Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006133.01.T01 | XP_013470410.1 | 88.837 | 215 | 15 | 1 | 2 | 216 | 5 | 210 | 8.17E-120 | 349 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006133.01.T01 | Q8LDF9 | 54.217 | 166 | 66 | 5 | 4 | 162 | 15 | 177 | 3.22E-42 | 145 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006133.01.T01 | A0A072VSQ8 | 88.837 | 215 | 15 | 1 | 2 | 216 | 5 | 210 | 3.90e-120 | 349 |
Gene ID | Type | Classification |
---|---|---|
MsG0180006133.01.T01 | TR | HMG |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047815.01 | MsG0180006133.01 | 0.865999 | 3.928741e-65 | 1.303854e-61 |
MsG0080048258.01 | MsG0180006133.01 | 0.864855 | 9.002967e-65 | 2.868125e-61 |
MsG0080048311.01 | MsG0180006133.01 | 0.800630 | 1.316719e-48 | 6.161044e-46 |
MsG0080048775.01 | MsG0180006133.01 | 0.884611 | 1.653369e-71 | 1.098187e-67 |
MsG0080048781.01 | MsG0180006133.01 | 0.911873 | 3.710669e-83 | 8.120439e-79 |
MsG0080048797.01 | MsG0180006133.01 | 0.805211 | 1.489522e-49 | 7.834452e-47 |
MsG0080049140.01 | MsG0180006133.01 | 0.822209 | 2.677055e-53 | 2.226112e-50 |
MsG0180000111.01 | MsG0180006133.01 | 0.843390 | 1.443451e-58 | 2.255240e-55 |
MsG0180000718.01 | MsG0180006133.01 | 0.820048 | 8.425833e-53 | 6.595812e-50 |
MsG0180001293.01 | MsG0180006133.01 | 0.888264 | 6.889937e-73 | 5.299806e-69 |
MsG0180001588.01 | MsG0180006133.01 | 0.828447 | 8.943124e-55 | 8.891963e-52 |
MsG0180001719.01 | MsG0180006133.01 | 0.815815 | 7.618558e-52 | 5.307166e-49 |
MsG0180002211.01 | MsG0180006133.01 | 0.841535 | 4.480727e-58 | 6.603743e-55 |
MsG0180002218.01 | MsG0180006133.01 | 0.884030 | 2.714217e-71 | 1.762368e-67 |
MsG0180002397.01 | MsG0180006133.01 | 0.897095 | 1.958876e-76 | 2.179609e-72 |
MsG0180002429.01 | MsG0180006133.01 | 0.807966 | 3.903454e-50 | 2.204273e-47 |
MsG0180002583.01 | MsG0180006133.01 | 0.860994 | 1.400904e-63 | 3.903296e-60 |
MsG0180002936.01 | MsG0180006133.01 | 0.803236 | 3.838364e-49 | 1.918842e-46 |
MsG0180003421.01 | MsG0180006133.01 | 0.845819 | 3.201530e-59 | 5.402003e-56 |
MsG0180003427.01 | MsG0180006133.01 | 0.830220 | 3.320088e-55 | 3.476169e-52 |
MsG0180003485.01 | MsG0180006133.01 | 0.872077 | 4.195334e-67 | 1.731949e-63 |
MsG0180003658.01 | MsG0180006133.01 | 0.849806 | 2.551952e-60 | 4.896108e-57 |
MsG0180003698.01 | MsG0180006133.01 | 0.886439 | 3.416330e-72 | 2.440591e-68 |
MsG0180003796.01 | MsG0180006133.01 | 0.877608 | 5.483286e-69 | 2.773722e-65 |
MsG0180003857.01 | MsG0180006133.01 | 0.900054 | 1.075179e-77 | 1.366237e-73 |
MsG0180004120.01 | MsG0180006133.01 | 0.910490 | 1.767593e-82 | 3.618581e-78 |
MsG0180004126.01 | MsG0180006133.01 | 0.858343 | 8.795398e-63 | 2.237453e-59 |
MsG0180004185.01 | MsG0180006133.01 | 0.862595 | 4.535194e-64 | 1.335407e-60 |
MsG0180004299.01 | MsG0180006133.01 | 0.860708 | 1.711314e-63 | 4.721623e-60 |
MsG0180004471.01 | MsG0180006133.01 | 0.839943 | 1.170703e-57 | 1.642234e-54 |
MsG0180004475.01 | MsG0180006133.01 | 0.832178 | 1.096458e-55 | 1.216099e-52 |
MsG0180004538.01 | MsG0180006133.01 | 0.921275 | 4.409158e-88 | 1.562076e-83 |
MsG0180004583.01 | MsG0180006133.01 | 0.913071 | 9.403975e-84 | 2.184399e-79 |
MsG0180004661.01 | MsG0180006133.01 | 0.862545 | 4.698913e-64 | 1.381187e-60 |
MsG0180004806.01 | MsG0180006133.01 | 0.824308 | 8.661216e-54 | 7.642509e-51 |
MsG0180004835.01 | MsG0180006133.01 | 0.828561 | 8.393642e-55 | 8.373043e-52 |
MsG0180004972.01 | MsG0180006133.01 | 0.867142 | 1.701373e-65 | 5.877087e-62 |
MsG0180004994.01 | MsG0180006133.01 | 0.847218 | 1.329003e-59 | 2.345467e-56 |
MsG0180004995.01 | MsG0180006133.01 | 0.902556 | 8.590602e-79 | 1.223422e-74 |
MsG0180005002.01 | MsG0180006133.01 | 0.866137 | 3.553196e-65 | 1.184952e-61 |
MsG0180005048.01 | MsG0180006133.01 | 0.930293 | 2.021860e-93 | 1.186360e-88 |
MsG0180005435.01 | MsG0180006133.01 | 0.836357 | 9.810445e-57 | 1.233415e-53 |
MsG0180005553.01 | MsG0180006133.01 | 0.828037 | 1.122970e-54 | 1.103290e-51 |
MsG0180005655.01 | MsG0180006133.01 | 0.826142 | 3.191218e-54 | 2.967666e-51 |
MsG0180005835.01 | MsG0180006133.01 | 0.828797 | 7.363611e-55 | 7.395392e-52 |
MsG0180006006.01 | MsG0180006133.01 | 0.841255 | 5.307586e-58 | 7.753743e-55 |
MsG0180006062.01 | MsG0180006133.01 | 0.861667 | 8.733198e-64 | 2.489775e-60 |
MsG0180006133.01 | MsG0280006398.01 | 0.818357 | 2.045220e-52 | 1.527583e-49 |
MsG0180006133.01 | MsG0280006540.01 | 0.879156 | 1.568205e-69 | 8.411512e-66 |
MsG0180006133.01 | MsG0280006563.01 | 0.906888 | 9.161925e-81 | 1.584021e-76 |
MsG0180006133.01 | MsG0280006717.01 | 0.810850 | 9.389512e-51 | 5.722726e-48 |
MsG0180006133.01 | MsG0280007003.01 | 0.874494 | 6.463033e-68 | 2.915820e-64 |
MsG0180006133.01 | MsG0280007092.01 | 0.807714 | 4.417188e-50 | 2.478034e-47 |
MsG0180006133.01 | MsG0280007359.01 | 0.838600 | 2.611443e-57 | 3.515291e-54 |
MsG0180006133.01 | MsG0280007431.01 | 0.846965 | 1.559143e-59 | 2.729581e-56 |
MsG0180006133.01 | MsG0280007492.01 | 0.846456 | 2.147355e-59 | 3.698725e-56 |
MsG0180006133.01 | MsG0280007919.01 | 0.805296 | 1.429764e-49 | 7.536599e-47 |
MsG0180006133.01 | MsG0280009866.01 | 0.863625 | 2.178385e-64 | 6.647333e-61 |
MsG0180006133.01 | MsG0280010429.01 | 0.812087 | 5.058169e-51 | 3.185726e-48 |
MsG0180006133.01 | MsG0280010579.01 | 0.855916 | 4.576617e-62 | 1.073513e-58 |
MsG0180006133.01 | MsG0280011083.01 | 0.850745 | 1.392510e-60 | 2.755189e-57 |
