98 8.40e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022420.01.T01 AT1G61065 66.667 183 58 2 26 208 1 180 4.26e-75 224
MsG0480022420.01.T01 AT4G27435 58.382 173 71 1 26 197 1 173 4.18e-71 214
MsG0480022420.01.T01 AT1G52910 52.874 174 80 2 26 197 1 174 3.38e-63 194
MsG0480022420.01.T01 AT3G15480 50.867 173 83 2 26 196 1 173 2.75e-59 184
MsG0480022420.01.T01 AT1G13380 45.029 171 88 3 27 196 6 171 2.66e-45 149
MsG0480022420.01.T01 AT1G68220 39.326 178 105 3 26 200 1 178 6.79e-37 128
MsG0480022420.01.T01 AT5G17210 29.379 177 116 5 34 205 11 183 3.75e-14 68.9

Find 75 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGGTCTTTAATTAAATT+TGG 0.118983 4:-72314370 MsG0480022420.01.T01:three_prime_UTR
TATGGCTTCTTCTCTGTTAC+TGG 0.161308 4:-72318551 MsG0480022420.01.T01:CDS
ACTTTCTACCTTCAGTGTTT+TGG 0.167759 4:+72315650 None:intergenic
CACAAAGTATAGAGATTTAT+TGG 0.188851 4:-72314709 MsG0480022420.01.T01:CDS
ACCTTGAGGAAAGGAGTATT+TGG 0.252984 4:-72314663 MsG0480022420.01.T01:CDS
TTGTGATTCTTACTTCTTAT+AGG 0.263046 4:+72314270 None:intergenic
TTCTTCTCTGTTACTGGTTG+TGG 0.346559 4:-72318545 MsG0480022420.01.T01:CDS
TATTAACTTGGCTTATTACA+TGG 0.364738 4:-72314461 MsG0480022420.01.T01:three_prime_UTR
CGGCCACCACCTCCATCAAC+GGG 0.375088 4:+72319649 None:intergenic
TTCCTCAAGGTTTGACATGA+AGG 0.384581 4:+72314675 None:intergenic
TTGCCACCGGCCTAGGTGTT+GGG 0.395204 4:-72315606 MsG0480022420.01.T01:CDS
TCTGACATTGCCACCGGCCT+AGG 0.400328 4:-72315613 MsG0480022420.01.T01:CDS
AATGTATCCAACTTGGGACT+TGG 0.402924 4:-72314499 MsG0480022420.01.T01:three_prime_UTR
TAAACAAATTGCCCATGATC+TGG 0.409000 4:+72315495 None:intergenic
ACAAAGTATAGAGATTTATT+GGG 0.411928 4:-72314708 MsG0480022420.01.T01:CDS
TGATTCTTACTTCTTATAGG+TGG 0.421449 4:+72314273 None:intergenic
GATTCTTACTTCTTATAGGT+GGG 0.422098 4:+72314274 None:intergenic
ATTGCCACCGGCCTAGGTGT+TGG 0.437881 4:-72315607 MsG0480022420.01.T01:CDS
TGCAAGTCAAGTGATCATTA+TGG 0.441738 4:-72315566 MsG0480022420.01.T01:CDS
GTCGTCTCCTCCTCAGATTT+CGG 0.445688 4:+72319629 None:intergenic
GTTATGAGGTGCCCCGTTGA+TGG 0.449217 4:-72319661 MsG0480022420.01.T01:CDS
GACCTAGTGGATCCAGATCA+TGG 0.481470 4:-72315507 MsG0480022420.01.T01:CDS
ATTCTTACTTCTTATAGGTG+GGG 0.491177 4:+72314275 None:intergenic
CTGTTGCTGCTGAGCAGAGA+AGG 0.494310 4:-72318489 MsG0480022420.01.T01:CDS
TTTGTTTAGAGTTTAGACTA+TGG 0.496787 4:-72314387 MsG0480022420.01.T01:three_prime_UTR
TCGGCCACCACCTCCATCAA+CGG 0.511798 4:+72319648 None:intergenic
GACTTGCAACAAGGATAAAG+AGG 0.511852 4:+72315581 None:intergenic
AATGCGCAATGTATCCAACT+TGG 0.519984 4:-72314506 MsG0480022420.01.T01:three_prime_UTR
AGGAAAGGAGTATTTGGAGC+TGG 0.522435 4:-72314657 MsG0480022420.01.T01:CDS
GCTGCGTCATGTCTTCTAGC+GGG 0.522839 4:-72314753 MsG0480022420.01.T01:CDS
TAACTAGATGCTTGTGCTGT+GGG 0.523620 4:-72315540 MsG0480022420.01.T01:CDS
CTACTTGTAATTATGAAGCT+AGG 0.525615 4:-72314421 MsG0480022420.01.T01:three_prime_UTR
TCCAAATACTCCTTTCCTCA+AGG 0.531125 4:+72314662 None:intergenic
ATGTATCCAACTTGGGACTT+GGG 0.532989 4:-72314498 MsG0480022420.01.T01:three_prime_UTR
TGCCCCGTTGATGGAGGTGG+TGG 0.534564 4:-72319652 MsG0480022420.01.T01:CDS
CTTCCTCCCAAGTCCCAAGT+TGG 0.537272 4:+72314492 None:intergenic
GAAGTGTGTTACTATTAACT+TGG 0.539644 4:-72314473 MsG0480022420.01.T01:three_prime_UTR
AGGTGCCCCGTTGATGGAGG+TGG 0.541019 4:-72319655 MsG0480022420.01.T01:CDS
AGATCTTGAGCTGATAGCTA+TGG 0.543948 4:-72318569 MsG0480022420.01.T01:CDS
TATTACATGGATGTGAATTG+TGG 0.545400 4:-72314448 MsG0480022420.01.T01:three_prime_UTR
ATTACATGGATGTGAATTGT+GGG 0.545568 4:-72314447 MsG0480022420.01.T01:three_prime_UTR
GAGGGACCCAACACCTAGGC+CGG 0.547158 4:+72315600 None:intergenic
TTTGTTTATTCATCGCTACC+TGG 0.550793 4:-72315480 MsG0480022420.01.T01:intron
TTAAATTTACAAATTACTCA+TGG 0.553734 4:+72314527 None:intergenic
GTAACTAGATGCTTGTGCTG+TGG 0.554303 4:-72315541 MsG0480022420.01.T01:CDS
TGCTGCGTCATGTCTTCTAG+CGG 0.556620 4:-72314754 MsG0480022420.01.T01:CDS
TCTGGATCCACTAGGTCTCA+TGG 0.558877 4:+72315513 None:intergenic
ACCTAGTGGATCCAGATCAT+GGG 0.563046 4:-72315506 MsG0480022420.01.T01:CDS
CACACCTGTGTCTCTAGCAT+AGG 0.565825 4:+72314551 None:intergenic
AATCACAATGGAGGGTAGGA+TGG 0.567785 4:-72314255 MsG0480022420.01.T01:three_prime_UTR
ATGCGCAATGTATCCAACTT+GGG 0.569075 4:-72314505 MsG0480022420.01.T01:three_prime_UTR
ACACCTGTGTCTCTAGCATA+GGG 0.569459 4:+72314552 None:intergenic
TAAGAATCACAATGGAGGGT+AGG 0.573015 4:-72314259 MsG0480022420.01.T01:three_prime_UTR
GAAGTAAGAATCACAATGGA+GGG 0.576683 4:-72314263 MsG0480022420.01.T01:three_prime_UTR
ATAAATCTCTATACTTTGTG+TGG 0.577844 4:+72314712 None:intergenic
