AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022783.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022783.01.T01 MTR_4g096690 98.726 471 5 1 1 471 1 470 0.0 955
MsG0480022783.01.T01 MTR_1g103020 90.295 474 41 4 1 471 1 472 0.0 867
MsG0480022783.01.T01 MTR_8g099695 71.591 440 124 1 32 471 44 482 0.0 663
MsG0480022783.01.T01 MTR_8g099715 61.412 425 113 3 47 471 21 394 0.0 529
MsG0480022783.01.T01 MTR_2g043530 59.398 399 160 2 73 470 91 488 1.06e-173 497
MsG0480022783.01.T01 MTR_4g124880 59.250 400 159 4 73 470 94 491 2.63e-170 488
MsG0480022783.01.T01 MTR_2g043530 60.665 361 141 1 73 433 91 450 1.10e-160 462
MsG0480022783.01.T01 MTR_4g124880 60.519 347 133 4 126 470 1 345 1.95e-149 430
MsG0480022783.01.T01 MTR_8g099700 67.063 252 57 1 47 298 64 289 4.30e-117 345
MsG0480022783.01.T01 MTR_1g069385 39.631 434 235 7 59 467 37 468 1.96e-87 276
MsG0480022783.01.T01 MTR_1g069385 43.149 343 188 4 130 467 5 345 2.70e-81 256
MsG0480022783.01.T01 MTR_8g099705 74.590 122 31 0 328 449 1 122 1.37e-55 182
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022783.01.T01 AT5G46290 80.882 476 83 3 1 471 1 473 0.0 786
MsG0480022783.01.T01 AT5G46290 78.252 492 83 4 1 471 1 489 0.0 776
MsG0480022783.01.T01 AT5G46290 69.748 476 81 5 1 471 1 418 0.0 647
MsG0480022783.01.T01 AT1G74960 54.965 433 193 2 39 470 110 541 1.22e-167 483
MsG0480022783.01.T01 AT1G74960 54.965 433 193 2 39 470 110 541 1.22e-167 483
MsG0480022783.01.T01 AT1G74960 54.965 433 193 2 39 470 110 541 1.22e-167 483
MsG0480022783.01.T01 AT2G04540 40.230 435 230 12 59 468 31 460 7.78e-82 261

Find 155 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATAACAAGCATGTATTTA+TGG 0.129843 4:+76632745 MsG0480022783.01.T01:three_prime_UTR
TCCTTATGCTATTACAAATA+TGG 0.182977 4:+76629159 MsG0480022783.01.T01:CDS
TTGGGATTGATTTAGGTTTC+AGG 0.183362 4:+76629194 MsG0480022783.01.T01:CDS
GCCATTATTCCTATTGGTTT+GGG 0.188973 4:+76629334 MsG0480022783.01.T01:CDS
GGGCACTGCCTTGGCGCAGC+TGG 0.190007 4:+76631345 MsG0480022783.01.T01:CDS
GCTTTACTTGGGATTGATTT+AGG 0.219677 4:+76629187 MsG0480022783.01.T01:CDS
GCAGTTGAAATAGAATAATT+TGG 0.222982 4:-76629220 None:intergenic
CCAGGCATTTCAAATTCTTT+TGG 0.230083 4:+76632258 MsG0480022783.01.T01:intron
GGAGAGTCTCTTTGGGGTTT+TGG 0.230728 4:-76628583 None:intergenic
GATGAAACTTTGGTATTTAA+TGG 0.231536 4:-76628381 None:intergenic
TTCTACAGCAAAACAGTCTT+TGG 0.251483 4:-76632608 None:intergenic
AATGCTTAAATAAGCTCTTT+TGG 0.260712 4:-76632691 None:intergenic
TGCCATTATTCCTATTGGTT+TGG 0.267531 4:+76629333 MsG0480022783.01.T01:CDS
GAGACGACGGAGAGTCTCTT+TGG 0.301000 4:-76628591 None:intergenic
TGCGAACCGAGTAGGGAATT+TGG 0.306727 4:-76628781 None:intergenic
ATGACCCTAAAACTGCTTCT+AGG 0.311296 4:+76629395 MsG0480022783.01.T01:CDS
TCAAAATCAACTGCAGGTTC+TGG 0.321272 4:-76632096 None:intergenic
AGAGATTAATGCTATCAAAA+AGG 0.331270 4:+76631150 MsG0480022783.01.T01:CDS
TTGGGATCCTTCTCTCTTTG+AGG 0.337127 4:-76628636 None:intergenic
GTGGGATCACATTGATTGAT+AGG 0.337601 4:+76628748 MsG0480022783.01.T01:CDS
AGCAGATAAACTTGGCAATC+AGG 0.342572 4:-76632325 None:intergenic
AGTGATCACAACACGCTTCT+TGG 0.350950 4:-76628655 None:intergenic
CTGTGATACCAGTCTATGAT+AGG 0.352309 4:+76631324 MsG0480022783.01.T01:intron
AATATGGCTTCAGCTTTACT+TGG 0.353169 4:+76629175 MsG0480022783.01.T01:CDS
TATTGTTATTGAATCTTTGT+TGG 0.361058 4:+76632772 MsG0480022783.01.T01:three_prime_UTR
GAAGCTGCCATTATTCCTAT+TGG 0.362133 4:+76629328 MsG0480022783.01.T01:CDS
TGGGATTGATTTAGGTTTCA+GGG 0.362251 4:+76629195 MsG0480022783.01.T01:CDS
ATCTTCAAGTGCTTTCTTCC+CGG 0.364383 4:-76628892 None:intergenic
TTTGGCGGTGGTGGTGGCGG+CGG 0.369732 4:-76628565 None:intergenic
GGGTGAAGGTGCTGGAGTTT+TGG 0.370027 4:+76629450 MsG0480022783.01.T01:CDS
TTTGTTATGGGTGAAGGTGC+TGG 0.375390 4:+76629442 MsG0480022783.01.T01:CDS
ACCTATCATTGCTGAATACT+TGG 0.377637 4:+76629842 MsG0480022783.01.T01:CDS
CCCCAAACCAATAGGAATAA+TGG 0.379340 4:-76629335 None:intergenic
AGACGACGGAGAGTCTCTTT+GGG 0.379518 4:-76628590 None:intergenic
CTCGCTTCATGGCATGTTCA+AGG 0.383805 4:-76629815 None:intergenic
GGCACTGCCTTGGCGCAGCT+GGG 0.383994 4:+76631346 MsG0480022783.01.T01:CDS
GGTGGTGGTGGCGGCGGCAT+TGG 0.384156 4:-76628559 None:intergenic
CGTACGAATTGATTGATTGA+TGG 0.387158 4:-76631420 None:intergenic
TTCCACTCTTGTTGGTGACT+TGG 0.387671 4:+76631126 MsG0480022783.01.T01:CDS
TACATTTAGCTTGTTAAGAA+TGG 0.388600 4:+76632835 MsG0480022783.01.T01:three_prime_UTR
GATAGGTGCACCTCGCTTCA+TGG 0.393092 4:-76629826 None:intergenic
ATGCAGCCACCCTGTTGTTA+TGG 0.398709 4:-76631397 None:intergenic
GATAATTTGTGATGAAACTT+TGG 0.401563 4:-76628391 None:intergenic
TAAAGAACGTGCTGGTGTTT+TGG 0.402018 4:+76629045 MsG0480022783.01.T01:CDS
ACAATAAAAGCCATAACAAC+AGG 0.409441 4:+76631387 MsG0480022783.01.T01:CDS
AGCACGGAGATTTCATTGTT+TGG 0.410392 4:+76632643 MsG0480022783.01.T01:three_prime_UTR
GTCAGGAATGGGTGGTTTAA+CGG 0.413571 4:+76629072 MsG0480022783.01.T01:CDS
CTAAAACTGCTTCTAGGCCT+TGG 0.415317 4:+76629401 MsG0480022783.01.T01:CDS
GTGATCACAACACGCTTCTT+GGG 0.422999 4:-76628654 None:intergenic
CACTGCCTTGGCGCAGCTGG+GGG 0.431565 4:+76631348 MsG0480022783.01.T01:CDS