MsG0180006133.01 | MsG0380011846.01 | 0.803751 | 3.001303e-49 | 1.520438e-46 |
MsG0180006133.01 | MsG0380012118.01 | 0.827788 | 1.288901e-54 | 1.256972e-51 |
MsG0180006133.01 | MsG0380012788.01 | 0.825894 | 3.655259e-54 | 3.375376e-51 |
MsG0180006133.01 | MsG0380012808.01 | 0.802607 | 5.178125e-49 | 2.547407e-46 |
MsG0180006133.01 | MsG0380012818.01 | 0.814710 | 1.341213e-51 | 9.065670e-49 |
MsG0180006133.01 | MsG0380012956.01 | 0.863631 | 2.168398e-64 | 6.618491e-61 |
MsG0180006133.01 | MsG0380013041.01 | 0.816772 | 4.655159e-52 | 3.328858e-49 |
MsG0180006133.01 | MsG0380013584.01 | 0.844088 | 9.389888e-59 | 1.499366e-55 |
MsG0180006133.01 | MsG0380014542.01 | 0.848371 | 6.396667e-60 | 1.171351e-56 |
MsG0180006133.01 | MsG0380014666.01 | 0.915793 | 3.855855e-85 | 1.025955e-80 |
MsG0180006133.01 | MsG0380014751.01 | 0.827096 | 1.889369e-54 | 1.805860e-51 |
MsG0180006133.01 | MsG0380014808.01 | 0.804105 | 2.534698e-49 | 1.295758e-46 |
MsG0180006133.01 | MsG0380015058.01 | 0.838930 | 2.146405e-57 | 2.918282e-54 |
MsG0180006133.01 | MsG0380015090.01 | 0.881136 | 3.083131e-70 | 1.785128e-66 |
MsG0180006133.01 | MsG0380015189.01 | 0.816165 | 6.364900e-52 | 4.476578e-49 |
MsG0180006133.01 | MsG0380015219.01 | 0.888034 | 8.442233e-73 | 6.432348e-69 |
MsG0180006133.01 | MsG0380015234.01 | 0.832904 | 7.241036e-56 | 8.206764e-53 |
MsG0180006133.01 | MsG0380015340.01 | 0.846846 | 1.680239e-59 | 2.930294e-56 |
MsG0180006133.01 | MsG0380015350.01 | 0.800032 | 1.743432e-48 | 8.034523e-46 |
MsG0180006133.01 | MsG0380015394.01 | 0.881024 | 3.383586e-70 | 1.950559e-66 |
MsG0180006133.01 | MsG0380015402.01 | 0.818981 | 1.475962e-52 | 1.121663e-49 |
MsG0180006133.01 | MsG0380015552.01 | 0.809245 | 2.081842e-50 | 1.216070e-47 |
MsG0180006133.01 | MsG0380015825.01 | 0.818056 | 2.392405e-52 | 1.771963e-49 |
MsG0180006133.01 | MsG0380015954.01 | 0.837614 | 4.684473e-57 | 6.118506e-54 |
MsG0180006133.01 | MsG0380016027.01 | 0.892596 | 1.372508e-74 | 1.263243e-70 |
MsG0180006133.01 | MsG0380016091.01 | 0.902624 | 8.012067e-79 | 1.144724e-74 |
MsG0180006133.01 | MsG0380016092.01 | 0.840117 | 1.054876e-57 | 1.487811e-54 |
MsG0180006133.01 | MsG0380016217.01 | 0.882940 | 6.829936e-71 | 4.243368e-67 |
MsG0180006133.01 | MsG0380016225.01 | 0.932901 | 4.241268e-95 | 2.920124e-90 |
MsG0180006133.01 | MsG0380017128.01 | 0.803896 | 2.801401e-49 | 1.424499e-46 |
MsG0180006133.01 | MsG0380017164.01 | 0.840553 | 8.114329e-58 | 1.159987e-54 |
MsG0180006133.01 | MsG0380017180.01 | 0.815483 | 9.034873e-52 | 6.237178e-49 |
MsG0180006133.01 | MsG0380017181.01 | 0.882910 | 7.005740e-71 | 4.347706e-67 |
MsG0180006133.01 | MsG0380017282.01 | 0.904851 | 7.962483e-80 | 1.254517e-75 |
MsG0180006133.01 | MsG0380017332.01 | 0.888663 | 4.833128e-73 | 3.778657e-69 |
MsG0180006133.01 | MsG0380017361.01 | 0.864674 | 1.026091e-64 | 3.248719e-61 |
MsG0180006133.01 | MsG0380017440.01 | 0.833598 | 4.865696e-56 | 5.630126e-53 |
MsG0180006133.01 | MsG0380017588.01 | 0.822257 | 2.609922e-53 | 2.173219e-50 |
MsG0180006133.01 | MsG0380017605.01 | 0.896870 | 2.435849e-76 | 2.684407e-72 |
MsG0180006133.01 | MsG0380017632.01 | 0.879300 | 1.394604e-69 | 7.522375e-66 |
MsG0180006133.01 | MsG0380017696.01 | 0.817684 | 2.902672e-52 | 2.128169e-49 |
MsG0180006133.01 | MsG0380017932.01 | 0.814217 | 1.723598e-51 | 1.149573e-48 |
MsG0180006133.01 | MsG0380018055.01 | 0.829933 | 3.900751e-55 | 4.050376e-52 |
MsG0180006133.01 | MsG0480018106.01 | 0.873038 | 2.003730e-67 | 8.569773e-64 |
MsG0180006133.01 | MsG0480018228.01 | 0.844190 | 8.815162e-59 | 1.412235e-55 |
MsG0180006133.01 | MsG0480018397.01 | 0.832475 | 9.255581e-56 | 1.035653e-52 |
MsG0180006133.01 | MsG0480018526.01 | 0.880717 | 4.360954e-70 | 2.485473e-66 |
MsG0180006133.01 | MsG0480018785.01 | 0.910029 | 2.956137e-82 | 5.920003e-78 |
MsG0180006133.01 | MsG0480020366.01 | 0.833820 | 4.281701e-56 | 4.988104e-53 |
MsG0180006133.01 | MsG0480020398.01 | 0.861977 | 7.017954e-64 | 2.022261e-60 |
MsG0180006133.01 | MsG0480020856.01 | 0.877397 | 6.493141e-69 | 3.260443e-65 |
MsG0180006133.01 | MsG0480020921.01 | 0.836001 | 1.208697e-56 | 1.503261e-53 |
MsG0180006133.01 | MsG0480020926.01 | 0.840685 | 7.492373e-58 | 1.075445e-54 |
MsG0180006133.01 | MsG0480020970.01 | 0.814842 | 1.254026e-51 | 8.506404e-49 |
MsG0180006133.01 | MsG0480020971.01 | 0.817661 | 2.937080e-52 | 2.152075e-49 |
MsG0180006133.01 | MsG0480021015.01 | 0.837559 | 4.840455e-57 | 6.311095e-54 |
MsG0180006133.01 | MsG0480021016.01 | 0.850329 | 1.822461e-60 | 3.557007e-57 |
MsG0180006133.01 | MsG0480021100.01 | 0.847655 | 1.008008e-59 | 1.804229e-56 |
MsG0180006133.01 | MsG0480021252.01 | 0.833701 | 4.585858e-56 | 5.322457e-53 |
MsG0180006133.01 | MsG0480021301.01 | 0.909234 | 7.131885e-82 | 1.373927e-77 |
MsG0180006133.01 | MsG0480021302.01 | 0.804157 | 2.472108e-49 | 1.265456e-46 |
MsG0180006133.01 | MsG0480021456.01 | 0.853447 | 2.375036e-61 | 5.133535e-58 |
MsG0180006133.01 | MsG0480021704.01 | 0.838692 | 2.473265e-57 | 3.338469e-54 |
MsG0180006133.01 | MsG0480021773.01 | 0.864735 | 9.821097e-65 | 3.116116e-61 |
MsG0180006133.01 | MsG0480021901.01 | 0.856704 | 2.686510e-62 | 6.467545e-59 |
MsG0180006133.01 | MsG0480021902.01 | 0.876970 | 9.139621e-69 | 4.518286e-65 |
MsG0180006133.01 | MsG0480022307.01 | 0.869009 | 4.268766e-66 | 1.576733e-62 |