TATGATTCTGACATTGCCAC+CGG 0.606011 4:-72315619 MsG0480022420.01.T01:CDS
AGAAGTAAGAATCACAATGG+AGG 0.607905 4:-72314264 MsG0480022420.01.T01:three_prime_UTR
TCATGTCAAACCTTGAGGAA+AGG 0.610389 4:-72314672 MsG0480022420.01.T01:CDS
CACCTTCATGTCAAACCTTG+AGG 0.611145 4:-72314677 MsG0480022420.01.T01:CDS
CCTCCCTATGCTAGAGACAC+AGG 0.615801 4:-72314555 MsG0480022420.01.T01:CDS
GGGAGAGCCATGAGACCTAG+TGG 0.628075 4:-72315520 MsG0480022420.01.T01:CDS
TATCCAACTTGGGACTTGGG+AGG 0.630357 4:-72314495 MsG0480022420.01.T01:three_prime_UTR
GGACCCAACACCTAGGCCGG+TGG 0.639370 4:+72315603 None:intergenic
ACTTGCAACAAGGATAAAGA+GGG 0.642274 4:+72315582 None:intergenic
ATGAGGTGCCCCGTTGATGG+AGG 0.645354 4:-72319658 MsG0480022420.01.T01:CDS
CTGTGTCTCTAGCATAGGGA+GGG 0.646357 4:+72314556 None:intergenic
AATTTAGCCCAAAACACTGA+AGG 0.648878 4:-72315658 MsG0480022420.01.T01:CDS
ATAAGAAGTAAGAATCACAA+TGG 0.657150 4:-72314267 MsG0480022420.01.T01:three_prime_UTR
TAAAGAGGGACCCAACACCT+AGG 0.661021 4:+72315596 None:intergenic
GCCCATGATCTGGATCCACT+AGG 0.663327 4:+72315505 None:intergenic
TGATCACTTGACTTGCAACA+AGG 0.664373 4:+72315572 None:intergenic
GAGGTGGTGGCCGAAATCTG+AGG 0.667765 4:-72319639 MsG0480022420.01.T01:CDS
CCTGTGTCTCTAGCATAGGG+AGG 0.667869 4:+72314555 None:intergenic
GTGGTGGCCGAAATCTGAGG+AGG 0.679030 4:-72319636 MsG0480022420.01.T01:CDS
GGCCACCACCTCCATCAACG+GGG 0.734842 4:+72319650 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAACATAAAATTTCT+AGG - Chr4:72317452-72317471 MsG0480022420.01.T01:intron 10.0%
!! TAAAAAAAAAACATAATTAC+GGG + Chr4:72318822-72318841 None:intergenic 10.0%
!!! AACTTTAAATAGATTTTTAA+CGG + Chr4:72315484-72315503 None:intergenic 10.0%
!!! AATACAATATTTTATACTAT+TGG + Chr4:72317494-72317513 None:intergenic 10.0%
!!! ACATTTGATTTTAAATATAA+GGG + Chr4:72317007-72317026 None:intergenic 10.0%
!!! ATATTACTAATAATTTTCAA+AGG - Chr4:72314595-72314614 MsG0480022420.01.T01:CDS 10.0%
!!! TTTGATTTAATTTAATTTTG+TGG - Chr4:72315311-72315330 MsG0480022420.01.T01:intron 10.0%
!! AAAAGATATAACATAATTAC+GGG + Chr4:72318856-72318875 None:intergenic 15.0%
!! AATTAAAACACTAAAAAACT+TGG - Chr4:72315093-72315112 MsG0480022420.01.T01:intron 15.0%
!! AATTAAAATTAAAATGCGTA+GGG - Chr4:72315055-72315074 MsG0480022420.01.T01:intron 15.0%
!! GAAAAGATATAACATAATTA+CGG + Chr4:72318857-72318876 None:intergenic 15.0%
!! TAATTAAAATTAAAATGCGT+AGG - Chr4:72315054-72315073 MsG0480022420.01.T01:intron 15.0%
!! TTAAATTTACAAATTACTCA+TGG + Chr4:72319381-72319400 None:intergenic 15.0%
!!! AATGTTTCTAATGTTAAAAT+TGG - Chr4:72318176-72318195 MsG0480022420.01.T01:intron 15.0%
!!! CTAGAAATTAAAATTGATTT+TGG + Chr4:72316035-72316054 None:intergenic 15.0%
!!! GACATTTGATTTTAAATATA+AGG + Chr4:72317008-72317027 None:intergenic 15.0%
!!! TTATTTGTTTTTCTAATAAC+AGG - Chr4:72318222-72318241 MsG0480022420.01.T01:intron 15.0%
!!! TTTTTGTTTAGTAGTATAAA+AGG - Chr4:72315527-72315546 MsG0480022420.01.T01:CDS 15.0%
!! AAATAATAGTGTATATCATG+AGG - Chr4:72314707-72314726 MsG0480022420.01.T01:CDS 20.0%
!! ACAAAGTATAGAGATTTATT+GGG - Chr4:72319197-72319216 MsG0480022420.01.T01:intron 20.0%
!! ACTAAATAAAGTAAGTAAAC+TGG + Chr4:72315133-72315152 None:intergenic 20.0%
!! ATAAGAGAAAACATCAAATT+TGG + Chr4:72319070-72319089 None:intergenic 20.0%
!! ATTAAAATTAAAATGCGTAG+GGG - Chr4:72315056-72315075 MsG0480022420.01.T01:intron 20.0%
!! ATTACACAAACAAATAAAAG+TGG + Chr4:72314901-72314920 None:intergenic 20.0%
!! ATTTAAAAAATTGAAAGCAG+AGG - Chr4:72317869-72317888 MsG0480022420.01.T01:intron 20.0%
!! CAAGTTAGAATTAATAATAG+AGG - Chr4:72315975-72315994 MsG0480022420.01.T01:intron 20.0%
!! CTATGGTCTTTAATTAAATT+TGG - Chr4:72319535-72319554 MsG0480022420.01.T01:intron 20.0%
!! GAAAGAAGTCATATAAAAAA+GGG + Chr4:72318761-72318780 None:intergenic 20.0%
!! TCATATTTAAGGACAAATAT+TGG - Chr4:72318662-72318681 MsG0480022420.01.T01:intron 20.0%
!! TGAAAGAAGTCATATAAAAA+AGG + Chr4:72318762-72318781 None:intergenic 20.0%
!! TTCAAAAAAAATCTCTTTAG+AGG + Chr4:72316797-72316816 None:intergenic 20.0%
!!! AATCAAATATCTCATTTTCT+CGG + Chr4:72316471-72316490 None:intergenic 20.0%
!!! AGTGACAATAAAATATTTTG+AGG - Chr4:72319017-72319036 MsG0480022420.01.T01:intron 20.0%
!!! AGTTTTTCAAAAGCTAATAA+TGG - Chr4:72319320-72319339 MsG0480022420.01.T01:intron 20.0%
!!! ATTGATTTCATAAGCTATTA+TGG - Chr4:72317791-72317810 MsG0480022420.01.T01:intron 20.0%
!!! ATTTTTAGCAGTAATTAGTT+TGG - Chr4:72318470-72318489 MsG0480022420.01.T01:intron 20.0%
!!! CAATACTTTTCCTTTATTAT+TGG - Chr4:72314939-72314958 MsG0480022420.01.T01:intron 20.0%
!!! CTATTATTTATGTTTTCTGA+CGG + Chr4:72314696-72314715 None:intergenic 20.0%
!!! TCTAAAGAGATTTTTTTTGA+AGG - Chr4:72316796-72316815 MsG0480022420.01.T01:intron 20.0%
