Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017282.01.T01 | XP_003603163.1 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0 | 899 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017282.01.T01 | O64852 | 59.276 | 442 | 148 | 12 | 1 | 439 | 1 | 413 | 1.16E-146 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017282.01.T01 | G7J7P3 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0.0 | 899 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0380017282.01 | 0.855415 | 6.408818e-62 | 1.478576e-58 |
| MsG0080048258.01 | MsG0380017282.01 | 0.854599 | 1.105627e-61 | 2.482474e-58 |
| MsG0080048775.01 | MsG0380017282.01 | 0.841559 | 4.415708e-58 | 6.513057e-55 |
| MsG0080048781.01 | MsG0380017282.01 | 0.848054 | 7.823353e-60 | 1.417878e-56 |
| MsG0180000111.01 | MsG0380017282.01 | 0.824264 | 8.869493e-54 | 7.816752e-51 |
| MsG0180001293.01 | MsG0380017282.01 | 0.847223 | 1.325061e-59 | 2.338941e-56 |
| MsG0180001588.01 | MsG0380017282.01 | 0.804155 | 2.474281e-49 | 1.266519e-46 |
| MsG0180002211.01 | MsG0380017282.01 | 0.803850 | 2.863759e-49 | 1.454454e-46 |
| MsG0180002218.01 | MsG0380017282.01 | 0.822343 | 2.491605e-53 | 2.079925e-50 |
| MsG0180002397.01 | MsG0380017282.01 | 0.847048 | 1.479734e-59 | 2.597429e-56 |
| MsG0180002583.01 | MsG0380017282.01 | 0.813887 | 2.038329e-51 | 1.347452e-48 |
| MsG0180002936.01 | MsG0380017282.01 | 0.818120 | 2.313963e-52 | 1.716960e-49 |
| MsG0180003421.01 | MsG0380017282.01 | 0.810263 | 1.257551e-50 | 7.545330e-48 |
| MsG0180003427.01 | MsG0380017282.01 | 0.818106 | 2.330603e-52 | 1.728599e-49 |
| MsG0180003485.01 | MsG0380017282.01 | 0.854394 | 1.267833e-61 | 2.827187e-58 |
| MsG0180003658.01 | MsG0380017282.01 | 0.800994 | 1.109801e-48 | 5.241408e-46 |
| MsG0180003698.01 | MsG0380017282.01 | 0.812847 | 3.450199e-51 | 2.217319e-48 |
| MsG0180003796.01 | MsG0380017282.01 | 0.806788 | 6.938962e-50 | 3.800168e-47 |
| MsG0180003857.01 | MsG0380017282.01 | 0.825924 | 3.595371e-54 | 3.322968e-51 |
| MsG0180004120.01 | MsG0380017282.01 | 0.847526 | 1.094094e-59 | 1.950335e-56 |
| MsG0180004299.01 | MsG0380017282.01 | 0.805485 | 1.304738e-49 | 6.911181e-47 |
| MsG0180004375.01 | MsG0380017282.01 | 0.812373 | 4.380655e-51 | 2.780421e-48 |
| MsG0180004471.01 | MsG0380017282.01 | 0.829106 | 6.196495e-55 | 6.280214e-52 |
| MsG0180004538.01 | MsG0380017282.01 | 0.863395 | 2.567590e-64 | 7.771746e-61 |
| MsG0180004583.01 | MsG0380017282.01 | 0.872634 | 2.735542e-67 | 1.153029e-63 |
| MsG0180004661.01 | MsG0380017282.01 | 0.842056 | 3.263195e-58 | 4.888374e-55 |
| MsG0180004994.01 | MsG0380017282.01 | 0.807888 | 4.055686e-50 | 2.285509e-47 |
| MsG0180004995.01 | MsG0380017282.01 | 0.835072 | 2.076009e-56 | 2.510603e-53 |
| MsG0180005002.01 | MsG0380017282.01 | 0.821572 | 3.759286e-53 | 3.069910e-50 |
| MsG0180005048.01 | MsG0380017282.01 | 0.886179 | 4.284746e-72 | 3.028454e-68 |
| MsG0180005553.01 | MsG0380017282.01 | 0.806211 | 9.183996e-50 | 4.956271e-47 |
| MsG0180006062.01 | MsG0380017282.01 | 0.832971 | 6.970257e-56 | 7.916012e-53 |
| MsG0180006133.01 | MsG0380017282.01 | 0.904851 | 7.962483e-80 | 1.254517e-75 |
| MsG0280010579.01 | MsG0380017282.01 | 0.843243 | 1.579833e-58 | 2.456441e-55 |
| MsG0380012118.01 | MsG0380017282.01 | 0.803682 | 3.102847e-49 | 1.569016e-46 |
| MsG0380012818.01 | MsG0380017282.01 | 0.808433 | 3.105207e-50 | 1.775286e-47 |
| MsG0380012956.01 | MsG0380017282.01 | 0.824551 | 7.594083e-54 | 6.748769e-51 |
| MsG0380014666.01 | MsG0380017282.01 | 0.860479 | 2.007876e-63 | 5.496512e-60 |
| MsG0380015090.01 | MsG0380017282.01 | 0.839272 | 1.749887e-57 | 2.404213e-54 |
| MsG0380015189.01 | MsG0380017282.01 | 0.831707 | 1.432720e-55 | 1.567385e-52 |
| MsG0380015219.01 | MsG0380017282.01 | 0.857607 | 1.454936e-62 | 3.611653e-59 |
| MsG0380015350.01 | MsG0380017282.01 | 0.804876 | 1.750402e-49 | 9.128592e-47 |
| MsG0380015394.01 | MsG0380017282.01 | 0.822363 | 2.465270e-53 | 2.059211e-50 |
| MsG0380015825.01 | MsG0380017282.01 | 0.848562 | 5.663218e-60 | 1.043477e-56 |
| MsG0380016027.01 | MsG0380017282.01 | 0.835708 | 1.433403e-56 | 1.767192e-53 |
| MsG0380016091.01 | MsG0380017282.01 | 0.829666 | 4.531567e-55 | 4.669075e-52 |
| MsG0380016225.01 | MsG0380017282.01 | 0.876791 | 1.053947e-68 | 5.177712e-65 |
| MsG0380017150.01 | MsG0380017282.01 | 0.803109 | 4.078633e-49 | 2.032267e-46 |
| MsG0380017164.01 | MsG0380017282.01 | 0.832813 | 7.630334e-56 | 8.624102e-53 |
| MsG0380017181.01 | MsG0380017282.01 | 0.843650 | 1.229863e-58 | 1.937315e-55 |
| MsG0380017282.01 | MsG0380017332.01 | 0.836527 | 8.881843e-57 | 1.122242e-53 |
| MsG0380017282.01 | MsG0380017361.01 | 0.815488 | 9.011901e-52 | 6.222141e-49 |
| MsG0380017282.01 | MsG0380017440.01 | 0.850544 | 1.585359e-60 | 3.116133e-57 |
| MsG0380017282.01 | MsG0380017588.01 | 0.802834 | 4.649258e-49 | 2.300662e-46 |
| MsG0380017282.01 | MsG0380017605.01 | 0.839190 | 1.837861e-57 | 2.518735e-54 |
| MsG0380017282.01 | MsG0380017632.01 | 0.805217 | 1.485395e-49 | 7.813919e-47 |
| MsG0380017282.01 | MsG0380018055.01 | 0.827399 | 1.598742e-54 | 1.541850e-51 |
| MsG0380017282.01 | MsG0480018106.01 | 0.860205 | 2.429809e-63 | 6.589427e-60 |
| MsG0380017282.01 | MsG0480018397.01 | 0.820879 | 5.431165e-53 | 4.350581e-50 |
| MsG0380017282.01 | MsG0480018526.01 | 0.830136 | 3.480383e-55 | 3.635059e-52 |
| MsG0380017282.01 | MsG0480018785.01 | 0.854812 | 9.592185e-62 | 2.169201e-58 |
| MsG0380017282.01 | MsG0480020366.01 | 0.813314 | 2.725853e-51 | 1.774082e-48 |
| MsG0380017282.01 | MsG0480020398.01 | 0.813502 | 2.478421e-51 | 1.621376e-48 |
| MsG0380017282.01 | MsG0480020856.01 | 0.805790 | 1.126239e-49 | 6.012691e-47 |
| MsG0380017282.01 | MsG0480021100.01 | 0.800550 | 1.367572e-48 | 6.385748e-46 |
| MsG0380017282.01 | MsG0480021301.01 | 0.847546 | 1.079791e-59 | 1.926076e-56 |
| MsG0380017282.01 | MsG0480021449.01 | 0.801088 | 1.061970e-48 | 5.027331e-46 |
| MsG0380017282.01 | MsG0480021454.01 | 0.811286 | 7.552822e-51 | 4.656391e-48 |
| MsG0380017282.01 | MsG0480021456.01 | 0.844601 | 6.833387e-59 | 1.108905e-55 |
| MsG0380017282.01 | MsG0480021773.01 | 0.817882 | 2.618838e-52 | 1.930509e-49 |
| MsG0380017282.01 | MsG0480021901.01 | 0.803362 | 3.614982e-49 | 1.812948e-46 |
| MsG0380017282.01 | MsG0480021902.01 | 0.844477 | 7.379579e-59 | 1.192839e-55 |
| MsG0380017282.01 | MsG0480022307.01 | 0.821665 | 3.577508e-53 | 2.929175e-50 |
| MsG0380017282.01 | MsG0480022442.01 | 0.811390 | 7.170488e-51 | 4.432931e-48 |
| MsG0380017282.01 | MsG0480022559.01 | 0.817376 | 3.404450e-52 | 2.475232e-49 |
| MsG0380017282.01 | MsG0480022784.01 | 0.871258 | 7.835123e-67 | 3.140144e-63 |
| MsG0380017282.01 | MsG0480022982.01 | 0.810617 | 1.054329e-50 | 6.385859e-48 |
| MsG0380017282.01 | MsG0480022991.01 | 0.842586 | 2.362955e-58 | 3.599409e-55 |
