AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022709.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022709.01.T01 MTR_4g094378 79.683 694 16 6 1 625 153 790 0.0 1082
MsG0480022709.01.T01 MTR_1g007420 50.450 666 223 9 24 625 264 886 0.0 639
MsG0480022709.01.T01 MTR_3g110690 48.512 672 226 10 30 625 130 757 0.0 609
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022709.01.T01 AT1G09980 46.742 706 246 10 6 625 140 801 0.0 605
MsG0480022709.01.T01 AT1G09980 46.742 706 247 10 6 625 140 802 0.0 602
MsG0480022709.01.T01 AT1G09980 46.742 706 247 10 6 625 140 802 0.0 602
MsG0480022709.01.T01 AT1G58350 47.059 680 226 9 30 625 165 794 0.0 590
MsG0480022709.01.T01 AT1G58350 47.059 680 226 9 30 625 165 794 0.0 590
MsG0480022709.01.T01 AT1G58350 47.059 680 226 9 30 625 165 794 0.0 590
MsG0480022709.01.T01 AT1G58350 69.485 272 61 2 376 625 440 711 1.61e-127 392
MsG0480022709.01.T01 AT1G58350 33.770 305 127 6 30 271 165 457 3.68e-44 168

Find 129 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGAATTCTCTATTCAATTC+AGG 0.191230 4:-75724374 MsG0480022709.01.T01:CDS
CTTCAAGACATGTATATATT+TGG 0.191479 4:-75725723 MsG0480022709.01.T01:CDS
ATATCTTCTTGATCTGTCTT+TGG 0.225707 4:-75725469 MsG0480022709.01.T01:CDS
ACAGTATATTATTTCCAAAA+AGG 0.229956 4:+75727978 None:intergenic
AGGGAAATCATTTGGATTTA+CGG 0.261407 4:-75724815 MsG0480022709.01.T01:CDS
AAGTGATCTCTTTCCTAAAA+AGG 0.278922 4:-75724677 MsG0480022709.01.T01:CDS
CTCTATTCAATTCAGGGCTT+TGG 0.283617 4:-75724367 MsG0480022709.01.T01:CDS
CTTTGTCACCTTCAATTTGT+AGG 0.292641 4:-75725425 MsG0480022709.01.T01:CDS
TGTAATCCCAGAAGAGCTTT+AGG 0.305888 4:+75727795 None:intergenic
ACGCGTTCTACAATAATAAT+AGG 0.308080 4:+75725684 None:intergenic
AGCAGCTCATATAGAGTTCT+TGG 0.309109 4:-75723127 MsG0480022709.01.T01:CDS
TAAAATTCAGGGAAATCATT+TGG 0.309549 4:-75724823 MsG0480022709.01.T01:intron
TTGAATCAGATGATACAAAA+TGG 0.314689 4:-75726818 MsG0480022709.01.T01:CDS
CTTTGTTATCTAAACATCTC+TGG 0.315177 4:+75723066 None:intergenic
GTATACCTATGTGTCGATAT+CGG 0.316268 4:-75724423 MsG0480022709.01.T01:CDS
TTGAATTTCTGCGCAAATCC+TGG 0.325382 4:-75726163 MsG0480022709.01.T01:CDS
AATCACCTCAGCTGCCTGAT+AGG 0.328592 4:-75726749 MsG0480022709.01.T01:CDS
CGCATTATTGCAGTTTGAAT+AGG 0.328610 4:+75725879 None:intergenic
GGATTTGCAAACTACTATCT+TGG 0.330883 4:-75725404 MsG0480022709.01.T01:CDS
CATGCTCCTATGACTGCTAC+TGG 0.333893 4:-75728022 MsG0480022709.01.T01:CDS
AGATGATCATCCCAAGAAAA+AGG 0.335417 4:+75726567 None:intergenic
CATCCATCAACTGACCTTTA+CGG 0.338542 4:-75724315 MsG0480022709.01.T01:CDS
ATCTGGCGACTTCAGAGAAA+TGG 0.359053 4:-75724718 MsG0480022709.01.T01:CDS
GGTCAGAGGAAGTTCGGATT+TGG 0.373363 4:+75723226 None:intergenic
CTATCGGTAATCTCATTGTC+AGG 0.387190 4:-75724590 MsG0480022709.01.T01:CDS
GGAGAACTGAATGGTCAATA+TGG 0.393372 4:-75726130 MsG0480022709.01.T01:CDS
GTCGATATCGGGTCCACACT+TGG 0.395614 4:-75724411 MsG0480022709.01.T01:CDS
ATTGTTCACCATCAATACTT+TGG 0.404100 4:+75726769 None:intergenic
GCACTGACTTCTTCCCTATC+AGG 0.404605 4:+75726735 None:intergenic
CGAATCAGCTCTTATATCTC+TGG 0.407257 4:-75726521 MsG0480022709.01.T01:CDS
GACATTAGAAACTGTATCTC+GGG 0.408136 4:+75724762 None:intergenic
CGCGATGGTCAGAGGAAGTT+CGG 0.414981 4:+75723220 None:intergenic
CGAATTCTCTATTCAATTCA+GGG 0.417165 4:-75724373 MsG0480022709.01.T01:CDS
GTAATCCCAGAAGAGCTTTA+GGG 0.418437 4:+75727796 None:intergenic
AGTGGGAGTAGCCAGCAAAA+TGG 0.418914 4:-75725558 MsG0480022709.01.T01:CDS
ATGTCCTAAGCAATGGTTCC+AGG 0.419292 4:-75725596 MsG0480022709.01.T01:CDS
GTGGGAGTAGCCAGCAAAAT+GGG 0.420182 4:-75725557 MsG0480022709.01.T01:CDS
AATGAAGTTTGAATTCAAAC+TGG 0.428284 4:+75725641 None:intergenic
GATTTGCAAACTACTATCTT+GGG 0.433870 4:-75725403 MsG0480022709.01.T01:intron
ACTGTGCCCAGCAGCTTCTT+CGG 0.435625 4:-75723301 MsG0480022709.01.T01:CDS
AACTTCAACGCTTCTTCCTA+CGG 0.438744 4:-75723177 MsG0480022709.01.T01:CDS
GTATACAAGTATCTTAGATA+TGG 0.439686 4:+75724440 None:intergenic
TTGCAAATCCTACAAATTGA+AGG 0.443438 4:+75725417 None:intergenic
TTTGTTATCTAAACATCTCT+GGG 0.444284 4:+75723067 None:intergenic
ACTAAACTTGTTTGTGGACC+TGG 0.445595 4:+75725578 None:intergenic
TAATGCGTGCAGAACTTCAT+AGG 0.447317 4:-75725863 MsG0480022709.01.T01:CDS
GCACGTGTCCAAAGTATTGA+TGG 0.455150 4:-75726777 MsG0480022709.01.T01:CDS
TATACCTATGTGTCGATATC+GGG 0.465136 4:-75724422 MsG0480022709.01.T01:CDS
ATTGTCAGGGCAGCCTTAGC+AGG 0.466145 4:-75724576 MsG0480022709.01.T01:intron
GCAAATGAAGAGAAAACATC+TGG 0.466183 4:-75724735 MsG0480022709.01.T01:CDS
ATGAAAGTATTCTCAAGATC+AGG 0.468624 4:+75724287 None:intergenic
TTGGCTATTGAAGAAGTTCA+AGG 0.476659 4:-75724348 MsG0480022709.01.T01:CDS
GTCTGATTTACAAGGTTCAC+TGG 0.477160 4:-75727856 MsG0480022709.01.T01:CDS
ACTAACCCAGTAGCAGTCAT+AGG 0.488470 4:+75728016 None:intergenic
ACTCCCACTAAACTTGTTTG+TGG 0.495464 4:+75725572 None:intergenic