!!! TGTCTGTTTTTTGTTTTATT+TGG - Chr4:72315197-72315216 MsG0480022420.01.T01:intron 20.0%
!!! TGTTTCCATTTATTTTATTG+AGG + Chr4:72316877-72316896 None:intergenic 20.0%
!!! TTATTTTCTTCTCAAAAACT+CGG + Chr4:72317437-72317456 None:intergenic 20.0%
! AAACAAATAAAAGTGGAGTT+TGG + Chr4:72314894-72314913 None:intergenic 25.0%
! AAACATAATTACGGGTATAT+TGG + Chr4:72318814-72318833 None:intergenic 25.0%
! AAATAAATGGAAACAGCTTA+TGG - Chr4:72316882-72316901 MsG0480022420.01.T01:intron 25.0%
! AACAGAATCTATTCTCATAT+TGG + Chr4:72316537-72316556 None:intergenic 25.0%
! AATCCGAACATTCATATTTA+AGG - Chr4:72318651-72318670 MsG0480022420.01.T01:intron 25.0%
! AGGCAAAGTAATAATTATTG+TGG + Chr4:72318035-72318054 None:intergenic 25.0%
! ATAAATCTCTATACTTTGTG+TGG + Chr4:72319196-72319215 None:intergenic 25.0%
! ATAAGAAGTAAGAATCACAA+TGG - Chr4:72319638-72319657 MsG0480022420.01.T01:CDS 25.0%
! ATATAAGGGTGAAAAAATGT+AGG + Chr4:72316993-72317012 None:intergenic 25.0%
! ATTATTACTTTGCCTATAGT+TGG - Chr4:72318040-72318059 MsG0480022420.01.T01:intron 25.0%
! CAACTTTCTTAACCAAATAA+AGG + Chr4:72315588-72315607 None:intergenic 25.0%
! CACAAAGTATAGAGATTTAT+TGG - Chr4:72319196-72319215 MsG0480022420.01.T01:intron 25.0%
! CATACACACTTATCATAAAA+GGG - Chr4:72317723-72317742 MsG0480022420.01.T01:intron 25.0%
! CATCAAAAACTTAGTCATAA+AGG - Chr4:72317033-72317052 MsG0480022420.01.T01:intron 25.0%
! GACACAATAATGACATAATA+CGG - Chr4:72316588-72316607 MsG0480022420.01.T01:intron 25.0%
! GAGTTTGTAAATTCAATAAC+AGG + Chr4:72317066-72317085 None:intergenic 25.0%
! GGACAAGAAAAAATTTCAAA+AGG + Chr4:72318740-72318759 None:intergenic 25.0%
! GTAACATGTGATAAATTCTA+TGG - Chr4:72318879-72318898 MsG0480022420.01.T01:intron 25.0%
! GTGTTTGAATCATTTATACT+TGG + Chr4:72317287-72317306 None:intergenic 25.0%
! GTTGTAATTAACAAGCAAAT+AGG - Chr4:72316563-72316582 MsG0480022420.01.T01:intron 25.0%
! TAACTGATTGTAATTACAAG+TGG - Chr4:72315853-72315872 MsG0480022420.01.T01:intron 25.0%
! TAGCTCCTCAATAAAATAAA+TGG - Chr4:72316869-72316888 MsG0480022420.01.T01:intron 25.0%
! TATAAGGGTGAAAAAATGTA+GGG + Chr4:72316992-72317011 None:intergenic 25.0%
! TATTCCTGTAAAAACAATGA+AGG + Chr4:72319279-72319298 None:intergenic 25.0%
! TCTGAGTAGATTTAAAAAAC+AGG + Chr4:72316282-72316301 None:intergenic 25.0%
! TGTCCTTAAATATGAATGTT+CGG + Chr4:72318657-72318676 None:intergenic 25.0%
! TTACAAGTTCTTTCACAAAA+TGG + Chr4:72317129-72317148 None:intergenic 25.0%
! TTATTACTTTGCCTATAGTT+GGG - Chr4:72318041-72318060 MsG0480022420.01.T01:intron 25.0%
! TTATTCAATGAGCTTATCAT+AGG + Chr4:72316917-72316936 None:intergenic 25.0%
! TTGTGATTCTTACTTCTTAT+AGG + Chr4:72319638-72319657 None:intergenic 25.0%
! TTTATTAGAATAGAACAACC+TGG + Chr4:72315249-72315268 None:intergenic 25.0%
!! AAAATTTTGTAAGTGTGTGT+TGG - Chr4:72315803-72315822 MsG0480022420.01.T01:intron 25.0%
!! AAACATAAAATTTCTAGGTG+AGG - Chr4:72317457-72317476 MsG0480022420.01.T01:intron 25.0%
!! AAATCCTCTAAAGAGATATT+TGG - Chr4:72316820-72316839 MsG0480022420.01.T01:intron 25.0%
!! AACAACTCTTTTCAATTAAG+TGG + Chr4:72316086-72316105 None:intergenic 25.0%
!! ACACTTACAAAATTTTCGAT+TGG + Chr4:72315799-72315818 None:intergenic 25.0%
!! ACTTACAAAATTTTCGATTG+GGG + Chr4:72315797-72315816 None:intergenic 25.0%
!! ATTTTGTGAAAGAACTTGTA+AGG - Chr4:72317128-72317147 MsG0480022420.01.T01:intron 25.0%
!! CACTTACAAAATTTTCGATT+GGG + Chr4:72315798-72315817 None:intergenic 25.0%
!! GATAAACACCATCTAAAATT+AGG + Chr4:72314666-72314685 None:intergenic 25.0%
!! GTTTAGTTCAATGAGTTTAA+TGG + Chr4:72317234-72317253 None:intergenic 25.0%
!! TATTAACTTGGCTTATTACA+TGG - Chr4:72319444-72319463 MsG0480022420.01.T01:intron 25.0%
!! TGTAAAAATCACACGTTTTA+GGG - Chr4:72315929-72315948 MsG0480022420.01.T01:intron 25.0%
!! TTTGTTTAGAGTTTAGACTA+TGG - Chr4:72319518-72319537 MsG0480022420.01.T01:intron 25.0%
!! TTTTATTGAGGAGCTAATTA+TGG + Chr4:72316865-72316884 None:intergenic 25.0%
!! TTTTCAAAAGCTAATAATGG+TGG - Chr4:72319323-72319342 MsG0480022420.01.T01:intron 25.0%
!!! AAAATTGATTTTGGCATGTT+TGG + Chr4:72316026-72316045 None:intergenic 25.0%
!!! ATAAAGGAAAAGTATTGAAG+TGG + Chr4:72314936-72314955 None:intergenic 25.0%
!!! CTTGTTGTATTTCTGAAATT+AGG - Chr4:72315616-72315635 MsG0480022420.01.T01:CDS 25.0%
!!! CTTTCTAGTTTTCCTTTATT+TGG - Chr4:72315573-72315592 MsG0480022420.01.T01:CDS 25.0%
!!! TTGAGGCGATTTTTAAAATA+AGG + Chr4:72314621-72314640 None:intergenic 25.0%
AAACACAACTTTATATCTCC+CGG - Chr4:72317301-72317320 MsG0480022420.01.T01:intron 30.0%
AAATGAAGAGACTGAGTTAT+AGG + Chr4:72318077-72318096 None:intergenic 30.0%
AATATGAATGTTCGGATTGT+CGG + Chr4:72318649-72318668 None:intergenic 30.0%