MsG0180006133.01 | MsG0480022320.01 | 0.851348 | 9.407632e-61 | 1.898814e-57 |
MsG0180006133.01 | MsG0480022378.01 | 0.803027 | 4.239906e-49 | 2.108239e-46 |
MsG0180006133.01 | MsG0480022442.01 | 0.810460 | 1.139860e-50 | 6.874780e-48 |
MsG0180006133.01 | MsG0480022559.01 | 0.865464 | 5.793406e-65 | 1.886615e-61 |
MsG0180006133.01 | MsG0480022682.01 | 0.802592 | 5.215407e-49 | 2.564832e-46 |
MsG0180006133.01 | MsG0480022784.01 | 0.913103 | 9.061076e-84 | 2.107918e-79 |
MsG0180006133.01 | MsG0480022931.01 | 0.811270 | 7.615883e-51 | 4.693272e-48 |
MsG0180006133.01 | MsG0480022982.01 | 0.865325 | 6.407899e-65 | 2.076330e-61 |
MsG0180006133.01 | MsG0480022991.01 | 0.869082 | 4.042437e-66 | 1.497260e-62 |
MsG0180006133.01 | MsG0480022998.01 | 0.810581 | 1.073402e-50 | 6.495039e-48 |
MsG0180006133.01 | MsG0480023003.01 | 0.887031 | 2.038317e-72 | 1.491078e-68 |
MsG0180006133.01 | MsG0480023194.01 | 0.849466 | 3.176348e-60 | 6.026503e-57 |
MsG0180006133.01 | MsG0480023262.01 | 0.861319 | 1.114979e-63 | 3.142462e-60 |
MsG0180006133.01 | MsG0480023296.01 | 0.874972 | 4.444138e-68 | 2.040707e-64 |
MsG0180006133.01 | MsG0480023424.01 | 0.897082 | 1.984063e-76 | 2.206299e-72 |
MsG0180006133.01 | MsG0480023426.01 | 0.879891 | 8.603737e-70 | 4.746533e-66 |
MsG0180006133.01 | MsG0480023428.01 | 0.838173 | 3.364918e-57 | 4.470256e-54 |
MsG0180006133.01 | MsG0480023458.01 | 0.809380 | 1.946817e-50 | 1.141320e-47 |
MsG0180006133.01 | MsG0480023484.01 | 0.804188 | 2.435053e-49 | 1.247459e-46 |
MsG0180006133.01 | MsG0480023532.01 | 0.814471 | 1.514911e-51 | 1.017457e-48 |
MsG0180006133.01 | MsG0480023653.01 | 0.892213 | 1.952643e-74 | 1.768084e-70 |
MsG0180006133.01 | MsG0480023672.01 | 0.871619 | 5.954110e-67 | 2.417689e-63 |
MsG0180006133.01 | MsG0480023679.01 | 0.839490 | 1.535833e-57 | 2.124408e-54 |
MsG0180006133.01 | MsG0480023706.01 | 0.905399 | 4.472215e-80 | 7.220326e-76 |
MsG0180006133.01 | MsG0480023842.01 | 0.800476 | 1.415511e-48 | 6.597258e-46 |
MsG0180006133.01 | MsG0480024002.01 | 0.853201 | 2.794601e-61 | 5.990562e-58 |
MsG0180006133.01 | MsG0580024060.01 | 0.821123 | 4.773353e-53 | 3.849616e-50 |
MsG0180006133.01 | MsG0580024158.01 | 0.855476 | 6.150396e-62 | 1.421817e-58 |
MsG0180006133.01 | MsG0580024276.01 | 0.838861 | 2.235930e-57 | 3.033632e-54 |
MsG0180006133.01 | MsG0580024388.01 | 0.824199 | 9.187993e-54 | 8.082821e-51 |
MsG0180006133.01 | MsG0580024657.01 | 0.861480 | 9.959548e-64 | 2.822179e-60 |
MsG0180006133.01 | MsG0580024742.01 | 0.864716 | 9.950468e-65 | 3.155043e-61 |
MsG0180006133.01 | MsG0580024748.01 | 0.845640 | 3.579450e-59 | 6.004384e-56 |
MsG0180006133.01 | MsG0580024787.01 | 0.923413 | 2.744190e-89 | 1.096043e-84 |
MsG0180006133.01 | MsG0580024813.01 | 0.846639 | 1.913752e-59 | 3.315573e-56 |
MsG0180006133.01 | MsG0580024835.01 | 0.804511 | 2.085290e-49 | 1.077172e-46 |
MsG0180006133.01 | MsG0580024954.01 | 0.916997 | 9.072003e-86 | 2.560467e-81 |
MsG0180006133.01 | MsG0580025093.01 | 0.841438 | 4.752005e-58 | 6.982997e-55 |
MsG0180006133.01 | MsG0580025177.01 | 0.922706 | 6.931107e-89 | 2.662574e-84 |
MsG0180006133.01 | MsG0580025186.01 | 0.880140 | 7.014250e-70 | 3.907661e-66 |
MsG0180006133.01 | MsG0580025203.01 | 0.899396 | 2.066271e-77 | 2.550768e-73 |
MsG0180006133.01 | MsG0580025504.01 | 0.899052 | 2.902816e-77 | 3.527797e-73 |
MsG0180006133.01 | MsG0580025506.01 | 0.927442 | 1.167901e-91 | 5.832449e-87 |
MsG0180006133.01 | MsG0580025526.01 | 0.804424 | 2.175077e-49 | 1.121012e-46 |
MsG0180006133.01 | MsG0580025775.01 | 0.863851 | 1.853171e-64 | 5.699433e-61 |
MsG0180006133.01 | MsG0580026142.01 | 0.835481 | 1.636748e-56 | 2.004085e-53 |
MsG0180006133.01 | MsG0580028633.01 | 0.839375 | 1.645453e-57 | 2.268012e-54 |
MsG0180006133.01 | MsG0580028756.01 | 0.897781 | 1.007545e-76 | 1.156143e-72 |
MsG0180006133.01 | MsG0580028923.01 | 0.860424 | 2.086268e-63 | 5.700183e-60 |
MsG0180006133.01 | MsG0580028927.01 | 0.883005 | 6.466207e-71 | 4.027952e-67 |
MsG0180006133.01 | MsG0580028955.01 | 0.889937 | 1.547382e-73 | 1.274554e-69 |
MsG0180006133.01 | MsG0580029102.01 | 0.818172 | 2.251788e-52 | 1.673196e-49 |
MsG0180006133.01 | MsG0580029123.01 | 0.839609 | 1.430677e-57 | 1.986069e-54 |
MsG0180006133.01 | MsG0580029197.01 | 0.848110 | 7.553581e-60 | 1.371373e-56 |
MsG0180006133.01 | MsG0580029261.01 | 0.899741 | 1.468170e-77 | 1.839007e-73 |
MsG0180006133.01 | MsG0580029268.01 | 0.835105 | 2.036142e-56 | 2.464867e-53 |
MsG0180006133.01 | MsG0580029591.01 | 0.929827 | 3.968171e-93 | 2.264477e-88 |
MsG0180006133.01 | MsG0680030383.01 | 0.820517 | 6.578590e-53 | 5.216400e-50 |
MsG0180006133.01 | MsG0680031616.01 | 0.848589 | 5.567850e-60 | 1.026762e-56 |
MsG0180006133.01 | MsG0680031701.01 | 0.849207 | 3.750703e-60 | 7.058687e-57 |
MsG0180006133.01 | MsG0680032772.01 | 0.813805 | 2.125208e-51 | 1.401750e-48 |
MsG0180006133.01 | MsG0680032773.01 | 0.827254 | 1.731653e-54 | 1.662884e-51 |
MsG0180006133.01 | MsG0680033696.01 | 0.834251 | 3.338675e-56 | 3.940088e-53 |
MsG0180006133.01 | MsG0680034651.01 | 0.824387 | 8.298132e-54 | 7.339010e-51 |
MsG0180006133.01 | MsG0680034764.01 | 0.811067 | 8.427236e-51 | 5.165743e-48 |
MsG0180006133.01 | MsG0680035350.01 | 0.873206 | 1.759161e-67 | 7.571164e-64 |
MsG0180006133.01 | MsG0680035776.01 | 0.900466 | 7.125193e-78 | 9.228414e-74 |
MsG0180006133.01 | MsG0680035792.01 | 0.872002 | 4.443414e-67 | 1.828876e-63 |