TGGACCTGGAACCATTGCTT+AGG 0.495670 4:+75725592 None:intergenic
CATCCGTAAAGGTCAGTTGA+TGG 0.496688 4:+75724312 None:intergenic
TTTCAGTCAAATCAATAGCT+TGG 0.497020 4:+75726847 None:intergenic
TGAATTTCTGCGCAAATCCT+GGG 0.498276 4:-75726162 MsG0480022709.01.T01:CDS
AGGTCCACAAACAAGTTTAG+TGG 0.498908 4:-75725576 MsG0480022709.01.T01:CDS
CTCATAAATAATACCTGCTA+AGG 0.499861 4:+75724563 None:intergenic
AGCTTCGTTGGTCATTCTAT+CGG 0.501317 4:-75724606 MsG0480022709.01.T01:CDS
TCTGGCGACTTCAGAGAAAT+GGG 0.501567 4:-75724717 MsG0480022709.01.T01:CDS
AGGAACTTAAACACACTTAT+CGG 0.501670 4:-75723153 MsG0480022709.01.T01:CDS
CGGGGTCTATTAAAAGCCAT+TGG 0.503415 4:+75724781 None:intergenic
GATATCAAGCTCAGCTTCGT+TGG 0.503921 4:-75724618 MsG0480022709.01.T01:CDS
GGTGACAAAGTAACAAGATA+AGG 0.504504 4:+75725438 None:intergenic
TTCTGAATCCCTACAGTCAC+TGG 0.505193 4:+75727170 None:intergenic
TGATGCTTTCCATGCTGTCA+TGG 0.505223 4:-75727751 MsG0480022709.01.T01:intron
ATCACCTCAGCTGCCTGATA+GGG 0.508140 4:-75726748 MsG0480022709.01.T01:CDS
ATGTATTTCTGAAATTCCAC+AGG 0.508977 4:-75726497 MsG0480022709.01.T01:intron
AATAATTCCAGAAAGCATGA+TGG 0.512151 4:-75724465 MsG0480022709.01.T01:intron
TTTCGATGCAGATCAACAAT+CGG 0.512442 4:-75725749 MsG0480022709.01.T01:intron
TTGCGCAGGTCTGATTTACA+AGG 0.512635 4:-75727864 MsG0480022709.01.T01:intron
AATTACGCTGAAGATTATGT+TGG 0.515085 4:-75727144 MsG0480022709.01.T01:CDS
TCAATACTTTGGACACGTGC+TGG 0.518051 4:+75726780 None:intergenic
ATTACGCTGAAGATTATGTT+GGG 0.519193 4:-75727143 MsG0480022709.01.T01:CDS
TACGGCTTGTTCGTAACCAA+TGG 0.520931 4:-75724797 MsG0480022709.01.T01:CDS
GCAAATCCTGGGCTGTTGAT+CGG 0.521937 4:-75726151 MsG0480022709.01.T01:CDS
GATGCTCATCAAAGCATTGA+TGG 0.522659 4:-75726922 MsG0480022709.01.T01:CDS
TCTATTCTAGCAGAATGATA+AGG 0.527610 4:+75723324 None:intergenic
GAATTGTACCAGTGACTGTA+GGG 0.527884 4:-75727178 MsG0480022709.01.T01:CDS
ACAGATGCTAAATAATTGCT+TGG 0.532785 4:-75723250 MsG0480022709.01.T01:CDS
TGACATTAGAAACTGTATCT+CGG 0.536231 4:+75724761 None:intergenic
CATGATTACGCGATGGTCAG+AGG 0.538432 4:+75723212 None:intergenic
TTCGATGCAGATCAACAATC+GGG 0.540738 4:-75725748 MsG0480022709.01.T01:intron
TCAACGCTTCTTCCTACGGC+AGG 0.541831 4:-75723173 MsG0480022709.01.T01:CDS
TTTCATCTATAATCTTTCCA+AGG 0.548074 4:-75724270 MsG0480022709.01.T01:intron
GGCGAGGCATATCACAAATG+AGG 0.549481 4:-75725842 MsG0480022709.01.T01:CDS
GAATTCAAACTTCATTTCTG+TGG 0.555232 4:-75725634 MsG0480022709.01.T01:CDS
AAAAGGTTGAACTGATTCCT+CGG 0.567378 4:+75726584 None:intergenic
TCGATATCGGGTCCACACTT+GGG 0.574688 4:-75724410 MsG0480022709.01.T01:CDS
TGAATTGTACCAGTGACTGT+AGG 0.582373 4:-75727179 MsG0480022709.01.T01:CDS
AGTTCTCCGATCAACAGCCC+AGG 0.586596 4:+75726145 None:intergenic
TGGAAAGCATCAAAGTGGAT+AGG 0.589707 4:+75727762 None:intergenic
TGGCTATTGAAGAAGTTCAA+GGG 0.589842 4:-75724347 MsG0480022709.01.T01:CDS
AATATGGATGGTGTACTCAA+AGG 0.598801 4:-75726114 MsG0480022709.01.T01:intron
AAGATCAGGATCATCCGTAA+AGG 0.598968 4:+75724301 None:intergenic
TGTGTTTAAGTTCCTGCCGT+AGG 0.599390 4:+75723161 None:intergenic
ATGCTCCTATGACTGCTACT+GGG 0.599526 4:-75728021 MsG0480022709.01.T01:CDS
GCAAGGCATGTCCTAAGCAA+TGG 0.600325 4:-75725603 MsG0480022709.01.T01:CDS
GATCTGAAAAGAATAAGCAC+AGG 0.602066 4:-75726876 MsG0480022709.01.T01:CDS
GGTCCACAAACAAGTTTAGT+GGG 0.604387 4:-75725575 MsG0480022709.01.T01:CDS
AAGAAGATATAAGAGACTGC+AGG 0.611304 4:+75725482 None:intergenic
AACTGAATGGTCAATATGGA+TGG 0.612659 4:-75726126 MsG0480022709.01.T01:CDS
TTGAATTCAAACTGGCAGAA+CGG 0.613557 4:+75725649 None:intergenic
AGCAATTATTTAGCATCTGT+AGG 0.614495 4:+75723253 None:intergenic
TCTTCCCTATCAGGCAGCTG+AGG 0.617695 4:+75726744 None:intergenic
GATACAGTTTCTAATGTCAG+AGG 0.619769 4:-75724757 MsG0480022709.01.T01:CDS
GCGAGGCATATCACAAATGA+GGG 0.621981 4:-75725841 MsG0480022709.01.T01:intron
ATACTTTGGACACGTGCTGG+TGG 0.624157 4:+75726783 None:intergenic
TAATCCCAGAAGAGCTTTAG+GGG 0.624736 4:+75727797 None:intergenic
TTGTATCAACCATGACAGCA+TGG 0.625771 4:+75727742 None:intergenic
ATAATAATAGGAACAAGCAA+AGG 0.629914 4:+75725696 None:intergenic
AGATTATGTTGGGTCAAACA+AGG 0.639267 4:-75727133 MsG0480022709.01.T01:intron
TATCGGTAATCTCATTGTCA+GGG 0.639335 4:-75724589 MsG0480022709.01.T01:CDS
CGTGCAGAACTTCATAGGCG+AGG 0.643599 4:-75725858 MsG0480022709.01.T01:CDS
TGGACCCGATATCGACACAT+AGG 0.653112 4:+75724418 None:intergenic
TAATATCAATTATCTAACCG+AGG 0.655534 4:-75726601 MsG0480022709.01.T01:CDS
TTTCTGTGGAGAATGATGCA+AGG 0.657311 4:-75725620 MsG0480022709.01.T01:CDS
ATCCCAGAAGAGCTTTAGGG+GGG 0.659435 4:+75727799 None:intergenic
CAGCATGGAAAGCATCAAAG+TGG 0.659782 4:+75727757 None:intergenic
AGTGACTGTAGGGATTCAGA+AGG 0.671188 4:-75727168 MsG0480022709.01.T01:CDS
ACATTAGAAACTGTATCTCG+GGG 0.679231 4:+75724763 None:intergenic
CGCAGCGCATGATTACGCGA+TGG 0.679459 4:+75723205 None:intergenic
AATCCCAGAAGAGCTTTAGG+GGG 0.680337 4:+75727798 None:intergenic