AATGAAGAGACTGAGTTATA+GGG + Chr4:72318076-72318095 None:intergenic 30.0%
ACATTAATAGCACTAGATGT+TGG + Chr4:72317168-72317187 None:intergenic 30.0%
AGTCACTTGAACGATAAATT+AGG - Chr4:72315905-72315924 MsG0480022420.01.T01:intron 30.0%
ATAAGGGTGAAAAAATGTAG+GGG + Chr4:72316991-72317010 None:intergenic 30.0%
ATAAGTGTGTATGCTATAAG+CGG + Chr4:72317716-72317735 None:intergenic 30.0%
ATCACCAAAACTTATAGACT+GGG - Chr4:72316141-72316160 MsG0480022420.01.T01:intron 30.0%
ATCTACTCAGACATCATAAT+AGG - Chr4:72316291-72316310 MsG0480022420.01.T01:intron 30.0%
ATTAAGCTGCTTATCGAAAT+AGG + Chr4:72317690-72317709 None:intergenic 30.0%
ATTACATGGATGTGAATTGT+GGG - Chr4:72319458-72319477 MsG0480022420.01.T01:intron 30.0%
ATTCATAACTTGAGAGATGT+CGG - Chr4:72314377-72314396 MsG0480022420.01.T01:three_prime_UTR 30.0%
ATTCTTACTTCTTATAGGTG+GGG + Chr4:72319633-72319652 None:intergenic 30.0%
CAATATCAGATTTAGTCATC+AGG - Chr4:72318951-72318970 MsG0480022420.01.T01:intron 30.0%
CAATCATTCCAAAGCATAAA+AGG + Chr4:72316172-72316191 None:intergenic 30.0%
CAGAAAGAAGATTCGTTAAT+GGG + Chr4:72316118-72316137 None:intergenic 30.0%
CATAATCTCAATCCTAAGTT+CGG + Chr4:72317256-72317275 None:intergenic 30.0%
CTACTTGTAATTATGAAGCT+AGG - Chr4:72319484-72319503 MsG0480022420.01.T01:intron 30.0%
GATTCTTACTTCTTATAGGT+GGG + Chr4:72319634-72319653 None:intergenic 30.0%
GCATACACACTTATCATAAA+AGG - Chr4:72317722-72317741 MsG0480022420.01.T01:intron 30.0%
GTAATTAACAAGCAAATAGG+TGG - Chr4:72316566-72316585 MsG0480022420.01.T01:intron 30.0%
GTCACTTGAACGATAAATTA+GGG - Chr4:72315906-72315925 MsG0480022420.01.T01:intron 30.0%
GTGAATCGATCCAATAATAA+AGG + Chr4:72314952-72314971 None:intergenic 30.0%
TATCACCAAAACTTATAGAC+TGG - Chr4:72316140-72316159 MsG0480022420.01.T01:intron 30.0%
TATTACATGGATGTGAATTG+TGG - Chr4:72319457-72319476 MsG0480022420.01.T01:intron 30.0%
TGATTCTTACTTCTTATAGG+TGG + Chr4:72319635-72319654 None:intergenic 30.0%
TGTGTACACAAGTCAATATT+AGG + Chr4:72318010-72318029 None:intergenic 30.0%
TTAAGCTGCTTATCGAAATA+GGG + Chr4:72317689-72317708 None:intergenic 30.0%
TTAATGCTGTAAACTGAATC+TGG - Chr4:72316239-72316258 MsG0480022420.01.T01:intron 30.0%
! AAGTACAAAATTTTGTCGTG+TGG - Chr4:72316501-72316520 MsG0480022420.01.T01:intron 30.0%
! AGATAGATGGTTGATATTCA+TGG - Chr4:72316620-72316639 MsG0480022420.01.T01:intron 30.0%
! ATATTTGGAAGGGTTTGTTT+AGG - Chr4:72316835-72316854 MsG0480022420.01.T01:intron 30.0%
! ATGTTTGTTGACAATGAGTT+TGG - Chr4:72318530-72318549 MsG0480022420.01.T01:CDS 30.0%
! CTCTAAAGAGATATTTGGAA+GGG - Chr4:72316825-72316844 MsG0480022420.01.T01:intron 30.0%
! GAAGTGTGTTACTATTAACT+TGG - Chr4:72319432-72319451 MsG0480022420.01.T01:intron 30.0%
! GTACTTGCTTGAAATTTGTT+TGG - Chr4:72315222-72315241 MsG0480022420.01.T01:intron 30.0%
! GTGTAAAAATCACACGTTTT+AGG - Chr4:72315928-72315947 MsG0480022420.01.T01:intron 30.0%
! TCAATTAAGTGGTTCACTTT+TGG + Chr4:72316075-72316094 None:intergenic 30.0%
! TGGATCAACCTAATTTTAGA+TGG - Chr4:72314655-72314674 MsG0480022420.01.T01:CDS 30.0%
! TTATCCTCATGAGAGAATTT+TGG + Chr4:72318921-72318940 None:intergenic 30.0%
! TTTAGAGCTTCATAGAATCA+CGG + Chr4:72318572-72318591 None:intergenic 30.0%
!! TGGTTAAGAAAGTTGATGAA+GGG - Chr4:72315593-72315612 MsG0480022420.01.T01:CDS 30.0%
!! TGTATTTCTGAAATTAGGAG+AGG - Chr4:72315621-72315640 MsG0480022420.01.T01:CDS 30.0%
!! TTGGTTAAGAAAGTTGATGA+AGG - Chr4:72315592-72315611 MsG0480022420.01.T01:CDS 30.0%
!!! CTTTTATGCTTTGGAATGAT+TGG - Chr4:72316170-72316189 MsG0480022420.01.T01:intron 30.0%
!!! TGGTTTTGTAAGAGATTAAG+AGG - Chr4:72317098-72317117 MsG0480022420.01.T01:intron 30.0%
AAAGTTGTGCAATACATACC+AGG + Chr4:72318446-72318465 None:intergenic 35.0%
AAATAGGGACTTAATCAGGA+GGG + Chr4:72317674-72317693 None:intergenic 35.0%
AAGGACATTACCATCATATG+AGG - Chr4:72317911-72317930 MsG0480022420.01.T01:intron 35.0%
AATTTAGCCCAAAACACTGA+AGG - Chr4:72318247-72318266 MsG0480022420.01.T01:intron 35.0%
ACAAACTCTTACAGCTTAAG+TGG - Chr4:72317078-72317097 MsG0480022420.01.T01:intron 35.0%
ACACTAATTACTACTCTCCA+TGG + Chr4:72316730-72316749 None:intergenic 35.0%
ACTCAGACATCATAATAGGT+GGG - Chr4:72316295-72316314 MsG0480022420.01.T01:intron 35.0%
ACTTGCAACAAGGATAAAGA+GGG + Chr4:72318326-72318345 None:intergenic 35.0%
AGAAGTAAGAATCACAATGG+AGG - Chr4:72319641-72319660 MsG0480022420.01.T01:CDS 35.0%
AGAGGCAACATGAATTCTAA+TGG - Chr4:72315993-72316012 MsG0480022420.01.T01:intron 35.0%
AGGACATTACCATCATATGA+GGG - Chr4:72317912-72317931 MsG0480022420.01.T01:intron 35.0%
AGGTAAAAAACACATTTCGG+CGG + Chr4:72316968-72316987 None:intergenic 35.0%
AGGTGGGTCATACATATATA+TGG - Chr4:72318971-72318990 MsG0480022420.01.T01:intron 35.0%