MsG0180006133.01 | MsG0680035878.01 | 0.857963 | 1.140369e-62 | 2.864617e-59 |
MsG0180006133.01 | MsG0780036534.01 | 0.871929 | 4.699045e-67 | 1.929152e-63 |
MsG0180006133.01 | MsG0780037158.01 | 0.820560 | 6.430659e-53 | 5.105394e-50 |
MsG0180006133.01 | MsG0780037741.01 | 0.860598 | 1.847599e-63 | 5.078350e-60 |
MsG0180006133.01 | MsG0780038393.01 | 0.838476 | 2.810785e-57 | 3.769201e-54 |
MsG0180006133.01 | MsG0780038402.01 | 0.852694 | 3.903199e-61 | 8.223501e-58 |
MsG0180006133.01 | MsG0780038445.01 | 0.828069 | 1.103263e-54 | 1.084915e-51 |
MsG0180006133.01 | MsG0780038642.01 | 0.820710 | 5.940631e-53 | 4.736005e-50 |
MsG0180006133.01 | MsG0780038736.01 | 0.878683 | 2.303164e-69 | 1.213885e-65 |
MsG0180006133.01 | MsG0780039303.01 | 0.809174 | 2.155913e-50 | 1.256935e-47 |
MsG0180006133.01 | MsG0780039578.01 | 0.847136 | 1.399708e-59 | 2.464205e-56 |
MsG0180006133.01 | MsG0780039861.01 | 0.906274 | 1.766842e-80 | 2.970050e-76 |
MsG0180006133.01 | MsG0780040364.01 | 0.890839 | 6.849389e-74 | 5.856742e-70 |
MsG0180006133.01 | MsG0780040474.01 | 0.800234 | 1.585818e-48 | 7.345806e-46 |
MsG0180006133.01 | MsG0780040533.01 | 0.851728 | 7.346229e-61 | 1.500895e-57 |
MsG0180006133.01 | MsG0780040620.01 | 0.929024 | 1.257154e-92 | 6.856379e-88 |
MsG0180006133.01 | MsG0780040641.01 | 0.901377 | 2.850132e-78 | 3.839108e-74 |
MsG0180006133.01 | MsG0780040899.01 | 0.840462 | 8.569021e-58 | 1.221521e-54 |
MsG0180006133.01 | MsG0780041008.01 | 0.862775 | 3.990692e-64 | 1.182663e-60 |
MsG0180006133.01 | MsG0780041063.01 | 0.826755 | 2.279788e-54 | 2.157441e-51 |
MsG0180006133.01 | MsG0780041132.01 | 0.850038 | 2.198942e-60 | 4.251638e-57 |
MsG0180006133.01 | MsG0780041141.01 | 0.835458 | 1.658179e-56 | 2.028908e-53 |
MsG0180006133.01 | MsG0780041142.01 | 0.850102 | 2.110125e-60 | 4.088120e-57 |
MsG0180006133.01 | MsG0780041143.01 | 0.901256 | 3.219612e-78 | 4.314059e-74 |
MsG0180006133.01 | MsG0780041271.01 | 0.803300 | 3.722625e-49 | 1.864023e-46 |
MsG0180006133.01 | MsG0780041273.01 | 0.892890 | 1.045086e-74 | 9.734042e-71 |
MsG0180006133.01 | MsG0780041340.01 | 0.872430 | 3.198853e-67 | 1.338397e-63 |
MsG0180006133.01 | MsG0780041359.01 | 0.912107 | 2.842513e-83 | 6.285719e-79 |
MsG0180006133.01 | MsG0780041546.01 | 0.831233 | 1.874857e-55 | 2.022112e-52 |
MsG0180006133.01 | MsG0780041660.01 | 0.800844 | 1.191052e-48 | 5.603407e-46 |
MsG0180006133.01 | MsG0880041837.01 | 0.820977 | 5.156978e-53 | 4.142461e-50 |
MsG0180006133.01 | MsG0880041930.01 | 0.836421 | 9.449000e-57 | 1.190196e-53 |
MsG0180006133.01 | MsG0880042906.01 | 0.824859 | 6.424955e-54 | 5.760731e-51 |
MsG0180006133.01 | MsG0880043637.01 | 0.850467 | 1.666715e-60 | 3.267795e-57 |
MsG0180006133.01 | MsG0880043684.01 | 0.837898 | 3.960708e-57 | 5.218123e-54 |
MsG0180006133.01 | MsG0880043714.01 | 0.846687 | 1.856913e-59 | 3.222250e-56 |
MsG0180006133.01 | MsG0880043752.01 | 0.866897 | 2.036906e-65 | 6.977835e-62 |
MsG0180006133.01 | MsG0880044103.01 | 0.833937 | 4.001428e-56 | 4.678223e-53 |
MsG0180006133.01 | MsG0880044437.01 | 0.832102 | 1.144540e-55 | 1.266564e-52 |
MsG0180006133.01 | MsG0880044835.01 | 0.817150 | 3.828104e-52 | 2.765939e-49 |
MsG0180006133.01 | MsG0880044989.01 | 0.830646 | 2.611874e-55 | 2.768693e-52 |
MsG0180006133.01 | MsG0880045015.01 | 0.900459 | 7.172313e-78 | 9.285551e-74 |
MsG0180006133.01 | MsG0880045439.01 | 0.834395 | 3.071870e-56 | 3.640890e-53 |
MsG0180006133.01 | MsG0880045584.01 | 0.845210 | 4.682002e-59 | 7.745583e-56 |
MsG0180006133.01 | MsG0880045612.01 | 0.908591 | 1.446564e-81 | 2.701687e-77 |
MsG0180006133.01 | MsG0880045647.01 | 0.886150 | 4.393067e-72 | 3.101629e-68 |
MsG0180006133.01 | MsG0880045890.01 | 0.805056 | 1.604925e-49 | 8.408095e-47 |
MsG0180006133.01 | MsG0880045989.01 | 0.832439 | 9.447714e-56 | 1.056025e-52 |
MsG0180006133.01 | MsG0880046208.01 | 0.809827 | 1.561120e-50 | 9.260768e-48 |
MsG0180006133.01 | MsG0880046431.01 | 0.861118 | 1.284602e-63 | 3.594805e-60 |
MsG0180006133.01 | MsG0880046529.01 | 0.830461 | 2.898241e-55 | 3.055270e-52 |
MsG0180006133.01 | MsG0880046646.01 | 0.868196 | 7.813864e-66 | 2.802099e-62 |
MsG0180006133.01 | MsG0880046859.01 | 0.823242 | 1.539027e-53 | 1.317835e-50 |
MsG0180006133.01 | MsG0880046885.01 | 0.841941 | 3.499918e-58 | 5.224073e-55 |
MsG0180006133.01 | MsG0880046904.01 | 0.903486 | 3.302535e-79 | 4.899622e-75 |
MsG0180006133.01 | MsG0880046905.01 | 0.909826 | 3.706634e-82 | 7.348494e-78 |
MsG0180006133.01 | MsG0880046906.01 | 0.861754 | 8.215208e-64 | 2.348986e-60 |
MsG0180006133.01 | MsG0880046991.01 | 0.833932 | 4.013528e-56 | 4.691650e-53 |
MsG0180006133.01 | MsG0880046993.01 | 0.848530 | 5.778854e-60 | 1.063734e-56 |
MsG0180006133.01 | MsG0880047059.01 | 0.810643 | 1.040937e-50 | 6.309030e-48 |
MsG0180006133.01 | MsG0880047223.01 | 0.813124 | 3.000314e-51 | 1.942484e-48 |
MsG0180006133.01 | MsG0880047345.01 | 0.802144 | 6.450298e-49 | 3.136026e-46 |
MsG0180006133.01 | MsG0880047447.01 | 0.814928 | 1.199900e-51 | 8.157969e-49 |
MsG0180006133.01 | MsG0880047466.01 | 0.808223 | 3.441062e-50 | 1.956517e-47 |
MsG0180006133.01 | MsG0880047640.01 | 0.854156 | 1.485294e-61 | 3.286947e-58 |
MsG0180006133.01 | MsG0880047649.01 | 0.914347 | 2.133301e-84 | 5.276996e-80 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006133.01.T01 | MTR_1g115220 | 88.837 | 215 | 15 | 1 | 2 | 216 | 5 | 210 | 9.90e-124 | 349 |
