Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022442.01.T01 | XP_003607178.1 | 97.222 | 252 | 7 | 0 | 1 | 252 | 78 | 329 | 1.24E-179 | 510 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022442.01.T01 | O22469 | 59.925 | 267 | 102 | 2 | 1 | 262 | 81 | 347 | 1.42E-118 | 349 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022442.01.T01 | G7JMD2 | 97.222 | 252 | 7 | 0 | 1 | 252 | 78 | 329 | 5.93e-180 | 510 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180002218.01 | MsG0480022442.01 | 0.805840 | 1.099105e-49 | 5.875408e-47 |
MsG0180004995.01 | MsG0480022442.01 | 0.803133 | 4.031594e-49 | 2.010089e-46 |
MsG0180005048.01 | MsG0480022442.01 | 0.840637 | 7.710796e-58 | 1.105152e-54 |
MsG0180006133.01 | MsG0480022442.01 | 0.810460 | 1.139860e-50 | 6.874780e-48 |
MsG0380014666.01 | MsG0480022442.01 | 0.805100 | 1.570987e-49 | 8.239527e-47 |
MsG0480021393.01 | MsG0480022442.01 | 0.863300 | 2.747273e-64 | 8.288901e-61 |
MsG0480021424.01 | MsG0480022442.01 | 0.814338 | 1.620731e-51 | 1.084578e-48 |
MsG0480022431.01 | MsG0480022442.01 | 0.897473 | 1.359570e-76 | 1.538379e-72 |
MsG0480022442.01 | MsG0480022982.01 | 0.804732 | 1.875727e-49 | 9.745741e-47 |
MsG0480022442.01 | MsG0480023158.01 | 0.822236 | 2.638263e-53 | 2.195557e-50 |
MsG0480022442.01 | MsG0580025177.01 | 0.812139 | 4.925829e-51 | 3.106869e-48 |
MsG0480022442.01 | MsG0680035776.01 | 0.818350 | 2.052168e-52 | 1.532512e-49 |
MsG0480022442.01 | MsG0780039189.01 | 0.816021 | 6.852983e-52 | 4.801029e-49 |
MsG0380017282.01 | MsG0480022442.01 | 0.811390 | 7.170488e-51 | 4.432931e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022442.01.T01 | MTR_4g073080 | 97.222 | 252 | 7 | 0 | 1 | 252 | 78 | 329 | 0.0 | 510 |
MsG0480022442.01.T01 | MTR_4g096880 | 55.128 | 234 | 97 | 2 | 27 | 252 | 115 | 348 | 2.07e-84 | 259 |
MsG0480022442.01.T01 | MTR_2g039250 | 28.947 | 266 | 157 | 5 | 26 | 259 | 147 | 412 | 1.35e-28 | 114 |
MsG0480022442.01.T01 | MTR_8g080700 | 29.707 | 239 | 147 | 6 | 32 | 252 | 157 | 392 | 2.90e-26 | 107 |
MsG0480022442.01.T01 | MTR_2g100090 | 27.341 | 267 | 151 | 6 | 26 | 250 | 106 | 371 | 3.00e-22 | 96.3 |
MsG0480022442.01.T01 | MTR_2g016160 | 26.957 | 230 | 159 | 3 | 22 | 251 | 47 | 267 | 2.02e-21 | 92.0 |
MsG0480022442.01.T01 | MTR_5g024090 | 27.984 | 243 | 147 | 9 | 32 | 252 | 151 | 387 | 4.69e-21 | 92.4 |
MsG0480022442.01.T01 | MTR_6g004040 | 32.022 | 178 | 106 | 7 | 76 | 251 | 50 | 214 | 2.87e-15 | 76.3 |
MsG0480022442.01.T01 | MTR_6g004040 | 25.126 | 199 | 139 | 5 | 81 | 279 | 97 | 285 | 2.56e-11 | 64.3 |
MsG0480022442.01.T01 | MTR_5g016350 | 27.064 | 218 | 112 | 7 | 81 | 255 | 331 | 544 | 8.14e-14 | 71.6 |
MsG0480022442.01.T01 | MTR_5g016350 | 27.064 | 218 | 112 | 7 | 81 | 255 | 267 | 480 | 1.11e-13 | 71.2 |
MsG0480022442.01.T01 | MTR_5g085250 | 26.540 | 211 | 140 | 6 | 48 | 254 | 383 | 582 | 4.34e-13 | 69.7 |
MsG0480022442.01.T01 | MTR_5g085250 | 26.540 | 211 | 140 | 6 | 48 | 254 | 279 | 478 | 4.96e-13 | 69.3 |
MsG0480022442.01.T01 | MTR_5g085250 | 26.540 | 211 | 140 | 6 | 48 | 254 | 246 | 445 | 5.34e-13 | 68.9 |
MsG0480022442.01.T01 | MTR_4g095058 | 26.606 | 218 | 113 | 7 | 81 | 255 | 326 | 539 | 8.60e-13 | 68.6 |
MsG0480022442.01.T01 | MTR_4g095058 | 26.606 | 218 | 113 | 7 | 81 | 255 | 324 | 537 | 9.60e-13 | 68.6 |
MsG0480022442.01.T01 | MTR_8g038550 | 30.625 | 160 | 102 | 4 | 101 | 260 | 282 | 432 | 3.21e-12 | 67.0 |
MsG0480022442.01.T01 | MTR_5g016370 | 24.771 | 218 | 117 | 7 | 81 | 255 | 343 | 556 | 3.68e-12 | 66.6 |
MsG0480022442.01.T01 | MTR_7g451830 | 26.923 | 182 | 126 | 5 | 81 | 259 | 245 | 422 | 1.80e-11 | 64.3 |
MsG0480022442.01.T01 | MTR_7g047640 | 26.923 | 182 | 126 | 5 | 81 | 259 | 245 | 422 | 1.80e-11 | 64.3 |
MsG0480022442.01.T01 | MTR_4g045577 | 27.119 | 177 | 114 | 5 | 84 | 250 | 121 | 292 | 2.34e-11 | 64.3 |
MsG0480022442.01.T01 | MTR_2g012630 | 31.788 | 151 | 93 | 6 | 101 | 251 | 73 | 213 | 2.97e-11 | 64.3 |
MsG0480022442.01.T01 | MTR_2g012630 | 31.788 | 151 | 93 | 6 | 101 | 251 | 73 | 213 | 3.01e-11 | 64.3 |
MsG0480022442.01.T01 | MTR_3g045130 | 32.000 | 150 | 93 | 4 | 100 | 249 | 370 | 510 | 3.16e-11 | 63.9 |
MsG0480022442.01.T01 | MTR_7g086360 | 25.909 | 220 | 146 | 8 | 34 | 251 | 49 | 253 | 3.90e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022442.01.T01 | AT4G35050 | 59.925 | 267 | 102 | 2 | 1 | 262 | 81 | 347 | 1.45e-119 | 349 |
MsG0480022442.01.T01 | AT2G16780 | 61.049 | 267 | 99 | 2 | 1 | 262 | 80 | 346 | 6.86e-117 | 342 |
MsG0480022442.01.T01 | AT5G58230 | 53.498 | 243 | 103 | 3 | 27 | 259 | 115 | 357 | 4.16e-87 | 266 |