AGTCAACATATGACAAGAAG+AGG - Chr4:72314339-72314358 MsG0480022420.01.T01:three_prime_UTR 35.0%
ATAATAGGTGGGGTAATTGT+AGG - Chr4:72316306-72316325 MsG0480022420.01.T01:intron 35.0%
ATATGACAAGAAGAGGGTTA+AGG - Chr4:72314346-72314365 MsG0480022420.01.T01:three_prime_UTR 35.0%
ATCAGATTTAGTCATCAGGT+GGG - Chr4:72318955-72318974 MsG0480022420.01.T01:intron 35.0%
ATCCAAAACCGATTAATCTG+GGG + Chr4:72317408-72317427 None:intergenic 35.0%
ATCGAAATAGGGACTTAATC+AGG + Chr4:72317678-72317697 None:intergenic 35.0%
CATATGAGGGAATAGCTAAT+TGG - Chr4:72317925-72317944 MsG0480022420.01.T01:intron 35.0%
CATTGAACTAAACCGAACTT+AGG - Chr4:72317241-72317260 MsG0480022420.01.T01:intron 35.0%
CCAGAAAGAAGATTCGTTAA+TGG + Chr4:72316119-72316138 None:intergenic 35.0%
CCATTAACGAATCTTCTTTC+TGG - Chr4:72316116-72316135 MsG0480022420.01.T01:intron 35.0%
CCTTCCAAATATCTCTTTAG+AGG + Chr4:72316827-72316846 None:intergenic 35.0%
GAAATGTGAGAATCAAAAGC+TGG - Chr4:72316383-72316402 MsG0480022420.01.T01:intron 35.0%
GAAGTAAGAATCACAATGGA+GGG - Chr4:72319642-72319661 MsG0480022420.01.T01:CDS 35.0%
GAGAATCAAAAGCTGGATAT+AGG - Chr4:72316390-72316409 MsG0480022420.01.T01:intron 35.0%
GATAAATACTCCTACTTGCT+TGG - Chr4:72316202-72316221 MsG0480022420.01.T01:intron 35.0%
GATCCAAAACCGATTAATCT+GGG + Chr4:72317409-72317428 None:intergenic 35.0%
GCAATGCATTCAGTAATTTC+AGG - Chr4:72317971-72317990 MsG0480022420.01.T01:intron 35.0%
GGGAGGTAAAAAACACATTT+CGG + Chr4:72316971-72316990 None:intergenic 35.0%
GTCAACATATGACAAGAAGA+GGG - Chr4:72314340-72314359 MsG0480022420.01.T01:three_prime_UTR 35.0%
TAAACAAATTGCCCATGATC+TGG + Chr4:72318413-72318432 None:intergenic 35.0%
TAACTAAGTGCAGATGTCAA+CGG - Chr4:72316666-72316685 MsG0480022420.01.T01:intron 35.0%
TAAGCCAAAATTCTCTCATG+AGG - Chr4:72318914-72318933 MsG0480022420.01.T01:intron 35.0%
TAATGGAGAGTCGTTACAAA+CGG - Chr4:72314440-72314459 MsG0480022420.01.T01:three_prime_UTR 35.0%
TACTCAGACATCATAATAGG+TGG - Chr4:72316294-72316313 MsG0480022420.01.T01:intron 35.0%
TATCAGATTTAGTCATCAGG+TGG - Chr4:72318954-72318973 MsG0480022420.01.T01:intron 35.0%
TGAAACGAAACAGAAACGTA+CGG + Chr4:72315176-72315195 None:intergenic 35.0%
TGAGTTTGGCAAAATCAAAG+TGG - Chr4:72318544-72318563 MsG0480022420.01.T01:CDS 35.0%
TGCAAGTCAAGTGATCATTA+TGG - Chr4:72318339-72318358 MsG0480022420.01.T01:intron 35.0%
TTAGCTATTCCCTCATATGA+TGG + Chr4:72317924-72317943 None:intergenic 35.0%
TTTGTTTATTCATCGCTACC+TGG - Chr4:72318425-72318444 MsG0480022420.01.T01:intron 35.0%
! ACCTTGCAAATCAAAGTGTT+TGG + Chr4:72317544-72317563 None:intergenic 35.0%
! ACTTTCTACCTTCAGTGTTT+TGG + Chr4:72318258-72318277 None:intergenic 35.0%
! CCTCTAAAGAGATATTTGGA+AGG - Chr4:72316824-72316843 MsG0480022420.01.T01:intron 35.0%
! CCTTGCAAATCAAAGTGTTT+GGG + Chr4:72317543-72317562 None:intergenic 35.0%
! CGATTCACGTACTTTAGAAA+TGG - Chr4:72314964-72314983 MsG0480022420.01.T01:intron 35.0%
! CTTGCAAATCAAAGTGTTTG+GGG + Chr4:72317542-72317561 None:intergenic 35.0%
! CTTTCTACCTTCAGTGTTTT+GGG + Chr4:72318257-72318276 None:intergenic 35.0%
! GCAGTTGAAGGAGAAATTTT+TGG - Chr4:72316412-72316431 MsG0480022420.01.T01:intron 35.0%
!! AACTTGCTATCGAAAAGTTG+AGG + Chr4:72315758-72315777 None:intergenic 35.0%
!! AACTTTGCCATGGCTTTAAT+TGG - Chr4:72317353-72317372 MsG0480022420.01.T01:intron 35.0%
!! ACTTTGCCATGGCTTTAATT+GGG - Chr4:72317354-72317373 MsG0480022420.01.T01:intron 35.0%
!! ATGGACTAGCCAACAAAAAT+TGG + Chr4:72317329-72317348 None:intergenic 35.0%
!! ATTGATTTTGGCATGTTTGG+AGG + Chr4:72316023-72316042 None:intergenic 35.0%
!! TAACACAAAAGCACCATGTT+TGG - Chr4:72314785-72314804 MsG0480022420.01.T01:intron 35.0%
!!! AGATTAATCGGTTTTGGATC+GGG - Chr4:72317409-72317428 MsG0480022420.01.T01:intron 35.0%
!!! CAGATTAATCGGTTTTGGAT+CGG - Chr4:72317408-72317427 MsG0480022420.01.T01:intron 35.0%
!!! GAAATTTTTGGCTTTACCAC+TGG - Chr4:72316424-72316443 MsG0480022420.01.T01:intron 35.0%
AAACGAAACAGAAACGTACG+GGG + Chr4:72315174-72315193 None:intergenic 40.0%
AATGCGCAATGTATCCAACT+TGG - Chr4:72319399-72319418 MsG0480022420.01.T01:intron 40.0%
AATGTATCCAACTTGGGACT+TGG - Chr4:72319406-72319425 MsG0480022420.01.T01:intron 40.0%
ACGATGAGTAGCTGTTATTC+TGG + Chr4:72318606-72318625 None:intergenic 40.0%
ACGGTTAAATCGCAGATAGA+TGG - Chr4:72316607-72316626 MsG0480022420.01.T01:intron 40.0%
AGAACACAAAGGTCTGTGAT+TGG - Chr4:72317829-72317848 MsG0480022420.01.T01:intron 40.0%
AGATCTTGAGCTGATAGCTA+TGG - Chr4:72315336-72315355 MsG0480022420.01.T01:intron 40.0%
ATGCGCAATGTATCCAACTT+GGG - Chr4:72319400-72319419 MsG0480022420.01.T01:intron 40.0%
ATGTATCCAACTTGGGACTT+GGG - Chr4:72319407-72319426 MsG0480022420.01.T01:intron 40.0%