MsG0180006133.01.T01 | MTR_8g018100 | 72.951 | 122 | 15 | 1 | 19 | 140 | 144 | 247 | 3.03e-50 | 164 |
MsG0180006133.01.T01 | MTR_3g115580 | 62.338 | 77 | 29 | 0 | 86 | 162 | 32 | 108 | 1.70e-25 | 97.4 |
MsG0180006133.01.T01 | MTR_5g024180 | 45.745 | 94 | 47 | 1 | 83 | 172 | 16 | 109 | 1.24e-21 | 87.0 |
MsG0180006133.01.T01 | MTR_7g068280 | 56.164 | 73 | 32 | 0 | 95 | 167 | 47 | 119 | 1.49e-21 | 87.8 |
MsG0180006133.01.T01 | MTR_8g073345 | 41.322 | 121 | 51 | 2 | 83 | 198 | 16 | 121 | 6.78e-21 | 84.7 |
MsG0180006133.01.T01 | MTR_8g073345 | 41.322 | 121 | 51 | 2 | 83 | 198 | 16 | 121 | 7.69e-21 | 85.1 |
MsG0180006133.01.T01 | MTR_4g094622 | 50.000 | 74 | 37 | 0 | 89 | 162 | 54 | 127 | 2.58e-18 | 78.6 |
MsG0180006133.01.T01 | MTR_7g082820 | 51.515 | 66 | 31 | 1 | 95 | 160 | 9 | 73 | 2.79e-15 | 70.5 |
MsG0180006133.01.T01 | MTR_0191s0020 | 27.429 | 175 | 91 | 6 | 2 | 176 | 7 | 145 | 4.28e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006133.01.T01 | AT5G23420 | 54.217 | 166 | 66 | 5 | 4 | 162 | 15 | 177 | 3.28e-43 | 145 |
MsG0180006133.01.T01 | AT4G35570 | 57.746 | 71 | 30 | 0 | 90 | 160 | 25 | 95 | 5.43e-24 | 92.8 |
MsG0180006133.01.T01 | AT4G35570 | 57.746 | 71 | 30 | 0 | 90 | 160 | 25 | 95 | 5.43e-24 | 92.8 |
MsG0180006133.01.T01 | AT2G17560 | 56.944 | 72 | 30 | 1 | 90 | 160 | 25 | 96 | 2.75e-22 | 88.6 |
MsG0180006133.01.T01 | AT2G17560 | 56.944 | 72 | 30 | 1 | 90 | 160 | 25 | 96 | 3.12e-22 | 88.6 |
MsG0180006133.01.T01 | AT2G17560 | 56.944 | 72 | 30 | 1 | 90 | 160 | 25 | 96 | 3.12e-22 | 88.6 |
MsG0180006133.01.T01 | AT1G20693 | 54.545 | 77 | 34 | 1 | 87 | 162 | 25 | 101 | 6.77e-22 | 87.8 |
MsG0180006133.01.T01 | AT1G20693 | 54.545 | 77 | 34 | 1 | 87 | 162 | 25 | 101 | 7.41e-22 | 87.8 |
MsG0180006133.01.T01 | AT1G20693 | 54.545 | 77 | 34 | 1 | 87 | 162 | 25 | 101 | 7.60e-22 | 87.8 |
MsG0180006133.01.T01 | AT3G51880 | 41.129 | 124 | 58 | 2 | 94 | 216 | 48 | 157 | 3.75e-21 | 87.0 |
MsG0180006133.01.T01 | AT1G20696 | 53.750 | 80 | 36 | 1 | 83 | 162 | 20 | 98 | 1.95e-20 | 84.0 |
MsG0180006133.01.T01 | AT1G20696 | 55.263 | 76 | 33 | 1 | 85 | 160 | 22 | 96 | 2.90e-20 | 83.6 |
MsG0180006133.01.T01 | AT1G20696 | 53.750 | 80 | 36 | 1 | 83 | 162 | 20 | 98 | 2.98e-20 | 83.2 |
MsG0180006133.01.T01 | AT3G51880 | 40.351 | 114 | 54 | 1 | 94 | 207 | 48 | 147 | 8.13e-20 | 83.2 |
MsG0180006133.01.T01 | AT3G51880 | 40.351 | 114 | 54 | 1 | 94 | 207 | 48 | 147 | 8.13e-20 | 83.2 |
MsG0180006133.01.T01 | AT3G51880 | 40.351 | 114 | 54 | 1 | 94 | 207 | 48 | 147 | 8.13e-20 | 83.2 |
MsG0180006133.01.T01 | AT3G51880 | 55.224 | 67 | 30 | 0 | 94 | 160 | 48 | 114 | 9.90e-20 | 82.8 |
MsG0180006133.01.T01 | AT5G23420 | 61.667 | 60 | 22 | 1 | 4 | 62 | 15 | 74 | 5.48e-18 | 78.2 |
MsG0180006133.01.T01 | AT2G34450 | 50.000 | 64 | 32 | 0 | 99 | 162 | 63 | 126 | 5.62e-17 | 75.1 |
MsG0180006133.01.T01 | AT2G34450 | 50.000 | 64 | 32 | 0 | 99 | 162 | 63 | 126 | 5.62e-17 | 75.1 |
MsG0180006133.01.T01 | AT2G34450 | 50.000 | 64 | 32 | 0 | 99 | 162 | 63 | 126 | 5.62e-17 | 75.1 |
MsG0180006133.01.T01 | AT2G34450 | 50.769 | 65 | 31 | 1 | 99 | 162 | 63 | 127 | 2.50e-15 | 70.9 |
Find 63 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGAAGAAGATTAAGAAATT+AGG | 0.167332 | 1:+100542821 | MsG0180006133.01.T01:five_prime_UTR |
TTAGGAGAAGAAGCCTTATT+TGG | 0.238707 | 1:+100543880 | MsG0180006133.01.T01:intron |
CTCTTAACATCCTTTGAATC+AGG | 0.239936 | 1:-100543608 | None:intergenic |
TCAACAACCTTATCCAAATA+AGG | 0.266781 | 1:-100543893 | None:intergenic |
CAAAAGAACCAAATGCAAAA+AGG | 0.273542 | 1:+100543388 | MsG0180006133.01.T01:CDS |
AGCGAAAGCACTGCCATCTT+TGG | 0.274022 | 1:-100542929 | None:intergenic |
ATGGCAGTGCTTTCGCTAAA+TGG | 0.280098 | 1:+100542935 | MsG0180006133.01.T01:CDS |
AGAAGAAGATTAAGAAATTA+GGG | 0.289079 | 1:+100542822 | MsG0180006133.01.T01:five_prime_UTR |
AACATGTCTTAGTTATGTTT+AGG | 0.310224 | 1:+100544340 | MsG0180006133.01.T01:three_prime_UTR |
TAGTCTAAAGTTGTATAGTT+TGG | 0.321772 | 1:+100544317 | MsG0180006133.01.T01:three_prime_UTR |
GAAGAGTAGTGGTGACATTT+TGG | 0.329578 | 1:+100544252 | MsG0180006133.01.T01:exon |
ACATGTCTTAGTTATGTTTA+GGG | 0.338284 | 1:+100544341 | MsG0180006133.01.T01:three_prime_UTR |
TAAAGTTGGGAAAGGGAAAA+AGG | 0.356731 | 1:+100543413 | MsG0180006133.01.T01:CDS |
TCTTAATCTTCTTCTTCAAA+TGG | 0.374039 | 1:-100542814 | None:intergenic |
GGTGGACGCTTCGGCGCATT+AGG | 0.374547 | 1:-100543444 | None:intergenic |
GAAGAAGCCTTATTTGGATA+AGG | 0.386677 | 1:+100543886 | MsG0180006133.01.T01:CDS |
CTAGCAGAAAATAATGTAAC+TGG | 0.393604 | 1:-100544437 | None:intergenic |
TGCTGCTGCAGGAGAGGTGG+AGG | 0.407036 | 1:+100544218 | MsG0180006133.01.T01:CDS |
GAATACATGATCACAAGATA+TGG | 0.422310 | 1:-100544480 | None:intergenic |
GTTACGAAATGGCAACGAAA+AGG | 0.426485 | 1:+100542863 | MsG0180006133.01.T01:exon |
AGAAATTAGGGTTAAATCAA+AGG | 0.430186 | 1:+100542834 | MsG0180006133.01.T01:five_prime_UTR |
GAAATTAGGGTTAAATCAAA+GGG | 0.433589 | 1:+100542835 | MsG0180006133.01.T01:five_prime_UTR |
TTACGAAATGGCAACGAAAA+GGG | 0.447058 | 1:+100542864 | MsG0180006133.01.T01:exon |
AGCTGCTGCTGCAGGAGAGG+TGG | 0.448405 | 1:+100544215 | MsG0180006133.01.T01:CDS |
AAAGCAGTTGGTGGACGCTT+CGG | 0.448751 | 1:-100543453 | None:intergenic |
GACAAGGAAGCTGCTGCTGC+AGG | 0.462916 | 1:+100544207 | MsG0180006133.01.T01:CDS |
CTGATTCAAAGGATGTTAAG+AGG | 0.466487 | 1:+100543609 | MsG0180006133.01.T01:CDS |