CTGTTGATCGGAGAACTGAA+TGG 0.680511 4:-75726139 MsG0480022709.01.T01:CDS
CTGTACATATAACCCAAGTG+TGG 0.683359 4:+75724398 None:intergenic
TAGGGAAGAAGTCAGTGCCG+TGG 0.704921 4:-75726730 MsG0480022709.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAACATAAATAAGTTA+TGG + Chr4:75723848-75723867 None:intergenic 10.0%
!! ACAAAAAAAAATATAAACAA+GGG + Chr4:75725720-75725739 None:intergenic 10.0%
!! ACAAAATAAAAATTAAAGTA+GGG - Chr4:75726583-75726602 MsG0480022709.01.T01:CDS 10.0%
!!! AATTTAAAATCAAATTTGAT+TGG + Chr4:75723762-75723781 None:intergenic 10.0%
!!! ATTTAAAATCAAATTTGATT+GGG + Chr4:75723761-75723780 None:intergenic 10.0%
!! AAATAGAGTTTAATATTGAT+AGG + Chr4:75727153-75727172 None:intergenic 15.0%
!! AAATGAAACATACAAAAAAA+TGG - Chr4:75723148-75723167 MsG0480022709.01.T01:CDS 15.0%
!! CACAAAAAAAAATATAAACA+AGG + Chr4:75725721-75725740 None:intergenic 15.0%
!! CACAAAATAAAAATTAAAGT+AGG - Chr4:75726582-75726601 MsG0480022709.01.T01:CDS 15.0%
!! GGTATAAAATTACAATTATT+AGG - Chr4:75727468-75727487 MsG0480022709.01.T01:intron 15.0%
!! TAAAAGAAAACTAAATTAGT+AGG - Chr4:75727436-75727455 MsG0480022709.01.T01:intron 15.0%
!!! ACATTATAATTTTTAATGCA+AGG - Chr4:75724790-75724809 MsG0480022709.01.T01:CDS 15.0%
!!! ACTTTAATTTTTATTTTGTG+TGG + Chr4:75726582-75726601 None:intergenic 15.0%
!!! ATTTTTAATTGACTAAACAT+AGG - Chr4:75727169-75727188 MsG0480022709.01.T01:CDS 15.0%
!!! CTATATTGATAATTTTTTCT+TGG - Chr4:75724748-75724767 MsG0480022709.01.T01:CDS 15.0%
!!! TTTTTAATTGACTAAACATA+GGG - Chr4:75727170-75727189 MsG0480022709.01.T01:CDS 15.0%
!! AAGATAATGAAGATAAAATG+AGG - Chr4:75723590-75723609 MsG0480022709.01.T01:intron 20.0%
!! ACAGTATATTATTTCCAAAA+AGG + Chr4:75723121-75723140 None:intergenic 20.0%
!! ACATAATTTGAAAGAAAGAA+AGG + Chr4:75726085-75726104 None:intergenic 20.0%
!! CAGTATATTATTTCCAAAAA+GGG + Chr4:75723120-75723139 None:intergenic 20.0%
!! CATATATTTAAACTCAAAAC+TGG + Chr4:75723449-75723468 None:intergenic 20.0%
!! TAAATACAATGATTGTGAAA+TGG - Chr4:75723194-75723213 MsG0480022709.01.T01:CDS 20.0%
!! TAACAATGAGACTAATAAAA+TGG + Chr4:75727202-75727221 None:intergenic 20.0%
!! TGAGATTGAAATAAAATGTT+GGG - Chr4:75726910-75726929 MsG0480022709.01.T01:CDS 20.0%
!! TTAGTGCTAAAAGTAATATT+AGG + Chr4:75725759-75725778 None:intergenic 20.0%
!! TTGAGATTGAAATAAAATGT+TGG - Chr4:75726909-75726928 MsG0480022709.01.T01:CDS 20.0%
!!! AGAACTATTTTAAAAGAACT+TGG - Chr4:75727327-75727346 MsG0480022709.01.T01:intron 20.0%
!!! AGGGTGATATTTATATTTTT+CGG + Chr4:75725928-75725947 None:intergenic 20.0%
!!! ATAAATATCACCCTTTTTAA+TGG - Chr4:75725934-75725953 MsG0480022709.01.T01:intron 20.0%
!!! ATGGCTATTTTACAATTATA+GGG + Chr4:75723829-75723848 None:intergenic 20.0%
!!! CTTTTAAAATAGTTCTTACT+AGG + Chr4:75727323-75727342 None:intergenic 20.0%
!!! TATGGCTATTTTACAATTAT+AGG + Chr4:75723830-75723849 None:intergenic 20.0%
!!! TCTTCATAATATCTTTAAAG+TGG - Chr4:75723503-75723522 MsG0480022709.01.T01:intron 20.0%
!!! TTCAAGTTTATTGGTATATT+TGG - Chr4:75726966-75726985 MsG0480022709.01.T01:intron 20.0%
!!! TTTTTTTTTTTTGTGTGTGA+AGG - Chr4:75724029-75724048 MsG0480022709.01.T01:intron 20.0%
! AAAAGAAAAAGACAGAAACA+AGG + Chr4:75726186-75726205 None:intergenic 25.0%
! AACTTGAATGTCCATTAAAA+AGG + Chr4:75725948-75725967 None:intergenic 25.0%
! AATATTCTGCATTCAAATGT+TGG - Chr4:75727371-75727390 MsG0480022709.01.T01:intron 25.0%
! AATGAAGTTTGAATTCAAAC+TGG + Chr4:75725458-75725477 None:intergenic 25.0%
! ACACATTCATGAAATAAATC+AGG + Chr4:75726120-75726139 None:intergenic 25.0%
! ACAGTTAAAACAATATAGTG+TGG + Chr4:75723880-75723899 None:intergenic 25.0%
! ACATTGACATTGAAAGAATT+AGG + Chr4:75724393-75724412 None:intergenic 25.0%
! ACTTGAATGTCCATTAAAAA+GGG + Chr4:75725947-75725966 None:intergenic 25.0%
! AGACATTCATTAACATTACA+CGG + Chr4:75727691-75727710 None:intergenic 25.0%
! ATAATAATAGGAACAAGCAA+AGG + Chr4:75725403-75725422 None:intergenic 25.0%
! ATAATTTCCACAGCATATAA+AGG + Chr4:75727296-75727315 None:intergenic 25.0%
! ATTTAGCGAAAGTTTATTGA+AGG + Chr4:75726016-75726035 None:intergenic 25.0%
! CTTCAAGACATGTATATATT+TGG - Chr4:75725373-75725392 MsG0480022709.01.T01:intron 25.0%
! GAAGAAGAAACAATGATTTA+TGG + Chr4:75724688-75724707 None:intergenic 25.0%
! GTATACAAGTATCTTAGATA+TGG + Chr4:75726659-75726678 None:intergenic 25.0%
! TAAAATTCAGGGAAATCATT+TGG - Chr4:75726273-75726292 MsG0480022709.01.T01:intron 25.0%
! TAATATCAATTATCTAACCG+AGG - Chr4:75724495-75724514 MsG0480022709.01.T01:intron 25.0%
! TTACACTATTTGAACATTGT+AGG + Chr4:75727667-75727686 None:intergenic 25.0%
! TTAGTCAAATCATCTATGAA+TGG + Chr4:75726237-75726256 None:intergenic 25.0%
! TTATGAAGATATCCTAACAA+AGG + Chr4:75723492-75723511 None:intergenic 25.0%
! TTGAATCAGATGATACAAAA+TGG - Chr4:75724278-75724297 MsG0480022709.01.T01:CDS 25.0%
! TTTAGCGAAAGTTTATTGAA+GGG + Chr4:75726015-75726034 None:intergenic 25.0%