CAACTGTCATTGATCAGGAA+GGG + Chr4:72317629-72317648 None:intergenic 40.0%
CAGTTCAACTGTCATTGATC+AGG + Chr4:72317634-72317653 None:intergenic 40.0%
CATACTCATGTTTCTTGAGC+AGG + Chr4:72317579-72317598 None:intergenic 40.0%
CCAAAAAACAGAAACTGGTC+TGG - Chr4:72316753-72316772 MsG0480022420.01.T01:intron 40.0%
CGATCCAAAACCGATTAATC+TGG + Chr4:72317410-72317429 None:intergenic 40.0%
CTCAGACATCATAATAGGTG+GGG - Chr4:72316296-72316315 MsG0480022420.01.T01:intron 40.0%
CTGATCAATGACAGTTGAAC+TGG - Chr4:72317632-72317651 MsG0480022420.01.T01:intron 40.0%
CTGCTCAAGAAACATGAGTA+TGG - Chr4:72317577-72317596 MsG0480022420.01.T01:intron 40.0%
GAAACGAAACAGAAACGTAC+GGG + Chr4:72315175-72315194 None:intergenic 40.0%
GAAATAGGGACTTAATCAGG+AGG + Chr4:72317675-72317694 None:intergenic 40.0%
GAACACAAAGGTCTGTGATT+GGG - Chr4:72317830-72317849 MsG0480022420.01.T01:intron 40.0%
GAATCATCGTCATCCAAACA+TGG + Chr4:72314801-72314820 None:intergenic 40.0%
GACTCTCCATTATCACACAA+TGG + Chr4:72314432-72314451 None:intergenic 40.0%
GACTTGCAACAAGGATAAAG+AGG + Chr4:72318327-72318346 None:intergenic 40.0%
GAGGAACAAAACAAGCAGAA+AGG - Chr4:72319036-72319055 MsG0480022420.01.T01:intron 40.0%
GAGGACTTGAAGCAACAATA+AGG + Chr4:72315739-72315758 None:intergenic 40.0%
GCATGTTTATATTGGCGTCA+AGG - Chr4:72314402-72314421 MsG0480022420.01.T01:three_prime_UTR 40.0%
GGTAAAAAACACATTTCGGC+GGG + Chr4:72316967-72316986 None:intergenic 40.0%
GTAAAAAACACATTTCGGCG+GGG + Chr4:72316966-72316985 None:intergenic 40.0%
GTATTTGCTTGCATTGCATG+TGG + Chr4:72314756-72314775 None:intergenic 40.0%
GTGTGCCAAAAAACAGAAAC+TGG - Chr4:72316748-72316767 MsG0480022420.01.T01:intron 40.0%
TAACTAGATGCTTGTGCTGT+GGG - Chr4:72318365-72318384 MsG0480022420.01.T01:intron 40.0%
TAAGAATCACAATGGAGGGT+AGG - Chr4:72319646-72319665 MsG0480022420.01.T01:CDS 40.0%
TAGCCAACAAAAATTGGCAC+CGG + Chr4:72317323-72317342 None:intergenic 40.0%
TATGATTCTGACATTGCCAC+CGG - Chr4:72318286-72318305 MsG0480022420.01.T01:intron 40.0%
TATGGCTTCTTCTCTGTTAC+TGG - Chr4:72315354-72315373 MsG0480022420.01.T01:intron 40.0%
TCAACTGTCATTGATCAGGA+AGG + Chr4:72317630-72317649 None:intergenic 40.0%
TCATGTCAAACCTTGAGGAA+AGG - Chr4:72319233-72319252 MsG0480022420.01.T01:intron 40.0%
TCCAAAACCGATTAATCTGG+GGG + Chr4:72317407-72317426 None:intergenic 40.0%
TCCAAATACTCCTTTCCTCA+AGG + Chr4:72319246-72319265 None:intergenic 40.0%
TCTGTGATTGTTGTCTGACA+AGG - Chr4:72317892-72317911 MsG0480022420.01.T01:intron 40.0%
TGTTTGTGATGTTGATGCTC+AGG - Chr4:72319114-72319133 MsG0480022420.01.T01:intron 40.0%
TTACTTTGCCTATAGTTGGG+TGG - Chr4:72318044-72318063 MsG0480022420.01.T01:intron 40.0%
TTCCTCAAGGTTTGACATGA+AGG + Chr4:72319233-72319252 None:intergenic 40.0%
TTGATCAGGAAGGGAGTTTA+CGG + Chr4:72317620-72317639 None:intergenic 40.0%
! CAATACAGCATTTTCCTGCA+TGG - Chr4:72318122-72318141 MsG0480022420.01.T01:intron 40.0%
! GAAAGAACTTGTAAGGCACT+AGG - Chr4:72317135-72317154 MsG0480022420.01.T01:intron 40.0%
! GCATCCCAGTCTATAAGTTT+TGG + Chr4:72316148-72316167 None:intergenic 40.0%
! GCTTGAAATTTGTTTGGACC+AGG - Chr4:72315228-72315247 MsG0480022420.01.T01:intron 40.0%
! TGTCGGAGGCATGTTTATAT+TGG - Chr4:72314394-72314413 MsG0480022420.01.T01:three_prime_UTR 40.0%
! TGTTCTGGTCTAGAACACAA+AGG - Chr4:72317818-72317837 MsG0480022420.01.T01:intron 40.0%
! TTCTTCTCTGTTACTGGTTG+TGG - Chr4:72315360-72315379 MsG0480022420.01.T01:intron 40.0%
!! ACCTTGAGGAAAGGAGTATT+TGG - Chr4:72319242-72319261 MsG0480022420.01.T01:intron 40.0%
!! AGCTATTATGGAGAGTGTTC+TGG - Chr4:72317803-72317822 MsG0480022420.01.T01:intron 40.0%
!! CCCAAACACTTTGATTTGCA+AGG - Chr4:72317540-72317559 MsG0480022420.01.T01:intron 40.0%
!! GTAAGTGTGTGTTGGTTCTA+AGG - Chr4:72315811-72315830 MsG0480022420.01.T01:intron 40.0%
!! TGATCACTTGACTTGCAACA+AGG + Chr4:72318336-72318355 None:intergenic 40.0%
!! TGGTTCACTTTTGGAAGAGT+CGG + Chr4:72316066-72316085 None:intergenic 40.0%
!!! ATCACACGTTTTAGGGCAAA+AGG - Chr4:72315936-72315955 MsG0480022420.01.T01:intron 40.0%
!!! CCAGACCAGTTTCTGTTTTT+TGG + Chr4:72316756-72316775 None:intergenic 40.0%
!!! GCTGCCTTCATTGTTTTTAC+AGG - Chr4:72319272-72319291 MsG0480022420.01.T01:intron 40.0%
AATCACAATGGAGGGTAGGA+TGG - Chr4:72319650-72319669 MsG0480022420.01.T01:CDS 45.0%
ACACCTGTGTCTCTAGCATA+GGG + Chr4:72319356-72319375 None:intergenic 45.0%
AGCCAACAAAAATTGGCACC+GGG + Chr4:72317322-72317341 None:intergenic 45.0%
AGCTGGATATAGGCAGTTGA+AGG - Chr4:72316400-72316419 MsG0480022420.01.T01:intron 45.0%
AGGAGACGACAACGAAGTAA+GGG - Chr4:72314289-72314308 MsG0480022420.01.T01:three_prime_UTR 45.0%
AGGAGGGACGTTGTAGATAT+AGG + Chr4:72317658-72317677 None:intergenic 45.0%