MsG0480022442.01.T01 | AT2G19540 | 31.855 | 248 | 143 | 8 | 26 | 252 | 149 | 391 | 1.38e-29 | 116 |
MsG0480022442.01.T01 | AT2G19520 | 28.179 | 291 | 164 | 6 | 26 | 272 | 153 | 442 | 1.19e-27 | 111 |
MsG0480022442.01.T01 | AT4G29730 | 26.460 | 291 | 169 | 7 | 26 | 272 | 133 | 422 | 1.01e-23 | 100 |
MsG0480022442.01.T01 | AT4G29730 | 26.481 | 287 | 166 | 7 | 26 | 268 | 133 | 418 | 1.07e-23 | 100 |
MsG0480022442.01.T01 | AT4G29730 | 26.481 | 287 | 166 | 7 | 26 | 268 | 133 | 418 | 1.07e-23 | 100 |
MsG0480022442.01.T01 | AT1G29260 | 26.857 | 175 | 122 | 1 | 76 | 250 | 97 | 265 | 9.46e-18 | 82.0 |
MsG0480022442.01.T01 | AT5G08390 | 33.333 | 153 | 92 | 5 | 99 | 251 | 72 | 214 | 1.43e-15 | 77.0 |
MsG0480022442.01.T01 | AT5G08390 | 25.126 | 199 | 139 | 5 | 81 | 279 | 97 | 285 | 1.93e-11 | 64.7 |
MsG0480022442.01.T01 | AT5G08390 | 29.032 | 155 | 100 | 5 | 101 | 255 | 32 | 176 | 3.77e-11 | 63.9 |
MsG0480022442.01.T01 | AT5G23430 | 32.450 | 151 | 92 | 5 | 101 | 251 | 74 | 214 | 2.97e-14 | 73.2 |
MsG0480022442.01.T01 | AT5G23430 | 29.677 | 155 | 99 | 5 | 101 | 255 | 32 | 176 | 7.64e-11 | 62.8 |
MsG0480022442.01.T01 | AT5G23430 | 32.450 | 151 | 92 | 5 | 101 | 251 | 74 | 214 | 2.97e-14 | 73.2 |
MsG0480022442.01.T01 | AT5G23430 | 29.677 | 155 | 99 | 5 | 101 | 255 | 32 | 176 | 7.64e-11 | 62.8 |
MsG0480022442.01.T01 | AT5G23430 | 32.450 | 151 | 92 | 5 | 101 | 251 | 74 | 214 | 3.11e-14 | 73.2 |
MsG0480022442.01.T01 | AT5G23430 | 29.677 | 155 | 99 | 5 | 101 | 255 | 32 | 176 | 7.79e-11 | 62.8 |
MsG0480022442.01.T01 | AT2G32950 | 27.551 | 196 | 129 | 5 | 62 | 254 | 395 | 580 | 4.92e-14 | 72.4 |
MsG0480022442.01.T01 | AT2G32950 | 27.551 | 196 | 129 | 5 | 62 | 254 | 282 | 467 | 7.70e-14 | 71.6 |
MsG0480022442.01.T01 | AT5G13480 | 31.250 | 160 | 101 | 4 | 101 | 260 | 222 | 372 | 4.23e-13 | 69.7 |
MsG0480022442.01.T01 | AT5G13480 | 31.250 | 160 | 101 | 4 | 101 | 260 | 210 | 360 | 4.65e-13 | 69.3 |
MsG0480022442.01.T01 | AT5G13480 | 31.250 | 160 | 101 | 4 | 101 | 260 | 210 | 360 | 4.69e-13 | 69.3 |
MsG0480022442.01.T01 | AT5G13480 | 31.250 | 160 | 101 | 4 | 101 | 260 | 233 | 383 | 4.84e-13 | 69.3 |
MsG0480022442.01.T01 | AT3G63460 | 25.281 | 178 | 122 | 4 | 81 | 250 | 118 | 292 | 7.45e-13 | 68.9 |
MsG0480022442.01.T01 | AT3G63460 | 25.281 | 178 | 122 | 4 | 81 | 250 | 118 | 292 | 7.96e-13 | 68.9 |
MsG0480022442.01.T01 | AT3G63460 | 25.281 | 178 | 122 | 4 | 81 | 250 | 118 | 292 | 8.18e-13 | 68.9 |
MsG0480022442.01.T01 | AT4G11110 | 29.268 | 164 | 107 | 3 | 90 | 253 | 777 | 931 | 9.63e-13 | 68.6 |
MsG0480022442.01.T01 | AT1G61210 | 30.464 | 151 | 95 | 5 | 101 | 251 | 73 | 213 | 4.74e-12 | 66.6 |
MsG0480022442.01.T01 | AT1G61210 | 30.464 | 151 | 95 | 5 | 101 | 251 | 73 | 213 | 5.00e-12 | 66.6 |
MsG0480022442.01.T01 | AT1G61210 | 30.464 | 151 | 95 | 5 | 101 | 251 | 73 | 213 | 5.39e-12 | 66.6 |
MsG0480022442.01.T01 | AT1G11160 | 30.464 | 151 | 95 | 6 | 101 | 251 | 73 | 213 | 8.06e-12 | 65.9 |
MsG0480022442.01.T01 | AT1G11160 | 29.697 | 165 | 106 | 5 | 91 | 255 | 21 | 175 | 2.16e-11 | 64.7 |
MsG0480022442.01.T01 | AT1G11160 | 30.464 | 151 | 95 | 6 | 101 | 251 | 73 | 213 | 8.61e-12 | 65.9 |
MsG0480022442.01.T01 | AT1G11160 | 29.697 | 165 | 106 | 5 | 91 | 255 | 21 | 175 | 2.18e-11 | 64.7 |
MsG0480022442.01.T01 | AT1G11160 | 30.464 | 151 | 95 | 6 | 101 | 251 | 31 | 171 | 8.68e-12 | 65.9 |
MsG0480022442.01.T01 | AT1G11160 | 30.464 | 151 | 95 | 6 | 101 | 251 | 73 | 213 | 8.73e-12 | 65.9 |
MsG0480022442.01.T01 | AT1G11160 | 29.697 | 165 | 106 | 5 | 91 | 255 | 21 | 175 | 2.33e-11 | 64.7 |
MsG0480022442.01.T01 | AT5G67320 | 26.404 | 178 | 112 | 6 | 81 | 250 | 361 | 527 | 2.65e-11 | 64.3 |
MsG0480022442.01.T01 | AT1G18830 | 25.000 | 184 | 131 | 5 | 81 | 260 | 111 | 291 | 7.77e-11 | 62.8 |
MsG0480022442.01.T01 | AT1G18830 | 25.000 | 184 | 131 | 5 | 81 | 260 | 111 | 291 | 7.77e-11 | 62.8 |
MsG0480022442.01.T01 | AT1G18830 | 25.000 | 184 | 131 | 5 | 81 | 260 | 111 | 291 | 7.92e-11 | 62.8 |
Find 109 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGACTGCAAGTTGGTAATT+TGG | 0.200192 | 4:+72594240 | MsG0480022442.01.T01:CDS |
GAGGAGTTTGTGGAGGTTAA+AGG | 0.205640 | 4:-72593519 | None:intergenic |
GACGGGTTGAGATGGGTTTC+CGG | 0.242362 | 4:-72593603 | None:intergenic |
TTCAGCGAGCATGAGGTAAT+TGG | 0.242797 | 4:-72593570 | None:intergenic |
TTGCATAATGAGAATTTGTT+TGG | 0.282089 | 4:+72594206 | MsG0480022442.01.T01:CDS |
ACGGGTTGAGATGGGTTTCC+GGG | 0.287427 | 4:-72593602 | None:intergenic |