| MsG0380017282.01 | MsG0480022998.01 | 0.837132 | 6.224049e-57 | 8.009100e-54 |
| MsG0380017282.01 | MsG0480023003.01 | 0.852221 | 5.322451e-61 | 1.104495e-57 |
| MsG0380017282.01 | MsG0480023194.01 | 0.813960 | 1.964961e-51 | 1.301456e-48 |
| MsG0380017282.01 | MsG0480023296.01 | 0.819944 | 8.900276e-53 | 6.946509e-50 |
| MsG0380017282.01 | MsG0480023424.01 | 0.842896 | 1.953599e-58 | 3.004700e-55 |
| MsG0380017282.01 | MsG0480023426.01 | 0.827541 | 1.478184e-54 | 1.431243e-51 |
| MsG0380017282.01 | MsG0480023653.01 | 0.852555 | 4.275951e-61 | 8.967735e-58 |
| MsG0380017282.01 | MsG0480023672.01 | 0.819477 | 1.138094e-52 | 8.767720e-50 |
| MsG0380017282.01 | MsG0480023706.01 | 0.867202 | 1.628544e-65 | 5.637852e-62 |
| MsG0380017282.01 | MsG0480024002.01 | 0.800762 | 1.237707e-48 | 5.810538e-46 |
| MsG0380017282.01 | MsG0580024060.01 | 0.802461 | 5.549170e-49 | 2.719862e-46 |
| MsG0380017282.01 | MsG0580024158.01 | 0.856147 | 3.916654e-62 | 9.257749e-59 |
| MsG0380017282.01 | MsG0580024388.01 | 0.818620 | 1.782711e-52 | 1.341079e-49 |
| MsG0380017282.01 | MsG0580024742.01 | 0.831507 | 1.605262e-55 | 1.745585e-52 |
| MsG0380017282.01 | MsG0580024748.01 | 0.831235 | 1.872304e-55 | 2.019473e-52 |
| MsG0380017282.01 | MsG0580024787.01 | 0.879444 | 1.240488e-69 | 6.727490e-66 |
| MsG0380017282.01 | MsG0580024835.01 | 0.818115 | 2.319359e-52 | 1.720735e-49 |
| MsG0380017282.01 | MsG0580024954.01 | 0.870583 | 1.307451e-66 | 5.112190e-63 |
| MsG0380017282.01 | MsG0580025124.01 | 0.835287 | 1.832444e-56 | 2.230896e-53 |
| MsG0380017282.01 | MsG0580025177.01 | 0.878093 | 3.710541e-69 | 1.911962e-65 |
| MsG0380017282.01 | MsG0580025186.01 | 0.839972 | 1.150566e-57 | 1.615560e-54 |
| MsG0380017282.01 | MsG0580025203.01 | 0.860605 | 1.838129e-63 | 5.053628e-60 |
| MsG0380017282.01 | MsG0580025504.01 | 0.828395 | 9.207349e-55 | 9.140719e-52 |
| MsG0380017282.01 | MsG0580025506.01 | 0.878572 | 2.519909e-69 | 1.322482e-65 |
| MsG0380017282.01 | MsG0580025775.01 | 0.842666 | 2.249683e-58 | 3.435109e-55 |
| MsG0380017282.01 | MsG0580028756.01 | 0.854006 | 1.640541e-61 | 3.612363e-58 |
| MsG0380017282.01 | MsG0580028923.01 | 0.829170 | 5.980039e-55 | 6.072748e-52 |
| MsG0380017282.01 | MsG0580028927.01 | 0.806072 | 9.822112e-50 | 5.281684e-47 |
| MsG0380017282.01 | MsG0580028955.01 | 0.857237 | 1.871475e-62 | 4.588051e-59 |
| MsG0380017282.01 | MsG0580029102.01 | 0.802897 | 4.510994e-49 | 2.235743e-46 |
| MsG0380017282.01 | MsG0580029123.01 | 0.820216 | 7.711419e-53 | 6.064180e-50 |
| MsG0380017282.01 | MsG0580029261.01 | 0.855253 | 7.141830e-62 | 1.638664e-58 |
| MsG0380017282.01 | MsG0580029268.01 | 0.822113 | 2.818336e-53 | 2.337066e-50 |
| MsG0380017282.01 | MsG0580029591.01 | 0.869211 | 3.668749e-66 | 1.365592e-62 |
| MsG0380017282.01 | MsG0680031701.01 | 0.827161 | 1.822725e-54 | 1.745514e-51 |
| MsG0380017282.01 | MsG0680033696.01 | 0.800029 | 1.745653e-48 | 8.044206e-46 |
| MsG0380017282.01 | MsG0680035350.01 | 0.825781 | 3.887628e-54 | 3.578526e-51 |
| MsG0380017282.01 | MsG0680035776.01 | 0.867596 | 1.217697e-65 | 4.275466e-62 |
| MsG0380017282.01 | MsG0680035792.01 | 0.880324 | 6.028776e-70 | 3.381400e-66 |
| MsG0380017282.01 | MsG0680035878.01 | 0.826966 | 2.029893e-54 | 1.932892e-51 |
| MsG0380017282.01 | MsG0780035954.01 | 0.814730 | 1.327611e-51 | 8.978660e-49 |
| MsG0380017282.01 | MsG0780036534.01 | 0.838094 | 3.527051e-57 | 4.674512e-54 |
| MsG0380017282.01 | MsG0780037741.01 | 0.845695 | 3.458736e-59 | 5.812519e-56 |
| MsG0380017282.01 | MsG0780038373.01 | 0.814209 | 1.731045e-51 | 1.154282e-48 |
| MsG0380017282.01 | MsG0780038402.01 | 0.808641 | 2.802672e-50 | 1.610953e-47 |
| MsG0380017282.01 | MsG0780038736.01 | 0.834112 | 3.618030e-56 | 4.251755e-53 |
| MsG0380017282.01 | MsG0780039303.01 | 0.803374 | 3.594624e-49 | 1.803337e-46 |
| MsG0380017282.01 | MsG0780039578.01 | 0.831192 | 1.919085e-55 | 2.067343e-52 |
| MsG0380017282.01 | MsG0780039861.01 | 0.845192 | 4.733413e-59 | 7.825833e-56 |
| MsG0380017282.01 | MsG0780040364.01 | 0.832178 | 1.096603e-55 | 1.216251e-52 |
| MsG0380017282.01 | MsG0780040533.01 | 0.827995 | 1.149436e-54 | 1.127879e-51 |
| MsG0380017282.01 | MsG0780040620.01 | 0.877580 | 5.607286e-69 | 2.833349e-65 |
| MsG0380017282.01 | MsG0780040641.01 | 0.860453 | 2.044328e-63 | 5.591121e-60 |
| MsG0380017282.01 | MsG0780041008.01 | 0.803828 | 2.892816e-49 | 1.468395e-46 |
| MsG0380017282.01 | MsG0780041063.01 | 0.830371 | 3.050047e-55 | 3.207293e-52 |
| MsG0380017282.01 | MsG0780041132.01 | 0.812259 | 4.638310e-51 | 2.935064e-48 |
| MsG0380017282.01 | MsG0780041142.01 | 0.808429 | 3.110571e-50 | 1.778202e-47 |
| MsG0380017282.01 | MsG0780041143.01 | 0.839067 | 1.977615e-57 | 2.700042e-54 |
| MsG0380017282.01 | MsG0780041273.01 | 0.830998 | 2.140890e-55 | 2.293156e-52 |
| MsG0380017282.01 | MsG0780041340.01 | 0.815765 | 7.816042e-52 | 5.437675e-49 |
| MsG0380017282.01 | MsG0780041359.01 | 0.860537 | 1.927492e-63 | 5.286744e-60 |
| MsG0380017282.01 | MsG0780041546.01 | 0.820218 | 7.704382e-53 | 6.058954e-50 |
| MsG0380017282.01 | MsG0780041660.01 | 0.827957 | 1.173810e-54 | 1.150542e-51 |
| MsG0380017282.01 | MsG0880042906.01 | 0.808471 | 3.047133e-50 | 1.743857e-47 |
| MsG0380017282.01 | MsG0880043637.01 | 0.842274 | 2.858203e-58 | 4.311347e-55 |
| MsG0380017282.01 | MsG0880043684.01 | 0.806775 | 6.981755e-50 | 3.822305e-47 |
| MsG0380017282.01 | MsG0880043714.01 | 0.823591 | 1.275874e-53 | 1.103332e-50 |
| MsG0380017282.01 | MsG0880043752.01 | 0.806519 | 7.910340e-50 | 4.302391e-47 |
| MsG0380017282.01 | MsG0880043907.01 | 0.813641 | 2.308951e-51 | 1.516198e-48 |
| MsG0380017282.01 | MsG0880045015.01 | 0.843287 | 1.537627e-58 | 2.394473e-55 |
| MsG0380017282.01 | MsG0880045430.01 | 0.802485 | 5.485608e-49 | 2.690323e-46 |
| MsG0380017282.01 | MsG0880045612.01 | 0.870221 | 1.718854e-66 | 6.634518e-63 |
| MsG0380017282.01 | MsG0880045647.01 | 0.844951 | 5.498675e-59 | 9.022440e-56 |
| MsG0380017282.01 | MsG0880045890.01 | 0.812772 | 3.583259e-51 | 2.298311e-48 |
| MsG0380017282.01 | MsG0880046431.01 | 0.808494 | 3.012902e-50 | 1.725240e-47 |
| MsG0380017282.01 | MsG0880046529.01 | 0.832854 | 7.453083e-56 | 8.434437e-53 |
| MsG0380017282.01 | MsG0880046646.01 | 0.827207 | 1.776988e-54 | 1.704055e-51 |
| MsG0380017282.01 | MsG0880046885.01 | 0.816045 | 6.769042e-52 | 4.745469e-49 |
| MsG0380017282.01 | MsG0880046904.01 | 0.845966 | 2.919899e-59 | 4.950069e-56 |
| MsG0380017282.01 | MsG0880046905.01 | 0.850071 | 2.152597e-60 | 4.166438e-57 |
| MsG0380017282.01 | MsG0880046993.01 | 0.841700 | 4.054347e-58 | 6.005478e-55 |
| MsG0380017282.01 | MsG0880047059.01 | 0.840345 | 9.197448e-58 | 1.306253e-54 |
| MsG0380017282.01 | MsG0880047649.01 | 0.880549 | 5.009287e-70 | 2.836245e-66 |
| MsG0280006540.01 | MsG0380017282.01 | 0.829020 | 6.500205e-55 | 6.571109e-52 |
| MsG0280006563.01 | MsG0380017282.01 | 0.860759 | 1.651045e-63 | 4.563505e-60 |