AAAGGGAACACGTTACGAAA+TGG | 0.466859 | 1:+100542852 | MsG0180006133.01.T01:exon |
TGCATGTCAATGAGTGCAAC+AGG | 0.479421 | 1:-100543060 | None:intergenic |
GGGTTCTGATAAGGAAGATA+AGG | 0.479785 | 1:+100544170 | MsG0180006133.01.T01:CDS |
AACTATACAACTTTAGACTA+AGG | 0.481139 | 1:-100544314 | None:intergenic |
AACTGAAGGCAGAATATAGA+AGG | 0.492342 | 1:+100543915 | MsG0180006133.01.T01:CDS |
AAATAGGTTGGTAAGGAAGC+TGG | 0.492839 | 1:+100543724 | MsG0180006133.01.T01:intron |
GGATCAAGAGGGTTCTGATA+AGG | 0.494850 | 1:+100544161 | MsG0180006133.01.T01:intron |
GCCAAAATCAAAATGAATCT+CGG | 0.501868 | 1:+100543099 | MsG0180006133.01.T01:CDS |
GTTCTCGTTCGTGCCAAAGA+TGG | 0.507354 | 1:+100542916 | MsG0180006133.01.T01:CDS |
GTAAGGAAGCTGGTGAGAAG+TGG | 0.524391 | 1:+100543734 | MsG0180006133.01.T01:CDS |
CAGCTTCCTTGTCATCAGAC+TGG | 0.532712 | 1:-100544197 | None:intergenic |
TCTTAACATCCTTTGAATCA+GGG | 0.535919 | 1:-100543607 | None:intergenic |
GGATAAGGTTGTTGAACTGA+AGG | 0.538046 | 1:+100543901 | MsG0180006133.01.T01:CDS |
GAAGTGGAGGTCTCTGACTG+AGG | 0.540601 | 1:+100543750 | MsG0180006133.01.T01:CDS |
GGAAGCTAACCCTGATTCAA+AGG | 0.545294 | 1:+100543598 | MsG0180006133.01.T01:CDS |
ATGAAAACAAAGAAAGCAGT+TGG | 0.548460 | 1:-100543465 | None:intergenic |
GGAAGCTGCTGCTGCAGGAG+AGG | 0.549573 | 1:+100544212 | MsG0180006133.01.T01:CDS |
AAAACAAAGAAAGCAGTTGG+TGG | 0.566440 | 1:-100543462 | None:intergenic |
AGGCAGAATATAGAAGGCCA+TGG | 0.568651 | 1:+100543921 | MsG0180006133.01.T01:CDS |
AGTTAACTGATGAAGAGTAG+TGG | 0.571245 | 1:+100544241 | MsG0180006133.01.T01:CDS |
AAAAGGGCTAAAGTTGGGAA+AGG | 0.581404 | 1:+100543405 | MsG0180006133.01.T01:CDS |
AGCAGCATTATACAATTCCA+TGG | 0.595262 | 1:-100543938 | None:intergenic |
AGGAAGCTGGTGAGAAGTGG+AGG | 0.606568 | 1:+100543737 | MsG0180006133.01.T01:CDS |
TGATTCAAAGGATGTTAAGA+GGG | 0.616338 | 1:+100543610 | MsG0180006133.01.T01:CDS |
AAAGGGCTAAAGTTGGGAAA+GGG | 0.618574 | 1:+100543406 | MsG0180006133.01.T01:CDS |
GCTGTATGTATAGGATCAAG+AGG | 0.620076 | 1:+100544149 | MsG0180006133.01.T01:intron |
AAACAAAATTAGAAGCCCAA+AGG | 0.629908 | 1:-100543985 | None:intergenic |
TGAAGCGGAACGAGAATCGA+CGG | 0.630596 | 1:-100542893 | None:intergenic |
ACATGATCACAAGATATGGA+AGG | 0.633260 | 1:-100544476 | None:intergenic |
GGCACGAACGAGAACTGAAG+CGG | 0.641201 | 1:-100542908 | None:intergenic |
GGCATTAACAATATTCCAAG+AGG | 0.642814 | 1:-100544416 | None:intergenic |
GGAAGGCCAGTCTGATGACA+AGG | 0.644830 | 1:+100544191 | MsG0180006133.01.T01:CDS |
TCTGATAAGGAAGATAAGGA+AGG | 0.664708 | 1:+100544174 | MsG0180006133.01.T01:CDS |
ACAACTTTAGACTAAGGCAA+TGG | 0.670597 | 1:-100544308 | None:intergenic |
CTGTATGTATAGGATCAAGA+GGG | 0.690024 | 1:+100544150 | MsG0180006133.01.T01:intron |
CTGAAGTGAAGAAACCCGAG+AGG | 0.719762 | 1:+100543255 | MsG0180006133.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAATTAGTACTAATTA+GGG | - | Chr1:100543148-100543167 | None:intergenic | 10.0% |
!!! | GTATTTGATTTTATTTAATT+TGG | + | Chr1:100543200-100543219 | MsG0180006133.01.T01:intron | 10.0% |
!!! | TTTATTTTTTGAAATATTGT+AGG | + | Chr1:100543352-100543371 | MsG0180006133.01.T01:intron | 10.0% |
!! | AAAAAATCACAAACTAAAAT+TGG | - | Chr1:100543294-100543313 | None:intergenic | 15.0% |
!! | AAAAATCACAAACTAAAATT+GGG | - | Chr1:100543293-100543312 | None:intergenic | 15.0% |
!! | GATAATAATTAGTACTAATT+AGG | - | Chr1:100543149-100543168 | None:intergenic | 15.0% |
!! | TTACTTATATTGTGAAAAAT+AGG | + | Chr1:100543708-100543727 | MsG0180006133.01.T01:intron | 15.0% |
!! | AAAATCACAAACTAAAATTG+GGG | - | Chr1:100543292-100543311 | None:intergenic | 20.0% |
!! | AAGAAGAAGATTAAGAAATT+AGG | + | Chr1:100542821-100542840 | MsG0180006133.01.T01:five_prime_UTR | 20.0% |
!! | AGAAGAAGATTAAGAAATTA+GGG | + | Chr1:100542822-100542841 | MsG0180006133.01.T01:five_prime_UTR | 20.0% |
!! | TGATATGGTTAAAATTGTTT+AGG | + | Chr1:100543862-100543881 | MsG0180006133.01.T01:intron | 20.0% |
!! | TTATATTGTGAAAAATAGGT+TGG | + | Chr1:100543712-100543731 | MsG0180006133.01.T01:intron | 20.0% |
!!! | TCTGGTTTTTATTAGTATTT+AGG | + | Chr1:100543317-100543336 | MsG0180006133.01.T01:intron | 20.0% |
!!! | TGAGTTTAGAAAGATTTTTA+AGG | + | Chr1:100543577-100543596 | MsG0180006133.01.T01:CDS | 20.0% |
!!! | TGTTTTGATTTGTTTTGATT+TGG | + | Chr1:100543801-100543820 | MsG0180006133.01.T01:intron | 20.0% |
!!! | TTTTCACAATATAAGTAACA+TGG | - | Chr1:100543706-100543725 | None:intergenic | 20.0% |
! | AAAAGAACCAAATGCAAAAA+GGG | + | Chr1:100543389-100543408 | MsG0180006133.01.T01:CDS | 25.0% |
! | AAATCACAAACTAAAATTGG+GGG | - | Chr1:100543291-100543310 | None:intergenic | 25.0% |
! | AACATGTCTTAGTTATGTTT+AGG | + | Chr1:100544340-100544359 | MsG0180006133.01.T01:three_prime_UTR | 25.0% |
! | AACTATACAACTTTAGACTA+AGG | - | Chr1:100544317-100544336 | None:intergenic | 25.0% |
! | ACATGTCTTAGTTATGTTTA+GGG | + | Chr1:100544341-100544360 | MsG0180006133.01.T01:three_prime_UTR | 25.0% |
! | AGAAATTAGGGTTAAATCAA+AGG | + | Chr1:100542834-100542853 | MsG0180006133.01.T01:five_prime_UTR | 25.0% |
! | GAAATTAGGGTTAAATCAAA+GGG | + | Chr1:100542835-100542854 | MsG0180006133.01.T01:five_prime_UTR | 25.0% |
! | GCTGATATAATGTTATGATA+TGG | + | Chr1:100543847-100543866 | MsG0180006133.01.T01:intron | 25.0% |
! | TCTTAATCTTCTTCTTCAAA+TGG | - | Chr1:100542817-100542836 | None:intergenic | 25.0% |
! | TGTTTGATTAAGTTATCCAA+GGG | + | Chr1:100543669-100543688 | MsG0180006133.01.T01:intron | 25.0% |