TGACTGCAAGTTGGTAATTT+GGG | 0.320876 | 4:+72594241 | MsG0480022442.01.T01:CDS |
GAAGAGTTGGAGTGGGGTTG+AGG | 0.330665 | 4:-72593497 | None:intergenic |
CATGGGGTTTGAGTGAATGC+TGG | 0.337025 | 4:-72594283 | None:intergenic |
GCCAAAATCCATTCACTATA+CGG | 0.342837 | 4:-72594872 | None:intergenic |
GGCCTTCCCTTACTGTTCAA+TGG | 0.344219 | 4:+72593462 | MsG0480022442.01.T01:five_prime_UTR |
TGTTGATGGGGAGGTGAATA+GGG | 0.344389 | 4:+72593772 | MsG0480022442.01.T01:CDS |
TTTCATGATGACTCAGGATT+GGG | 0.351497 | 4:+72595412 | MsG0480022442.01.T01:CDS |
ACATCGGTCTCTTTGATTTA+CGG | 0.356527 | 4:+72594915 | MsG0480022442.01.T01:CDS |
TTGTTGATGGGGAGGTGAAT+AGG | 0.360369 | 4:+72593771 | MsG0480022442.01.T01:CDS |
TCCGTATAGTGAATGGATTT+TGG | 0.364343 | 4:+72594871 | MsG0480022442.01.T01:CDS |
CTGATAGAAGGCTAATGGTT+TGG | 0.371708 | 4:+72595225 | MsG0480022442.01.T01:CDS |
CATAAACAGAGAATTGAAAT+AGG | 0.377730 | 4:+72595364 | MsG0480022442.01.T01:CDS |
CAAGAAGCATTGGCGCGAAT+AGG | 0.380633 | 4:+72593303 | None:intergenic |
ACACCATTACCTCTCTTTCA+TGG | 0.392547 | 4:-72594301 | None:intergenic |
GGGTGGCGAGGAGGAGTTTG+TGG | 0.394964 | 4:-72593529 | None:intergenic |
CACCATTACCTCTCTTTCAT+GGG | 0.396455 | 4:-72594300 | None:intergenic |
CTTTCAGTCCGTATAGTGAA+TGG | 0.398232 | 4:+72594864 | MsG0480022442.01.T01:CDS |
AAGAAGCATTGGCGCGAATA+GGG | 0.415403 | 4:+72593304 | None:intergenic |
TGATAGAAGGCTAATGGTTT+GGG | 0.415888 | 4:+72595226 | MsG0480022442.01.T01:CDS |
ACTCAGAGGATTCTTGTTGA+TGG | 0.422181 | 4:+72593758 | MsG0480022442.01.T01:CDS |
TAGTGCTGATAGAAGGCTAA+TGG | 0.425058 | 4:+72595220 | MsG0480022442.01.T01:CDS |
TGCATAATGAGAATTTGTTT+GGG | 0.426082 | 4:+72594207 | MsG0480022442.01.T01:CDS |
CTCAGAGGATTCTTGTTGAT+GGG | 0.427906 | 4:+72593759 | MsG0480022442.01.T01:CDS |
GTGTAGAGATGAGGTATTCC+AGG | 0.429704 | 4:+72595157 | MsG0480022442.01.T01:intron |
ATTTGCTTGTGGGATGTGTT+TGG | 0.433764 | 4:+72593995 | MsG0480022442.01.T01:CDS |
AATGAGAATTTGTTTGGGTC+TGG | 0.440769 | 4:+72594212 | MsG0480022442.01.T01:CDS |
ATTTCATGATGACTCAGGAT+TGG | 0.440864 | 4:+72595411 | MsG0480022442.01.T01:CDS |
TTCAGGATCTGCAGCGATGA+CGG | 0.441099 | 4:-72593621 | None:intergenic |
TCAGCGAGCATGAGGTAATT+GGG | 0.453601 | 4:-72593569 | None:intergenic |
ATGAAGAGATCGTAGAGAAG+AGG | 0.453906 | 4:-72593423 | None:intergenic |
CATCTTCTAGTGCTGATAGA+AGG | 0.454542 | 4:+72595213 | MsG0480022442.01.T01:CDS |
AAGAAGGGTATGGGCTGTCT+TGG | 0.455286 | 4:+72593924 | MsG0480022442.01.T01:CDS |
TGACCCTTCAACCTAAAATC+AGG | 0.455708 | 4:-72593896 | None:intergenic |
TTGAAGAAGAATTCTCCGTT+TGG | 0.456868 | 4:+72593389 | MsG0480022442.01.T01:five_prime_UTR |
TGATGCTGTTCATGTTTATG+AGG | 0.456896 | 4:+72594039 | MsG0480022442.01.T01:CDS |
AGTTGGTAATTTGGGATTTG+CGG | 0.462658 | 4:+72594249 | MsG0480022442.01.T01:CDS |
GTGGAGGTTAAAGGAAGAGT+TGG | 0.463186 | 4:-72593510 | None:intergenic |
ATGGGGAGGTGAATAGGGCT+CGG | 0.471067 | 4:+72593777 | MsG0480022442.01.T01:CDS |
TGAAGAGATCGTAGAGAAGA+GGG | 0.471634 | 4:-72593422 | None:intergenic |
GAGTGGGGTTGAGGAGGTGA+AGG | 0.476171 | 4:-72593488 | None:intergenic |
CTAATGGTTTGGGACCTAAC+AGG | 0.476493 | 4:+72595236 | MsG0480022442.01.T01:CDS |
GGTTAGGATCCCACTCTACC+TGG | 0.480679 | 4:-72595175 | None:intergenic |
TTTACTAAGGAGAGAGGGGA+GGG | 0.481005 | 4:+72593866 | MsG0480022442.01.T01:CDS |
GCCAACACTCCCTCGTGGTT+AGG | 0.483885 | 4:-72595191 | None:intergenic |
GCTTTATTTCATGATGACTC+AGG | 0.486753 | 4:+72595406 | MsG0480022442.01.T01:CDS |
TGAAGGGTCATGAGAAAGAA+GGG | 0.487057 | 4:+72593909 | MsG0480022442.01.T01:CDS |
TCAGGATCTGCAGCGATGAC+GGG | 0.487640 | 4:-72593620 | None:intergenic |
CAGCGATGACGGGTTGAGAT+GGG | 0.493487 | 4:-72593610 | None:intergenic |
GAGTTGGAGTGGGGTTGAGG+AGG | 0.500046 | 4:-72593494 | None:intergenic |
TGGGTTCTTCATCGGAAGTG+TGG | 0.501819 | 4:-72593550 | None:intergenic |
ATGGGGTTTGAGTGAATGCT+GGG | 0.505125 | 4:-72594282 | None:intergenic |
TTGAAGGGTCATGAGAAAGA+AGG | 0.507504 | 4:+72593908 | MsG0480022442.01.T01:CDS |
GCAGCGATGACGGGTTGAGA+TGG | 0.508458 | 4:-72593611 | None:intergenic |
TGATCATAAGATTTGCTTGT+GGG | 0.509495 | 4:+72593985 | MsG0480022442.01.T01:CDS |
GAGGTAATTGGGTTCTTCAT+CGG | 0.512602 | 4:-72593558 | None:intergenic |
GGTCATGAGAAAGAAGGGTA+TGG | 0.513903 | 4:+72593914 | MsG0480022442.01.T01:CDS |
AAGGAAGCCATTGAACAGTA+AGG | 0.522364 | 4:-72593469 | None:intergenic |
TGAAAACCCTATTCTTCCAA+AGG | 0.526040 | 4:+72593640 | MsG0480022442.01.T01:CDS |
CTCGCTGAATCCACTCTCCC+CGG | 0.528576 | 4:+72593584 | MsG0480022442.01.T01:CDS |