CGGAGTGGTTCGAGTGGTGA+AGG 0.433580 4:-76628525 None:intergenic
CTCTCTTTGAGGAGCGGCTG+TGG 0.435852 4:-76628625 None:intergenic
GGTGGTGGCGGCGGCATTGG+AGG 0.443199 4:-76628556 None:intergenic
GCCATATTTGTAATAGCATA+AGG 0.446803 4:-76629160 None:intergenic
GTTAAGAATCTGATTGAAAA+GGG 0.449404 4:+76629109 MsG0480022783.01.T01:CDS
CATGCAACTTCCACTCTTGT+TGG 0.451361 4:+76631118 MsG0480022783.01.T01:CDS
GCACTGCCTTGGCGCAGCTG+GGG 0.451754 4:+76631347 MsG0480022783.01.T01:CDS
ACGCCAAGCCCATCAGATCT+TGG 0.452089 4:-76629903 None:intergenic
AGTTAAGAATCTGATTGAAA+AGG 0.455234 4:+76629108 MsG0480022783.01.T01:CDS
CTCCGGTACTGCAATGTCGC+CGG 0.463407 4:+76628873 MsG0480022783.01.T01:CDS
TCCCGGCGACATTGCAGTAC+CGG 0.468002 4:-76628875 None:intergenic
TAAAACTGCTTCTAGGCCTT+GGG 0.469150 4:+76629402 MsG0480022783.01.T01:CDS
CCCACCCGCAATCATCAAAT+CGG 0.469221 4:-76629302 None:intergenic
GGTGAAGGGCGGAGAGTGAA+GGG 0.471647 4:-76628510 None:intergenic
TTGGTTGGGTCAGGAATGGG+TGG 0.473581 4:+76629064 MsG0480022783.01.T01:CDS
CCATTATTCCTATTGGTTTG+GGG 0.476862 4:+76629335 MsG0480022783.01.T01:CDS
CTGCTGCCAATCACATTCGT+AGG 0.477416 4:+76629272 MsG0480022783.01.T01:CDS
ATGACTGATCCAAGATCTGA+TGG 0.479018 4:+76629894 MsG0480022783.01.T01:CDS
CATTATTCCTATTGGTTTGG+GGG 0.482868 4:+76629336 MsG0480022783.01.T01:CDS
GAGGCCGATTTGATGATTGC+GGG 0.483517 4:+76629298 MsG0480022783.01.T01:CDS
CCCAAGTATTCAGCAATGAT+AGG 0.484502 4:-76629843 None:intergenic
AAATTCCCTACTCGGTTCGC+AGG 0.490002 4:+76628783 MsG0480022783.01.T01:CDS
CTCACCCCTACGAATGTGAT+TGG 0.491901 4:-76629278 None:intergenic
GATCCAAGATCTGATGGGCT+TGG 0.498358 4:+76629900 MsG0480022783.01.T01:CDS
CTTTACTTAACAATAAGATA+AGG 0.499417 4:-76632717 None:intergenic
TGCTGCCAATCACATTCGTA+GGG 0.501866 4:+76629273 MsG0480022783.01.T01:CDS
TCTGACCTGCGAACCGAGTA+GGG 0.504912 4:-76628788 None:intergenic
GCACTTGAAGATGCTGGTCT+CGG 0.506363 4:+76628903 MsG0480022783.01.T01:CDS
TCCGGTACTGCAATGTCGCC+GGG 0.507162 4:+76628874 MsG0480022783.01.T01:CDS
GAGTAAGACAATACCTCCTC+GGG 0.513068 4:-76629969 None:intergenic
AAGAAGCGTGTTGTGATCAC+TGG 0.513825 4:+76628657 MsG0480022783.01.T01:CDS
ATGCTTCCAAATTCCCTACT+CGG 0.516081 4:+76628775 MsG0480022783.01.T01:CDS
CAGCAGCATGAAATTAATGT+TGG 0.518157 4:+76632138 MsG0480022783.01.T01:CDS
AGCTTCTCGCCGGTGAGAGT+GGG 0.518796 4:+76628730 MsG0480022783.01.T01:CDS
TTGAGGAGCGGCTGTGGTGA+CGG 0.521594 4:-76628619 None:intergenic
TGAGGCCGATTTGATGATTG+CGG 0.522914 4:+76629297 MsG0480022783.01.T01:CDS
AAGAAAGCACTTGAAGATGC+TGG 0.527588 4:+76628897 MsG0480022783.01.T01:CDS
AGCTCTGAGGGTTACATCGA+CGG 0.529142 4:+76628822 MsG0480022783.01.T01:CDS
CGGCGTCTACAAGACTGCTC+TGG 0.531158 4:-76629938 None:intergenic
CGGGAAGAATGACCGGAGAC+AGG 0.533743 4:+76628842 MsG0480022783.01.T01:CDS
ATCCGTGGGTTTAGCTCTGA+GGG 0.533824 4:+76628810 MsG0480022783.01.T01:CDS
AAGCTTCTCGCCGGTGAGAG+TGG 0.533893 4:+76628729 MsG0480022783.01.T01:CDS
ATATGGCTTCAGCTTTACTT+GGG 0.536843 4:+76629176 MsG0480022783.01.T01:CDS
ATTATTCCTATTGGTTTGGG+GGG 0.537089 4:+76629337 MsG0480022783.01.T01:CDS
CAATGTGATCCCACTCTCAC+CGG 0.537398 4:-76628739 None:intergenic
GCTCTGAGGGTTACATCGAC+GGG 0.540385 4:+76628823 MsG0480022783.01.T01:CDS
GACGACGGAGAGTCTCTTTG+GGG 0.543879 4:-76628589 None:intergenic
GCAGATAAACTTGGCAATCA+GGG 0.545207 4:-76632324 None:intergenic
GATCCGTGGGTTTAGCTCTG+AGG 0.548499 4:+76628809 MsG0480022783.01.T01:CDS
GGTTCGCAGGTCAGATCCGT+GGG 0.552078 4:+76628796 MsG0480022783.01.T01:CDS
ACATGAAGAGCAGATAAACT+TGG 0.553144 4:-76632333 None:intergenic
TTGTTCTCTCTACATCATTG+AGG 0.554649 4:+76632504 MsG0480022783.01.T01:three_prime_UTR
CGGTGCCGAAAATCTCGATA+AGG 0.557505 4:+76628923 MsG0480022783.01.T01:CDS
CGGTTCGCAGGTCAGATCCG+TGG 0.558021 4:+76628795 MsG0480022783.01.T01:CDS
AGAGTAAGACAATACCTCCT+CGG 0.558328 4:-76629970 None:intergenic
GGGATTGATTTAGGTTTCAG+GGG 0.561124 4:+76629196 MsG0480022783.01.T01:CDS
ATGGGTGGCGTCACTGTACA+TGG 0.561821 4:+76628681 MsG0480022783.01.T01:CDS
TGGTGAAGGGCGGAGAGTGA+AGG 0.562830 4:-76628511 None:intergenic
GGAGACAATCATCCTGTCTC+CGG 0.564955 4:-76628854 None:intergenic
GCCGATTTGATGATTGCGGG+TGG 0.565161 4:+76629301 MsG0480022783.01.T01:CDS
CAATCACATTCGTAGGGGTG+AGG 0.569075 4:+76629279 MsG0480022783.01.T01:CDS
AATCAGATTCTTAACTCCGT+CGG 0.570042 4:-76629101 None:intergenic
CCTATCATTGCTGAATACTT+GGG 0.577362 4:+76629843 MsG0480022783.01.T01:CDS
ACGGTATCAAAATCAACTGC+AGG 0.580461 4:-76632102 None:intergenic
ACATCGACGGGAAGAATGAC+CGG 0.581180 4:+76628835 MsG0480022783.01.T01:CDS
CGTGTTGTGATCACTGGCAT+GGG 0.584729 4:+76628663 MsG0480022783.01.T01:CDS
TTGTTTGGTAGTTAGACTTG+CGG 0.585993 4:+76632658 MsG0480022783.01.T01:three_prime_UTR
TGCCAAGTCACCAACAAGAG+TGG 0.586198 4:-76631128 None:intergenic
TTCTACGAGAAGCTTCTCGC+CGG 0.588660 4:+76628720 MsG0480022783.01.T01:CDS
TACCTCCTCGGGTGACACAC+CGG 0.588795 4:-76629958 None:intergenic
TGGTGGACACAACTCTGTCG+TGG 0.588850 4:+76632284 MsG0480022783.01.T01:CDS
CTGCTGCTTGACATTTGCCA+CGG 0.591270 4:-76632121 None:intergenic
TCTATGATAGGGCACTGCCT+TGG 0.593139 4:+76631336 MsG0480022783.01.T01:CDS
GTTGTGATCACTGGCATGGG+TGG 0.596678 4:+76628666 MsG0480022783.01.T01:CDS