! TTTCATCTATAATCTTTCCA+AGG - Chr4:75726826-75726845 MsG0480022709.01.T01:CDS 25.0%
!! ACTTAAATCTTTTCTTCAAC+AGG - Chr4:75724462-75724481 MsG0480022709.01.T01:intron 25.0%
!! ATTATCAAAGTAGAGTTGAT+TGG + Chr4:75723681-75723700 None:intergenic 25.0%
!! CTTGGTTTGAGATTTATATT+TGG - Chr4:75724766-75724785 MsG0480022709.01.T01:CDS 25.0%
!! CTTTATCCATTTTCCTTTTT+AGG + Chr4:75726435-75726454 None:intergenic 25.0%
!! TCAACTCTACTTTGATAATA+CGG - Chr4:75723682-75723701 MsG0480022709.01.T01:intron 25.0%
!! TTCTGTCTTTTTCTTTTTGA+CGG - Chr4:75726189-75726208 MsG0480022709.01.T01:intron 25.0%
!! TTTTTGAACGAAAAATCTTG+AGG + Chr4:75727623-75727642 None:intergenic 25.0%
!! TTTTTGCAAAGTTCATAATG+TGG - Chr4:75728001-75728020 MsG0480022709.01.T01:CDS 25.0%
!!! CATAATATCTTTAAAGTGGT+TGG - Chr4:75723507-75723526 MsG0480022709.01.T01:intron 25.0%
!!! GTTTTAACTGTTGAATGATA+TGG - Chr4:75723889-75723908 MsG0480022709.01.T01:intron 25.0%
AAGTGATCTCTTTCCTAAAA+AGG - Chr4:75726419-75726438 MsG0480022709.01.T01:intron 30.0%
AATTACGCTGAAGATTATGT+TGG - Chr4:75723952-75723971 MsG0480022709.01.T01:intron 30.0%
ACAGATGCTAAATAATTGCT+TGG - Chr4:75727846-75727865 MsG0480022709.01.T01:CDS 30.0%
ACGCGTTCTACAATAATAAT+AGG + Chr4:75725415-75725434 None:intergenic 30.0%
AGAAGTTCATTAATACAAGG+AGG - Chr4:75725070-75725089 MsG0480022709.01.T01:intron 30.0%
AGCAATTATTTAGCATCTGT+AGG + Chr4:75727846-75727865 None:intergenic 30.0%
AGGAAAATGGTATTATACCT+TGG + Chr4:75726846-75726865 None:intergenic 30.0%
AGGAACTTAAACACACTTAT+CGG - Chr4:75727943-75727962 MsG0480022709.01.T01:intron 30.0%
AGGGAAATCATTTGGATTTA+CGG - Chr4:75726281-75726300 MsG0480022709.01.T01:intron 30.0%
ATATATGCACAACAAAGTTG+AGG - Chr4:75725021-75725040 MsG0480022709.01.T01:intron 30.0%
ATATCTTCTTGATCTGTCTT+TGG - Chr4:75725627-75725646 MsG0480022709.01.T01:CDS 30.0%
ATGTTAATGAATGTCTGCTT+TGG - Chr4:75727695-75727714 MsG0480022709.01.T01:intron 30.0%
ATTACGCTGAAGATTATGTT+GGG - Chr4:75723953-75723972 MsG0480022709.01.T01:intron 30.0%
ATTGACTAAACATAGGGAAT+AGG - Chr4:75727176-75727195 MsG0480022709.01.T01:CDS 30.0%
ATTGTTCACCATCAATACTT+TGG + Chr4:75724330-75724349 None:intergenic 30.0%
CACAGAAGTTCATTAATACA+AGG - Chr4:75725067-75725086 MsG0480022709.01.T01:intron 30.0%
CGAATTCTCTATTCAATTCA+GGG - Chr4:75726723-75726742 MsG0480022709.01.T01:intron 30.0%
CTAATGATCAAACTCAAATC+AGG - Chr4:75724150-75724169 MsG0480022709.01.T01:intron 30.0%
CTCATAAATAATACCTGCTA+AGG + Chr4:75726536-75726555 None:intergenic 30.0%
CTCTTTCCTAAAAAGGAAAA+TGG - Chr4:75726426-75726445 MsG0480022709.01.T01:intron 30.0%
GAAGAATAAGTTGCAATAGT+GGG + Chr4:75724128-75724147 None:intergenic 30.0%
GAATGTTATCTTGTGAGAAA+AGG - Chr4:75724842-75724861 MsG0480022709.01.T01:intron 30.0%
GAATTCAAACTTCATTTCTG+TGG - Chr4:75725462-75725481 MsG0480022709.01.T01:CDS 30.0%
GATTTATGATCTTCCTGTTT+CGG - Chr4:75725302-75725321 MsG0480022709.01.T01:intron 30.0%
GATTTGCAAACTACTATCTT+GGG - Chr4:75725693-75725712 MsG0480022709.01.T01:CDS 30.0%
GTTTAATATTGATAGGCTGT+TGG + Chr4:75727146-75727165 None:intergenic 30.0%
TAAATTAGTAGGCATCTACA+AGG - Chr4:75727447-75727466 MsG0480022709.01.T01:intron 30.0%
TATAAGCTATAAGCTCAAAC+CGG - Chr4:75723628-75723647 MsG0480022709.01.T01:intron 30.0%
TATATGCACAACAAAGTTGA+GGG - Chr4:75725022-75725041 MsG0480022709.01.T01:intron 30.0%
TCGAATTCTCTATTCAATTC+AGG - Chr4:75726722-75726741 MsG0480022709.01.T01:intron 30.0%
TCTATTCTAGCAGAATGATA+AGG + Chr4:75727775-75727794 None:intergenic 30.0%
TGAAGAATAAGTTGCAATAG+TGG + Chr4:75724129-75724148 None:intergenic 30.0%
TGACATTAGAAACTGTATCT+CGG + Chr4:75726338-75726357 None:intergenic 30.0%
TTGCAAATCCTACAAATTGA+AGG + Chr4:75725682-75725701 None:intergenic 30.0%
TTGTTGTGCATATATTGATG+AGG + Chr4:75725016-75725035 None:intergenic 30.0%
TTTCAGTCAAATCAATAGCT+TGG + Chr4:75724252-75724271 None:intergenic 30.0%
! AAAGTAGAGTTGATTGGTAA+TGG + Chr4:75723675-75723694 None:intergenic 30.0%
! AATAATTCCAGAAAGCATGA+TGG - Chr4:75726631-75726650 MsG0480022709.01.T01:intron 30.0%
! AATCAGTTCAACCTTTTTCT+TGG - Chr4:75724518-75724537 MsG0480022709.01.T01:intron 30.0%
! AATGTTGGATCATTTTCTTG+AGG - Chr4:75727386-75727405 MsG0480022709.01.T01:intron 30.0%
! AGGTTTCTGTTCAAGTTTAT+TGG - Chr4:75726957-75726976 MsG0480022709.01.T01:intron 30.0%
! ATCAGTTCAACCTTTTTCTT+GGG - Chr4:75724519-75724538 MsG0480022709.01.T01:intron 30.0%
! ATGTTGGATCATTTTCTTGA+GGG - Chr4:75727387-75727406 MsG0480022709.01.T01:intron 30.0%
! CTAAAGGTATATCACATTTC+AGG - Chr4:75727738-75727757 MsG0480022709.01.T01:intron 30.0%
! GAACATTGAGTTTTTCTCAT+AGG + Chr4:75726048-75726067 None:intergenic 30.0%
! TCATTGTTATTACCATCTAC+AGG - Chr4:75727213-75727232 MsG0480022709.01.T01:intron 30.0%
!! AGAGTAGTTGTTTTGTTCAT+GGG - Chr4:75725571-75725590 MsG0480022709.01.T01:CDS 30.0%
!! ATGAAAGTATTCTCAAGATC+AGG + Chr4:75726812-75726831 None:intergenic 30.0%
!! ATGTATTTCTGAAATTCCAC+AGG - Chr4:75724599-75724618 MsG0480022709.01.T01:CDS 30.0%