ATGAGGTATTCCAGGTAGAG+TGG | 0.529343 | 4:+72595165 | MsG0480022442.01.T01:CDS |
AGATGGGTTTCCGGGGAGAG+TGG | 0.533865 | 4:-72593594 | None:intergenic |
TTCATCTCACACCTCTCGCA+TGG | 0.533957 | 4:+72593441 | MsG0480022442.01.T01:five_prime_UTR |
GAGAATTTGTTTGGGTCTGG+TGG | 0.535452 | 4:+72594215 | MsG0480022442.01.T01:CDS |
TCCTAACCACGAGGGAGTGT+TGG | 0.537952 | 4:+72595190 | MsG0480022442.01.T01:CDS |
GAGGGTGTTTCTCTTCCAAA+CGG | 0.545132 | 4:-72593404 | None:intergenic |
GGGTATGGGCTGTCTTGGAG+TGG | 0.547685 | 4:+72593929 | MsG0480022442.01.T01:CDS |
GTTAAAGGAAGAGTTGGAGT+GGG | 0.555334 | 4:-72593504 | None:intergenic |
GGGTTCTTCATCGGAAGTGT+GGG | 0.556214 | 4:-72593549 | None:intergenic |
TCAGAGGATTCTTGTTGATG+GGG | 0.558512 | 4:+72593760 | MsG0480022442.01.T01:CDS |
TGCGAAGACTTGTAATTCAG+AGG | 0.566003 | 4:+72593829 | MsG0480022442.01.T01:CDS |
CTTTGATTTACGGAAGCTTG+AGG | 0.566055 | 4:+72594925 | MsG0480022442.01.T01:CDS |
TTAAAGGAAGAGTTGGAGTG+GGG | 0.573089 | 4:-72593503 | None:intergenic |
GTCATGAGAAAGAAGGGTAT+GGG | 0.577823 | 4:+72593915 | MsG0480022442.01.T01:CDS |
GAGGATTCTTGTTGATGGGG+AGG | 0.577872 | 4:+72593763 | MsG0480022442.01.T01:CDS |
TGGGGAGGTGAATAGGGCTC+GGG | 0.577992 | 4:+72593778 | MsG0480022442.01.T01:CDS |
TTCTTCATCGGAAGTGTGGG+TGG | 0.585703 | 4:-72593546 | None:intergenic |
CATCGGAAGTGTGGGTGGCG+AGG | 0.587425 | 4:-72593541 | None:intergenic |
CGGAAGTGTGGGTGGCGAGG+AGG | 0.592106 | 4:-72593538 | None:intergenic |
ACCATTACCTCTCTTTCATG+GGG | 0.593239 | 4:-72594299 | None:intergenic |
GCAACAACATTCGCATTCTG+TGG | 0.595065 | 4:-72593806 | None:intergenic |
TTCATGATGACTCAGGATTG+GGG | 0.595806 | 4:+72595413 | MsG0480022442.01.T01:CDS |
GGTTAAAGGAAGAGTTGGAG+TGG | 0.603090 | 4:-72593505 | None:intergenic |
TGAGGTATTCCAGGTAGAGT+GGG | 0.604028 | 4:+72595166 | MsG0480022442.01.T01:CDS |
CGGGTTGAGATGGGTTTCCG+GGG | 0.604951 | 4:-72593601 | None:intergenic |
TGGCGAGGAGGAGTTTGTGG+AGG | 0.615770 | 4:-72593526 | None:intergenic |
TAAATCAAAGAGACCGATGT+CGG | 0.616345 | 4:-72594912 | None:intergenic |
GAGTGGATTCAGCGAGCATG+AGG | 0.617545 | 4:-72593577 | None:intergenic |
ACTCAAACCCCATGAAAGAG+AGG | 0.622281 | 4:+72594292 | MsG0480022442.01.T01:CDS |
AGTCATCATGAAATAAAGCA+TGG | 0.622343 | 4:-72595402 | None:intergenic |
GTGTGGTTGAAGATGTGTCT+TGG | 0.629529 | 4:+72594180 | MsG0480022442.01.T01:CDS |
AGCCATTGAACAGTAAGGGA+AGG | 0.631871 | 4:-72593464 | None:intergenic |
AGGAAGCCATTGAACAGTAA+GGG | 0.642100 | 4:-72593468 | None:intergenic |
ATGATCATAAGATTTGCTTG+TGG | 0.642906 | 4:+72593984 | MsG0480022442.01.T01:CDS |
CGAAACCGAAAACGAAGCAG+AGG | 0.656030 | 4:+72593366 | MsG0480022442.01.T01:five_prime_UTR |
GCATCTTCAGACACCGACAT+CGG | 0.660753 | 4:+72594899 | MsG0480022442.01.T01:CDS |
GTGTTAGGGACATGAAAGTG+TGG | 0.665723 | 4:+72594163 | MsG0480022442.01.T01:intron |
GTAAGGGAAGGCCATGCGAG+AGG | 0.666304 | 4:-72593452 | None:intergenic |
TGGTGGAGATGACTGCAAGT+TGG | 0.682617 | 4:+72594232 | MsG0480022442.01.T01:CDS |
TGGCTACTTAGAAAATGCAG+TGG | 0.707079 | 4:-72594950 | None:intergenic |
TATAGGTGGAGATTACTCAG+AGG | 0.710079 | 4:+72593744 | MsG0480022442.01.T01:intron |
AAGATGCCAACACTCCCTCG+TGG | 0.712873 | 4:-72595196 | None:intergenic |
GAGTGGGATCCTAACCACGA+GGG | 0.751517 | 4:+72595182 | MsG0480022442.01.T01:CDS |
AGAGTGGGATCCTAACCACG+AGG | 0.769525 | 4:+72595181 | MsG0480022442.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTTAAATTCCAATTAATG+GGG | + | Chr4:72594634-72594653 | MsG0480022442.01.T01:intron | 20.0% |
!! | ATTCTTGAGAAAAACAAAAA+TGG | + | Chr4:72593333-72593352 | MsG0480022442.01.T01:five_prime_UTR | 20.0% |
!! | GAAAAAAAATCAAAAACCTT+TGG | - | Chr4:72593659-72593678 | None:intergenic | 20.0% |
!! | GAAGTTAAATTCCAATTAAT+GGG | + | Chr4:72594633-72594652 | MsG0480022442.01.T01:intron | 20.0% |
!! | TAAGAAAATGATAATCATCA+TGG | - | Chr4:72594498-72594517 | None:intergenic | 20.0% |
!!! | ATGAGAATTGATTTGATAAT+TGG | + | Chr4:72594067-72594086 | MsG0480022442.01.T01:intron | 20.0% |
!!! | GATTATCATTTTCTTATACA+CGG | + | Chr4:72594502-72594521 | MsG0480022442.01.T01:intron | 20.0% |
!!! | TGTTTGTTGTTTGTTTTTAT+AGG | + | Chr4:72593727-72593746 | MsG0480022442.01.T01:intron | 20.0% |
!!! | TTATGTGTTTGATTTTACTA+AGG | + | Chr4:72593853-72593872 | MsG0480022442.01.T01:CDS | 20.0% |
! | ACTGAAAACATAATCAAACA+AGG | - | Chr4:72594698-72594717 | None:intergenic | 25.0% |
! | AGTTAAATTCCAATTAATGG+GGG | + | Chr4:72594635-72594654 | MsG0480022442.01.T01:intron | 25.0% |
! | CATAAACAGAGAATTGAAAT+AGG | + | Chr4:72595364-72595383 | MsG0480022442.01.T01:CDS | 25.0% |