ATGACATGATAATACCTTGG+TGG 0.597289 4:-76631206 None:intergenic
GCGTGTTGTGATCACTGGCA+TGG 0.599227 4:+76628662 MsG0480022783.01.T01:CDS
ATCCTTCTCTCTTTGAGGAG+CGG 0.601863 4:-76628631 None:intergenic
CCGATTTGATGATTGCGGGT+GGG 0.602467 4:+76629302 MsG0480022783.01.T01:CDS
TGTGATACCAGTCTATGATA+GGG 0.603213 4:+76631325 MsG0480022783.01.T01:intron
GGAGTGGTTCGAGTGGTGAA+GGG 0.605118 4:-76628524 None:intergenic
AGCCGCTCCTCAAAGAGAGA+AGG 0.608919 4:+76628629 MsG0480022783.01.T01:CDS
ATCTGACCTGCGAACCGAGT+AGG 0.609425 4:-76628789 None:intergenic
GGAGACAGGATGATTGTCTC+CGG 0.614203 4:+76628856 MsG0480022783.01.T01:CDS
ACTGAGAGAATGAAGCTGAA+TGG 0.617239 4:-76628447 None:intergenic
CATCAAAATTAATGCCACCA+AGG 0.623828 4:+76631192 MsG0480022783.01.T01:CDS
CCATCACGGTCTTTATCCCA+AGG 0.625058 4:-76629418 None:intergenic
CCTTGGGATAAAGACCGTGA+TGG 0.627148 4:+76629418 MsG0480022783.01.T01:CDS
CTTGAACATGCCATGAAGCG+AGG 0.627955 4:+76629816 MsG0480022783.01.T01:CDS
CGCCGGTGTGTCACCCGAGG+AGG 0.641700 4:+76629956 MsG0480022783.01.T01:CDS
AGGAGCGGCTGTGGTGACGG+CGG 0.642442 4:-76628616 None:intergenic
TGGCAATCAGGGTCTGAAAG+CGG 0.643041 4:-76632313 None:intergenic
TAGATTGATAAAGAACGTGC+TGG 0.644130 4:+76629037 MsG0480022783.01.T01:intron
TGACTGATCCAAGATCTGAT+GGG 0.646479 4:+76629895 MsG0480022783.01.T01:CDS
AGACGCCGGTGTGTCACCCG+AGG 0.647368 4:+76629953 MsG0480022783.01.T01:CDS
ATCATTGCTGAATACTTGGG+AGG 0.652856 4:+76629846 MsG0480022783.01.T01:CDS
CAGAGCAGTCTTGTAGACGC+CGG 0.652992 4:+76629939 MsG0480022783.01.T01:CDS
GTGGTTCGAGTGGTGAAGGG+CGG 0.658669 4:-76628521 None:intergenic
TGAAGCTGAATGGTGTGATG+AGG 0.664768 4:-76628437 None:intergenic
CACCCATAACAAAACCATCA+CGG 0.674295 4:-76629432 None:intergenic
CAATAAAAGCCATAACAACA+GGG 0.677458 4:+76631388 MsG0480022783.01.T01:CDS
GGTGACGGCGGAAGAGACGA+CGG 0.681754 4:-76628604 None:intergenic
AACCCTCAGAGCTAAACCCA+CGG 0.685542 4:-76628812 None:intergenic
AAGGCTCTTCATGTAGAACA+CGG 0.713024 4:+76632465 MsG0480022783.01.T01:intron
GCTGCCAATCACATTCGTAG+GGG 0.729757 4:+76629274 MsG0480022783.01.T01:CDS
TAAAAGCCATAACAACAGGG+TGG 0.762513 4:+76631391 MsG0480022783.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTCAATTACATAAATT+AGG + Chr4:76630312-76630331 MsG0480022783.01.T01:intron 10.0%
!! TTTAATAAAAGTTAAATAAC+AGG - Chr4:76631681-76631700 None:intergenic 10.0%
!!! AACTTTTATATTGTTAATTA+AGG - Chr4:76629534-76629553 None:intergenic 10.0%
!!! AATATATTTAAAACATCAAT+CGG + Chr4:76630668-76630687 MsG0480022783.01.T01:intron 10.0%
!! AAAATATTAATCAGACATTA+AGG - Chr4:76630859-76630878 None:intergenic 15.0%
!! ATAAATAAGGTTATATTGAA+CGG - Chr4:76631647-76631666 None:intergenic 15.0%
!! ATTAATTATAATTCTTACGA+AGG - Chr4:76631747-76631766 None:intergenic 15.0%
!! TTAAATATATTCTAATCACA+AGG - Chr4:76630659-76630678 None:intergenic 15.0%
!!! AATTTGCTTATAAAAAGAAA+CGG - Chr4:76631030-76631011 None:intergenic 15.0%
!!! AATTTGCTTATAAAAAGAAA+TGG + Chr4:76631011-76631030 MsG0480022783.01.T01:intron 15.0%
!!! ACTACAACTTTTAAATATTA+TGG - Chr4:76632543-76632562 None:intergenic 15.0%
!!! CCTGTTTTTTTTTTTTTTTT+GGG + Chr4:76629730-76629749 MsG0480022783.01.T01:intron 15.0%
!!! GATTTAGAATTATTCTTTTT+TGG - Chr4:76629669-76629688 None:intergenic 15.0%
!!! TCCTGTTTTTTTTTTTTTTT+TGG + Chr4:76629729-76629748 MsG0480022783.01.T01:intron 15.0%
!!! TTCAATATAACCTTATTTAT+TGG + Chr4:76631647-76631666 MsG0480022783.01.T01:intron 15.0%
!! AAAAAAATCCAAATCCAATT+AGG - Chr4:76629007-76629026 None:intergenic 20.0%
!! AAAAAATCCAAATCCAATTA+GGG - Chr4:76629006-76629025 None:intergenic 20.0%
!! AGAAAAGCAATGAATTAAAT+GGG - Chr4:76630052-76630071 None:intergenic 20.0%
!! AGAACAATAACAAATCATTA+AGG - Chr4:76629496-76629515 None:intergenic 20.0%
!! ATAAAAGTTAAATAACAGGT+TGG - Chr4:76631677-76631696 None:intergenic 20.0%
!! ATAGCATAAGGAATAAAAAA+AGG - Chr4:76629151-76629170 None:intergenic 20.0%
!! CCCAAAAAAAAAAAAAAAAC+AGG - Chr4:76629733-76629752 None:intergenic 20.0%
!! CTTTACTTAACAATAAGATA+AGG - Chr4:76632720-76632739 None:intergenic 20.0%
!! TAAAAGTTAAATAACAGGTT+GGG - Chr4:76631676-76631695 None:intergenic 20.0%
!! TAATAACAAGCATGTATTTA+TGG + Chr4:76632745-76632764 MsG0480022783.01.T01:three_prime_UTR 20.0%
!! TATATGAACTATCATGTTAT+TGG + Chr4:76631891-76631910 MsG0480022783.01.T01:intron 20.0%
!! TTAGTAAAATCAAAAACAGT+TGG - Chr4:76630539-76630558 None:intergenic 20.0%
!!! AATTCTTGTTTTTCATGATT+AGG + Chr4:76631450-76631469 MsG0480022783.01.T01:intron 20.0%
!!! ATGATTTGTTATTGTTCTTT+TGG + Chr4:76629498-76629517 MsG0480022783.01.T01:intron 20.0%
!!! ATTTCAAATTCTTTTGGATT+TGG + Chr4:76632264-76632283 MsG0480022783.01.T01:CDS 20.0%
!!! TATTGTTATTGAATCTTTGT+TGG + Chr4:76632772-76632791 MsG0480022783.01.T01:three_prime_UTR 20.0%
! AAAAGTTAAATAACAGGTTG+GGG - Chr4:76631675-76631694 None:intergenic 25.0%
! AGAAAACGTAAAAGAAGAAA+AGG + Chr4:76630443-76630462 MsG0480022783.01.T01:intron 25.0%
! AGAGATTAATGCTATCAAAA+AGG + Chr4:76631150-76631169 MsG0480022783.01.T01:CDS 25.0%
! AGCATAAAATGAACAATTAC+AGG - Chr4:76632566-76632585 None:intergenic 25.0%
! AGTTAAGAATCTGATTGAAA+AGG + Chr4:76629108-76629127 MsG0480022783.01.T01:CDS 25.0%