!! CTTCGGATTTTTCTAAAAGA+GGG - Chr4:75727812-75727831 MsG0480022709.01.T01:CDS 30.0%
!! TATTTTTCGGATTCACAAGA+TGG + Chr4:75725915-75725934 None:intergenic 30.0%
!! TCTTCGGATTTTTCTAAAAG+AGG - Chr4:75727811-75727830 MsG0480022709.01.T01:CDS 30.0%
!! TCTTGAGGATTTTAAAAGAC+TGG + Chr4:75727608-75727627 None:intergenic 30.0%
!! TTATGGAAAAAAGTGCTACA+AGG + Chr4:75724671-75724690 None:intergenic 30.0%
!!! GTTTTAGAGCACTTATTGTT+AGG - Chr4:75725861-75725880 MsG0480022709.01.T01:CDS 30.0%
!!! GTTTTATTTTCCCTGAGTAA+AGG + Chr4:75724905-75724924 None:intergenic 30.0%
AAAGTGGTTGGCAAAATTAG+CGG - Chr4:75723519-75723538 MsG0480022709.01.T01:intron 35.0%
AACTGAATGGTCAATATGGA+TGG - Chr4:75724970-75724989 MsG0480022709.01.T01:intron 35.0%
AACTTGAACAGAAACCTTGA+TGG + Chr4:75726954-75726973 None:intergenic 35.0%
AAGAAGATATAAGAGACTGC+AGG + Chr4:75725617-75725636 None:intergenic 35.0%
AAGATGGTCGGTATTCATTT+AGG + Chr4:75725899-75725918 None:intergenic 35.0%
AATAAAATGTTGGGAAGCGA+CGG - Chr4:75726919-75726938 MsG0480022709.01.T01:CDS 35.0%
AATATGGATGGTGTACTCAA+AGG - Chr4:75724982-75725001 MsG0480022709.01.T01:intron 35.0%
ACATTAGAAACTGTATCTCG+GGG + Chr4:75726336-75726355 None:intergenic 35.0%
ACATTTATACATCCACACCT+AGG + Chr4:75725991-75726010 None:intergenic 35.0%
ACTCCTCATCACTAAAATTC+AGG - Chr4:75726261-75726280 MsG0480022709.01.T01:intron 35.0%
AGAAAAAGACAGAAACAAGG+TGG + Chr4:75726183-75726202 None:intergenic 35.0%
AGATGATCATCCCAAGAAAA+AGG + Chr4:75724532-75724551 None:intergenic 35.0%
AGATTATGTTGGGTCAAACA+AGG - Chr4:75723963-75723982 MsG0480022709.01.T01:intron 35.0%
AGGTATATCACATTTCAGGA+TGG - Chr4:75727742-75727761 MsG0480022709.01.T01:intron 35.0%
ATATGCACAACAAAGTTGAG+GGG - Chr4:75725023-75725042 MsG0480022709.01.T01:intron 35.0%
ATGAAATTGTCCTAAGCCTT+TGG + Chr4:75725785-75725804 None:intergenic 35.0%
ATGAACTTCTGTGTAAGCTA+TGG + Chr4:75725060-75725079 None:intergenic 35.0%
ATTGTTGCATCACCTTTGTT+AGG - Chr4:75723477-75723496 MsG0480022709.01.T01:intron 35.0%
CAATCCTATTCCTTTACTCA+GGG - Chr4:75724892-75724911 MsG0480022709.01.T01:intron 35.0%
CATATAAAGGAAGTTACCTG+AGG + Chr4:75727283-75727302 None:intergenic 35.0%
CATTGAAAGAATTAGGACCA+CGG + Chr4:75724386-75724405 None:intergenic 35.0%
CGCATTATTGCAGTTTGAAT+AGG + Chr4:75725220-75725239 None:intergenic 35.0%
CTCCTCATCACTAAAATTCA+GGG - Chr4:75726262-75726281 MsG0480022709.01.T01:intron 35.0%
CTTTGTCACCTTCAATTTGT+AGG - Chr4:75725671-75725690 MsG0480022709.01.T01:CDS 35.0%
GAAAACAAGGAAGAGAACAT+AGG + Chr4:75723798-75723817 None:intergenic 35.0%
GACATTAGAAACTGTATCTC+GGG + Chr4:75726337-75726356 None:intergenic 35.0%
GATACAGTTTCTAATGTCAG+AGG - Chr4:75726339-75726358 MsG0480022709.01.T01:intron 35.0%
GATCTGAAAAGAATAAGCAC+AGG - Chr4:75724220-75724239 MsG0480022709.01.T01:intron 35.0%
GATTGAGTCAAATGCTGTAA+AGG - Chr4:75723170-75723189 MsG0480022709.01.T01:CDS 35.0%
GCAAATGAAGAGAAAACATC+TGG - Chr4:75726361-75726380 MsG0480022709.01.T01:intron 35.0%
GGATTTGCAAACTACTATCT+TGG - Chr4:75725692-75725711 MsG0480022709.01.T01:CDS 35.0%
GGTGACAAAGTAACAAGATA+AGG + Chr4:75725661-75725680 None:intergenic 35.0%
GGTTTCTATTAGCAACATGA+AGG - Chr4:75724811-75724830 MsG0480022709.01.T01:CDS 35.0%
GTAACTTCCTTTATATGCTG+TGG - Chr4:75727286-75727305 MsG0480022709.01.T01:intron 35.0%
GTTATCACACAATTCACAGA+AGG - Chr4:75723403-75723422 MsG0480022709.01.T01:intron 35.0%
TACTATCCACTATAAGCTAG+CGG - Chr4:75723709-75723728 MsG0480022709.01.T01:intron 35.0%
TAGGGAGTAGATAGAAAACA+AGG + Chr4:75723811-75723830 None:intergenic 35.0%
TATCGGTAATCTCATTGTCA+GGG - Chr4:75726507-75726526 MsG0480022709.01.T01:CDS 35.0%
TATTGACATCGTGACTTCTT+AGG - Chr4:75727502-75727521 MsG0480022709.01.T01:intron 35.0%
TCAATCCTATTCCTTTACTC+AGG - Chr4:75724891-75724910 MsG0480022709.01.T01:intron 35.0%
TGGAAAACAAGACAGAAACA+AGG + Chr4:75726217-75726236 None:intergenic 35.0%
TGGCTATTGAAGAAGTTCAA+GGG - Chr4:75726749-75726768 MsG0480022709.01.T01:CDS 35.0%
TTGAATTCAAACTGGCAGAA+CGG + Chr4:75725450-75725469 None:intergenic 35.0%
TTGGCTATTGAAGAAGTTCA+AGG - Chr4:75726748-75726767 MsG0480022709.01.T01:CDS 35.0%
TTTCGATGCAGATCAACAAT+CGG - Chr4:75725347-75725366 MsG0480022709.01.T01:intron 35.0%
! AAAAGGTTGAACTGATTCCT+CGG + Chr4:75724515-75724534 None:intergenic 35.0%
! GTATACCTATGTGTCGATAT+CGG - Chr4:75726673-75726692 MsG0480022709.01.T01:intron 35.0%
! TATACCTATGTGTCGATATC+GGG - Chr4:75726674-75726693 MsG0480022709.01.T01:intron 35.0%
! TATGATTGGTTGTGATTTGC+TGG - Chr4:75727101-75727120 MsG0480022709.01.T01:intron 35.0%
! TGCTTCAATGTGATCTGTTT+TGG - Chr4:75726151-75726170 MsG0480022709.01.T01:CDS 35.0%
! TTCTTTTCAGATCTTCAAGC+AGG + Chr4:75724213-75724232 None:intergenic 35.0%
! TTGTTTTCAGCACTAGGAAA+AGG + Chr4:75726874-75726893 None:intergenic 35.0%
! TTTCCTAGTGCTGAAAACAA+TGG - Chr4:75726874-75726893 MsG0480022709.01.T01:CDS 35.0%