AGGGTGAAAAAATGTAGGGG+AGG + Chr4:72316988-72317007 None:intergenic 45.0%
CACCTTCATGTCAAACCTTG+AGG - Chr4:72319228-72319247 MsG0480022420.01.T01:intron 45.0%
CATAACTTGAGAGATGTCGG+AGG - Chr4:72314380-72314399 MsG0480022420.01.T01:three_prime_UTR 45.0%
CCAACACAAAGTGAGGTTTG+AGG + Chr4:72314638-72314657 None:intergenic 45.0%
CCTCAAACCTCACTTTGTGT+TGG - Chr4:72314635-72314654 MsG0480022420.01.T01:CDS 45.0%
GATCCTATATCAAAGCGCAG+AGG + Chr4:72318718-72318737 None:intergenic 45.0%
GGAGAGCCATTGTGTGATAA+TGG - Chr4:72314423-72314442 MsG0480022420.01.T01:three_prime_UTR 45.0%
GGTTGATCCAACACAAAGTG+AGG + Chr4:72314645-72314664 None:intergenic 45.0%
GTAACTAGATGCTTGTGCTG+TGG - Chr4:72318364-72318383 MsG0480022420.01.T01:intron 45.0%
TAAGCACACACCAAGCAAGT+AGG + Chr4:72316215-72316234 None:intergenic 45.0%
TGCTCTTGTACATGTAGCCA+TGG - Chr4:72316710-72316729 MsG0480022420.01.T01:intron 45.0%
TTGCCTATAGTTGGGTGGAT+GGG - Chr4:72318049-72318068 MsG0480022420.01.T01:intron 45.0%
TTTGCCTATAGTTGGGTGGA+TGG - Chr4:72318048-72318067 MsG0480022420.01.T01:intron 45.0%
TTTGCTTGCATTGCATGTGG+AGG + Chr4:72314753-72314772 None:intergenic 45.0%
! ACACAACGTTTGAAGCTGTG+CGG + Chr4:72314859-72314878 None:intergenic 45.0%
! ACAGCATTTTCCTGCATGGT+AGG - Chr4:72318126-72318145 MsG0480022420.01.T01:intron 45.0%
! ACCTAGTGGATCCAGATCAT+GGG - Chr4:72318399-72318418 MsG0480022420.01.T01:intron 45.0%
! ATTTTCCTGCATGGTAGGCA+AGG - Chr4:72318131-72318150 MsG0480022420.01.T01:intron 45.0%
! GGGATGCACCTTTTATGCTT+TGG - Chr4:72316161-72316180 MsG0480022420.01.T01:intron 45.0%
!! AGGAAAGGAGTATTTGGAGC+TGG - Chr4:72319248-72319267 MsG0480022420.01.T01:intron 45.0%
!! AGTGTGTGTTGGTTCTAAGG+TGG - Chr4:72315814-72315833 MsG0480022420.01.T01:intron 45.0%
!! TTAAAAAAAAAACATAATTA+CGG + Chr4:72318823-72318842 None:intergenic 5.0%
AAAAACACATTTCGGCGGGG+TGG + Chr4:72316963-72316982 None:intergenic 50.0%
AAAACACATTTCGGCGGGGT+GGG + Chr4:72316962-72316981 None:intergenic 50.0%
AAGTGCAGATGTCAACGGCA+AGG - Chr4:72316671-72316690 MsG0480022420.01.T01:intron 50.0%
AGCCATGGCAAAGTTCTGCA+TGG + Chr4:72317348-72317367 None:intergenic 50.0%
CACACCTGTGTCTCTAGCAT+AGG + Chr4:72319357-72319376 None:intergenic 50.0%
CCACCTCTGCGCTTTGATAT+AGG - Chr4:72318712-72318731 MsG0480022420.01.T01:intron 50.0%
CCTATATCAAAGCGCAGAGG+TGG + Chr4:72318715-72318734 None:intergenic 50.0%
CTGTGTCTCTAGCATAGGGA+GGG + Chr4:72319352-72319371 None:intergenic 50.0%
GAGGAGACGACAACGAAGTA+AGG - Chr4:72314288-72314307 MsG0480022420.01.T01:three_prime_UTR 50.0%
GGAGACGACAACGAAGTAAG+GGG - Chr4:72314290-72314309 MsG0480022420.01.T01:three_prime_UTR 50.0%
GTCCATGCAGAACTTTGCCA+TGG - Chr4:72317343-72317362 MsG0480022420.01.T01:intron 50.0%
GTCGTCTCCTCCTCAGATTT+CGG + Chr4:72314279-72314298 None:intergenic 50.0%
TAAAGAGGGACCCAACACCT+AGG + Chr4:72318312-72318331 None:intergenic 50.0%
TATCAAAGCGCAGAGGTGGT+AGG + Chr4:72318711-72318730 None:intergenic 50.0%
TATCCAACTTGGGACTTGGG+AGG - Chr4:72319410-72319429 MsG0480022420.01.T01:intron 50.0%
TCTGGATCCACTAGGTCTCA+TGG + Chr4:72318395-72318414 None:intergenic 50.0%
TGAACAGCTGAGATCTCCAG+TGG + Chr4:72316443-72316462 None:intergenic 50.0%
TGCAACAACAAACGCTGACG+AGG + Chr4:72317517-72317536 None:intergenic 50.0%
TGCTGCGTCATGTCTTCTAG+CGG - Chr4:72319151-72319170 MsG0480022420.01.T01:intron 50.0%
! CACAACGTTTGAAGCTGTGC+GGG + Chr4:72314858-72314877 None:intergenic 50.0%
! GACCTAGTGGATCCAGATCA+TGG - Chr4:72318398-72318417 MsG0480022420.01.T01:intron 50.0%
!! CTCCCGGTGCCAATTTTTGT+TGG - Chr4:72317317-72317336 MsG0480022420.01.T01:intron 50.0%
!! GCCCCCAGATTAATCGGTTT+TGG - Chr4:72317403-72317422 MsG0480022420.01.T01:intron 50.0%
!! GGGTTAGCCCCCAGATTAAT+CGG - Chr4:72317397-72317416 MsG0480022420.01.T01:intron 50.0%
AAACACATTTCGGCGGGGTG+GGG + Chr4:72316961-72316980 None:intergenic 55.0%
CAACTCCTTGCCTACCATGC+AGG + Chr4:72318139-72318158 None:intergenic 55.0%
CCTCCCTATGCTAGAGACAC+AGG - Chr4:72319350-72319369 MsG0480022420.01.T01:intron 55.0%
CCTGTGTCTCTAGCATAGGG+AGG + Chr4:72319353-72319372 None:intergenic 55.0%
CTGTTGCTGCTGAGCAGAGA+AGG - Chr4:72315416-72315435 MsG0480022420.01.T01:intron 55.0%
CTTCCTCCCAAGTCCCAAGT+TGG + Chr4:72319416-72319435 None:intergenic 55.0%
GCCCATGATCTGGATCCACT+AGG + Chr4:72318403-72318422 None:intergenic 55.0%
GCTGCGTCATGTCTTCTAGC+GGG - Chr4:72319152-72319171 MsG0480022420.01.T01:intron 55.0%
GGACCCATCCACCCAACTAT+AGG + Chr4:72318055-72318074 None:intergenic 55.0%
ATTGCCACCGGCCTAGGTGT+TGG - Chr4:72318298-72318317 MsG0480022420.01.T01:intron 60.0%
CGGGGGCCCAATTAAAGCCA+TGG + Chr4:72317363-72317382 None:intergenic 60.0%
GGGAGAGCCATGAGACCTAG+TGG - Chr4:72318385-72318404 MsG0480022420.01.T01:intron 60.0%