! | TTGTTTGATTAAGTTATCCA+AGG | + | Chr1:100543668-100543687 | MsG0180006133.01.T01:intron | 25.0% |
!! | GAAAAAGAGTATATACGAAA+TGG | - | Chr1:100542986-100543005 | None:intergenic | 25.0% |
!! | TAGTCTAAAGTTGTATAGTT+TGG | + | Chr1:100544317-100544336 | MsG0180006133.01.T01:three_prime_UTR | 25.0% |
!! | TGTTCTGTTTTGTAATGTTT+TGG | + | Chr1:100543506-100543525 | MsG0180006133.01.T01:intron | 25.0% |
!!! | AGTGAAGCATGTTTTATTTT+GGG | + | Chr1:100544067-100544086 | MsG0180006133.01.T01:intron | 25.0% |
!!! | CTTTCTTTGTTTTCATGTAA+GGG | + | Chr1:100543472-100543491 | MsG0180006133.01.T01:intron | 25.0% |
AAACAAAATTAGAAGCCCAA+AGG | - | Chr1:100543988-100544007 | None:intergenic | 30.0% | |
ATGAAAACAAAGAAAGCAGT+TGG | - | Chr1:100543468-100543487 | None:intergenic | 30.0% | |
CAAAAGAACCAAATGCAAAA+AGG | + | Chr1:100543388-100543407 | MsG0180006133.01.T01:CDS | 30.0% | |
CTAGCAGAAAATAATGTAAC+TGG | - | Chr1:100544440-100544459 | None:intergenic | 30.0% | |
GCCAAAATCAAAATGAATCT+CGG | + | Chr1:100543099-100543118 | MsG0180006133.01.T01:CDS | 30.0% | |
TCAACAACCTTATCCAAATA+AGG | - | Chr1:100543896-100543915 | None:intergenic | 30.0% | |
TCTTAACATCCTTTGAATCA+GGG | - | Chr1:100543610-100543629 | None:intergenic | 30.0% | |
TGATTCAAAGGATGTTAAGA+GGG | + | Chr1:100543610-100543629 | MsG0180006133.01.T01:CDS | 30.0% | |
TTTGCTTTCTTTACTTAAGC+TGG | + | Chr1:100544028-100544047 | MsG0180006133.01.T01:intron | 30.0% | |
! | AAGTGAAGTATGTTTTCCTT+TGG | + | Chr1:100543969-100543988 | MsG0180006133.01.T01:CDS | 30.0% |
! | AGTGAAGTATGTTTTCCTTT+GGG | + | Chr1:100543970-100543989 | MsG0180006133.01.T01:CDS | 30.0% |
!! | GATTGGTTTGATTTGTTTCA+GGG | + | Chr1:100543553-100543572 | MsG0180006133.01.T01:intron | 30.0% |
!! | TGATTGGTTTGATTTGTTTC+AGG | + | Chr1:100543552-100543571 | MsG0180006133.01.T01:intron | 30.0% |
!! | TTGTGAAAAATAGGTTGGTA+AGG | + | Chr1:100543717-100543736 | MsG0180006133.01.T01:intron | 30.0% |
!! | TTTGTTTTCATGTAAGGGTT+TGG | + | Chr1:100543477-100543496 | MsG0180006133.01.T01:intron | 30.0% |
!!! | ACCGAGATTCATTTTGATTT+TGG | - | Chr1:100543103-100543122 | None:intergenic | 30.0% |
!!! | AGTTTGTGATTTTTTGACTC+TGG | + | Chr1:100543299-100543318 | MsG0180006133.01.T01:intron | 30.0% |
!!! | GAGTGAAGCATGTTTTATTT+TGG | + | Chr1:100544066-100544085 | MsG0180006133.01.T01:intron | 30.0% |
!!! | GCATTTGGTTCTTTTGAATT+TGG | - | Chr1:100543384-100543403 | None:intergenic | 30.0% |
!!! | GCTTTCTTTGTTTTCATGTA+AGG | + | Chr1:100543471-100543490 | MsG0180006133.01.T01:intron | 30.0% |
!!! | GTTTTGGTTCTATAGTTTGA+GGG | + | Chr1:100543522-100543541 | MsG0180006133.01.T01:intron | 30.0% |
!!! | TCATTTTGATTTTGGCTTCA+AGG | - | Chr1:100543095-100543114 | None:intergenic | 30.0% |
!!! | TGTTTTGGTTCTATAGTTTG+AGG | + | Chr1:100543521-100543540 | MsG0180006133.01.T01:intron | 30.0% |
!!! | TTTTGGTTCTATAGTTTGAG+GGG | + | Chr1:100543523-100543542 | MsG0180006133.01.T01:intron | 30.0% |
AAAACAAAGAAAGCAGTTGG+TGG | - | Chr1:100543465-100543484 | None:intergenic | 35.0% | |
AACTGAAGGCAGAATATAGA+AGG | + | Chr1:100543915-100543934 | MsG0180006133.01.T01:CDS | 35.0% | |
AATGCAAAAAGGGCTAAAGT+TGG | + | Chr1:100543399-100543418 | MsG0180006133.01.T01:CDS | 35.0% | |
ACAACTTTAGACTAAGGCAA+TGG | - | Chr1:100544311-100544330 | None:intergenic | 35.0% | |
AGCAGCATTATACAATTCCA+TGG | - | Chr1:100543941-100543960 | None:intergenic | 35.0% | |
AGTTAACTGATGAAGAGTAG+TGG | + | Chr1:100544241-100544260 | MsG0180006133.01.T01:CDS | 35.0% | |
ATGCAAAAAGGGCTAAAGTT+GGG | + | Chr1:100543400-100543419 | MsG0180006133.01.T01:CDS | 35.0% | |
CATGGTCAATAATAAACCCT+TGG | - | Chr1:100543688-100543707 | None:intergenic | 35.0% | |
CTCTTAACATCCTTTGAATC+AGG | - | Chr1:100543611-100543630 | None:intergenic | 35.0% | |
CTGATTCAAAGGATGTTAAG+AGG | + | Chr1:100543609-100543628 | MsG0180006133.01.T01:CDS | 35.0% | |
CTGTATGTATAGGATCAAGA+GGG | + | Chr1:100544150-100544169 | MsG0180006133.01.T01:intron | 35.0% | |
GGCATTAACAATATTCCAAG+AGG | - | Chr1:100544419-100544438 | None:intergenic | 35.0% | |
TAAAGTTGGGAAAGGGAAAA+AGG | + | Chr1:100543413-100543432 | MsG0180006133.01.T01:CDS | 35.0% | |
TCTGATAAGGAAGATAAGGA+AGG | + | Chr1:100544174-100544193 | MsG0180006133.01.T01:CDS | 35.0% | |
TTACGAAATGGCAACGAAAA+GGG | + | Chr1:100542864-100542883 | MsG0180006133.01.T01:exon | 35.0% | |
TTTGCTCTCTTTACTTAAGC+TGG | + | Chr1:100544125-100544144 | MsG0180006133.01.T01:intron | 35.0% | |
! | ACTTTAGCCCTTTTTGCATT+TGG | - | Chr1:100543399-100543418 | None:intergenic | 35.0% |
! | ATCTTTTTGCATTGTCCTCT+TGG | + | Chr1:100544401-100544420 | MsG0180006133.01.T01:three_prime_UTR | 35.0% |
!! | GAAGAAGCCTTATTTGGATA+AGG | + | Chr1:100543886-100543905 | MsG0180006133.01.T01:CDS | 35.0% |
!! | TTAGGAGAAGAAGCCTTATT+TGG | + | Chr1:100543880-100543899 | MsG0180006133.01.T01:intron | 35.0% |
AAAAGGGCTAAAGTTGGGAA+AGG | + | Chr1:100543405-100543424 | MsG0180006133.01.T01:CDS | 40.0% | |
AAAGGGAACACGTTACGAAA+TGG | + | Chr1:100542852-100542871 | MsG0180006133.01.T01:exon | 40.0% | |
AAAGGGCTAAAGTTGGGAAA+GGG | + | Chr1:100543406-100543425 | MsG0180006133.01.T01:CDS | 40.0% | |
GCTGTATGTATAGGATCAAG+AGG | + | Chr1:100544149-100544168 | MsG0180006133.01.T01:intron | 40.0% | |
GGATAAGGTTGTTGAACTGA+AGG | + | Chr1:100543901-100543920 | MsG0180006133.01.T01:CDS | 40.0% | |
GTTACGAAATGGCAACGAAA+AGG | + | Chr1:100542863-100542882 | MsG0180006133.01.T01:exon | 40.0% | |