! TTTTCCCTGAGTAAAGGAAT+AGG + Chr4:75724899-75724918 None:intergenic 35.0%
!! ACTTCAGAGAAATGGGTTTT+CGG - Chr4:75726386-75726405 MsG0480022709.01.T01:intron 35.0%
!! GAGAGTAGTTGTTTTGTTCA+TGG - Chr4:75725570-75725589 MsG0480022709.01.T01:CDS 35.0%
!! GCTGAAAACAATGGACTTTT+TGG - Chr4:75726883-75726902 MsG0480022709.01.T01:CDS 35.0%
!! TTCCCTGAATTTTAGTGATG+AGG + Chr4:75726267-75726286 None:intergenic 35.0%
!! TTGTTTTGTTCATGGGTTTC+AGG - Chr4:75725578-75725597 MsG0480022709.01.T01:CDS 35.0%
AAAAATCCGAAGAAGCTGCT+GGG + Chr4:75727804-75727823 None:intergenic 40.0%
AAATTGTCCTAAGCCTTTGG+TGG + Chr4:75725782-75725801 None:intergenic 40.0%
AACATAGGTGAACAAACCTG+TGG + Chr4:75724618-75724637 None:intergenic 40.0%
AACTTCAACGCTTCTTCCTA+CGG - Chr4:75727919-75727938 MsG0480022709.01.T01:intron 40.0%
AAGATCAGGATCATCCGTAA+AGG + Chr4:75726798-75726817 None:intergenic 40.0%
AGAAGACGCTGGAAAACTTT+CGG - Chr4:75727236-75727255 MsG0480022709.01.T01:intron 40.0%
AGCAGCTCATATAGAGTTCT+TGG - Chr4:75727969-75727988 MsG0480022709.01.T01:intron 40.0%
AGCTTCGTTGGTCATTCTAT+CGG - Chr4:75726490-75726509 MsG0480022709.01.T01:intron 40.0%
AGGTCCACAAACAAGTTTAG+TGG - Chr4:75725520-75725539 MsG0480022709.01.T01:CDS 40.0%
ATAAAATGTTGGGAAGCGAC+GGG - Chr4:75726920-75726939 MsG0480022709.01.T01:CDS 40.0%
CATCCATCAACTGACCTTTA+CGG - Chr4:75726781-75726800 MsG0480022709.01.T01:CDS 40.0%
CGAATCAGCTCTTATATCTC+TGG - Chr4:75724575-75724594 MsG0480022709.01.T01:intron 40.0%
CTATCGGTAATCTCATTGTC+AGG - Chr4:75726506-75726525 MsG0480022709.01.T01:CDS 40.0%
CTCTATTCAATTCAGGGCTT+TGG - Chr4:75726729-75726748 MsG0480022709.01.T01:intron 40.0%
CTGTACATATAACCCAAGTG+TGG + Chr4:75726701-75726720 None:intergenic 40.0%
GAATTGTACCAGTGACTGTA+GGG - Chr4:75723918-75723937 MsG0480022709.01.T01:intron 40.0%
GGAAAAGGAGACAAGGAAAA+TGG + Chr4:75726859-75726878 None:intergenic 40.0%
GGAGAACTGAATGGTCAATA+TGG - Chr4:75724966-75724985 MsG0480022709.01.T01:intron 40.0%
GGTCCACAAACAAGTTTAGT+GGG - Chr4:75725521-75725540 MsG0480022709.01.T01:CDS 40.0%
GTAATCCCAGAAGAGCTTTA+GGG + Chr4:75723303-75723322 None:intergenic 40.0%
GTCTGATTTACAAGGTTCAC+TGG - Chr4:75723240-75723259 MsG0480022709.01.T01:CDS 40.0%
GTTAAAGTCACGCGTATGAT+TGG - Chr4:75727087-75727106 MsG0480022709.01.T01:intron 40.0%
TAATGCGTGCAGAACTTCAT+AGG - Chr4:75725233-75725252 MsG0480022709.01.T01:intron 40.0%
TGAATTGTACCAGTGACTGT+AGG - Chr4:75723917-75723936 MsG0480022709.01.T01:intron 40.0%
TGAATTTCTGCGCAAATCCT+GGG - Chr4:75724934-75724953 MsG0480022709.01.T01:intron 40.0%
TGTAATCCCAGAAGAGCTTT+AGG + Chr4:75723304-75723323 None:intergenic 40.0%
TTCGATGCAGATCAACAATC+GGG - Chr4:75725348-75725367 MsG0480022709.01.T01:intron 40.0%
TTGAATTTCTGCGCAAATCC+TGG - Chr4:75724933-75724952 MsG0480022709.01.T01:intron 40.0%
TTGCATTACATTCATTGCGC+AGG - Chr4:75723218-75723237 MsG0480022709.01.T01:CDS 40.0%
TTGTATCAACCATGACAGCA+TGG + Chr4:75723357-75723376 None:intergenic 40.0%
TTTCGGATTCACAAGATGGT+CGG + Chr4:75725911-75725930 None:intergenic 40.0%
TTTCTGTGGAGAATGATGCA+AGG - Chr4:75725476-75725495 MsG0480022709.01.T01:CDS 40.0%
! ACTAAACTTGTTTGTGGACC+TGG + Chr4:75725521-75725540 None:intergenic 40.0%
! ACTCCCACTAAACTTGTTTG+TGG + Chr4:75725527-75725546 None:intergenic 40.0%
! AGTCCATTGTTTTCAGCACT+AGG + Chr4:75726880-75726899 None:intergenic 40.0%
! ATTCTCTCACGAGCTTTTAC+CGG + Chr4:75723650-75723669 None:intergenic 40.0%
! CATGCTTCTCTTTCCCTTTT+TGG - Chr4:75723104-75723123 MsG0480022709.01.T01:CDS 40.0%
! CTTTTAGCACTAACCACCAA+AGG - Chr4:75725766-75725785 MsG0480022709.01.T01:intron 40.0%
! GTTTCTTTTATCCTCACCTC+AGG - Chr4:75727264-75727283 MsG0480022709.01.T01:intron 40.0%
! TAATCCCAGAAGAGCTTTAG+GGG + Chr4:75723302-75723321 None:intergenic 40.0%
! TCAAAACATGCCCATTTTGC+TGG + Chr4:75725552-75725571 None:intergenic 40.0%
!! ACAATTCACAGAAGGTACCA+AGG - Chr4:75723411-75723430 MsG0480022709.01.T01:intron 40.0%
!! GATGCTCATCAAAGCATTGA+TGG - Chr4:75724174-75724193 MsG0480022709.01.T01:intron 40.0%
!! TGGAAAGCATCAAAGTGGAT+AGG + Chr4:75723337-75723356 None:intergenic 40.0%
AAAGGAAGTTACCTGAGGTG+AGG + Chr4:75727278-75727297 None:intergenic 45.0%
AAATTCCAGTCAGCCGAAAC+AGG + Chr4:75725318-75725337 None:intergenic 45.0%
ACTAACCCAGTAGCAGTCAT+AGG + Chr4:75723083-75723102 None:intergenic 45.0%
AGCACTAGGAAAAGGAGACA+AGG + Chr4:75726866-75726885 None:intergenic 45.0%
AGTGACTGTAGGGATTCAGA+AGG - Chr4:75723928-75723947 MsG0480022709.01.T01:intron 45.0%
ATCTGGCGACTTCAGAGAAA+TGG - Chr4:75726378-75726397 MsG0480022709.01.T01:intron 45.0%
ATGCTCCTATGACTGCTACT+GGG - Chr4:75723075-75723094 MsG0480022709.01.T01:CDS 45.0%
ATGTCCTAAGCAATGGTTCC+AGG - Chr4:75725500-75725519 MsG0480022709.01.T01:CDS 45.0%
CATCCGTAAAGGTCAGTTGA+TGG + Chr4:75726787-75726806 None:intergenic 45.0%
CGGGGTCTATTAAAAGCCAT+TGG + Chr4:75726318-75726337 None:intergenic 45.0%