! | GGAAGTTAAATTCCAATTAA+TGG | + | Chr4:72594632-72594651 | MsG0480022442.01.T01:intron | 25.0% |
! | TATTACTATCTTGTAGTTGA+TGG | + | Chr4:72595021-72595040 | MsG0480022442.01.T01:intron | 25.0% |
! | TCTCATAATGTCATAAATGA+AGG | - | Chr4:72594416-72594435 | None:intergenic | 25.0% |
!! | TGATAATTGGTGTGTTTTAT+TGG | + | Chr4:72594080-72594099 | MsG0480022442.01.T01:intron | 25.0% |
!! | TGCATAATGAGAATTTGTTT+GGG | + | Chr4:72594207-72594226 | MsG0480022442.01.T01:CDS | 25.0% |
!! | TTGCATAATGAGAATTTGTT+TGG | + | Chr4:72594206-72594225 | MsG0480022442.01.T01:CDS | 25.0% |
!!! | AACTGATAAGTTTTTAGCTT+TGG | + | Chr4:72595090-72595109 | MsG0480022442.01.T01:intron | 25.0% |
!!! | CTTCATAATATTTGTTGTGT+AGG | + | Chr4:72594326-72594345 | MsG0480022442.01.T01:intron | 25.0% |
!!! | TTGTTGTTTGTTTTTATAGG+TGG | + | Chr4:72593730-72593749 | MsG0480022442.01.T01:intron | 25.0% |
AAACAAGGTAACTTCTCTAT+TGG | - | Chr4:72594683-72594702 | None:intergenic | 30.0% | |
AAACCAAATACGTGAGTAAA+AGG | - | Chr4:72595127-72595146 | None:intergenic | 30.0% | |
AAAGAAACAAAGAATTCCGT+AGG | - | Chr4:72595276-72595295 | None:intergenic | 30.0% | |
ACAAACAACAAACATCATTC+AGG | - | Chr4:72593721-72593740 | None:intergenic | 30.0% | |
ACATACAAAATCGAATCTAC+AGG | - | Chr4:72595067-72595086 | None:intergenic | 30.0% | |
AGTCATCATGAAATAAAGCA+TGG | - | Chr4:72595405-72595424 | None:intergenic | 30.0% | |
CAAAAATACAAACAGACATC+AGG | - | Chr4:72594779-72594798 | None:intergenic | 30.0% | |
CTTGAGAAAAACAAAAATGG+CGG | + | Chr4:72593336-72593355 | MsG0480022442.01.T01:five_prime_UTR | 30.0% | |
GTTAAATTCCAATTAATGGG+GGG | + | Chr4:72594636-72594655 | MsG0480022442.01.T01:intron | 30.0% | |
TATGAATCTGTGATAGATGA+AGG | - | Chr4:72594985-72595004 | None:intergenic | 30.0% | |
TCTTCATCAAGCATATGATA+TGG | + | Chr4:72594358-72594377 | MsG0480022442.01.T01:intron | 30.0% | |
! | AATTGGAATTTAACTTCCGA+TGG | - | Chr4:72594630-72594649 | None:intergenic | 30.0% |
! | ATGATCATAAGATTTGCTTG+TGG | + | Chr4:72593984-72594003 | MsG0480022442.01.T01:CDS | 30.0% |
! | CAAAAACCTTTGGAAGAATA+GGG | - | Chr4:72593649-72593668 | None:intergenic | 30.0% |
! | TCAAAAACCTTTGGAAGAAT+AGG | - | Chr4:72593650-72593669 | None:intergenic | 30.0% |
! | TGATCATAAGATTTGCTTGT+GGG | + | Chr4:72593985-72594004 | MsG0480022442.01.T01:CDS | 30.0% |
! | TTGATTTTACTAAGGAGAGA+GGG | + | Chr4:72593861-72593880 | MsG0480022442.01.T01:CDS | 30.0% |
!! | ATGTCTGTTTGTATTTTTGC+TGG | + | Chr4:72594780-72594799 | MsG0480022442.01.T01:intron | 30.0% |
!! | TAATATTTGTTGTGTAGGCT+AGG | + | Chr4:72594331-72594350 | MsG0480022442.01.T01:intron | 30.0% |
!! | TTTGATTTTACTAAGGAGAG+AGG | + | Chr4:72593860-72593879 | MsG0480022442.01.T01:CDS | 30.0% |
!! | TTTTTCAATGTGTAGAGATG+AGG | + | Chr4:72595148-72595167 | MsG0480022442.01.T01:intron | 30.0% |
!!! | AATCCTGATTTTAGGTTGAA+GGG | + | Chr4:72593893-72593912 | MsG0480022442.01.T01:CDS | 30.0% |
!!! | TAATCCTGATTTTAGGTTGA+AGG | + | Chr4:72593892-72593911 | MsG0480022442.01.T01:CDS | 30.0% |
ATTATGAGAACCAACCCAAT+TGG | + | Chr4:72594427-72594446 | MsG0480022442.01.T01:intron | 35.0% | |
ATTTCATGATGACTCAGGAT+TGG | + | Chr4:72595411-72595430 | MsG0480022442.01.T01:CDS | 35.0% | |
GCCAAAATCCATTCACTATA+CGG | - | Chr4:72594875-72594894 | None:intergenic | 35.0% | |
GTCAAAACCTGCAATGAATT+TGG | + | Chr4:72594471-72594490 | MsG0480022442.01.T01:intron | 35.0% | |
TAAATCAAAGAGACCGATGT+CGG | - | Chr4:72594915-72594934 | None:intergenic | 35.0% | |
TGAAAACCCTATTCTTCCAA+AGG | + | Chr4:72593640-72593659 | MsG0480022442.01.T01:CDS | 35.0% | |
TGAAATTGTCGTTGAACTTG+TGG | + | Chr4:72594134-72594153 | MsG0480022442.01.T01:intron | 35.0% | |
TGATAGAAGGCTAATGGTTT+GGG | + | Chr4:72595226-72595245 | MsG0480022442.01.T01:CDS | 35.0% | |
TGATGCTGTTCATGTTTATG+AGG | + | Chr4:72594039-72594058 | MsG0480022442.01.T01:CDS | 35.0% | |
TTATGAGAACCAACCCAATT+GGG | + | Chr4:72594428-72594447 | MsG0480022442.01.T01:intron | 35.0% | |
TTGAAGAAGAATTCTCCGTT+TGG | + | Chr4:72593389-72593408 | MsG0480022442.01.T01:five_prime_UTR | 35.0% | |
TTTCATGATGACTCAGGATT+GGG | + | Chr4:72595412-72595431 | MsG0480022442.01.T01:CDS | 35.0% | |
! | AAGAATGGGTATCTTTTGAG+TGG | + | Chr4:72593956-72593975 | MsG0480022442.01.T01:CDS | 35.0% |
! | AATGAGAATTTGTTTGGGTC+TGG | + | Chr4:72594212-72594231 | MsG0480022442.01.T01:CDS | 35.0% |
! | ACATCGGTCTCTTTGATTTA+CGG | + | Chr4:72594915-72594934 | MsG0480022442.01.T01:CDS | 35.0% |
! | AGGGTTGTAATCCTGATTTT+AGG | + | Chr4:72593885-72593904 | MsG0480022442.01.T01:CDS | 35.0% |