! ATGTATGTGGTTCATAATAT+GGG - Chr4:76630964-76630983 None:intergenic 25.0%
! ATTTAGTGGTATGATAAAAC+TGG + Chr4:76630420-76630439 MsG0480022783.01.T01:intron 25.0%
! CATTCAATTAATGATGTATG+TGG + Chr4:76630938-76630957 MsG0480022783.01.T01:intron 25.0%
! CATTCAATTAATGATGTATG+TGG - Chr4:76630957-76630938 None:intergenic 25.0%
! CTTTCACTTTGCTAATTTAT+GGG - Chr4:76631058-76631077 None:intergenic 25.0%
! GAGAAAAGCAATGAATTAAA+TGG - Chr4:76630053-76630072 None:intergenic 25.0%
! GATGAAACTTTGGTATTTAA+TGG - Chr4:76628384-76628403 None:intergenic 25.0%
! GCAAACAAAATGATTACATA+TGG - Chr4:76632054-76632073 None:intergenic 25.0%
! GCAGTTGAAATAGAATAATT+TGG - Chr4:76629223-76629242 None:intergenic 25.0%
! GTTAAGAATCTGATTGAAAA+GGG + Chr4:76629109-76629128 MsG0480022783.01.T01:CDS 25.0%
! TATAAACTGATTATTTGCAG+AGG - Chr4:76630718-76630737 None:intergenic 25.0%
! TATATCTGAATTGAACTGAA+CGG + Chr4:76628978-76628997 MsG0480022783.01.T01:intron 25.0%
! TCCTTATGCTATTACAAATA+TGG + Chr4:76629159-76629178 MsG0480022783.01.T01:CDS 25.0%
! TGCTTATAAAAAGAAATGGA+GGG + Chr4:76631015-76631034 MsG0480022783.01.T01:intron 25.0%
! TTAATGATTTCTTTACTGTG+TGG + Chr4:76631762-76631781 MsG0480022783.01.T01:intron 25.0%
! TTGCTTATAAAAAGAAATGG+AGG + Chr4:76631014-76631033 MsG0480022783.01.T01:intron 25.0%
!! AAATTTATAGCATTGAGTTC+TGG + Chr4:76630257-76630276 MsG0480022783.01.T01:intron 25.0%
!! AACATATCATATCCTTTTAC+TGG + Chr4:76632006-76632025 MsG0480022783.01.T01:intron 25.0%
!! AATGCTTAAATAAGCTCTTT+TGG - Chr4:76632694-76632713 None:intergenic 25.0%
!! GATAATTTGTGATGAAACTT+TGG - Chr4:76628394-76628413 None:intergenic 25.0%
!! TACTATAACTTTAAAGGTGA+TGG + Chr4:76629788-76629807 MsG0480022783.01.T01:intron 25.0%
!! TTAAACCTTATCGAGATTTT+CGG - Chr4:76628931-76628950 None:intergenic 25.0%
!!! AGAACTTTTTAAAAGTAGCA+CGG + Chr4:76632627-76632646 MsG0480022783.01.T01:three_prime_UTR 25.0%
!!! ATACAGAAATTAACTTGTAG+AGG - Chr4:76629757-76629776 None:intergenic 25.0%
!!! TACATTTAGCTTGTTAAGAA+TGG + Chr4:76632835-76632854 MsG0480022783.01.T01:three_prime_UTR 25.0%
AAAAATAGAGTAAGCTGGAA+AGG - Chr4:76630091-76630110 None:intergenic 30.0%
AAAACATCAATCGGATGTAA+GGG + Chr4:76630677-76630696 MsG0480022783.01.T01:intron 30.0%
AACAGAAAAATAGAGTAAGC+TGG - Chr4:76630096-76630115 None:intergenic 30.0%
ACAATAAAAGCCATAACAAC+AGG + Chr4:76631387-76631406 MsG0480022783.01.T01:CDS 30.0%
ACGTGATAAAGACCATAATT+TGG + Chr4:76632203-76632222 MsG0480022783.01.T01:intron 30.0%
ATAAAGACCATAATTTGGAC+TGG + Chr4:76632208-76632227 MsG0480022783.01.T01:intron 30.0%
ATTAGAATCAACTGAGAGAA+TGG + Chr4:76631487-76631506 MsG0480022783.01.T01:intron 30.0%
ATTATTGAAGGGAGAAACTA+AGG + Chr4:76630491-76630510 MsG0480022783.01.T01:intron 30.0%
CAATAAAAGCCATAACAACA+GGG + Chr4:76631388-76631407 MsG0480022783.01.T01:CDS 30.0%
GATGTATGTGGTTCATAATA+TGG - Chr4:76630965-76630984 None:intergenic 30.0%
GCCATATTTGTAATAGCATA+AGG - Chr4:76629163-76629182 None:intergenic 30.0%
GCTTTCACTTTGCTAATTTA+TGG - Chr4:76631059-76631078 None:intergenic 30.0%
GGGTTTCATTTCTAATCATA+TGG + Chr4:76631960-76631979 MsG0480022783.01.T01:intron 30.0%
TAAAACATCAATCGGATGTA+AGG + Chr4:76630676-76630695 MsG0480022783.01.T01:intron 30.0%
TGCTTATAAAAAGAAACGGA+GGG - Chr4:76630900-76630919 None:intergenic 30.0%
TTAGAATCAACTGAGAGAAT+GGG + Chr4:76631488-76631507 MsG0480022783.01.T01:intron 30.0%
TTAGTTACCAGTCCAAATTA+TGG - Chr4:76632218-76632237 None:intergenic 30.0%
TTGCTTATAAAAAGAAACGG+AGG - Chr4:76630901-76630920 None:intergenic 30.0%
! AAGTGGAAAGACAATTTGTT+AGG + Chr4:76630795-76630814 MsG0480022783.01.T01:intron 30.0%
! ATGAAAGTTAATTTGAGACC+AGG - Chr4:76631583-76631602 None:intergenic 30.0%
! TCAAATTCTTTTGGATTTGG+TGG + Chr4:76632267-76632286 MsG0480022783.01.T01:CDS 30.0%
! TGAATCAGTTCATAGCTTTT+TGG + Chr4:76632802-76632821 MsG0480022783.01.T01:three_prime_UTR 30.0%
! TGTGTGTTTTCAACATCTTT+TGG + Chr4:76630135-76630154 MsG0480022783.01.T01:intron 30.0%
! TGTTGTTATGGCTTTTATTG+TGG - Chr4:76631388-76631407 None:intergenic 30.0%
! TTTCAACATCTTTTGGTACA+CGG + Chr4:76630142-76630161 MsG0480022783.01.T01:intron 30.0%
!! ATAGTGAGAGCATTATTGAA+GGG + Chr4:76630480-76630499 MsG0480022783.01.T01:intron 30.0%
!! CATGTCATTTGCTTCTTTTT+AGG + Chr4:76631078-76631097 MsG0480022783.01.T01:intron 30.0%
!! CATTAATTTTGATGCCAGAA+GGG - Chr4:76631186-76631205 None:intergenic 30.0%
!! CGAGAGTACTATAACTTTAA+AGG + Chr4:76629782-76629801 MsG0480022783.01.T01:intron 30.0%
!! GATTCGACAAAGTTTTATGT+TGG + Chr4:76632382-76632401 MsG0480022783.01.T01:intron 30.0%
!! TGATTACATATGGTTCTGAA+AGG - Chr4:76632044-76632063 None:intergenic 30.0%
!! TGTAATCATTTTGTTTGCCT+TGG + Chr4:76632056-76632075 MsG0480022783.01.T01:intron 30.0%
!!! CTTTTTTGGATCATGTACAA+AGG - Chr4:76629655-76629674 None:intergenic 30.0%
!!! GTTATTTTTGATTCATTCCC+TGG + Chr4:76631277-76631296 MsG0480022783.01.T01:intron 30.0%
AAACATCAATCGGATGTAAG+GGG + Chr4:76630678-76630697 MsG0480022783.01.T01:intron 35.0%
AAACTGATTATTTGCAGAGG+AGG - Chr4:76630715-76630734 None:intergenic 35.0%
AAGCTGCTAGCATAAATAAG+TGG + Chr4:76630778-76630797 MsG0480022783.01.T01:intron 35.0%