CTGAAATGTGATCCTAGGTG+TGG - Chr4:75725976-75725995 MsG0480022709.01.T01:intron 45.0%
CTGTTGATCGGAGAACTGAA+TGG - Chr4:75724957-75724976 MsG0480022709.01.T01:intron 45.0%
GAAAAATCCGAAGAAGCTGC+TGG + Chr4:75727805-75727824 None:intergenic 45.0%
GATATCAAGCTCAGCTTCGT+TGG - Chr4:75726478-75726497 MsG0480022709.01.T01:intron 45.0%
GATTGGGTTTAGACTCCGTT+TGG + Chr4:75723745-75723764 None:intergenic 45.0%
GCGAGGCATATCACAAATGA+GGG - Chr4:75725255-75725274 MsG0480022709.01.T01:intron 45.0%
TAAAATGTTGGGAAGCGACG+GGG - Chr4:75726921-75726940 MsG0480022709.01.T01:CDS 45.0%
TATGGCTCCATCATGCTTTC+TGG + Chr4:75726641-75726660 None:intergenic 45.0%
TCAATACTTTGGACACGTGC+TGG + Chr4:75724319-75724338 None:intergenic 45.0%
TCCACTATAAGCTAGCGGTT+TGG - Chr4:75723714-75723733 MsG0480022709.01.T01:intron 45.0%
TCTGGCGACTTCAGAGAAAT+GGG - Chr4:75726379-75726398 MsG0480022709.01.T01:intron 45.0%
TGATGCTTTCCATGCTGTCA+TGG - Chr4:75723345-75723364 MsG0480022709.01.T01:intron 45.0%
TTCTGAATCCCTACAGTCAC+TGG + Chr4:75723929-75723948 None:intergenic 45.0%
TTGCGCAGGTCTGATTTACA+AGG - Chr4:75723232-75723251 MsG0480022709.01.T01:CDS 45.0%
! TACGGCTTGTTCGTAACCAA+TGG - Chr4:75726299-75726318 MsG0480022709.01.T01:intron 45.0%
! TGTGTTTAAGTTCCTGCCGT+AGG + Chr4:75727938-75727957 None:intergenic 45.0%
!! AATCCCAGAAGAGCTTTAGG+GGG + Chr4:75723301-75723320 None:intergenic 45.0%
!! CAGCATGGAAAGCATCAAAG+TGG + Chr4:75723342-75723361 None:intergenic 45.0%
!! CAGCTCTGAAATGTGATCCT+AGG - Chr4:75725971-75725990 MsG0480022709.01.T01:intron 45.0%
!! GCACGTGTCCAAAGTATTGA+TGG - Chr4:75724319-75724338 MsG0480022709.01.T01:CDS 45.0%
!! TTAAATAATTATTTAAACAT+AGG + Chr4:75724633-75724652 None:intergenic 5.0%
!!! ATTTTATTTTTAATTTCTAA+AGG - Chr4:75727722-75727741 MsG0480022709.01.T01:intron 5.0%
AATCACCTCAGCTGCCTGAT+AGG - Chr4:75724347-75724366 MsG0480022709.01.T01:CDS 50.0%
AATCCCCCCTAAAGCTCTTC+TGG - Chr4:75723294-75723313 MsG0480022709.01.T01:CDS 50.0%
AGTGGGAGTAGCCAGCAAAA+TGG - Chr4:75725538-75725557 MsG0480022709.01.T01:CDS 50.0%
ATACTTTGGACACGTGCTGG+TGG + Chr4:75724316-75724335 None:intergenic 50.0%
ATCACCTCAGCTGCCTGATA+GGG - Chr4:75724348-75724367 MsG0480022709.01.T01:CDS 50.0%
ATCCCCCCTAAAGCTCTTCT+GGG - Chr4:75723295-75723314 MsG0480022709.01.T01:CDS 50.0%
ATCTTCCTGTTTCGGCTGAC+TGG - Chr4:75725310-75725329 MsG0480022709.01.T01:intron 50.0%
CATGATTACGCGATGGTCAG+AGG + Chr4:75727887-75727906 None:intergenic 50.0%
CATGCTCCTATGACTGCTAC+TGG - Chr4:75723074-75723093 MsG0480022709.01.T01:CDS 50.0%
GCAAATCCTGGGCTGTTGAT+CGG - Chr4:75724945-75724964 MsG0480022709.01.T01:intron 50.0%
GCAAGGCATGTCCTAAGCAA+TGG - Chr4:75725493-75725512 MsG0480022709.01.T01:CDS 50.0%
GCACTAACCACCAAAGGCTT+AGG - Chr4:75725772-75725791 MsG0480022709.01.T01:intron 50.0%
GGCGAGGCATATCACAAATG+AGG - Chr4:75725254-75725273 MsG0480022709.01.T01:intron 50.0%
GGTCAGAGGAAGTTCGGATT+TGG + Chr4:75727873-75727892 None:intergenic 50.0%
GGTTTAGACTCCGTTTGGCA+AGG + Chr4:75723740-75723759 None:intergenic 50.0%
GTGGGAGTAGCCAGCAAAAT+GGG - Chr4:75725539-75725558 MsG0480022709.01.T01:CDS 50.0%
TCGATATCGGGTCCACACTT+GGG - Chr4:75726686-75726705 MsG0480022709.01.T01:intron 50.0%
TGGACCCGATATCGACACAT+AGG + Chr4:75726681-75726700 None:intergenic 50.0%
TGGACCTGGAACCATTGCTT+AGG + Chr4:75725507-75725526 None:intergenic 50.0%
! ACTGGAGCTCTGACAAACCT+TGG + Chr4:75723431-75723450 None:intergenic 50.0%
! GCCAAACCGCTAGCTTATAG+TGG + Chr4:75723718-75723737 None:intergenic 50.0%
!! AATGGGTTTTCGGCTTGCTC+AGG - Chr4:75726396-75726415 MsG0480022709.01.T01:intron 50.0%
!! ATCCCAGAAGAGCTTTAGGG+GGG + Chr4:75723300-75723319 None:intergenic 50.0%
!! GCACTGACTTCTTCCCTATC+AGG + Chr4:75724364-75724383 None:intergenic 50.0%
ACTGTGCCCAGCAGCTTCTT+CGG - Chr4:75727795-75727814 MsG0480022709.01.T01:CDS 55.0%
AGTTCTCCGATCAACAGCCC+AGG + Chr4:75724954-75724973 None:intergenic 55.0%
ATTGTCAGGGCAGCCTTAGC+AGG - Chr4:75726520-75726539 MsG0480022709.01.T01:CDS 55.0%
CCAGCGTCTTCTCCTGTAGA+TGG + Chr4:75727228-75727247 None:intergenic 55.0%
CCATCTACAGGAGAAGACGC+TGG - Chr4:75727225-75727244 MsG0480022709.01.T01:intron 55.0%
CGCGATGGTCAGAGGAAGTT+CGG + Chr4:75727879-75727898 None:intergenic 55.0%
CGTGCAGAACTTCATAGGCG+AGG - Chr4:75725238-75725257 MsG0480022709.01.T01:intron 55.0%
GACGGGGTTGTCAACCATCA+AGG - Chr4:75726937-75726956 MsG0480022709.01.T01:intron 55.0%
GTCGATATCGGGTCCACACT+TGG - Chr4:75726685-75726704 MsG0480022709.01.T01:intron 55.0%
TAGGGAAGAAGTCAGTGCCG+TGG - Chr4:75724366-75724385 MsG0480022709.01.T01:CDS 55.0%
TCAACGCTTCTTCCTACGGC+AGG - Chr4:75727923-75727942 MsG0480022709.01.T01:intron 55.0%
TCTTCCCTATCAGGCAGCTG+AGG + Chr4:75724355-75724374 None:intergenic 55.0%
!! AGCGGTTTGGCCTTGCCAAA+CGG - Chr4:75723727-75723746 MsG0480022709.01.T01:intron 55.0%
CGCAGCGCATGATTACGCGA+TGG + Chr4:75727894-75727913 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 75723071 75728047 75723071 ID=MsG0480022709.01;Name=MsG0480022709.01