| MsG0280007092.01 | MsG0380017282.01 | 0.822125 | 2.799456e-53 | 2.322316e-50 |
| MsG0280007492.01 | MsG0380017282.01 | 0.839225 | 1.799774e-57 | 2.469275e-54 |
| MsG0280009866.01 | MsG0380017282.01 | 0.847216 | 1.330766e-59 | 2.348456e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017282.01.T01 | MTR_3g104570 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0.0 | 899 |
| MsG0380017282.01.T01 | MTR_8g017570 | 44.266 | 436 | 223 | 9 | 1 | 432 | 1 | 420 | 2.62e-76 | 245 |
| MsG0380017282.01.T01 | MTR_2g099780 | 44.548 | 431 | 189 | 13 | 1 | 427 | 1 | 385 | 2.89e-72 | 234 |
| MsG0380017282.01.T01 | MTR_4g050480 | 46.953 | 279 | 124 | 6 | 1 | 268 | 1 | 266 | 1.36e-59 | 201 |
| MsG0380017282.01.T01 | MTR_4g050480 | 47.122 | 278 | 124 | 6 | 1 | 268 | 1 | 265 | 1.73e-58 | 198 |
| MsG0380017282.01.T01 | MTR_6g033415 | 39.286 | 308 | 146 | 8 | 89 | 380 | 105 | 387 | 1.22e-44 | 161 |
| MsG0380017282.01.T01 | MTR_1g095740 | 43.017 | 179 | 88 | 4 | 90 | 263 | 140 | 309 | 3.88e-37 | 142 |
| MsG0380017282.01.T01 | MTR_8g024540 | 43.299 | 194 | 82 | 5 | 88 | 265 | 124 | 305 | 6.60e-36 | 139 |
| MsG0380017282.01.T01 | MTR_1g066800 | 45.026 | 191 | 85 | 6 | 72 | 259 | 103 | 276 | 1.67e-35 | 137 |
| MsG0380017282.01.T01 | MTR_1g066800 | 45.026 | 191 | 85 | 6 | 72 | 259 | 108 | 281 | 1.92e-35 | 137 |
| MsG0380017282.01.T01 | MTR_7g100790 | 42.035 | 226 | 107 | 7 | 50 | 265 | 64 | 275 | 2.66e-35 | 136 |
| MsG0380017282.01.T01 | MTR_2g015370 | 35.200 | 250 | 123 | 8 | 93 | 332 | 65 | 285 | 1.93e-32 | 125 |
| MsG0380017282.01.T01 | MTR_2g078210 | 35.981 | 214 | 126 | 6 | 58 | 270 | 42 | 245 | 3.40e-32 | 125 |
| MsG0380017282.01.T01 | MTR_2g078210 | 39.665 | 179 | 98 | 5 | 93 | 270 | 16 | 185 | 7.19e-32 | 122 |
| MsG0380017282.01.T01 | MTR_0047s0040 | 31.897 | 232 | 130 | 5 | 50 | 276 | 60 | 268 | 8.05e-29 | 117 |
| MsG0380017282.01.T01 | MTR_4g087420 | 29.830 | 352 | 208 | 12 | 56 | 386 | 112 | 445 | 8.07e-29 | 119 |
| MsG0380017282.01.T01 | MTR_1g007920 | 39.604 | 202 | 101 | 3 | 86 | 267 | 117 | 317 | 3.30e-25 | 108 |
| MsG0380017282.01.T01 | MTR_1g007920 | 39.604 | 202 | 101 | 3 | 86 | 267 | 92 | 292 | 3.33e-25 | 107 |
| MsG0380017282.01.T01 | MTR_1g103070 | 47.619 | 105 | 53 | 1 | 90 | 192 | 135 | 239 | 4.89e-23 | 101 |
| MsG0380017282.01.T01 | MTR_3g020990 | 46.018 | 113 | 53 | 2 | 104 | 215 | 103 | 208 | 1.04e-21 | 94.0 |
| MsG0380017282.01.T01 | MTR_7g114700 | 30.481 | 187 | 107 | 3 | 86 | 268 | 130 | 297 | 1.31e-21 | 97.1 |
| MsG0380017282.01.T01 | MTR_8g014580 | 62.162 | 74 | 28 | 0 | 85 | 158 | 120 | 193 | 4.45e-21 | 95.1 |
| MsG0380017282.01.T01 | MTR_8g074730 | 40.000 | 140 | 74 | 3 | 28 | 159 | 2 | 139 | 8.15e-21 | 88.6 |
| MsG0380017282.01.T01 | MTR_3g091560 | 38.624 | 189 | 110 | 3 | 91 | 279 | 112 | 294 | 1.14e-20 | 94.4 |
| MsG0380017282.01.T01 | MTR_8g102400 | 39.665 | 179 | 81 | 6 | 1 | 155 | 1 | 176 | 3.19e-20 | 92.8 |
| MsG0380017282.01.T01 | MTR_0019s0070 | 56.098 | 82 | 36 | 0 | 86 | 167 | 112 | 193 | 1.20e-19 | 91.3 |
| MsG0380017282.01.T01 | MTR_2g100740 | 36.628 | 172 | 89 | 5 | 1 | 159 | 1 | 165 | 1.25e-18 | 87.4 |
| MsG0380017282.01.T01 | MTR_1g101330 | 58.571 | 70 | 29 | 0 | 90 | 159 | 114 | 183 | 1.91e-18 | 87.8 |
| MsG0380017282.01.T01 | MTR_4g108140 | 29.779 | 272 | 152 | 8 | 1 | 262 | 1 | 243 | 3.65e-18 | 87.4 |
| MsG0380017282.01.T01 | MTR_4g108140 | 33.158 | 190 | 97 | 5 | 74 | 262 | 82 | 242 | 4.91e-18 | 87.0 |
| MsG0380017282.01.T01 | MTR_4g102840 | 35.185 | 162 | 86 | 5 | 1 | 154 | 1 | 151 | 8.01e-18 | 85.5 |
| MsG0380017282.01.T01 | MTR_7g114870 | 56.716 | 67 | 29 | 0 | 93 | 159 | 108 | 174 | 1.94e-17 | 84.0 |
| MsG0380017282.01.T01 | MTR_1g041430 | 47.222 | 108 | 52 | 1 | 90 | 192 | 110 | 217 | 7.02e-17 | 82.8 |
| MsG0380017282.01.T01 | MTR_1g051810 | 32.847 | 137 | 81 | 2 | 93 | 220 | 107 | 241 | 7.77e-13 | 70.1 |
| MsG0380017282.01.T01 | MTR_5g038620 | 35.484 | 124 | 64 | 3 | 69 | 191 | 99 | 207 | 1.50e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017282.01.T01 | AT2G26180 | 59.276 | 442 | 148 | 12 | 1 | 439 | 1 | 413 | 1.19e-147 | 427 |
| MsG0380017282.01.T01 | AT1G72670 | 45.372 | 443 | 193 | 12 | 1 | 436 | 1 | 401 | 1.74e-94 | 291 |
| MsG0380017282.01.T01 | AT1G17480 | 37.277 | 448 | 196 | 14 | 1 | 440 | 1 | 371 | 1.19e-65 | 215 |
| MsG0380017282.01.T01 | AT3G22190 | 44.803 | 279 | 123 | 9 | 1 | 268 | 1 | 259 | 1.35e-49 | 174 |
| MsG0380017282.01.T01 | AT3G22190 | 44.803 | 279 | 123 | 9 | 1 | 268 | 1 | 259 | 1.35e-49 | 174 |
| MsG0380017282.01.T01 | AT3G22190 | 44.803 | 279 | 123 | 9 | 1 | 268 | 1 | 259 | 1.35e-49 | 174 |
| MsG0380017282.01.T01 | AT3G22190 | 44.803 | 279 | 123 | 9 | 1 | 268 | 1 | 259 | 1.35e-49 | 174 |
| MsG0380017282.01.T01 | AT5G03040 | 34.954 | 329 | 178 | 11 | 71 | 382 | 94 | 403 | 8.89e-41 | 151 |
| MsG0380017282.01.T01 | AT5G03040 | 34.954 | 329 | 178 | 11 | 71 | 382 | 94 | 403 | 8.89e-41 | 151 |
| MsG0380017282.01.T01 | AT5G03040 | 34.954 | 329 | 178 | 11 | 71 | 382 | 94 | 403 | 8.89e-41 | 151 |
| MsG0380017282.01.T01 | AT4G00820 | 31.695 | 407 | 176 | 14 | 89 | 443 | 130 | 486 | 1.00e-37 | 144 |
| MsG0380017282.01.T01 | AT1G01110 | 30.918 | 414 | 229 | 12 | 14 | 385 | 44 | 442 | 1.43e-36 | 141 |
| MsG0380017282.01.T01 | AT3G52290 | 40.217 | 184 | 101 | 2 | 90 | 273 | 107 | 281 | 2.78e-35 | 135 |
| MsG0380017282.01.T01 | AT3G09710 | 38.839 | 224 | 108 | 7 | 64 | 269 | 67 | 279 | 1.98e-32 | 128 |
| MsG0380017282.01.T01 | AT3G15050 | 36.726 | 226 | 114 | 7 | 91 | 315 | 50 | 247 | 3.17e-32 | 123 |
| MsG0380017282.01.T01 | AT3G49260 | 40.513 | 195 | 93 | 4 | 86 | 265 | 115 | 301 | 3.74e-32 | 128 |
| MsG0380017282.01.T01 | AT3G49260 | 40.000 | 195 | 93 | 4 | 86 | 265 | 115 | 300 | 3.92e-32 | 127 |
| MsG0380017282.01.T01 | AT3G49260 | 40.000 | 195 | 93 | 4 | 86 | 265 | 115 | 300 | 3.92e-32 | 127 |
| MsG0380017282.01.T01 | AT3G49260 | 40.000 | 195 | 93 | 4 | 86 | 265 | 115 | 300 | 3.92e-32 | 127 |
| MsG0380017282.01.T01 | AT3G09710 | 36.709 | 237 | 109 | 8 | 64 | 269 | 67 | 293 | 5.98e-31 | 124 |
| MsG0380017282.01.T01 | AT2G33990 | 37.288 | 177 | 100 | 4 | 90 | 265 | 46 | 212 | 3.26e-29 | 115 |
| MsG0380017282.01.T01 | AT4G10640 | 31.864 | 295 | 154 | 9 | 15 | 278 | 22 | 300 | 3.32e-27 | 113 |
| MsG0380017282.01.T01 | AT2G26410 | 35.028 | 177 | 106 | 4 | 89 | 263 | 146 | 315 | 1.68e-25 | 109 |
| MsG0380017282.01.T01 | AT2G26410 | 35.028 | 177 | 106 | 4 | 89 | 263 | 146 | 315 | 1.68e-25 | 109 |
| MsG0380017282.01.T01 | AT5G13460 | 31.897 | 232 | 120 | 8 | 58 | 284 | 86 | 284 | 1.07e-22 | 100 |
| MsG0380017282.01.T01 | AT4G14750 | 31.224 | 237 | 142 | 7 | 1 | 221 | 1 | 232 | 8.59e-22 | 97.1 |
| MsG0380017282.01.T01 | AT4G14750 | 31.224 | 237 | 142 | 7 | 1 | 221 | 60 | 291 | 1.75e-21 | 97.1 |
| MsG0380017282.01.T01 | AT4G14750 | 31.224 | 237 | 142 | 7 | 1 | 221 | 60 | 291 | 1.78e-21 | 97.1 |