AATATGGCTTCAGCTTTACT+TGG + Chr4:76629175-76629194 MsG0480022783.01.T01:CDS 35.0%
AATCAGATTCTTAACTCCGT+CGG - Chr4:76629104-76629123 None:intergenic 35.0%
ACAGCATATGCATCAGTTAA+TGG - Chr4:76631303-76631322 None:intergenic 35.0%
ACATGAAGAGCAGATAAACT+TGG - Chr4:76632336-76632355 None:intergenic 35.0%
ACCACGTGAGTAAAAAGAAA+AGG - Chr4:76631851-76631870 None:intergenic 35.0%
ACCTATCATTGCTGAATACT+TGG + Chr4:76629842-76629861 MsG0480022783.01.T01:CDS 35.0%
ACGTGAAATGAAAAATGCAC+TGG - Chr4:76632187-76632206 None:intergenic 35.0%
ATAAAACAGAAAGCTTTCGC+TGG - Chr4:76631245-76631264 None:intergenic 35.0%
ATATGGCTTCAGCTTTACTT+GGG + Chr4:76629176-76629195 MsG0480022783.01.T01:CDS 35.0%
ATGACATGATAATACCTTGG+TGG - Chr4:76631209-76631228 None:intergenic 35.0%
CAGCAGCATGAAATTAATGT+TGG + Chr4:76632138-76632157 MsG0480022783.01.T01:CDS 35.0%
CATCAAAATTAATGCCACCA+AGG + Chr4:76631192-76631211 MsG0480022783.01.T01:CDS 35.0%
CATTCATCAGGTCAAATAGA+GGG + Chr4:76630752-76630771 MsG0480022783.01.T01:intron 35.0%
CCTATCATTGCTGAATACTT+GGG + Chr4:76629843-76629862 MsG0480022783.01.T01:CDS 35.0%
CGTACGAATTGATTGATTGA+TGG - Chr4:76631423-76631442 None:intergenic 35.0%
TAGATTGATAAAGAACGTGC+TGG + Chr4:76629037-76629056 MsG0480022783.01.T01:intron 35.0%
TAGTTACTTGCTCATTCATC+AGG + Chr4:76630740-76630759 MsG0480022783.01.T01:intron 35.0%
TCATTCATCAGGTCAAATAG+AGG + Chr4:76630751-76630770 MsG0480022783.01.T01:intron 35.0%
TCCATGACATGATAATACCT+TGG - Chr4:76631212-76631231 None:intergenic 35.0%
TGATGAATGAGCAAGTAACT+AGG - Chr4:76630741-76630760 None:intergenic 35.0%
TGCCTGGAAGAAAGAAAAAA+AGG - Chr4:76632245-76632264 None:intergenic 35.0%
TGTGATACCAGTCTATGATA+GGG + Chr4:76631325-76631344 MsG0480022783.01.T01:intron 35.0%
TTCTACAGCAAAACAGTCTT+TGG - Chr4:76632611-76632630 None:intergenic 35.0%
TTGTTCTCTCTACATCATTG+AGG + Chr4:76632504-76632523 MsG0480022783.01.T01:three_prime_UTR 35.0%
! ACCAAGGTATTATCATGTCA+TGG + Chr4:76631208-76631227 MsG0480022783.01.T01:intron 35.0%
! ACCTTTTCTTTTTACTCACG+TGG + Chr4:76631847-76631866 MsG0480022783.01.T01:intron 35.0%
! AGAGAATGGGCTTTCATTAT+TGG + Chr4:76631501-76631520 MsG0480022783.01.T01:intron 35.0%
! CCAAAAGAATTTGAAATGCC+TGG - Chr4:76632261-76632280 None:intergenic 35.0%
! CCAGGCATTTCAAATTCTTT+TGG + Chr4:76632258-76632277 MsG0480022783.01.T01:intron 35.0%
! GCTTTACTTGGGATTGATTT+AGG + Chr4:76629187-76629206 MsG0480022783.01.T01:CDS 35.0%
! TCTGTTTTATAGATCATCGC+AGG + Chr4:76631255-76631274 MsG0480022783.01.T01:intron 35.0%
! TGCCATTATTCCTATTGGTT+TGG + Chr4:76629333-76629352 MsG0480022783.01.T01:CDS 35.0%
! TGGGATTGATTTAGGTTTCA+GGG + Chr4:76629195-76629214 MsG0480022783.01.T01:CDS 35.0%
! TGTCTTGTATTTCTGCATAC+TGG + Chr4:76630574-76630593 MsG0480022783.01.T01:intron 35.0%
! TTGGGATTGATTTAGGTTTC+AGG + Chr4:76629194-76629213 MsG0480022783.01.T01:CDS 35.0%
! TTGTTTGGTAGTTAGACTTG+CGG + Chr4:76632658-76632677 MsG0480022783.01.T01:three_prime_UTR 35.0%
! TTTCACGAAGTGTCTATAAG+TGG + Chr4:76629692-76629711 MsG0480022783.01.T01:intron 35.0%
! TTTTGGTACACGGTACAATA+GGG + Chr4:76630152-76630171 MsG0480022783.01.T01:intron 35.0%
!! AATTTGGACTGGTAACTAAC+TGG + Chr4:76632219-76632238 MsG0480022783.01.T01:intron 35.0%
!! ATGGTTCTGAAAGGCAAAAT+AGG - Chr4:76632035-76632054 None:intergenic 35.0%
!! ATTATTCCTATTGGTTTGGG+GGG + Chr4:76629337-76629356 MsG0480022783.01.T01:CDS 35.0%
!! CATAGTGAGAGCATTATTGA+AGG + Chr4:76630479-76630498 MsG0480022783.01.T01:intron 35.0%
!! CATTATTCCTATTGGTTTGG+GGG + Chr4:76629336-76629355 MsG0480022783.01.T01:CDS 35.0%
!! CCATTATTCCTATTGGTTTG+GGG + Chr4:76629335-76629354 MsG0480022783.01.T01:CDS 35.0%
!! GCATTAATTTTGATGCCAGA+AGG - Chr4:76631187-76631206 None:intergenic 35.0%
!! GCCATTATTCCTATTGGTTT+GGG + Chr4:76629334-76629353 MsG0480022783.01.T01:CDS 35.0%
!! TTGTCGAATCTCTAAGACAT+GGG - Chr4:76632372-76632391 None:intergenic 35.0%
!! TTTGTCGAATCTCTAAGACA+TGG - Chr4:76632373-76632392 None:intergenic 35.0%
!!! ACAACCCTCTTTTTTCGTTT+GGG + Chr4:76632420-76632439 MsG0480022783.01.T01:intron 35.0%
AACGGATCCCTAATTGGATT+TGG + Chr4:76628996-76629015 MsG0480022783.01.T01:intron 40.0%
AAGGCTCTTCATGTAGAACA+CGG + Chr4:76632465-76632484 MsG0480022783.01.T01:intron 40.0%
ACGGTATCAAAATCAACTGC+AGG - Chr4:76632105-76632124 None:intergenic 40.0%
ACTATGGCGTTAGCATTTAG+TGG + Chr4:76630406-76630425 MsG0480022783.01.T01:intron 40.0%
ACTGAGAGAATGAAGCTGAA+TGG - Chr4:76628450-76628469 None:intergenic 40.0%
AGAGTAAGACAATACCTCCT+CGG - Chr4:76629973-76629992 None:intergenic 40.0%
AGCACGGAGATTTCATTGTT+TGG + Chr4:76632643-76632662 MsG0480022783.01.T01:three_prime_UTR 40.0%
AGCAGATAAACTTGGCAATC+AGG - Chr4:76632328-76632347 None:intergenic 40.0%
ATATGCATCAGTTAATGGCC+AGG - Chr4:76631298-76631317 None:intergenic 40.0%
ATCATTGCTGAATACTTGGG+AGG + Chr4:76629846-76629865 MsG0480022783.01.T01:CDS 40.0%
ATCTTCAAGTGCTTTCTTCC+CGG - Chr4:76628895-76628914 None:intergenic 40.0%
ATGACCCTAAAACTGCTTCT+AGG + Chr4:76629395-76629414 MsG0480022783.01.T01:CDS 40.0%
ATGACTGATCCAAGATCTGA+TGG + Chr4:76629894-76629913 MsG0480022783.01.T01:CDS 40.0%
ATGCTTCCAAATTCCCTACT+CGG + Chr4:76628775-76628794 MsG0480022783.01.T01:CDS 40.0%