GTGGTGGCCGAAATCTGAGG+AGG - Chr4:72314269-72314288 MsG0480022420.01.T01:three_prime_UTR 60.0%
TCGGCCACCACCTCCATCAA+CGG + Chr4:72314260-72314279 None:intergenic 60.0%
TCTGACATTGCCACCGGCCT+AGG - Chr4:72318292-72318311 MsG0480022420.01.T01:intron 60.0%
TTGCCACCGGCCTAGGTGTT+GGG - Chr4:72318299-72318318 MsG0480022420.01.T01:intron 60.0%
TTTAATTGGGCCCCCGCTGG+TGG - Chr4:72317367-72317386 MsG0480022420.01.T01:intron 60.0%
! ATGAGGTGCCCCGTTGATGG+AGG - Chr4:72314247-72314266 MsG0480022420.01.T01:three_prime_UTR 60.0%
! CGTTTGAAGCTGTGCGGGTG+CGG + Chr4:72314853-72314872 None:intergenic 60.0%
! GAGGTGGTGGCCGAAATCTG+AGG - Chr4:72314266-72314285 MsG0480022420.01.T01:three_prime_UTR 60.0%
! GTTTGAAGCTGTGCGGGTGC+GGG + Chr4:72314852-72314871 None:intergenic 60.0%
! TTTGAAGCTGTGCGGGTGCG+GGG + Chr4:72314851-72314870 None:intergenic 60.0%
CGGCCACCACCTCCATCAAC+GGG + Chr4:72314259-72314278 None:intergenic 65.0%
GAGGGACCCAACACCTAGGC+CGG + Chr4:72318308-72318327 None:intergenic 65.0%
GGCCACCACCTCCATCAACG+GGG + Chr4:72314258-72314277 None:intergenic 65.0%
! AGGTGCCCCGTTGATGGAGG+TGG - Chr4:72314250-72314269 MsG0480022420.01.T01:three_prime_UTR 65.0%
! GGCTTTAATTGGGCCCCCGC+TGG - Chr4:72317364-72317383 MsG0480022420.01.T01:intron 65.0%
! TGCCCCGTTGATGGAGGTGG+TGG - Chr4:72314253-72314272 MsG0480022420.01.T01:three_prime_UTR 65.0%
ATTGGGCCCCCGCTGGTGGA+CGG - Chr4:72317371-72317390 MsG0480022420.01.T01:intron 70.0%
CACATTTCGGCGGGGTGGGG+AGG + Chr4:72316958-72316977 None:intergenic 70.0%
GCGGGGTGGGGAGGAGTCTT+TGG + Chr4:72316949-72316968 None:intergenic 70.0%
GGACCCAACACCTAGGCCGG+TGG + Chr4:72318305-72318324 None:intergenic 70.0%
TAACCCCCCCCGTCCACCAG+CGG + Chr4:72317383-72317402 None:intergenic 70.0%
AACCCCCCCCGTCCACCAGC+GGG + Chr4:72317382-72317401 None:intergenic 75.0%
! TTGGGCCCCCGCTGGTGGAC+GGG - Chr4:72317372-72317391 MsG0480022420.01.T01:intron 75.0%
! ACCCCCCCCGTCCACCAGCG+GGG + Chr4:72317381-72317400 None:intergenic 80.0%
!! TGGGCCCCCGCTGGTGGACG+GGG - Chr4:72317373-72317392 MsG0480022420.01.T01:intron 80.0%
! CCCCCCCCGTCCACCAGCGG+GGG + Chr4:72317380-72317399 None:intergenic 85.0%
!! CCCCCGCTGGTGGACGGGGG+GGG - Chr4:72317377-72317396 MsG0480022420.01.T01:intron 85.0%
!! GCCCCCGCTGGTGGACGGGG+GGG - Chr4:72317376-72317395 MsG0480022420.01.T01:intron 85.0%
!! GGCCCCCGCTGGTGGACGGG+GGG - Chr4:72317375-72317394 MsG0480022420.01.T01:intron 85.0%
!! GGGCCCCCGCTGGTGGACGG+GGG - Chr4:72317374-72317393 MsG0480022420.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr4 gene 72314247 72319680 72314247 ID=MsG0480022420.01;Name=MsG0480022420.01
Chr4 mRNA 72314247 72319680 72314247 ID=MsG0480022420.01.T01;Parent=MsG0480022420.01;Name=MsG0480022420.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0.66|0.75|1|1|1|4|286|208
Chr4 exon 72314247 72314791 72314247 ID=MsG0480022420.01.T01:exon:10162;Parent=MsG0480022420.01.T01
Chr4 exon 72315481 72315683 72315481 ID=MsG0480022420.01.T01:exon:10161;Parent=MsG0480022420.01.T01
Chr4 exon 72318483 72318589 72318483 ID=MsG0480022420.01.T01:exon:10160;Parent=MsG0480022420.01.T01
Chr4 exon 72319623 72319680 72319623 ID=MsG0480022420.01.T01:exon:10159;Parent=MsG0480022420.01.T01
Chr4 CDS 72319623 72319680 72319623 ID=MsG0480022420.01.T01:cds;Parent=MsG0480022420.01.T01
Chr4 CDS 72318483 72318589 72318483 ID=MsG0480022420.01.T01:cds;Parent=MsG0480022420.01.T01
Chr4 CDS 72315481 72315683 72315481 ID=MsG0480022420.01.T01:cds;Parent=MsG0480022420.01.T01
Chr4 CDS 72314533 72314791 72314533 ID=MsG0480022420.01.T01:cds;Parent=MsG0480022420.01.T01
Chr4 three_prime_UTR 72314247 72314532 72314247 ID=MsG0480022420.01.T01:three_prime_utr;Parent=MsG0480022420.01.T01
Gene Sequence

>MsG0480022420.01.T01

ATGAGGTGCCCCGTTGATGGAGGTGGTGGCCGAAATCTGAGGAGGAGACGACAACGAAATCTTGAGCTGATAGCTATGGCTTCTTCTCTGTTACTGGTTGTGGTGTTTGTGTTTGATCTTATTGCTTTTGCTCTTGCTGTTGCTGCTGAGCAGAGAAGGAGTTCTGCCAATTTAGCCCAAAACACTGAAGGTAGAAAGTATTGTCAATATGATTCTGACATTGCCACCGGCCTAGGTGTTGGGTCCCTCTTTATCCTTGTTGCAAGTCAAGTGATCATTATGGTTGTAACTAGATGCTTGTGCTGTGGGAGAGCCATGAGACCTAGTGGATCCAGATCATGGGCAATTTGTTTATTCATCGCTACCTGGTTGACATTTCTTATTGCTGCGTCATGTCTTCTAGCGGGTTCAGTGAAAAATGCTTACCACACAAAGTATAGAGATTTATTGGGAGATAGAGCACCTTCATGTCAAACCTTGAGGAAAGGAGTATTTGGAGCTGGAGCTGCCTTCATTGTTTTTACAGGAATAGTCTCTGAGCTTTACTATGTTAGTTTTTCAAAAGCTAATAATGGTGGAGTCCCTCCCTATGCTAGAGACACAGGTGTGACCATGAGTAATTTGTAA
Protein sequence

>MsG0480022420.01.T01

MRCPVDGGGGRNLRRRRQRNLELIAMASSLLLVVVFVFDLIAFALAVAAEQRRSSANLAQNTEGRKYCQYDSDIATGLGVGSLFILVASQVIIMVVTRCLCCGRAMRPSGSRSWAICLFIATWLTFLIAASCLLAGSVKNAYHTKYRDLLGDRAPSCQTLRKGVFGAGAAFIVFTGIVSELYYVSFSKANNGGVPPYARDTGVTMSNL*