| MsG0380017282.01.T01 | AT2G43680 | 32.402 | 179 | 102 | 5 | 77 | 255 | 311 | 470 | 2.18e-21 | 97.4 |
| MsG0380017282.01.T01 | AT2G43680 | 32.402 | 179 | 102 | 5 | 77 | 255 | 311 | 470 | 2.18e-21 | 97.4 |
| MsG0380017282.01.T01 | AT2G43680 | 32.402 | 179 | 102 | 5 | 77 | 255 | 311 | 470 | 2.18e-21 | 97.4 |
| MsG0380017282.01.T01 | AT2G43680 | 32.402 | 179 | 102 | 5 | 77 | 255 | 311 | 470 | 2.18e-21 | 97.4 |
| MsG0380017282.01.T01 | AT2G43680 | 32.402 | 179 | 102 | 5 | 77 | 255 | 312 | 471 | 2.39e-21 | 97.4 |
| MsG0380017282.01.T01 | AT3G59690 | 32.000 | 175 | 103 | 4 | 81 | 255 | 160 | 318 | 3.79e-21 | 96.3 |
| MsG0380017282.01.T01 | AT3G59690 | 32.000 | 175 | 103 | 4 | 81 | 255 | 160 | 318 | 3.79e-21 | 96.3 |
| MsG0380017282.01.T01 | AT1G51960 | 33.654 | 208 | 116 | 7 | 1 | 198 | 1 | 196 | 1.61e-19 | 90.1 |
| MsG0380017282.01.T01 | AT4G23060 | 57.333 | 75 | 32 | 0 | 91 | 165 | 167 | 241 | 2.31e-18 | 87.8 |
| MsG0380017282.01.T01 | AT3G16490 | 48.352 | 91 | 39 | 2 | 90 | 180 | 106 | 188 | 5.46e-18 | 85.9 |
| MsG0380017282.01.T01 | AT1G18840 | 48.052 | 77 | 40 | 0 | 88 | 164 | 106 | 182 | 7.41e-18 | 86.7 |
| MsG0380017282.01.T01 | AT1G18840 | 48.052 | 77 | 40 | 0 | 88 | 164 | 106 | 182 | 7.41e-18 | 86.7 |
| MsG0380017282.01.T01 | AT1G18840 | 48.052 | 77 | 40 | 0 | 88 | 164 | 106 | 182 | 7.41e-18 | 86.7 |
| MsG0380017282.01.T01 | AT5G07240 | 66.667 | 63 | 20 | 1 | 90 | 151 | 104 | 166 | 1.99e-17 | 84.3 |
| MsG0380017282.01.T01 | AT5G07240 | 66.667 | 63 | 20 | 1 | 90 | 151 | 150 | 212 | 2.63e-17 | 84.3 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 3.45e-16 | 81.6 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 3.45e-16 | 81.6 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 3.45e-16 | 81.6 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 4.34e-16 | 81.3 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 4.34e-16 | 81.3 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 4.34e-16 | 81.3 |
| MsG0380017282.01.T01 | AT1G14380 | 35.928 | 167 | 90 | 6 | 1 | 157 | 1 | 160 | 5.01e-16 | 80.9 |
| MsG0380017282.01.T01 | AT3G51380 | 57.812 | 64 | 27 | 0 | 89 | 152 | 35 | 98 | 8.80e-16 | 73.2 |
| MsG0380017282.01.T01 | AT4G29150 | 61.538 | 65 | 25 | 0 | 89 | 153 | 129 | 193 | 1.05e-15 | 79.0 |
| MsG0380017282.01.T01 | AT1G74690 | 38.462 | 117 | 67 | 1 | 62 | 178 | 84 | 195 | 2.59e-15 | 78.6 |
| MsG0380017282.01.T01 | AT1G01110 | 27.778 | 288 | 163 | 9 | 134 | 385 | 1 | 279 | 1.41e-14 | 75.5 |
| MsG0380017282.01.T01 | AT5G03960 | 37.226 | 137 | 75 | 2 | 93 | 222 | 109 | 241 | 1.46e-14 | 75.5 |
| MsG0380017282.01.T01 | AT5G03960 | 37.226 | 137 | 75 | 2 | 93 | 222 | 110 | 242 | 1.48e-14 | 75.5 |
| MsG0380017282.01.T01 | AT5G03960 | 37.226 | 137 | 75 | 2 | 93 | 222 | 110 | 242 | 1.48e-14 | 75.5 |
| MsG0380017282.01.T01 | AT5G62070 | 61.667 | 60 | 23 | 0 | 86 | 145 | 112 | 171 | 1.98e-14 | 75.1 |
| MsG0380017282.01.T01 | AT3G49380 | 37.778 | 135 | 69 | 3 | 19 | 147 | 41 | 166 | 1.99e-14 | 74.7 |
| MsG0380017282.01.T01 | AT1G19870 | 38.739 | 111 | 46 | 3 | 64 | 152 | 166 | 276 | 1.12e-12 | 70.5 |
| MsG0380017282.01.T01 | AT1G19870 | 53.226 | 62 | 29 | 0 | 91 | 152 | 32 | 93 | 1.84e-12 | 69.7 |
| MsG0380017282.01.T01 | AT2G02790 | 41.892 | 74 | 43 | 0 | 84 | 157 | 100 | 173 | 9.30e-11 | 64.3 |
| MsG0380017282.01.T01 | AT2G02790 | 41.892 | 74 | 43 | 0 | 84 | 157 | 100 | 173 | 9.30e-11 | 64.3 |
Find 132 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGACGAATTGTCAATTTA+TGG | 0.120322 | 3:-94453278 | MsG0380017282.01.T01:three_prime_UTR |
| TCATGGGTGCTTCTGGAAAA+TGG | 0.162318 | 3:-94455664 | MsG0380017282.01.T01:CDS |
| AACGAGTAGTTTGTCCAATA+TGG | 0.223335 | 3:+94453886 | None:intergenic |
| CAACAAGATGTTGAACTTCT+TGG | 0.237700 | 3:+94453445 | None:intergenic |
| CGGTGAGACCATGGTGAAAA+AGG | 0.254663 | 3:-94453515 | MsG0380017282.01.T01:exon |
| AAGGGTTCTGCAAATTTCTT+TGG | 0.258449 | 3:+94453990 | None:intergenic |
| TGAGTCAGGTTCATGTAATT+TGG | 0.262145 | 3:+94453735 | None:intergenic |
| GCAACACTCATGGGTGCTTC+TGG | 0.264318 | 3:-94455671 | MsG0380017282.01.T01:exon |
| AACCACTTTCCGCGCCTTCT+TGG | 0.292272 | 3:-94455279 | MsG0380017282.01.T01:intron |
| CCATGAGTGTTGCTGAGTTT+TGG | 0.299452 | 3:+94455681 | None:intergenic |
| CTTTGTTCATCTCGTGATTC+CGG | 0.304293 | 3:+94454123 | None:intergenic |
| AATTTCTTTGGAGGTGGTGG+TGG | 0.338921 | 3:+94454002 | None:intergenic |
| CTCAACCTGGAGAGATTATC+TGG | 0.341877 | 3:-94453297 | MsG0380017282.01.T01:three_prime_UTR |
| TGGACGAATTGTCAATTTAT+GGG | 0.347242 | 3:-94453277 | MsG0380017282.01.T01:three_prime_UTR |
| GCCAAGCCTCCTCCCCATAT+TGG | 0.354504 | 3:-94453900 | MsG0380017282.01.T01:CDS |
| AACCAAGGCAAAGCTAAAAT+CGG | 0.368576 | 3:-94453709 | MsG0380017282.01.T01:CDS |
| AATTGTTCATTTGTGAGTAT+TGG | 0.372492 | 3:-94453325 | MsG0380017282.01.T01:three_prime_UTR |
| TTGCCTTGGTTGATTGAGTC+AGG | 0.373865 | 3:+94453721 | None:intergenic |
| ACATGTTGTTCATCTTTGTC+TGG | 0.374417 | 3:+94455614 | None:intergenic |
| TCCAATATGGGGAGGAGGCT+TGG | 0.388451 | 3:+94453899 | None:intergenic |
| CACCGAGCTCTTGTCCGATT+GGG | 0.391424 | 3:+94453533 | None:intergenic |
| TGAGGATTCAAGCACTTGTC+AGG | 0.392686 | 3:-94454882 | MsG0380017282.01.T01:CDS |
| CACGAGATGAACAAAGCTAA+TGG | 0.399444 | 3:-94454116 | MsG0380017282.01.T01:CDS |
| AGAAGGCGCGGAAAGTGGTT+TGG | 0.400404 | 3:+94455282 | None:intergenic |
| ACGAGATGAACAAAGCTAAT+GGG | 0.406154 | 3:-94454115 | MsG0380017282.01.T01:CDS |
| ACCCTTCAGAAGCTGCTTTG+TGG | 0.408756 | 3:+94455414 | None:intergenic |
| GCCTTGGGAGACTAGATTGA+TGG | 0.409779 | 3:-94454057 | MsG0380017282.01.T01:CDS |
| GATGGAGTTGGTTGGAAAGA+TGG | 0.411885 | 3:-94454091 | MsG0380017282.01.T01:CDS |
| ATTTCTTTGGAGGTGGTGGT+GGG | 0.414690 | 3:+94454003 | None:intergenic |
| TCACCGAGCTCTTGTCCGAT+TGG | 0.433938 | 3:+94453532 | None:intergenic |
| CATGGGTGCTTCTGGAAAAT+GGG | 0.436014 | 3:-94455663 | MsG0380017282.01.T01:CDS |
| AAATGGGTCAAAGCATTAAT+CGG | 0.439295 | 3:-94455647 | MsG0380017282.01.T01:CDS |
| GCAAATTTCTTTGGAGGTGG+TGG | 0.441550 | 3:+94453999 | None:intergenic |
| CAAATGAACAATTATACAAA+TGG | 0.444321 | 3:+94453335 | None:intergenic |
| AAGGGCTTTGAGGGCATTGA+AGG | 0.446119 | 3:-94454911 | MsG0380017282.01.T01:CDS |
| TCTGCAAATTTCTTTGGAGG+TGG | 0.447772 | 3:+94453996 | None:intergenic |
| TTAGACTTGTTAGGCAAGAA+TGG | 0.452196 | 3:-94455319 | MsG0380017282.01.T01:CDS |
| ACGAGTAGTTTGTCCAATAT+GGG | 0.453398 | 3:+94453887 | None:intergenic |
| TTTGAGATTTCCAGCAATGC+AGG | 0.455042 | 3:-94454193 | MsG0380017282.01.T01:intron |
| AGCTCAAAGGCAACAGTCAA+TGG | 0.457003 | 3:-94453664 | MsG0380017282.01.T01:CDS |
| TAGACTTGTTAGGCAAGAAT+GGG | 0.462512 | 3:-94455318 | MsG0380017282.01.T01:CDS |
| GGTTCTGCAAATTTCTTTGG+AGG | 0.465140 | 3:+94453993 | None:intergenic |
| TGCAGGCAAGAAGGGCTTTG+AGG | 0.465225 | 3:-94454921 | MsG0380017282.01.T01:intron |