CAAAATAGGAGGCCAGTAAA+AGG - Chr4:76632021-76632040 None:intergenic 40.0%
CACCCATAACAAAACCATCA+CGG - Chr4:76629435-76629454 None:intergenic 40.0%
CCCAAGTATTCAGCAATGAT+AGG - Chr4:76629846-76629865 None:intergenic 40.0%
CCCCAAACCAATAGGAATAA+TGG - Chr4:76629338-76629357 None:intergenic 40.0%
CGAAAAAAGAGGGTTGTGTT+AGG - Chr4:76632417-76632436 None:intergenic 40.0%
CTGTGATACCAGTCTATGAT+AGG + Chr4:76631324-76631343 MsG0480022783.01.T01:intron 40.0%
CTTAGCAACAGCTTTACAAG+AGG - Chr4:76630210-76630229 None:intergenic 40.0%
GAAGCTGCCATTATTCCTAT+TGG + Chr4:76629328-76629347 MsG0480022783.01.T01:CDS 40.0%
GACAAATCAACATGCAGCAA+TGG - Chr4:76630821-76630840 None:intergenic 40.0%
GCAGATAAACTTGGCAATCA+GGG - Chr4:76632327-76632346 None:intergenic 40.0%
GCTAACATAATGTAGCATCC+TGG - Chr4:76630614-76630633 None:intergenic 40.0%
GGAAAGGAAAAACACACTGA+AGG - Chr4:76630075-76630094 None:intergenic 40.0%
GTCAAGCCAAGATTTCTTAG+AGG - Chr4:76630517-76630536 None:intergenic 40.0%
TAAAACTGCTTCTAGGCCTT+GGG + Chr4:76629402-76629421 MsG0480022783.01.T01:CDS 40.0%
TAAAAGCCATAACAACAGGG+TGG + Chr4:76631391-76631410 MsG0480022783.01.T01:CDS 40.0%
TATGCATCAGTTAATGGCCA+GGG - Chr4:76631297-76631316 None:intergenic 40.0%
TATGTAAAGCTGTCTGCACA+CGG + Chr4:76630360-76630379 MsG0480022783.01.T01:intron 40.0%
TATTGTGGGGTGGATAAAAG+AGG + Chr4:76631931-76631950 MsG0480022783.01.T01:intron 40.0%
TCAAAATCAACTGCAGGTTC+TGG - Chr4:76632099-76632118 None:intergenic 40.0%
TGACTGATCCAAGATCTGAT+GGG + Chr4:76629895-76629914 MsG0480022783.01.T01:CDS 40.0%
TTTGGTACACGGTACAATAG+GGG + Chr4:76630153-76630172 MsG0480022783.01.T01:intron 40.0%
TTTGTTTGCCTTGGTCTCTT+TGG + Chr4:76632065-76632084 MsG0480022783.01.T01:intron 40.0%
! AAGGCCTAGAAGCAGTTTTA+GGG - Chr4:76629402-76629421 None:intergenic 40.0%
! ACATTTTATCTGCCACCTCT+TGG + Chr4:76631549-76631568 MsG0480022783.01.T01:intron 40.0%
! CTAAGGCCTCTAAGAAATCT+TGG + Chr4:76630508-76630527 MsG0480022783.01.T01:intron 40.0%
! CTTTTGGTACACGGTACAAT+AGG + Chr4:76630151-76630170 MsG0480022783.01.T01:intron 40.0%
! GGGATTGATTTAGGTTTCAG+GGG + Chr4:76629196-76629215 MsG0480022783.01.T01:CDS 40.0%
! GGTTGGGGTACCAATAAATA+AGG - Chr4:76631660-76631679 None:intergenic 40.0%
! GTGGGATCACATTGATTGAT+AGG + Chr4:76628748-76628767 MsG0480022783.01.T01:CDS 40.0%
! TCAAGTCGCGTTGTTATTGT+GGG + Chr4:76631917-76631936 MsG0480022783.01.T01:intron 40.0%
!! AAGAAAGCACTTGAAGATGC+TGG + Chr4:76628897-76628916 MsG0480022783.01.T01:CDS 40.0%
!! AAGGTTTTCAAGAACCCTTC+TGG + Chr4:76631169-76631188 MsG0480022783.01.T01:CDS 40.0%
!! AAGTTTTATGTTGGCTGTCG+AGG + Chr4:76632391-76632410 MsG0480022783.01.T01:intron 40.0%
!! AGAGCCTTGCTATTAATAGC+CGG - Chr4:76632453-76632472 None:intergenic 40.0%
!! GGTGGATAAAAGAGGTGTTT+GGG + Chr4:76631939-76631958 MsG0480022783.01.T01:intron 40.0%
!! GTGGATAAAAGAGGTGTTTG+GGG + Chr4:76631940-76631959 MsG0480022783.01.T01:intron 40.0%
!! GTTCTGAAAGGCAAAATAGG+AGG - Chr4:76632032-76632051 None:intergenic 40.0%
!! TAAAGAACGTGCTGGTGTTT+TGG + Chr4:76629045-76629064 MsG0480022783.01.T01:CDS 40.0%
!! TGCAGTTGATTTTGATACCG+TGG + Chr4:76632104-76632123 MsG0480022783.01.T01:CDS 40.0%
!!! AGACCGTGATGGTTTTGTTA+TGG + Chr4:76629429-76629448 MsG0480022783.01.T01:CDS 40.0%
!!! CACAACCCTCTTTTTTCGTT+TGG + Chr4:76632419-76632438 MsG0480022783.01.T01:intron 40.0%
!!! GACCGTGATGGTTTTGTTAT+GGG + Chr4:76629430-76629449 MsG0480022783.01.T01:CDS 40.0%
!!! GATGGTTTTGTTATGGGTGA+AGG + Chr4:76629436-76629455 MsG0480022783.01.T01:CDS 40.0%
!!! GGCCTTTTTTTCTTTCTTCC+AGG + Chr4:76632240-76632259 MsG0480022783.01.T01:intron 40.0%
ACAAAACCCCCCAAACCAAT+AGG - Chr4:76629346-76629365 None:intergenic 45.0%
AGTGATCACAACACGCTTCT+TGG - Chr4:76628658-76628677 None:intergenic 45.0%
ATTCTGCACCAAAGAGACCA+AGG - Chr4:76632076-76632095 None:intergenic 45.0%
CATGCAACTTCCACTCTTGT+TGG + Chr4:76631118-76631137 MsG0480022783.01.T01:CDS 45.0%
CGAGCCCAAACGAAAAAAGA+GGG - Chr4:76632427-76632446 None:intergenic 45.0%
CTAAAACTGCTTCTAGGCCT+TGG + Chr4:76629401-76629420 MsG0480022783.01.T01:CDS 45.0%
GAACTGAACGGATCCCTAAT+TGG + Chr4:76628990-76629009 MsG0480022783.01.T01:intron 45.0%
GAGTAAGACAATACCTCCTC+GGG - Chr4:76629972-76629991 None:intergenic 45.0%
GTCAGGAATGGGTGGTTTAA+CGG + Chr4:76629072-76629091 MsG0480022783.01.T01:CDS 45.0%
GTGATCACAACACGCTTCTT+GGG - Chr4:76628657-76628676 None:intergenic 45.0%
TCTGCCACCTCTTGGAATAA+TGG + Chr4:76631557-76631576 MsG0480022783.01.T01:intron 45.0%
TGAAGCTGAATGGTGTGATG+AGG - Chr4:76628440-76628459 None:intergenic 45.0%
TGCTGCCAATCACATTCGTA+GGG + Chr4:76629273-76629292 MsG0480022783.01.T01:CDS 45.0%
TTGGGATCCTTCTCTCTTTG+AGG - Chr4:76628639-76628658 None:intergenic 45.0%
! AAGAAGCGTGTTGTGATCAC+TGG + Chr4:76628657-76628676 MsG0480022783.01.T01:CDS 45.0%
! ATCCTTCTCTCTTTGAGGAG+CGG - Chr4:76628634-76628653 None:intergenic 45.0%
! CAAGGCCTAGAAGCAGTTTT+AGG - Chr4:76629403-76629422 None:intergenic 45.0%
! CAAGTCGCGTTGTTATTGTG+GGG + Chr4:76631918-76631937 MsG0480022783.01.T01:intron 45.0%
! GGTTTAACGGTGTTTTCCGA+CGG + Chr4:76629085-76629104 MsG0480022783.01.T01:CDS 45.0%
! GTCAAGTCGCGTTGTTATTG+TGG + Chr4:76631916-76631935 MsG0480022783.01.T01:intron 45.0%