GTTTGAGGGGTTTAGTTGAT+TGG | + | Chr1:100543536-100543555 | MsG0180006133.01.T01:intron | 40.0% | |
TGGGAAAGGGAAAAAGGTTA+AGG | + | Chr1:100543419-100543438 | MsG0180006133.01.T01:CDS | 40.0% | |
! | GAAGAGTAGTGGTGACATTT+TGG | + | Chr1:100544252-100544271 | MsG0180006133.01.T01:exon | 40.0% |
! | GGGTTCTGATAAGGAAGATA+AGG | + | Chr1:100544170-100544189 | MsG0180006133.01.T01:CDS | 40.0% |
!! | AAATAGGTTGGTAAGGAAGC+TGG | + | Chr1:100543724-100543743 | MsG0180006133.01.T01:intron | 40.0% |
!! | TAAGCTGGTGCTGTATGTAT+AGG | + | Chr1:100544140-100544159 | MsG0180006133.01.T01:intron | 40.0% |
AGGCAGAATATAGAAGGCCA+TGG | + | Chr1:100543921-100543940 | MsG0180006133.01.T01:CDS | 45.0% | |
ATGGCAGTGCTTTCGCTAAA+TGG | + | Chr1:100542935-100542954 | MsG0180006133.01.T01:CDS | 45.0% | |
GGAAGCTAACCCTGATTCAA+AGG | + | Chr1:100543598-100543617 | MsG0180006133.01.T01:CDS | 45.0% | |
TGCATGTCAATGAGTGCAAC+AGG | - | Chr1:100543063-100543082 | None:intergenic | 45.0% | |
! | GAGTAGTGGTGACATTTTGG+TGG | + | Chr1:100544255-100544274 | MsG0180006133.01.T01:exon | 45.0% |
! | GGATCAAGAGGGTTCTGATA+AGG | + | Chr1:100544161-100544180 | MsG0180006133.01.T01:intron | 45.0% |
! | GGGGAAATTTTTCACCTCTC+GGG | - | Chr1:100543272-100543291 | None:intergenic | 45.0% |
! | GGGGGAAATTTTTCACCTCT+CGG | - | Chr1:100543273-100543292 | None:intergenic | 45.0% |
!! | AAGCTGGTGCTGTATGCATA+GGG | + | Chr1:100544044-100544063 | MsG0180006133.01.T01:intron | 45.0% |
!! | TAAGCTGGTGCTGTATGCAT+AGG | + | Chr1:100544043-100544062 | MsG0180006133.01.T01:intron | 45.0% |
CAGCTTCCTTGTCATCAGAC+TGG | - | Chr1:100544200-100544219 | None:intergenic | 50.0% | |
CTGAAGTGAAGAAACCCGAG+AGG | + | Chr1:100543255-100543274 | MsG0180006133.01.T01:CDS | 50.0% | |
GTAAGGAAGCTGGTGAGAAG+TGG | + | Chr1:100543734-100543753 | MsG0180006133.01.T01:CDS | 50.0% | |
GTTCTCGTTCGTGCCAAAGA+TGG | + | Chr1:100542916-100542935 | MsG0180006133.01.T01:CDS | 50.0% | |
TGAAGCGGAACGAGAATCGA+CGG | - | Chr1:100542896-100542915 | None:intergenic | 50.0% | |
!! | AAAGCAGTTGGTGGACGCTT+CGG | - | Chr1:100543456-100543475 | None:intergenic | 50.0% |
!! | AGCGAAAGCACTGCCATCTT+TGG | - | Chr1:100542932-100542951 | None:intergenic | 50.0% |
AGGAAGCTGGTGAGAAGTGG+AGG | + | Chr1:100543737-100543756 | MsG0180006133.01.T01:CDS | 55.0% | |
GAAGTGGAGGTCTCTGACTG+AGG | + | Chr1:100543750-100543769 | MsG0180006133.01.T01:CDS | 55.0% | |
GGAAGGCCAGTCTGATGACA+AGG | + | Chr1:100544191-100544210 | MsG0180006133.01.T01:CDS | 55.0% | |
GGCACGAACGAGAACTGAAG+CGG | - | Chr1:100542911-100542930 | None:intergenic | 55.0% | |
GACAAGGAAGCTGCTGCTGC+AGG | + | Chr1:100544207-100544226 | MsG0180006133.01.T01:CDS | 60.0% | |
AGCTGCTGCTGCAGGAGAGG+TGG | + | Chr1:100544215-100544234 | MsG0180006133.01.T01:CDS | 65.0% | |
GGAAGCTGCTGCTGCAGGAG+AGG | + | Chr1:100544212-100544231 | MsG0180006133.01.T01:CDS | 65.0% | |
GGTGGACGCTTCGGCGCATT+AGG | - | Chr1:100543447-100543466 | None:intergenic | 65.0% | |
TGCTGCTGCAGGAGAGGTGG+AGG | + | Chr1:100544218-100544237 | MsG0180006133.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 100542812 | 100544489 | 100542812 | ID=MsG0180006133.01;Name=MsG0180006133.01 |
Chr1 | mRNA | 100542812 | 100544489 | 100542812 | ID=MsG0180006133.01.T01;Parent=MsG0180006133.01;Name=MsG0180006133.01.T01;_AED=0.26;_eAED=0.28;_QI=59|0.85|0.87|1|1|1|8|229|216 |
Chr1 | exon | 100542812 | 100542956 | 100542812 | ID=MsG0180006133.01.T01:exon:2000;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100543038 | 100543120 | 100543038 | ID=MsG0180006133.01.T01:exon:2001;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100543231 | 100543276 | 100543231 | ID=MsG0180006133.01.T01:exon:2002;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100543374 | 100543487 | 100543374 | ID=MsG0180006133.01.T01:exon:2003;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100543574 | 100543631 | 100543574 | ID=MsG0180006133.01.T01:exon:2004;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100543730 | 100543774 | 100543730 | ID=MsG0180006133.01.T01:exon:2005;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100543884 | 100544003 | 100543884 | ID=MsG0180006133.01.T01:exon:2006;Parent=MsG0180006133.01.T01 |
Chr1 | exon | 100544162 | 100544489 | 100544162 | ID=MsG0180006133.01.T01:exon:2007;Parent=MsG0180006133.01.T01 |
Chr1 | five_prime_UTR | 100542812 | 100542870 | 100542812 | ID=MsG0180006133.01.T01:five_prime_utr;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100542871 | 100542956 | 100542871 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100543038 | 100543120 | 100543038 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100543231 | 100543276 | 100543231 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100543374 | 100543487 | 100543374 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100543574 | 100543631 | 100543574 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100543730 | 100543774 | 100543730 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100543884 | 100544003 | 100543884 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | CDS | 100544162 | 100544260 | 100544162 | ID=MsG0180006133.01.T01:cds;Parent=MsG0180006133.01.T01 |
Chr1 | three_prime_UTR | 100544261 | 100544489 | 100544261 | ID=MsG0180006133.01.T01:three_prime_utr;Parent=MsG0180006133.01.T01 |
Gene Sequence |
Protein sequence |