| GATGGATGGCAGCCAAGCCT+TGG | 0.468070 | 3:-94454073 | MsG0380017282.01.T01:CDS |
| ACATCAACAACTCCAATGTC+AGG | 0.468785 | 3:-94453801 | MsG0380017282.01.T01:CDS |
| CAAGTCCAAGTTCTGAGTTT+CGG | 0.470169 | 3:-94453857 | MsG0380017282.01.T01:CDS |
| CTAACAAGTCTAAAATCCTT+AGG | 0.472089 | 3:+94455329 | None:intergenic |
| GCAGGCAAGAAGGGCTTTGA+GGG | 0.472599 | 3:-94454920 | MsG0380017282.01.T01:intron |
| TCGTCGTGTGAGGATGTCTA+TGG | 0.489827 | 3:-94454779 | MsG0380017282.01.T01:CDS |
| AGCACTTGTCAGGGGTAGAC+AGG | 0.490557 | 3:-94454872 | MsG0380017282.01.T01:CDS |
| AGAGAGAGAAAGAGAGAATG+TGG | 0.498371 | 3:+94455714 | None:intergenic |
| CATCAGGAGATAACAGTTCA+TGG | 0.499820 | 3:-94455457 | MsG0380017282.01.T01:CDS |
| TTTCTTTGGAGGTGGTGGTG+GGG | 0.501575 | 3:+94454004 | None:intergenic |
| CTTCAGAAGCTGCTTTGTGG+TGG | 0.503461 | 3:+94455417 | None:intergenic |
| TGAGTTTCAATTTATGAAGA+GGG | 0.508341 | 3:-94453640 | MsG0380017282.01.T01:CDS |
| CGCGAATTAGTGCTTGAGGT+TGG | 0.508554 | 3:+94454170 | None:intergenic |
| TGTTTGAAGGTGAAGGAGGG+TGG | 0.510225 | 3:-94455512 | MsG0380017282.01.T01:intron |
| ATGGATGGCAGCCAAGCCTT+GGG | 0.511965 | 3:-94454072 | MsG0380017282.01.T01:CDS |
| TTCGAATTCGAGCTTACAAA+GGG | 0.514547 | 3:+94453972 | None:intergenic |
| AGGTTATGGAGAAGTTCATC+AGG | 0.515436 | 3:-94455473 | MsG0380017282.01.T01:CDS |
| GTCCTTGATGTTACTTGTGA+AGG | 0.518407 | 3:-94453364 | MsG0380017282.01.T01:three_prime_UTR |
| AAAATTCAAATGAGGCAAGA+AGG | 0.523644 | 3:-94454560 | MsG0380017282.01.T01:CDS |
| TGCATACTCACTTGCTCAGA+AGG | 0.524622 | 3:-94454513 | MsG0380017282.01.T01:intron |
| CTCGAATTCGAAACCATGCT+CGG | 0.524649 | 3:-94453961 | MsG0380017282.01.T01:CDS |
| ACCAAGGCAAAGCTAAAATC+GGG | 0.526058 | 3:-94453708 | MsG0380017282.01.T01:CDS |
| TCGTACCGAAACTCAGAACT+TGG | 0.528015 | 3:+94453852 | None:intergenic |
| TCACAAGTGTTCCCTGACAT+TGG | 0.528516 | 3:+94453789 | None:intergenic |
| CCAAAACTCAGCAACACTCA+TGG | 0.532255 | 3:-94455681 | MsG0380017282.01.T01:exon |
| GGTTATGAGTGCAGGCAAGA+AGG | 0.532390 | 3:-94454930 | MsG0380017282.01.T01:intron |
| GTTATGAGTGCAGGCAAGAA+GGG | 0.535330 | 3:-94454929 | MsG0380017282.01.T01:intron |
| TTCATTAAGCATATTCTGCA+CGG | 0.537002 | 3:+94454747 | None:intergenic |
| CGTTGTTAGAGCTCAGCCTA+AGG | 0.538437 | 3:-94455345 | MsG0380017282.01.T01:CDS |
| TACCAAGAAGGCGCGGAAAG+TGG | 0.545045 | 3:+94455277 | None:intergenic |
| ACTTCACCTACCAACCCAAT+CGG | 0.545649 | 3:-94453547 | MsG0380017282.01.T01:CDS |
| CAATCTAGTCTCCCAAGGCT+TGG | 0.546403 | 3:+94454061 | None:intergenic |
| AATATGGGGAGGAGGCTTGG+CGG | 0.547719 | 3:+94453902 | None:intergenic |
| CACCACAAAGCAGCTTCTGA+AGG | 0.550489 | 3:-94455416 | MsG0380017282.01.T01:CDS |
| GTTTGTCCAATATGGGGAGG+AGG | 0.555375 | 3:+94453894 | None:intergenic |
| TTCGTCCAGATAATCTCTCC+AGG | 0.556575 | 3:+94453292 | None:intergenic |
| TTTGAGGGCATTGAAGGCAG+TGG | 0.558218 | 3:-94454905 | MsG0380017282.01.T01:CDS |
| GGAGATAACAGTTCATGGAC+GGG | 0.563029 | 3:-94455452 | MsG0380017282.01.T01:CDS |
| TCCTTGATGTTACTTGTGAA+GGG | 0.565990 | 3:-94453363 | MsG0380017282.01.T01:three_prime_UTR |
| TTATGTTTGAAGGTGAAGGA+GGG | 0.568504 | 3:-94455515 | MsG0380017282.01.T01:intron |
| ATGAGTTTCAATTTATGAAG+AGG | 0.569955 | 3:-94453641 | MsG0380017282.01.T01:CDS |
| CGAGATGAACAAAGCTAATG+GGG | 0.570107 | 3:-94454114 | MsG0380017282.01.T01:CDS |
| CAAAACTCAGCAACACTCAT+GGG | 0.571912 | 3:-94455680 | MsG0380017282.01.T01:exon |
| GAGCTCTTGTCCGATTGGGT+TGG | 0.575108 | 3:+94453537 | None:intergenic |
| AGTATTGGTAATACTCAACC+TGG | 0.575609 | 3:-94453310 | MsG0380017282.01.T01:three_prime_UTR |
| GAGTAAGAGCTCGTCGTGTG+AGG | 0.575741 | 3:-94454789 | MsG0380017282.01.T01:CDS |
| TCTTGTCCGATTGGGTTGGT+AGG | 0.578767 | 3:+94453541 | None:intergenic |
| AGGATAGTTGTAACAGCACT+AGG | 0.582943 | 3:-94453758 | MsG0380017282.01.T01:CDS |
| TCGTGTGAGGATGTCTATGG+AGG | 0.584361 | 3:-94454776 | MsG0380017282.01.T01:CDS |
| GATTGGGTTGGTAGGTGAAG+TGG | 0.587150 | 3:+94453549 | None:intergenic |
| CATCTCGTGATTCCGGAGAG+TGG | 0.591885 | 3:+94454130 | None:intergenic |
| GTGTGATAGCATAGGAACAT+TGG | 0.592155 | 3:-94454597 | MsG0380017282.01.T01:CDS |
| TCCCTTCACAAGTAACATCA+AGG | 0.592979 | 3:+94453362 | None:intergenic |
| AACCCAATCGGACAAGAGCT+CGG | 0.593120 | 3:-94453535 | MsG0380017282.01.T01:CDS |
| GAGGATTCAAGCACTTGTCA+GGG | 0.594722 | 3:-94454881 | MsG0380017282.01.T01:CDS |
| AGGAGATAACAGTTCATGGA+CGG | 0.598486 | 3:-94455453 | MsG0380017282.01.T01:CDS |
| TTTATGTTTGAAGGTGAAGG+AGG | 0.601205 | 3:-94455516 | MsG0380017282.01.T01:intron |
| ATGAACAATTATACAAATGG+AGG | 0.601507 | 3:+94453338 | None:intergenic |
| ACCACAAAGCAGCTTCTGAA+GGG | 0.605684 | 3:-94455415 | MsG0380017282.01.T01:CDS |
| AGGAGCTTTCAAAAGAGAGA+GGG | 0.607085 | 3:-94454540 | MsG0380017282.01.T01:CDS |
| TTTCGAATTCGAGCTTACAA+AGG | 0.611349 | 3:+94453971 | None:intergenic |
| GTGTAAGCTTCTGCAGCAGT+TGG | 0.611752 | 3:+94455383 | None:intergenic |
| AGTGCTGTTACAACTATCCT+CGG | 0.615531 | 3:+94453761 | None:intergenic |
| GAAGGGTGGTGTGATAGCAT+AGG | 0.616172 | 3:-94454605 | MsG0380017282.01.T01:CDS |
| AGAAGCTTACACTGCTGCAG+TGG | 0.619115 | 3:-94455372 | MsG0380017282.01.T01:CDS |
| ACAAGAGCTCGGTGAGACCA+TGG | 0.619435 | 3:-94453524 | MsG0380017282.01.T01:CDS |
| TCCATCAATCTAGTCTCCCA+AGG | 0.620091 | 3:+94454056 | None:intergenic |
| AGTGACATTGAGATGCATGC+AGG | 0.622180 | 3:-94454833 | MsG0380017282.01.T01:CDS |
| AAGGAGCTTTCAAAAGAGAG+AGG | 0.623020 | 3:-94454541 | MsG0380017282.01.T01:CDS |
| GGGCATTGAAGGCAGTGGTG+AGG | 0.626128 | 3:-94454900 | MsG0380017282.01.T01:CDS |
| CGAGTAGTTTGTCCAATATG+GGG | 0.631070 | 3:+94453888 | None:intergenic |
| ATTCCGGAGAGTGGAAAATG+AGG | 0.631071 | 3:+94454139 | None:intergenic |
| CGTGTGAGGATGTCTATGGA+GGG | 0.633588 | 3:-94454775 | MsG0380017282.01.T01:CDS |
| GATTCGCGAATTAGTGCTTG+AGG | 0.633784 | 3:+94454166 | None:intergenic |
| GAGTTGGTTGGAAAGATGGA+TGG | 0.634715 | 3:-94454087 | MsG0380017282.01.T01:CDS |
| TGTCAGGGAACACTTGTGAA+AGG | 0.634990 | 3:-94453785 | MsG0380017282.01.T01:CDS |
| AAATGTATAACAGAGCTCAA+AGG | 0.643845 | 3:-94453677 | MsG0380017282.01.T01:CDS |
| CATCAACAACTCCAATGTCA+GGG | 0.651193 | 3:-94453800 | MsG0380017282.01.T01:CDS |
| TTGTGAATCTGCAGGAAGGG+TGG | 0.652606 | 3:-94454619 | MsG0380017282.01.T01:intron |
| CTTAGGCTGAGCTCTAACAA+CGG | 0.677421 | 3:+94455346 | None:intergenic |
| TTGTCAGGGGTAGACAGGTG+AGG | 0.677688 | 3:-94454867 | MsG0380017282.01.T01:CDS |
| AATTGAATACCAAGAAGGCG+CGG | 0.680101 | 3:+94455270 | None:intergenic |
| GTAGTTTGTCCAATATGGGG+AGG | 0.680532 | 3:+94453891 | None:intergenic |
| AGGATTCAAGCACTTGTCAG+GGG | 0.684889 | 3:-94454880 | MsG0380017282.01.T01:CDS |
| AAAGGGAAATAGCAGCTGGG+TGG | 0.690200 | 3:-94453497 | MsG0380017282.01.T01:three_prime_UTR |
| GAACCTGACTCAATCAACCA+AGG | 0.696026 | 3:-94453724 | MsG0380017282.01.T01:CDS |
| AAAAGAACAATGTCACAACA+AGG | 0.709510 | 3:-94453929 | MsG0380017282.01.T01:CDS |