! TTTGTTATGGGTGAAGGTGC+TGG + Chr4:76629442-76629461 MsG0480022783.01.T01:CDS 45.0%
!! CTGGTATCGATATCAGTACC+AGG + Chr4:76630593-76630612 MsG0480022783.01.T01:intron 45.0%
!! GGGTGGATAAAAGAGGTGTT+TGG + Chr4:76631938-76631957 MsG0480022783.01.T01:intron 45.0%
!! TGAGGCCGATTTGATGATTG+CGG + Chr4:76629297-76629316 MsG0480022783.01.T01:CDS 45.0%
!! TTCCACTCTTGTTGGTGACT+TGG + Chr4:76631126-76631145 MsG0480022783.01.T01:CDS 45.0%
!!! AACGTGCTGGTGTTTTGGTT+GGG + Chr4:76629050-76629069 MsG0480022783.01.T01:CDS 45.0%
!!! AAGGTGCTGGAGTTTTGGTA+AGG + Chr4:76629455-76629474 MsG0480022783.01.T01:intron 45.0%
!!! CCTCTTTTTTCGTTTGGGCT+CGG + Chr4:76632425-76632444 MsG0480022783.01.T01:intron 45.0%
!!! CGGCATTGGAGGATTTTTTG+CGG - Chr4:76628548-76628567 None:intergenic 45.0%
!!! CTCTTTTTTCGTTTGGGCTC+GGG + Chr4:76632426-76632445 MsG0480022783.01.T01:intron 45.0%
!!! GTTTTGGTTGGGTCAGGAAT+GGG + Chr4:76629061-76629080 MsG0480022783.01.T01:CDS 45.0%
!!! TGTTTTGGTTGGGTCAGGAA+TGG + Chr4:76629060-76629079 MsG0480022783.01.T01:CDS 45.0%
!!! TTGGAGGATTTTTTGCGGAG+TGG - Chr4:76628543-76628562 None:intergenic 45.0%
AAAACAGGACACACGCGACA+TGG - Chr4:76629718-76629737 None:intergenic 50.0%
AACCCTCAGAGCTAAACCCA+CGG - Chr4:76628815-76628834 None:intergenic 50.0%
ACATCGACGGGAAGAATGAC+CGG + Chr4:76628835-76628854 MsG0480022783.01.T01:CDS 50.0%
AGACGACGGAGAGTCTCTTT+GGG - Chr4:76628593-76628612 None:intergenic 50.0%
ATGCAGCCACCCTGTTGTTA+TGG - Chr4:76631400-76631419 None:intergenic 50.0%
CAATCACATTCGTAGGGGTG+AGG + Chr4:76629279-76629298 MsG0480022783.01.T01:CDS 50.0%
CAATGTGATCCCACTCTCAC+CGG - Chr4:76628742-76628761 None:intergenic 50.0%
CACCTCTTGGAATAATGGCC+TGG + Chr4:76631562-76631581 MsG0480022783.01.T01:intron 50.0%
CAGGCCATTATTCCAAGAGG+TGG - Chr4:76631564-76631583 None:intergenic 50.0%
CCATCACGGTCTTTATCCCA+AGG - Chr4:76629421-76629440 None:intergenic 50.0%
CCCACCCGCAATCATCAAAT+CGG - Chr4:76629305-76629324 None:intergenic 50.0%
CCGAGCCCAAACGAAAAAAG+AGG - Chr4:76632428-76632447 None:intergenic 50.0%
CCTTGGGATAAAGACCGTGA+TGG + Chr4:76629418-76629437 MsG0480022783.01.T01:CDS 50.0%
CGTGTTGTGATCACTGGCAT+GGG + Chr4:76628663-76628682 MsG0480022783.01.T01:CDS 50.0%
CTCACCCCTACGAATGTGAT+TGG - Chr4:76629281-76629300 None:intergenic 50.0%
CTCGCTTCATGGCATGTTCA+AGG - Chr4:76629818-76629837 None:intergenic 50.0%
CTGCTGCCAATCACATTCGT+AGG + Chr4:76629272-76629291 MsG0480022783.01.T01:CDS 50.0%
CTTGAACATGCCATGAAGCG+AGG + Chr4:76629816-76629835 MsG0480022783.01.T01:CDS 50.0%
GACCAGGCCATTATTCCAAG+AGG - Chr4:76631567-76631586 None:intergenic 50.0%
GCTGCCAATCACATTCGTAG+GGG + Chr4:76629274-76629293 MsG0480022783.01.T01:CDS 50.0%
GGAGACAATCATCCTGTCTC+CGG - Chr4:76628857-76628876 None:intergenic 50.0%
GGAGACAGGATGATTGTCTC+CGG + Chr4:76628856-76628875 MsG0480022783.01.T01:CDS 50.0%
GGGACCGGCTATTAATAGCA+AGG + Chr4:76632446-76632465 MsG0480022783.01.T01:intron 50.0%
GTACACGGTACAATAGGGGA+TGG + Chr4:76630157-76630176 MsG0480022783.01.T01:intron 50.0%
TAAAGCTGTCTGCACACGGT+GGG + Chr4:76630364-76630383 MsG0480022783.01.T01:intron 50.0%
TGCCAAGTCACCAACAAGAG+TGG - Chr4:76631131-76631150 None:intergenic 50.0%
TGCGAACCGAGTAGGGAATT+TGG - Chr4:76628784-76628803 None:intergenic 50.0%
TGGCAATCAGGGTCTGAAAG+CGG - Chr4:76632316-76632335 None:intergenic 50.0%
TGTGGGAAGGAGTAGCACTA+TGG + Chr4:76630390-76630409 MsG0480022783.01.T01:intron 50.0%
TTCTACGAGAAGCTTCTCGC+CGG + Chr4:76628720-76628739 MsG0480022783.01.T01:CDS 50.0%
! AAATTCCCTACTCGGTTCGC+AGG + Chr4:76628783-76628802 MsG0480022783.01.T01:CDS 50.0%
! CCGATTTGATGATTGCGGGT+GGG + Chr4:76629302-76629321 MsG0480022783.01.T01:CDS 50.0%
! CGGTGCCGAAAATCTCGATA+AGG + Chr4:76628923-76628942 MsG0480022783.01.T01:CDS 50.0%
! CTGCTGCTTGACATTTGCCA+CGG - Chr4:76632124-76632143 None:intergenic 50.0%
! GCACTTGAAGATGCTGGTCT+CGG + Chr4:76628903-76628922 MsG0480022783.01.T01:CDS 50.0%
! TTTTTGCGGAGTGGTTCGAG+TGG - Chr4:76628534-76628553 None:intergenic 50.0%
!! AGCTCTGAGGGTTACATCGA+CGG + Chr4:76628822-76628841 MsG0480022783.01.T01:CDS 50.0%
!! ATCCGTGGGTTTAGCTCTGA+GGG + Chr4:76628810-76628829 MsG0480022783.01.T01:CDS 50.0%
!! GAGGCCGATTTGATGATTGC+GGG + Chr4:76629298-76629317 MsG0480022783.01.T01:CDS 50.0%
!! GATCCAAGATCTGATGGGCT+TGG + Chr4:76629900-76629919 MsG0480022783.01.T01:CDS 50.0%
!! TCTATGATAGGGCACTGCCT+TGG + Chr4:76631336-76631355 MsG0480022783.01.T01:CDS 50.0%
!!! GAACGTGCTGGTGTTTTGGT+TGG + Chr4:76629049-76629068 MsG0480022783.01.T01:CDS 50.0%
!!! GAGTCTCTTTGGGGTTTTGG+CGG - Chr4:76628583-76628602 None:intergenic 50.0%
!!! GGAGAGTCTCTTTGGGGTTT+TGG - Chr4:76628586-76628605 None:intergenic 50.0%
AAAGCTGTCTGCACACGGTG+GGG + Chr4:76630365-76630384 MsG0480022783.01.T01:intron 55.0%
ACGCCAAGCCCATCAGATCT+TGG - Chr4:76629906-76629925 None:intergenic 55.0%
AGCCGCTCCTCAAAGAGAGA+AGG + Chr4:76628629-76628648 MsG0480022783.01.T01:CDS 55.0%
ATCTGACCTGCGAACCGAGT+AGG - Chr4:76628792-76628811 None:intergenic 55.0%
ATGGGTGGCGTCACTGTACA+TGG + Chr4:76628681-76628700 MsG0480022783.01.T01:CDS 55.0%
CGGTACAATAGGGGATGGCA+TGG + Chr4:76630162-76630181 MsG0480022783.01.T01:intron 55.0%