! | AGTGTCTTCTTTTACCTGTT+AGG | - | Chr4:72595253-72595272 | None:intergenic | 35.0% |
! | TGATTTTACTAAGGAGAGAG+GGG | + | Chr4:72593862-72593881 | MsG0480022442.01.T01:CDS | 35.0% |
! | TTTGGAAGAATAGGGTTTTC+AGG | - | Chr4:72593641-72593660 | None:intergenic | 35.0% |
!! | AGTTGGTAATTTGGGATTTG+CGG | + | Chr4:72594249-72594268 | MsG0480022442.01.T01:CDS | 35.0% |
!! | ATGACTGCAAGTTGGTAATT+TGG | + | Chr4:72594240-72594259 | MsG0480022442.01.T01:CDS | 35.0% |
!! | GCTTTATTTCATGATGACTC+AGG | + | Chr4:72595406-72595425 | MsG0480022442.01.T01:CDS | 35.0% |
!! | TCCGTATAGTGAATGGATTT+TGG | + | Chr4:72594871-72594890 | MsG0480022442.01.T01:CDS | 35.0% |
!! | TGACTGCAAGTTGGTAATTT+GGG | + | Chr4:72594241-72594260 | MsG0480022442.01.T01:CDS | 35.0% |
!!! | AACTTGTGGTTTTGTGTGTT+AGG | + | Chr4:72594148-72594167 | MsG0480022442.01.T01:intron | 35.0% |
!!! | ACTTGTGGTTTTGTGTGTTA+GGG | + | Chr4:72594149-72594168 | MsG0480022442.01.T01:intron | 35.0% |
!!! | CTTGGAGTGGTTTTAAGAAT+GGG | + | Chr4:72593942-72593961 | MsG0480022442.01.T01:CDS | 35.0% |
!!! | GTTTTATTGGTCTTGTTGTG+AGG | + | Chr4:72594093-72594112 | MsG0480022442.01.T01:intron | 35.0% |
!!! | TCTTGGAGTGGTTTTAAGAA+TGG | + | Chr4:72593941-72593960 | MsG0480022442.01.T01:CDS | 35.0% |
AAGGAAGCCATTGAACAGTA+AGG | - | Chr4:72593472-72593491 | None:intergenic | 40.0% | |
ACACCATTACCTCTCTTTCA+TGG | - | Chr4:72594304-72594323 | None:intergenic | 40.0% | |
ACCATTACCTCTCTTTCATG+GGG | - | Chr4:72594302-72594321 | None:intergenic | 40.0% | |
ACTCAGAGGATTCTTGTTGA+TGG | + | Chr4:72593758-72593777 | MsG0480022442.01.T01:CDS | 40.0% | |
AGGAAGCCATTGAACAGTAA+GGG | - | Chr4:72593471-72593490 | None:intergenic | 40.0% | |
ATAGCATACAAAGCCCCAAT+TGG | - | Chr4:72594445-72594464 | None:intergenic | 40.0% | |
ATGAAGAGATCGTAGAGAAG+AGG | - | Chr4:72593426-72593445 | None:intergenic | 40.0% | |
ATTTGCTTGTGGGATGTGTT+TGG | + | Chr4:72593995-72594014 | MsG0480022442.01.T01:CDS | 40.0% | |
CACCATTACCTCTCTTTCAT+GGG | - | Chr4:72594303-72594322 | None:intergenic | 40.0% | |
CAGGCATTTCATCAAACAGT+TGG | - | Chr4:72593702-72593721 | None:intergenic | 40.0% | |
CCTATTAGAACATACTGTCC+AGG | + | Chr4:72594595-72594614 | MsG0480022442.01.T01:intron | 40.0% | |
CCTGGACAGTATGTTCTAAT+AGG | - | Chr4:72594598-72594617 | None:intergenic | 40.0% | |
CTCAGAGGATTCTTGTTGAT+GGG | + | Chr4:72593759-72593778 | MsG0480022442.01.T01:CDS | 40.0% | |
CTGATAGAAGGCTAATGGTT+TGG | + | Chr4:72595225-72595244 | MsG0480022442.01.T01:CDS | 40.0% | |
CTTTCAGTCCGTATAGTGAA+TGG | + | Chr4:72594864-72594883 | MsG0480022442.01.T01:CDS | 40.0% | |
GAGGTAATTGGGTTCTTCAT+CGG | - | Chr4:72593561-72593580 | None:intergenic | 40.0% | |
GGTAAAAGAAGACACTCCTA+CGG | + | Chr4:72595257-72595276 | MsG0480022442.01.T01:intron | 40.0% | |
GTTAAAGGAAGAGTTGGAGT+GGG | - | Chr4:72593507-72593526 | None:intergenic | 40.0% | |
TAGCATACAAAGCCCCAATT+GGG | - | Chr4:72594444-72594463 | None:intergenic | 40.0% | |
TATAGGTGGAGATTACTCAG+AGG | + | Chr4:72593744-72593763 | MsG0480022442.01.T01:intron | 40.0% | |
TATCTCAGATTGAGCAACCT+CGG | - | Chr4:72594556-72594575 | None:intergenic | 40.0% | |
TATGAGAACCAACCCAATTG+GGG | + | Chr4:72594429-72594448 | MsG0480022442.01.T01:intron | 40.0% | |
TCAGAGGATTCTTGTTGATG+GGG | + | Chr4:72593760-72593779 | MsG0480022442.01.T01:CDS | 40.0% | |
TCATGGTCCAAATTCATTGC+AGG | - | Chr4:72594481-72594500 | None:intergenic | 40.0% | |
TGAAGAGATCGTAGAGAAGA+GGG | - | Chr4:72593425-72593444 | None:intergenic | 40.0% | |
TGAAGGGTCATGAGAAAGAA+GGG | + | Chr4:72593909-72593928 | MsG0480022442.01.T01:CDS | 40.0% | |
TGACCCTTCAACCTAAAATC+AGG | - | Chr4:72593899-72593918 | None:intergenic | 40.0% | |
TGCGAAGACTTGTAATTCAG+AGG | + | Chr4:72593829-72593848 | MsG0480022442.01.T01:CDS | 40.0% | |
TGGCTACTTAGAAAATGCAG+TGG | - | Chr4:72594953-72594972 | None:intergenic | 40.0% | |
TTAAAGGAAGAGTTGGAGTG+GGG | - | Chr4:72593506-72593525 | None:intergenic | 40.0% | |
TTCATGATGACTCAGGATTG+GGG | + | Chr4:72595413-72595432 | MsG0480022442.01.T01:CDS | 40.0% | |
TTGAAGGGTCATGAGAAAGA+AGG | + | Chr4:72593908-72593927 | MsG0480022442.01.T01:CDS | 40.0% | |
! | AATACGTGAGTAAAAGGCAC+TGG | - | Chr4:72595121-72595140 | None:intergenic | 40.0% |
! | AATTGGGGCTTTGTATGCTA+TGG | + | Chr4:72594444-72594463 | MsG0480022442.01.T01:intron | 40.0% |
! | CTTTGATTTACGGAAGCTTG+AGG | + | Chr4:72594925-72594944 | MsG0480022442.01.T01:CDS | 40.0% |
! | GTCATGAGAAAGAAGGGTAT+GGG | + | Chr4:72593915-72593934 | MsG0480022442.01.T01:CDS | 40.0% |
! | GTGCCTTTTACTCACGTATT+TGG | + | Chr4:72595121-72595140 | MsG0480022442.01.T01:intron | 40.0% |