| GAGATGAACAAAGCTAATGG+GGG | 0.721370 | 3:-94454113 | MsG0380017282.01.T01:CDS |
| GAACACTTGTGAAAGGACCG+AGG | 0.744801 | 3:-94453778 | MsG0380017282.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTAAAAAAACATTAAAT+GGG | + | Chr3:94453816-94453835 | None:intergenic | 10.0% |
| !! | ATTAAAAAATAACAAATTTG+AGG | + | Chr3:94454501-94454520 | None:intergenic | 10.0% |
| !! | TAAACTAAAAAAACATTAAA+TGG | + | Chr3:94453817-94453836 | None:intergenic | 10.0% |
| !! | TTAAAAAATAACAAATTTGA+GGG | + | Chr3:94454500-94454519 | None:intergenic | 10.0% |
| !! | ACTAAATTGAACAATTTAAA+AGG | + | Chr3:94454533-94454552 | None:intergenic | 15.0% |
| !! | TCAAAATAAAATGAAAAACA+TGG | + | Chr3:94455697-94455716 | None:intergenic | 15.0% |
| !! | TTAAATCAAAAATTCAAATG+AGG | - | Chr3:94454362-94454381 | MsG0380017282.01.T01:intron | 15.0% |
| !!! | AAAAAAACAAACTTTTTTTG+TGG | + | Chr3:94453369-94453388 | None:intergenic | 15.0% |
| !!! | AAAAAACAAACTTTTTTTGT+GGG | + | Chr3:94453368-94453387 | None:intergenic | 15.0% |
| !!! | AATGTTTTTTTAGTTTAGAT+TGG | - | Chr3:94453820-94453839 | MsG0380017282.01.T01:CDS | 15.0% |
| !!! | ATAATTTGAAATTTCGTTAA+AGG | - | Chr3:94454586-94454605 | MsG0380017282.01.T01:CDS | 15.0% |
| !! | AAAAGGAAAGAAAAAGAAAA+AGG | + | Chr3:94454696-94454715 | None:intergenic | 20.0% |
| !! | AAAATAAATAGTCATCAAAG+AGG | + | Chr3:94453737-94453756 | None:intergenic | 20.0% |
| !! | CAAATGAACAATTATACAAA+TGG | + | Chr3:94455598-94455617 | None:intergenic | 20.0% |
| !!! | TAGTTTAGATTGGAAAATTT+TGG | - | Chr3:94453830-94453849 | MsG0380017282.01.T01:CDS | 20.0% |
| !!! | TTCAATGTATTTTAATGAGT+CGG | - | Chr3:94455508-94455527 | MsG0380017282.01.T01:intron | 20.0% |
| ! | AAGGATCTTTCTTTGTAAAA+AGG | + | Chr3:94454713-94454732 | None:intergenic | 25.0% |
| ! | AATTGTTCATTTGTGAGTAT+TGG | - | Chr3:94455605-94455624 | MsG0380017282.01.T01:intron | 25.0% |
| ! | ATGAACAATTATACAAATGG+AGG | + | Chr3:94455595-94455614 | None:intergenic | 25.0% |
| ! | ATGAGTTTCAATTTATGAAG+AGG | - | Chr3:94455289-94455308 | MsG0380017282.01.T01:CDS | 25.0% |
| ! | GAAAAAATTGAATACCAAGA+AGG | + | Chr3:94453668-94453687 | None:intergenic | 25.0% |
| ! | GTTTATTCATTCAAACATAG+TGG | - | Chr3:94454651-94454670 | MsG0380017282.01.T01:intron | 25.0% |
| ! | TAGTGTATTGAACTATTTGT+TGG | - | Chr3:94453949-94453968 | MsG0380017282.01.T01:CDS | 25.0% |
| ! | TATTAGTTCCTAAAGTTGTA+GGG | + | Chr3:94454627-94454646 | None:intergenic | 25.0% |
| ! | TGAGTTTCAATTTATGAAGA+GGG | - | Chr3:94455290-94455309 | MsG0380017282.01.T01:CDS | 25.0% |
| ! | TTATTAGTTCCTAAAGTTGT+AGG | + | Chr3:94454628-94454647 | None:intergenic | 25.0% |
| !! | TTGGACATTCATCTATTTTA+GGG | - | Chr3:94453849-94453868 | MsG0380017282.01.T01:CDS | 25.0% |
| !! | TTTGGACATTCATCTATTTT+AGG | - | Chr3:94453848-94453867 | MsG0380017282.01.T01:CDS | 25.0% |
| !! | TTTGTTTGGTTTATGTTTGA+AGG | - | Chr3:94453405-94453424 | MsG0380017282.01.T01:three_prime_UTR | 25.0% |
| !!! | ATTTTATTTTGTGAATCTGC+AGG | - | Chr3:94454303-94454322 | MsG0380017282.01.T01:intron | 25.0% |
| !!! | TTGAGTGTTCATATTTTTGT+AGG | - | Chr3:94455713-94455732 | MsG0380017282.01.T01:five_prime_UTR | 25.0% |
| AAAAGAACAATGTCACAACA+AGG | - | Chr3:94455001-94455020 | MsG0380017282.01.T01:intron | 30.0% | |
| AAAATTCAAATGAGGCAAGA+AGG | - | Chr3:94454370-94454389 | MsG0380017282.01.T01:intron | 30.0% | |
| AAATGTATAACAGAGCTCAA+AGG | - | Chr3:94455253-94455272 | MsG0380017282.01.T01:intron | 30.0% | |
| AAATTTGAGGGACTAATTGA+CGG | + | Chr3:94454488-94454507 | None:intergenic | 30.0% | |
| AGAGTAAAAAATGGAGGTTA+TGG | - | Chr3:94453443-94453462 | MsG0380017282.01.T01:three_prime_UTR | 30.0% | |
| AGGAAAGAAAAAGAAAAAGG+TGG | + | Chr3:94454693-94454712 | None:intergenic | 30.0% | |
| TGGACGAATTGTCAATTTAT+GGG | - | Chr3:94455653-94455672 | MsG0380017282.01.T01:CDS | 30.0% | |
| TGTGTTTGTAATGAATGTGA+GGG | - | Chr3:94453979-94453998 | MsG0380017282.01.T01:CDS | 30.0% | |
| TTCATTAAGCATATTCTGCA+CGG | + | Chr3:94454186-94454205 | None:intergenic | 30.0% | |
| ! | AAATGGGTCAAAGCATTAAT+CGG | - | Chr3:94453283-94453302 | MsG0380017282.01.T01:three_prime_UTR | 30.0% |
| ! | ATCATTCACTCAACTTTTCT+AGG | - | Chr3:94455358-94455377 | MsG0380017282.01.T01:CDS | 30.0% |
| ! | CAGCAAAATTGAACTTTTGA+AGG | - | Chr3:94454211-94454230 | MsG0380017282.01.T01:intron | 30.0% |
| ! | CTAACAAGTCTAAAATCCTT+AGG | + | Chr3:94453604-94453623 | None:intergenic | 30.0% |
| ! | GTATTGAACTATTTGTTGGA+AGG | - | Chr3:94453953-94453972 | MsG0380017282.01.T01:CDS | 30.0% |
| ! | GTCTCTGAATTTTCAAATCA+TGG | - | Chr3:94454563-94454582 | MsG0380017282.01.T01:CDS | 30.0% |
| !! | AAAACAAAAGCTTGAGTTGA+AGG | + | Chr3:94453693-94453712 | None:intergenic | 30.0% |
| !! | CTAAGGATTTTAGACTTGTT+AGG | - | Chr3:94453602-94453621 | MsG0380017282.01.T01:CDS | 30.0% |
| !! | GAGATACTACTTTGATTTTC+TGG | + | Chr3:94455766-94455785 | None:intergenic | 30.0% |
| !! | TTGTTGTTGTTGACTTTGTT+TGG | - | Chr3:94453391-94453410 | MsG0380017282.01.T01:three_prime_UTR | 30.0% |
| AACCAAGGCAAAGCTAAAAT+CGG | - | Chr3:94455221-94455240 | MsG0380017282.01.T01:intron | 35.0% | |
| AAGGGTTCTGCAAATTTCTT+TGG | + | Chr3:94454943-94454962 | None:intergenic | 35.0% | |
| ACATGTTGTTCATCTTTGTC+TGG | + | Chr3:94453319-94453338 | None:intergenic | 35.0% | |
| ACGAGATGAACAAAGCTAAT+GGG | - | Chr3:94454815-94454834 | MsG0380017282.01.T01:CDS | 35.0% | |
| AGGGTGGTAAGAGTAAAAAA+TGG | - | Chr3:94453434-94453453 | MsG0380017282.01.T01:three_prime_UTR | 35.0% | |
| CAACAAGATGTTGAACTTCT+TGG | + | Chr3:94455488-94455507 | None:intergenic | 35.0% | |
| CTGGACGAATTGTCAATTTA+TGG | - | Chr3:94455652-94455671 | MsG0380017282.01.T01:CDS | 35.0% | |
| CTGTGTTTGTAATGAATGTG+AGG | - | Chr3:94453978-94453997 | MsG0380017282.01.T01:CDS | 35.0% | |
| GCTGGAAATCTCAAAATGTA+AGG | + | Chr3:94454732-94454751 | None:intergenic | 35.0% | |
| GTGGTAAGAGTAAAAAATGG+AGG | - | Chr3:94453437-94453456 | MsG0380017282.01.T01:three_prime_UTR | 35.0% | |
| TGAGTCAGGTTCATGTAATT+TGG | + | Chr3:94455198-94455217 | None:intergenic | 35.0% | |
| TGGTTTATGTTTGAAGGTGA+AGG | - | Chr3:94453411-94453430 | MsG0380017282.01.T01:three_prime_UTR | 35.0% | |
| TTATGTTTGAAGGTGAAGGA+GGG | - | Chr3:94453415-94453434 | MsG0380017282.01.T01:three_prime_UTR | 35.0% | |
| TTCGAATTCGAGCTTACAAA+GGG | + | Chr3:94454961-94454980 | None:intergenic | 35.0% | |
| TTTATGTTTGAAGGTGAAGG+AGG | - | Chr3:94453414-94453433 | MsG0380017282.01.T01:three_prime_UTR | 35.0% | |
| TTTCGAATTCGAGCTTACAA+AGG | + | Chr3:94454962-94454981 | None:intergenic | 35.0% | |
| ! | AACGAGTAGTTTGTCCAATA+TGG | + | Chr3:94455047-94455066 | None:intergenic | 35.0% |
| ! | ACGAGTAGTTTGTCCAATAT+GGG | + | Chr3:94455046-94455065 | None:intergenic | 35.0% |
| ! | ATTTTGTGAATCTGCAGGAA+GGG | - | Chr3:94454308-94454327 | MsG0380017282.01.T01:intron | 35.0% |