Chr4 mRNA 75723071 75728047 75723071 ID=MsG0480022709.01.T01;Parent=MsG0480022709.01;Name=MsG0480022709.01.T01;_AED=0.42;_eAED=0.44;_QI=0|0.08|0|1|0.66|0.53|13|0|625
Chr4 exon 75727980 75728047 75727980 ID=MsG0480022709.01.T01:exon:3285;Parent=MsG0480022709.01.T01
Chr4 exon 75727752 75727878 75727752 ID=MsG0480022709.01.T01:exon:3284;Parent=MsG0480022709.01.T01
Chr4 exon 75727134 75727202 75727134 ID=MsG0480022709.01.T01:exon:3283;Parent=MsG0480022709.01.T01
Chr4 exon 75726731 75726946 75726731 ID=MsG0480022709.01.T01:exon:3282;Parent=MsG0480022709.01.T01
Chr4 exon 75726498 75726634 75726498 ID=MsG0480022709.01.T01:exon:3281;Parent=MsG0480022709.01.T01
Chr4 exon 75726115 75726205 75726115 ID=MsG0480022709.01.T01:exon:3280;Parent=MsG0480022709.01.T01
Chr4 exon 75725842 75725901 75725842 ID=MsG0480022709.01.T01:exon:3279;Parent=MsG0480022709.01.T01
Chr4 exon 75725404 75725760 75725404 ID=MsG0480022709.01.T01:exon:3278;Parent=MsG0480022709.01.T01
Chr4 exon 75724577 75724835 75724577 ID=MsG0480022709.01.T01:exon:3277;Parent=MsG0480022709.01.T01
Chr4 exon 75724271 75724476 75724271 ID=MsG0480022709.01.T01:exon:3276;Parent=MsG0480022709.01.T01
Chr4 exon 75723071 75723358 75723071 ID=MsG0480022709.01.T01:exon:3275;Parent=MsG0480022709.01.T01
Chr4 CDS 75727980 75728047 75727980 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75727752 75727878 75727752 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75727134 75727202 75727134 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75726731 75726946 75726731 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75726498 75726634 75726498 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75726115 75726205 75726115 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75725842 75725901 75725842 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75725404 75725760 75725404 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75724577 75724835 75724577 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75724271 75724476 75724271 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Chr4 CDS 75723071 75723358 75723071 ID=MsG0480022709.01.T01:cds;Parent=MsG0480022709.01.T01
Gene Sequence

>MsG0480022709.01.T01

ATGCATGCTCCTATGACTGCTACTGGGTTAGTTCATGCTTCTCTTTCCCTTTTTGGAAATAATATACTGTCTGATTTACAAGGTTCACTGGATGCATGTTCTGCTTCTGTTCATGAGTATAAAATCCCCCCTAAAGCTCTTCTGGGATTACATTCATATTGTCCTATCCACTTTGATGCTTTCCATGCTGTCATGTTGAATTGTACCAGTGACTGTAGGGATTCAGAAGGCAATTACGCTGAAGATTATGTTGGGTCAAACAAGGTGATGCTCATCAAAGCATTGATGGCTGCACATGATATCCTGCTTGAAGATCTGAAAAGAATAAGCACAGGCATTGACCAAGCTATTGATTTGACTGAAATCGCGTTTGAATCAGATGATACAAAATGGTTTGATTCAACTCCACCAGCACGTGTCCAAAGTATTGATGGTGAACAATCACCTCAGCTGCCTGATAGGGAAGAAGTCAGTGCCGTGGATGCTACTCATAATATCAATTATCTAACCGAGGAATCAGTTCAACCTTTTTCTTGGGATGATCATCTGTTAAACTCTTTTCAGTCTCTAGCGAATCAGCTCTTATATCTCTGGAATGTATTTCTGAAATTCCACAGGGAAAATAAAACAAAAATACTTGAATTTCTGCGCAAATCCTGGGCTGTTGATCGGAGAACTGAATGGTCAATATGGATGGTGTACTCAAAGCCTATTCAAACTGCAATAATGCGTGCAGAACTTCATAGGCGAGGCATATCACAAATGAGGATCAACAATCGGGCGCTTCAAGACATGTATATATTTGGAGATCCTTTGCTTGTTCCTATTATTATTGTAGAACGCGTGACAAACGTGTACCGTTCTGCCAGTTTGAATTCAAACTTCATTTCTGTGGAGAATGATGCAAGGCATGTCCTAAGCAATGGTTCCAGGTCCACAAACAAGTTTAGTGGGAGTAGCCAGCAAAATGGGCATGTTTTGAGAGTAGTTGTTTTGTTCATGGGTTTCAGGCATGTTTCGCACACCTGCAGTCTCTTATATCTTCTTGATCTGTCTTTGGTTTTCTTTCCTTATCTTGTTACTTTGTCACCTTCAATTTGTAGGATTTGCAAACTACTATCTTGGGGAAATCATTTGGATTTACGGCTTGTTCGTAACCAATGGCTTTTAATAGACCCCGAGATACAGTTTCTAATGTCAGAGGCAAATGAAGAGAAAACATCTGGCGACTTCAGAGAAATGGGTTTTCGGCTTGCTCAGGAAGTGATCTCTTTCCTAAAAAGGAAAATGGATAAAGCTTCAAGAAGAAGAAACTTGAGAGATATCAAGCTCAGCTTCGTTGGTCATTCTATCGGTAATCTCATTGTCAGGGCAGCCTTAGCAGAAAGCATGATGGAGCCATATCTAAGATACTTGTATACCTATGTGTCGATATCGGGTCCACACTTGGGTTATATGTACAGTTCGAATTCTCTATTCAATTCAGGGCTTTGGCTATTGAAGAAGTTCAAGGGCACTCAATGCATCCATCAACTGACCTTTACGGATGATCCTGATCTTGAGAATACTTTCATCTATAATCTTTCCAAGGATGGTTATGTTCCTTATCATTCTGCTAGAATAGAACTGTGCCCAGCAGCTTCTTCGGATTTTTCTAAAAGAGGGAAAATCTTCCTACAGATGCTAAATAATTGCTTGGACCAAATCCGAACTTCCTCTGACCATCGCGTAATCATGCGCTGCGACGTCAACTTCAACGCTTCTTCCTACGGCAGGAACTTAAACACACTTATCGGACGAGCAGCTCATATAGAGTTCTTGGAGTCTGACATTTTTGCAAAGTTCATAATGTGGTCTTTCCCAGAGATGTTTAGATAA
Protein sequence

>MsG0480022709.01.T01

MHAPMTATGLVHASLSLFGNNILSDLQGSLDACSASVHEYKIPPKALLGLHSYCPIHFDAFHAVMLNCTSDCRDSEGNYAEDYVGSNKVMLIKALMAAHDILLEDLKRISTGIDQAIDLTEIAFESDDTKWFDSTPPARVQSIDGEQSPQLPDREEVSAVDATHNINYLTEESVQPFSWDDHLLNSFQSLANQLLYLWNVFLKFHRENKTKILEFLRKSWAVDRRTEWSIWMVYSKPIQTAIMRAELHRRGISQMRINNRALQDMYIFGDPLLVPIIIVERVTNVYRSASLNSNFISVENDARHVLSNGSRSTNKFSGSSQQNGHVLRVVVLFMGFRHVSHTCSLLYLLDLSLVFFPYLVTLSPSICRICKLLSWGNHLDLRLVRNQWLLIDPEIQFLMSEANEEKTSGDFREMGFRLAQEVISFLKRKMDKASRRRNLRDIKLSFVGHSIGNLIVRAALAESMMEPYLRYLYTYVSISGPHLGYMYSSNSLFNSGLWLLKKFKGTQCIHQLTFTDDPDLENTFIYNLSKDGYVPYHSARIELCPAASSDFSKRGKIFLQMLNNCLDQIRTSSDHRVIMRCDVNFNASSYGRNLNTLIGRAAHIEFLESDIFAKFIMWSFPEMFR*