! | TTCAACCTCTGCTTCGTTTT+CGG | - | Chr4:72593374-72593393 | None:intergenic | 40.0% |
!! | CATCTTCTAGTGCTGATAGA+AGG | + | Chr4:72595213-72595232 | MsG0480022442.01.T01:CDS | 40.0% |
!! | GTTGTATGCTCGTTTTGAAC+AGG | + | Chr4:72594829-72594848 | MsG0480022442.01.T01:intron | 40.0% |
!! | TAGTGCTGATAGAAGGCTAA+TGG | + | Chr4:72595220-72595239 | MsG0480022442.01.T01:CDS | 40.0% |
ACCCCATGAAAGAGAGGTAA+TGG | + | Chr4:72594298-72594317 | MsG0480022442.01.T01:intron | 45.0% | |
ACTCAAACCCCATGAAAGAG+AGG | + | Chr4:72594292-72594311 | MsG0480022442.01.T01:CDS | 45.0% | |
AGCCATTGAACAGTAAGGGA+AGG | - | Chr4:72593467-72593486 | None:intergenic | 45.0% | |
AGGAAAAGCCCCCCATTAAT+TGG | - | Chr4:72594647-72594666 | None:intergenic | 45.0% | |
ATACAAAGCCCCAATTGGGT+TGG | - | Chr4:72594440-72594459 | None:intergenic | 45.0% | |
ATAGATGAAGGTCGTACGTG+TGG | - | Chr4:72594973-72594992 | None:intergenic | 45.0% | |
ATCTCAGATTGAGCAACCTC+GGG | - | Chr4:72594555-72594574 | None:intergenic | 45.0% | |
ATGGGGTTTGAGTGAATGCT+GGG | - | Chr4:72594285-72594304 | None:intergenic | 45.0% | |
GAGGAGTTTGTGGAGGTTAA+AGG | - | Chr4:72593522-72593541 | None:intergenic | 45.0% | |
GCAACAACATTCGCATTCTG+TGG | - | Chr4:72593809-72593828 | None:intergenic | 45.0% | |
GGTCATGAGAAAGAAGGGTA+TGG | + | Chr4:72593914-72593933 | MsG0480022442.01.T01:CDS | 45.0% | |
GGTTAAAGGAAGAGTTGGAG+TGG | - | Chr4:72593508-72593527 | None:intergenic | 45.0% | |
GTGGAGGTTAAAGGAAGAGT+TGG | - | Chr4:72593513-72593532 | None:intergenic | 45.0% | |
GTGTGGTTGAAGATGTGTCT+TGG | + | Chr4:72594180-72594199 | MsG0480022442.01.T01:CDS | 45.0% | |
GTGTTAGGGACATGAAAGTG+TGG | + | Chr4:72594163-72594182 | MsG0480022442.01.T01:intron | 45.0% | |
TCAGCGAGCATGAGGTAATT+GGG | - | Chr4:72593572-72593591 | None:intergenic | 45.0% | |
TTCAGCGAGCATGAGGTAAT+TGG | - | Chr4:72593573-72593592 | None:intergenic | 45.0% | |
TTTACTAAGGAGAGAGGGGA+GGG | + | Chr4:72593866-72593885 | MsG0480022442.01.T01:CDS | 45.0% | |
! | ATGAGGTATTCCAGGTAGAG+TGG | + | Chr4:72595165-72595184 | MsG0480022442.01.T01:CDS | 45.0% |
! | CTAATGGTTTGGGACCTAAC+AGG | + | Chr4:72595236-72595255 | MsG0480022442.01.T01:CDS | 45.0% |
! | GAGAATTTGTTTGGGTCTGG+TGG | + | Chr4:72594215-72594234 | MsG0480022442.01.T01:CDS | 45.0% |
! | GGCTTTTCCTGCAAAAATGG+GGG | + | Chr4:72594657-72594676 | MsG0480022442.01.T01:intron | 45.0% |
! | GGGCTTTTCCTGCAAAAATG+GGG | + | Chr4:72594656-72594675 | MsG0480022442.01.T01:intron | 45.0% |
! | GGGGCTTTTCCTGCAAAAAT+GGG | + | Chr4:72594655-72594674 | MsG0480022442.01.T01:intron | 45.0% |
! | GTGTAGAGATGAGGTATTCC+AGG | + | Chr4:72595157-72595176 | MsG0480022442.01.T01:intron | 45.0% |
! | TGAGGTATTCCAGGTAGAGT+GGG | + | Chr4:72595166-72595185 | MsG0480022442.01.T01:CDS | 45.0% |
! | TGTTGATGGGGAGGTGAATA+GGG | + | Chr4:72593772-72593791 | MsG0480022442.01.T01:CDS | 45.0% |
! | TTGTTGATGGGGAGGTGAAT+AGG | + | Chr4:72593771-72593790 | MsG0480022442.01.T01:CDS | 45.0% |
! | TTTTACTAAGGAGAGAGGGG+AGG | + | Chr4:72593865-72593884 | MsG0480022442.01.T01:CDS | 45.0% |
!! | GAGGGTGTTTCTCTTCCAAA+CGG | - | Chr4:72593407-72593426 | None:intergenic | 45.0% |
CATGGGGTTTGAGTGAATGC+TGG | - | Chr4:72594286-72594305 | None:intergenic | 50.0% | |
CGAAACCGAAAACGAAGCAG+AGG | + | Chr4:72593366-72593385 | MsG0480022442.01.T01:five_prime_UTR | 50.0% | |
GCATCTTCAGACACCGACAT+CGG | + | Chr4:72594899-72594918 | MsG0480022442.01.T01:CDS | 50.0% | |
GGCCTTCCCTTACTGTTCAA+TGG | + | Chr4:72593462-72593481 | MsG0480022442.01.T01:five_prime_UTR | 50.0% | |
GTCCAGGAGAAACTCACCAT+CGG | + | Chr4:72594611-72594630 | MsG0480022442.01.T01:intron | 50.0% | |
TCTCAGATTGAGCAACCTCG+GGG | - | Chr4:72594554-72594573 | None:intergenic | 50.0% | |
TGGGTTCTTCATCGGAAGTG+TGG | - | Chr4:72593553-72593572 | None:intergenic | 50.0% | |
TGGTGGAGATGACTGCAAGT+TGG | + | Chr4:72594232-72594251 | MsG0480022442.01.T01:CDS | 50.0% | |
TTCAGGATCTGCAGCGATGA+CGG | - | Chr4:72593624-72593643 | None:intergenic | 50.0% | |
TTCATCTCACACCTCTCGCA+TGG | + | Chr4:72593441-72593460 | MsG0480022442.01.T01:five_prime_UTR | 50.0% | |
TTCCGATGGTGAGTTTCTCC+TGG | - | Chr4:72594616-72594635 | None:intergenic | 50.0% | |
! | AAGAAGGGTATGGGCTGTCT+TGG | + | Chr4:72593924-72593943 | MsG0480022442.01.T01:CDS | 50.0% |
! | GAGGATTCTTGTTGATGGGG+AGG | + | Chr4:72593763-72593782 | MsG0480022442.01.T01:CDS | 50.0% |
! | GGGGGCTTTTCCTGCAAAAA+TGG | + | Chr4:72594654-72594673 | MsG0480022442.01.T01:intron | 50.0% |
! | GGGTTCTTCATCGGAAGTGT+GGG | - | Chr4:72593552-72593571 | None:intergenic | 50.0% |