| ! | TATTTTGTGAATCTGCAGGA+AGG | - | Chr3:94454307-94454326 | MsG0380017282.01.T01:intron | 35.0% |
| ! | TCCTTGATGTTACTTGTGAA+GGG | - | Chr3:94455567-94455586 | MsG0380017282.01.T01:intron | 35.0% |
| ! | TTAAGTTGCCCTACAACTTT+AGG | - | Chr3:94454616-94454635 | MsG0380017282.01.T01:intron | 35.0% |
| !! | AGTATTGGTAATACTCAACC+TGG | - | Chr3:94455620-94455639 | MsG0380017282.01.T01:CDS | 35.0% |
| !! | TAGACTTGTTAGGCAAGAAT+GGG | - | Chr3:94453612-94453631 | MsG0380017282.01.T01:CDS | 35.0% |
| !! | TTAGACTTGTTAGGCAAGAA+TGG | - | Chr3:94453611-94453630 | MsG0380017282.01.T01:CDS | 35.0% |
| AAGGAGCTTTCAAAAGAGAG+AGG | - | Chr3:94454389-94454408 | MsG0380017282.01.T01:intron | 40.0% | |
| AATTGAATACCAAGAAGGCG+CGG | + | Chr3:94453663-94453682 | None:intergenic | 40.0% | |
| ACATCAACAACTCCAATGTC+AGG | - | Chr3:94455129-94455148 | MsG0380017282.01.T01:intron | 40.0% | |
| ACCAAGGCAAAGCTAAAATC+GGG | - | Chr3:94455222-94455241 | MsG0380017282.01.T01:intron | 40.0% | |
| AGAGAGAGAAAGAGAGAATG+TGG | + | Chr3:94453219-94453238 | None:intergenic | 40.0% | |
| AGGAGATAACAGTTCATGGA+CGG | - | Chr3:94453477-94453496 | MsG0380017282.01.T01:three_prime_UTR | 40.0% | |
| AGGAGCTTTCAAAAGAGAGA+GGG | - | Chr3:94454390-94454409 | MsG0380017282.01.T01:intron | 40.0% | |
| AGGATAGTTGTAACAGCACT+AGG | - | Chr3:94455172-94455191 | MsG0380017282.01.T01:intron | 40.0% | |
| AGGTTATGGAGAAGTTCATC+AGG | - | Chr3:94453457-94453476 | MsG0380017282.01.T01:three_prime_UTR | 40.0% | |
| CAAAACTCAGCAACACTCAT+GGG | - | Chr3:94453250-94453269 | MsG0380017282.01.T01:three_prime_UTR | 40.0% | |
| CACGAGATGAACAAAGCTAA+TGG | - | Chr3:94454814-94454833 | MsG0380017282.01.T01:CDS | 40.0% | |
| CATCAACAACTCCAATGTCA+GGG | - | Chr3:94455130-94455149 | MsG0380017282.01.T01:intron | 40.0% | |
| CATCAGGAGATAACAGTTCA+TGG | - | Chr3:94453473-94453492 | MsG0380017282.01.T01:three_prime_UTR | 40.0% | |
| CGAGATGAACAAAGCTAATG+GGG | - | Chr3:94454816-94454835 | MsG0380017282.01.T01:CDS | 40.0% | |
| CTTTGTTCATCTCGTGATTC+CGG | + | Chr3:94454810-94454829 | None:intergenic | 40.0% | |
| GAAAAAGGGAAATAGCAGCT+GGG | - | Chr3:94455430-94455449 | MsG0380017282.01.T01:CDS | 40.0% | |
| GAGATGAACAAAGCTAATGG+GGG | - | Chr3:94454817-94454836 | MsG0380017282.01.T01:CDS | 40.0% | |
| GGTTCTGCAAATTTCTTTGG+AGG | + | Chr3:94454940-94454959 | None:intergenic | 40.0% | |
| GTGTGATAGCATAGGAACAT+TGG | - | Chr3:94454333-94454352 | MsG0380017282.01.T01:intron | 40.0% | |
| TCCCTTCACAAGTAACATCA+AGG | + | Chr3:94455571-94455590 | None:intergenic | 40.0% | |
| TGAAAAAGGGAAATAGCAGC+TGG | - | Chr3:94455429-94455448 | MsG0380017282.01.T01:CDS | 40.0% | |
| ! | AGTGCTGTTACAACTATCCT+CGG | + | Chr3:94455172-94455191 | None:intergenic | 40.0% |
| ! | CGAGTAGTTTGTCCAATATG+GGG | + | Chr3:94455045-94455064 | None:intergenic | 40.0% |
| ! | GTCCTTGATGTTACTTGTGA+AGG | - | Chr3:94455566-94455585 | MsG0380017282.01.T01:intron | 40.0% |
| ! | TCTCTTTTCAGTCCTGAGTA+AGG | - | Chr3:94454460-94454479 | MsG0380017282.01.T01:intron | 40.0% |
| ! | TCTGCAAATTTCTTTGGAGG+TGG | + | Chr3:94454937-94454956 | None:intergenic | 40.0% |
| ! | TTTGAGATTTCCAGCAATGC+AGG | - | Chr3:94454737-94454756 | MsG0380017282.01.T01:CDS | 40.0% |
| !! | CAAGTCCAAGTTCTGAGTTT+CGG | - | Chr3:94455073-94455092 | MsG0380017282.01.T01:intron | 40.0% |
| !! | GCTATTTCCCTTTTTCACCA+TGG | + | Chr3:94455426-94455445 | None:intergenic | 40.0% |
| !! | TGAACTTTTGAAGGAAGCAG+AGG | - | Chr3:94454220-94454239 | MsG0380017282.01.T01:intron | 40.0% |
| !!! | TGGGGTTTTTTCTAAGCTCT+CGG | + | Chr3:94454911-94454930 | None:intergenic | 40.0% |
| !!! | TTTTTGACTTTGACCGAGCA+TGG | + | Chr3:94454985-94455004 | None:intergenic | 40.0% |
| AATGTGAGGGTTATGAGTGC+AGG | - | Chr3:94453992-94454011 | MsG0380017282.01.T01:CDS | 45.0% | |
| ACCACAAAGCAGCTTCTGAA+GGG | - | Chr3:94453515-94453534 | MsG0380017282.01.T01:exon | 45.0% | |
| ACTTCACCTACCAACCCAAT+CGG | - | Chr3:94455383-94455402 | MsG0380017282.01.T01:CDS | 45.0% | |
| AGCTCAAAGGCAACAGTCAA+TGG | - | Chr3:94455266-94455285 | MsG0380017282.01.T01:intron | 45.0% | |
| AGGATTCAAGCACTTGTCAG+GGG | - | Chr3:94454050-94454069 | MsG0380017282.01.T01:CDS | 45.0% | |
| AGTGACATTGAGATGCATGC+AGG | - | Chr3:94454097-94454116 | MsG0380017282.01.T01:CDS | 45.0% | |
| ATTCCGGAGAGTGGAAAATG+AGG | + | Chr3:94454794-94454813 | None:intergenic | 45.0% | |
| CCAAAACTCAGCAACACTCA+TGG | - | Chr3:94453249-94453268 | MsG0380017282.01.T01:three_prime_UTR | 45.0% | |
| CTCAACCTGGAGAGATTATC+TGG | - | Chr3:94455633-94455652 | MsG0380017282.01.T01:CDS | 45.0% | |
| CTCGAATTCGAAACCATGCT+CGG | - | Chr3:94454969-94454988 | MsG0380017282.01.T01:intron | 45.0% | |
| GAACCTGACTCAATCAACCA+AGG | - | Chr3:94455206-94455225 | MsG0380017282.01.T01:intron | 45.0% | |
| GAGGATTCAAGCACTTGTCA+GGG | - | Chr3:94454049-94454068 | MsG0380017282.01.T01:CDS | 45.0% | |
| GATTCGCGAATTAGTGCTTG+AGG | + | Chr3:94454767-94454786 | None:intergenic | 45.0% | |
| GGAGATAACAGTTCATGGAC+GGG | - | Chr3:94453478-94453497 | MsG0380017282.01.T01:three_prime_UTR | 45.0% | |
| GGTGAGACCATGGTGAAAAA+GGG | - | Chr3:94455416-94455435 | MsG0380017282.01.T01:CDS | 45.0% | |
| GTTATGAGTGCAGGCAAGAA+GGG | - | Chr3:94454001-94454020 | MsG0380017282.01.T01:CDS | 45.0% | |
| TCACAAGTGTTCCCTGACAT+TGG | + | Chr3:94455144-94455163 | None:intergenic | 45.0% | |
| TCCATCAATCTAGTCTCCCA+AGG | + | Chr3:94454877-94454896 | None:intergenic | 45.0% | |
| TCGTACCGAAACTCAGAACT+TGG | + | Chr3:94455081-94455100 | None:intergenic | 45.0% | |
| TGAACAAAGCTAATGGGGGA+TGG | - | Chr3:94454821-94454840 | MsG0380017282.01.T01:CDS | 45.0% | |
| TGAGGATTCAAGCACTTGTC+AGG | - | Chr3:94454048-94454067 | MsG0380017282.01.T01:CDS | 45.0% | |
| TGCATACTCACTTGCTCAGA+AGG | - | Chr3:94454417-94454436 | MsG0380017282.01.T01:intron | 45.0% | |
| TGTCAGGGAACACTTGTGAA+AGG | - | Chr3:94455145-94455164 | MsG0380017282.01.T01:intron | 45.0% | |
| TTCGTCCAGATAATCTCTCC+AGG | + | Chr3:94455641-94455660 | None:intergenic | 45.0% | |
| TTGCCTTGGTTGATTGAGTC+AGG | + | Chr3:94455212-94455231 | None:intergenic | 45.0% | |
| ! | AATTTCTTTGGAGGTGGTGG+TGG | + | Chr3:94454931-94454950 | None:intergenic | 45.0% |
| ! | ACACCTCATTTTCCACTCTC+CGG | - | Chr3:94454788-94454807 | MsG0380017282.01.T01:CDS | 45.0% |
| ! | AGGGCTGCAGTTTTCTCTAA+CGG | - | Chr3:94455309-94455328 | MsG0380017282.01.T01:CDS | 45.0% |
| ! | ATTTCTTTGGAGGTGGTGGT+GGG | + | Chr3:94454930-94454949 | None:intergenic | 45.0% |
| ! | CATGGGTGCTTCTGGAAAAT+GGG | - | Chr3:94453267-94453286 | MsG0380017282.01.T01:three_prime_UTR | 45.0% |
| ! | CTTAGGCTGAGCTCTAACAA+CGG | + | Chr3:94453587-94453606 | None:intergenic | 45.0% |
| ! | GAGTTGGTTGGAAAGATGGA+TGG | - | Chr3:94454843-94454862 | MsG0380017282.01.T01:CDS | 45.0% |
| ! | GATGGAGTTGGTTGGAAAGA+TGG | - | Chr3:94454839-94454858 | MsG0380017282.01.T01:CDS | 45.0% |
| ! | GCAAATTTCTTTGGAGGTGG+TGG | + | Chr3:94454934-94454953 | None:intergenic | 45.0% |