! | TTCTTCATCGGAAGTGTGGG+TGG | - | Chr4:72593549-72593568 | None:intergenic | 50.0% |
!! | CTATTGGCCCCCATTTTTGC+AGG | - | Chr4:72594667-72594686 | None:intergenic | 50.0% |
AAGATGCCAACACTCCCTCG+TGG | - | Chr4:72595199-72595218 | None:intergenic | 55.0% | |
AGAGTGGGATCCTAACCACG+AGG | + | Chr4:72595181-72595200 | MsG0480022442.01.T01:CDS | 55.0% | |
ATGGGGAGGTGAATAGGGCT+CGG | + | Chr4:72593777-72593796 | MsG0480022442.01.T01:CDS | 55.0% | |
CTCAGATTGAGCAACCTCGG+GGG | - | Chr4:72594553-72594572 | None:intergenic | 55.0% | |
GAAGAGTTGGAGTGGGGTTG+AGG | - | Chr4:72593500-72593519 | None:intergenic | 55.0% | |
GAGTGGGATCCTAACCACGA+GGG | + | Chr4:72595182-72595201 | MsG0480022442.01.T01:CDS | 55.0% | |
GATTGATGTTTAGCCCCCCG+AGG | + | Chr4:72594536-72594555 | MsG0480022442.01.T01:intron | 55.0% | |
GGTTAGGATCCCACTCTACC+TGG | - | Chr4:72595178-72595197 | None:intergenic | 55.0% | |
TCAGATTGAGCAACCTCGGG+GGG | - | Chr4:72594552-72594571 | None:intergenic | 55.0% | |
TCAGGATCTGCAGCGATGAC+GGG | - | Chr4:72593623-72593642 | None:intergenic | 55.0% | |
! | ACGGGTTGAGATGGGTTTCC+GGG | - | Chr4:72593605-72593624 | None:intergenic | 55.0% |
! | GAGTGGATTCAGCGAGCATG+AGG | - | Chr4:72593580-72593599 | None:intergenic | 55.0% |
! | TCCTAACCACGAGGGAGTGT+TGG | + | Chr4:72595190-72595209 | MsG0480022442.01.T01:CDS | 55.0% |
!! | CAGCGATGACGGGTTGAGAT+GGG | - | Chr4:72593613-72593632 | None:intergenic | 55.0% |
!! | GACGGGTTGAGATGGGTTTC+CGG | - | Chr4:72593606-72593625 | None:intergenic | 55.0% |
CTCGCTGAATCCACTCTCCC+CGG | + | Chr4:72593584-72593603 | MsG0480022442.01.T01:CDS | 60.0% | |
GAGTGGGGTTGAGGAGGTGA+AGG | - | Chr4:72593491-72593510 | None:intergenic | 60.0% | |
GAGTTGGAGTGGGGTTGAGG+AGG | - | Chr4:72593497-72593516 | None:intergenic | 60.0% | |
GCCAACACTCCCTCGTGGTT+AGG | - | Chr4:72595194-72595213 | None:intergenic | 60.0% | |
GTAAGGGAAGGCCATGCGAG+AGG | - | Chr4:72593455-72593474 | None:intergenic | 60.0% | |
TGGCGAGGAGGAGTTTGTGG+AGG | - | Chr4:72593529-72593548 | None:intergenic | 60.0% | |
TGGGGAGGTGAATAGGGCTC+GGG | + | Chr4:72593778-72593797 | MsG0480022442.01.T01:CDS | 60.0% | |
! | AGATGGGTTTCCGGGGAGAG+TGG | - | Chr4:72593597-72593616 | None:intergenic | 60.0% |
! | CGGGTTGAGATGGGTTTCCG+GGG | - | Chr4:72593604-72593623 | None:intergenic | 60.0% |
! | GGGTATGGGCTGTCTTGGAG+TGG | + | Chr4:72593929-72593948 | MsG0480022442.01.T01:CDS | 60.0% |
!! | GCAGCGATGACGGGTTGAGA+TGG | - | Chr4:72593614-72593633 | None:intergenic | 60.0% |
GGGTGGCGAGGAGGAGTTTG+TGG | - | Chr4:72593532-72593551 | None:intergenic | 65.0% | |
! | CATCGGAAGTGTGGGTGGCG+AGG | - | Chr4:72593544-72593563 | None:intergenic | 65.0% |
! | CGGAAGTGTGGGTGGCGAGG+AGG | - | Chr4:72593541-72593560 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 72593311 | 72595444 | 72593311 | ID=MsG0480022442.01;Name=MsG0480022442.01 |
Chr4 | mRNA | 72593311 | 72595444 | 72593311 | ID=MsG0480022442.01.T01;Parent=MsG0480022442.01;Name=MsG0480022442.01.T01;_AED=0.50;_eAED=0.54;_QI=270|0.8|0.83|1|1|1|6|0|279 |
Chr4 | exon | 72593311 | 72593661 | 72593311 | ID=MsG0480022442.01.T01:exon:10971;Parent=MsG0480022442.01.T01 |
Chr4 | exon | 72593749 | 72594060 | 72593749 | ID=MsG0480022442.01.T01:exon:10972;Parent=MsG0480022442.01.T01 |
Chr4 | exon | 72594170 | 72594313 | 72594170 | ID=MsG0480022442.01.T01:exon:10973;Parent=MsG0480022442.01.T01 |
Chr4 | exon | 72594851 | 72594975 | 72594851 | ID=MsG0480022442.01.T01:exon:10974;Parent=MsG0480022442.01.T01 |
Chr4 | exon | 72595163 | 72595257 | 72595163 | ID=MsG0480022442.01.T01:exon:10975;Parent=MsG0480022442.01.T01 |
Chr4 | exon | 72595362 | 72595444 | 72595362 | ID=MsG0480022442.01.T01:exon:10976;Parent=MsG0480022442.01.T01 |
Chr4 | five_prime_UTR | 72593311 | 72593580 | 72593311 | ID=MsG0480022442.01.T01:five_prime_utr;Parent=MsG0480022442.01.T01 |
Chr4 | CDS | 72593581 | 72593661 | 72593581 | ID=MsG0480022442.01.T01:cds;Parent=MsG0480022442.01.T01 |
Chr4 | CDS | 72593749 | 72594060 | 72593749 | ID=MsG0480022442.01.T01:cds;Parent=MsG0480022442.01.T01 |
Chr4 | CDS | 72594170 | 72594313 | 72594170 | ID=MsG0480022442.01.T01:cds;Parent=MsG0480022442.01.T01 |
Chr4 | CDS | 72594851 | 72594975 | 72594851 | ID=MsG0480022442.01.T01:cds;Parent=MsG0480022442.01.T01 |
Chr4 | CDS | 72595163 | 72595257 | 72595163 | ID=MsG0480022442.01.T01:cds;Parent=MsG0480022442.01.T01 |
Chr4 | CDS | 72595362 | 72595444 | 72595362 | ID=MsG0480022442.01.T01:cds;Parent=MsG0480022442.01.T01 |
Gene Sequence |
Protein sequence |