| ! | GTAGTTTGTCCAATATGGGG+AGG | + | Chr3:94455042-94455061 | None:intergenic | 45.0% |
| ! | TATCTGTCGTGAGTTGACAG+TGG | - | Chr3:94454243-94454262 | MsG0380017282.01.T01:intron | 45.0% |
| ! | TCATGGGTGCTTCTGGAAAA+TGG | - | Chr3:94453266-94453285 | MsG0380017282.01.T01:three_prime_UTR | 45.0% |
| !! | CCATGAGTGTTGCTGAGTTT+TGG | + | Chr3:94453252-94453271 | None:intergenic | 45.0% |
| !!! | ACCCGATTTTAGCTTTGCCT+TGG | + | Chr3:94455226-94455245 | None:intergenic | 45.0% |
| AAAGGGAAATAGCAGCTGGG+TGG | - | Chr3:94455433-94455452 | MsG0380017282.01.T01:CDS | 50.0% | |
| AACCCAATCGGACAAGAGCT+CGG | - | Chr3:94455395-94455414 | MsG0380017282.01.T01:CDS | 50.0% | |
| AAGCTAATGGGGGATGGAGT+TGG | - | Chr3:94454827-94454846 | MsG0380017282.01.T01:CDS | 50.0% | |
| AGAAGCTTACACTGCTGCAG+TGG | - | Chr3:94453558-94453577 | MsG0380017282.01.T01:CDS | 50.0% | |
| CAATCTAGTCTCCCAAGGCT+TGG | + | Chr3:94454872-94454891 | None:intergenic | 50.0% | |
| CACCACAAAGCAGCTTCTGA+AGG | - | Chr3:94453514-94453533 | MsG0380017282.01.T01:exon | 50.0% | |
| CGCGAATTAGTGCTTGAGGT+TGG | + | Chr3:94454763-94454782 | None:intergenic | 50.0% | |
| CGGTGAGACCATGGTGAAAA+AGG | - | Chr3:94455415-94455434 | MsG0380017282.01.T01:CDS | 50.0% | |
| CGTGTGAGGATGTCTATGGA+GGG | - | Chr3:94454155-94454174 | MsG0380017282.01.T01:CDS | 50.0% | |
| CGTTGTTAGAGCTCAGCCTA+AGG | - | Chr3:94453585-94453604 | MsG0380017282.01.T01:CDS | 50.0% | |
| GAACACTTGTGAAAGGACCG+AGG | - | Chr3:94455152-94455171 | MsG0380017282.01.T01:intron | 50.0% | |
| GAAGGGTGGTGTGATAGCAT+AGG | - | Chr3:94454325-94454344 | MsG0380017282.01.T01:intron | 50.0% | |
| GCCTTGGGAGACTAGATTGA+TGG | - | Chr3:94454873-94454892 | MsG0380017282.01.T01:CDS | 50.0% | |
| GGTTATGAGTGCAGGCAAGA+AGG | - | Chr3:94454000-94454019 | MsG0380017282.01.T01:CDS | 50.0% | |
| GTGTAAGCTTCTGCAGCAGT+TGG | + | Chr3:94453550-94453569 | None:intergenic | 50.0% | |
| GTTTGTCCAATATGGGGAGG+AGG | + | Chr3:94455039-94455058 | None:intergenic | 50.0% | |
| TAATTGACGGCGCCTTACTC+AGG | + | Chr3:94454475-94454494 | None:intergenic | 50.0% | |
| TCGTCGTGTGAGGATGTCTA+TGG | - | Chr3:94454151-94454170 | MsG0380017282.01.T01:CDS | 50.0% | |
| TCGTGTGAGGATGTCTATGG+AGG | - | Chr3:94454154-94454173 | MsG0380017282.01.T01:CDS | 50.0% | |
| TGTTTGAAGGTGAAGGAGGG+TGG | - | Chr3:94453418-94453437 | MsG0380017282.01.T01:three_prime_UTR | 50.0% | |
| TTGTGAATCTGCAGGAAGGG+TGG | - | Chr3:94454311-94454330 | MsG0380017282.01.T01:intron | 50.0% | |
| ! | ACCCTTCAGAAGCTGCTTTG+TGG | + | Chr3:94453519-94453538 | None:intergenic | 50.0% |
| ! | CTTCAGAAGCTGCTTTGTGG+TGG | + | Chr3:94453516-94453535 | None:intergenic | 50.0% |
| ! | TAATGGGGGATGGAGTTGGT+TGG | - | Chr3:94454831-94454850 | MsG0380017282.01.T01:CDS | 50.0% |
| ! | TTTCTTTGGAGGTGGTGGTG+GGG | + | Chr3:94454929-94454948 | None:intergenic | 50.0% |
| !! | AAGGGCTTTGAGGGCATTGA+AGG | - | Chr3:94454019-94454038 | MsG0380017282.01.T01:CDS | 50.0% |
| !! | GATTGGGTTGGTAGGTGAAG+TGG | + | Chr3:94455384-94455403 | None:intergenic | 50.0% |
| !! | TCTTGTCCGATTGGGTTGGT+AGG | + | Chr3:94455392-94455411 | None:intergenic | 50.0% |
| !! | TTTGAGGGCATTGAAGGCAG+TGG | - | Chr3:94454025-94454044 | MsG0380017282.01.T01:CDS | 50.0% |
| AACCACTTTCCGCGCCTTCT+TGG | - | Chr3:94453651-94453670 | MsG0380017282.01.T01:CDS | 55.0% | |
| AATATGGGGAGGAGGCTTGG+CGG | + | Chr3:94455031-94455050 | None:intergenic | 55.0% | |
| AGCACTTGTCAGGGGTAGAC+AGG | - | Chr3:94454058-94454077 | MsG0380017282.01.T01:CDS | 55.0% | |
| ATGGATGGCAGCCAAGCCTT+GGG | - | Chr3:94454858-94454877 | MsG0380017282.01.T01:CDS | 55.0% | |
| CACCGAGCTCTTGTCCGATT+GGG | + | Chr3:94455400-94455419 | None:intergenic | 55.0% | |
| CATCTCGTGATTCCGGAGAG+TGG | + | Chr3:94454803-94454822 | None:intergenic | 55.0% | |
| GAGCTCTTGTCCGATTGGGT+TGG | + | Chr3:94455396-94455415 | None:intergenic | 55.0% | |
| GAGTAAGAGCTCGTCGTGTG+AGG | - | Chr3:94454141-94454160 | MsG0380017282.01.T01:CDS | 55.0% | |
| GCAACACTCATGGGTGCTTC+TGG | - | Chr3:94453259-94453278 | MsG0380017282.01.T01:three_prime_UTR | 55.0% | |
| TCACCGAGCTCTTGTCCGAT+TGG | + | Chr3:94455401-94455420 | None:intergenic | 55.0% | |
| TCCAATATGGGGAGGAGGCT+TGG | + | Chr3:94455034-94455053 | None:intergenic | 55.0% | |
| TGCAGGCAAGAAGGGCTTTG+AGG | - | Chr3:94454009-94454028 | MsG0380017282.01.T01:CDS | 55.0% | |
| TTGTCAGGGGTAGACAGGTG+AGG | - | Chr3:94454063-94454082 | MsG0380017282.01.T01:CDS | 55.0% | |
| ! | ACAAGAGCTCGGTGAGACCA+TGG | - | Chr3:94455406-94455425 | MsG0380017282.01.T01:CDS | 55.0% |
| ! | AGAAGGCGCGGAAAGTGGTT+TGG | + | Chr3:94453651-94453670 | None:intergenic | 55.0% |
| ! | GCAGGCAAGAAGGGCTTTGA+GGG | - | Chr3:94454010-94454029 | MsG0380017282.01.T01:CDS | 55.0% |
| ! | TACCAAGAAGGCGCGGAAAG+TGG | + | Chr3:94453656-94453675 | None:intergenic | 55.0% |
| !! | TTGAGGTTGGCCTGCATTGC+TGG | + | Chr3:94454750-94454769 | None:intergenic | 55.0% |
| GATGGATGGCAGCCAAGCCT+TGG | - | Chr3:94454857-94454876 | MsG0380017282.01.T01:CDS | 60.0% | |
| GCCAAGCCTCCTCCCCATAT+TGG | - | Chr3:94455030-94455049 | MsG0380017282.01.T01:intron | 60.0% | |
| !! | GGGCATTGAAGGCAGTGGTG+AGG | - | Chr3:94454030-94454049 | MsG0380017282.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 94453161 | 94455791 | 94453161 | ID=MsG0380017282.01;Name=MsG0380017282.01 |
| Chr3 | mRNA | 94453161 | 94455791 | 94453161 | ID=MsG0380017282.01.T01;Parent=MsG0380017282.01;Name=MsG0380017282.01.T01;_AED=0.47;_eAED=0.47;_QI=107|1|1|1|1|1|5|360|445 |
| Chr3 | exon | 94453161 | 94454201 | 94453161 | ID=MsG0380017282.01.T01:exon:1501;Parent=MsG0380017282.01.T01 |
| Chr3 | exon | 94454514 | 94454627 | 94454514 | ID=MsG0380017282.01.T01:exon:1500;Parent=MsG0380017282.01.T01 |
| Chr3 | exon | 94454711 | 94454938 | 94454711 | ID=MsG0380017282.01.T01:exon:1499;Parent=MsG0380017282.01.T01 |
| Chr3 | exon | 94455280 | 94455525 | 94455280 | ID=MsG0380017282.01.T01:exon:1498;Parent=MsG0380017282.01.T01 |
| Chr3 | exon | 94455616 | 94455791 | 94455616 | ID=MsG0380017282.01.T01:exon:1497;Parent=MsG0380017282.01.T01 |
| Chr3 | five_prime_UTR | 94455685 | 94455791 | 94455685 | ID=MsG0380017282.01.T01:five_prime_utr;Parent=MsG0380017282.01.T01 |
| Chr3 | CDS | 94455616 | 94455684 | 94455616 | ID=MsG0380017282.01.T01:cds;Parent=MsG0380017282.01.T01 |
| Chr3 | CDS | 94455280 | 94455525 | 94455280 | ID=MsG0380017282.01.T01:cds;Parent=MsG0380017282.01.T01 |
| Chr3 | CDS | 94454711 | 94454938 | 94454711 | ID=MsG0380017282.01.T01:cds;Parent=MsG0380017282.01.T01 |
| Chr3 | CDS | 94454514 | 94454627 | 94454514 | ID=MsG0380017282.01.T01:cds;Parent=MsG0380017282.01.T01 |
| Chr3 | CDS | 94453521 | 94454201 | 94453521 | ID=MsG0380017282.01.T01:cds;Parent=MsG0380017282.01.T01 |
| Chr3 | three_prime_UTR | 94453161 | 94453520 | 94453161 | ID=MsG0380017282.01.T01:three_prime_utr;Parent=MsG0380017282.01.T01 |
| Gene Sequence |
| Protein sequence |