GACGACGGAGAGTCTCTTTG+GGG - Chr4:76628592-76628611 None:intergenic 55.0%
GAGACGACGGAGAGTCTCTT+TGG - Chr4:76628594-76628613 None:intergenic 55.0%
GATAGGTGCACCTCGCTTCA+TGG - Chr4:76629829-76629848 None:intergenic 55.0%
GCGTGTTGTGATCACTGGCA+TGG + Chr4:76628662-76628681 MsG0480022783.01.T01:CDS 55.0%
GGAGTGGTTCGAGTGGTGAA+GGG - Chr4:76628527-76628546 None:intergenic 55.0%
GGCAGTGCCCTATCATAGAC+TGG - Chr4:76631335-76631354 None:intergenic 55.0%
GTAAAGCTGTCTGCACACGG+TGG + Chr4:76630363-76630382 MsG0480022783.01.T01:intron 55.0%
GTTGTGATCACTGGCATGGG+TGG + Chr4:76628666-76628685 MsG0480022783.01.T01:CDS 55.0%
TCGGATGTAAGGGGCCAAGT+TGG + Chr4:76630687-76630706 MsG0480022783.01.T01:intron 55.0%
TCTGACCTGCGAACCGAGTA+GGG - Chr4:76628791-76628810 None:intergenic 55.0%
TTGGTTGGGTCAGGAATGGG+TGG + Chr4:76629064-76629083 MsG0480022783.01.T01:CDS 55.0%
! CAGAGCAGTCTTGTAGACGC+CGG + Chr4:76629939-76629958 MsG0480022783.01.T01:CDS 55.0%
! GTCGCGTTGTTATTGTGGGG+TGG + Chr4:76631921-76631940 MsG0480022783.01.T01:intron 55.0%
! TGGTGGACACAACTCTGTCG+TGG + Chr4:76632284-76632303 MsG0480022783.01.T01:CDS 55.0%
! TTTTCGTTTGGGCTCGGGAC+CGG + Chr4:76632431-76632450 MsG0480022783.01.T01:intron 55.0%
!! GATCCGTGGGTTTAGCTCTG+AGG + Chr4:76628809-76628828 MsG0480022783.01.T01:CDS 55.0%
!! GCCGATTTGATGATTGCGGG+TGG + Chr4:76629301-76629320 MsG0480022783.01.T01:CDS 55.0%
!! GCTCTGAGGGTTACATCGAC+GGG + Chr4:76628823-76628842 MsG0480022783.01.T01:CDS 55.0%
!! TTGCAGAGGAGGCACCAACT+TGG - Chr4:76630704-76630723 None:intergenic 55.0%
!!! GCTGGTGTTTTGGTTGGGTC+AGG + Chr4:76629055-76629074 MsG0480022783.01.T01:CDS 55.0%
!!! GGGTGAAGGTGCTGGAGTTT+TGG + Chr4:76629450-76629469 MsG0480022783.01.T01:CDS 55.0%
!!! TCTCTTTGGGGTTTTGGCGG+TGG - Chr4:76628580-76628599 None:intergenic 55.0%
AAGCTTCTCGCCGGTGAGAG+TGG + Chr4:76628729-76628748 MsG0480022783.01.T01:CDS 60.0%
AGCTTCTCGCCGGTGAGAGT+GGG + Chr4:76628730-76628749 MsG0480022783.01.T01:CDS 60.0%
CGGAGTGGTTCGAGTGGTGA+AGG - Chr4:76628528-76628547 None:intergenic 60.0%
CGGCGTCTACAAGACTGCTC+TGG - Chr4:76629941-76629960 None:intergenic 60.0%
CGGGAAGAATGACCGGAGAC+AGG + Chr4:76628842-76628861 MsG0480022783.01.T01:CDS 60.0%
CTCCGGTACTGCAATGTCGC+CGG + Chr4:76628873-76628892 MsG0480022783.01.T01:CDS 60.0%
GGTGAAGGGCGGAGAGTGAA+GGG - Chr4:76628513-76628532 None:intergenic 60.0%
GGTTCGCAGGTCAGATCCGT+GGG + Chr4:76628796-76628815 MsG0480022783.01.T01:CDS 60.0%
GTGGTTCGAGTGGTGAAGGG+CGG - Chr4:76628524-76628543 None:intergenic 60.0%
TACCTCCTCGGGTGACACAC+CGG - Chr4:76629961-76629980 None:intergenic 60.0%
TCCCGGCGACATTGCAGTAC+CGG - Chr4:76628878-76628897 None:intergenic 60.0%
TCCGGTACTGCAATGTCGCC+GGG + Chr4:76628874-76628893 MsG0480022783.01.T01:CDS 60.0%
TGGTGAAGGGCGGAGAGTGA+AGG - Chr4:76628514-76628533 None:intergenic 60.0%
TTGAGGAGCGGCTGTGGTGA+CGG - Chr4:76628622-76628641 None:intergenic 60.0%
! CTCTCTTTGAGGAGCGGCTG+TGG - Chr4:76628628-76628647 None:intergenic 60.0%
!!! CTTTGGGGTTTTGGCGGTGG+TGG - Chr4:76628577-76628596 None:intergenic 60.0%
ACACGGTGGGGTGTGTGGGA+AGG + Chr4:76630377-76630396 MsG0480022783.01.T01:intron 65.0%
CGGTTCGCAGGTCAGATCCG+TGG + Chr4:76628795-76628814 MsG0480022783.01.T01:CDS 65.0%
CTGCACACGGTGGGGTGTGT+GGG + Chr4:76630373-76630392 MsG0480022783.01.T01:intron 65.0%
TCTGCACACGGTGGGGTGTG+TGG + Chr4:76630372-76630391 MsG0480022783.01.T01:intron 65.0%
! GGTGACGGCGGAAGAGACGA+CGG - Chr4:76628607-76628626 None:intergenic 65.0%
!! TGGGGTTTTGGCGGTGGTGG+TGG - Chr4:76628574-76628593 None:intergenic 65.0%
!!! GGTTTTGGCGGTGGTGGTGG+CGG - Chr4:76628571-76628590 None:intergenic 65.0%
AGACGCCGGTGTGTCACCCG+AGG + Chr4:76629953-76629972 MsG0480022783.01.T01:CDS 70.0%
CACTGCCTTGGCGCAGCTGG+GGG + Chr4:76631348-76631367 MsG0480022783.01.T01:CDS 70.0%
CCAAACCCCCAGCTGCGCCA+AGG - Chr4:76631356-76631375 None:intergenic 70.0%
CCTTGGCGCAGCTGGGGGTT+TGG + Chr4:76631353-76631372 MsG0480022783.01.T01:CDS 70.0%
GCACTGCCTTGGCGCAGCTG+GGG + Chr4:76631347-76631366 MsG0480022783.01.T01:CDS 70.0%
GGCACTGCCTTGGCGCAGCT+GGG + Chr4:76631346-76631365 MsG0480022783.01.T01:CDS 70.0%
!! AGGAGCGGCTGTGGTGACGG+CGG - Chr4:76628619-76628638 None:intergenic 70.0%
!! TTTGGCGGTGGTGGTGGCGG+CGG - Chr4:76628568-76628587 None:intergenic 70.0%
CGCCGGTGTGTCACCCGAGG+AGG + Chr4:76629956-76629975 MsG0480022783.01.T01:CDS 75.0%
! GGGCACTGCCTTGGCGCAGC+TGG + Chr4:76631345-76631364 MsG0480022783.01.T01:CDS 75.0%
!! GGTGGTGGCGGCGGCATTGG+AGG - Chr4:76628559-76628578 None:intergenic 75.0%
!! GGTGGTGGTGGCGGCGGCAT+TGG - Chr4:76628562-76628581 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 76628366 76632875 76628366 ID=MsG0480022783.01;Name=MsG0480022783.01
Chr4 mRNA 76628366 76632875 76628366 ID=MsG0480022783.01.T01;Parent=MsG0480022783.01;Name=MsG0480022783.01.T01;_AED=0.31;_eAED=0.31;_QI=120|1|1|1|0.75|0.66|9|351|471
Chr4 exon 76628366 76628944 76628366 ID=MsG0480022783.01.T01:exon:8560;Parent=MsG0480022783.01.T01
Chr4 exon 76629040 76629471 76629040 ID=MsG0480022783.01.T01:exon:8561;Parent=MsG0480022783.01.T01
Chr4 exon 76629804 76629977 76629804 ID=MsG0480022783.01.T01:exon:8562;Parent=MsG0480022783.01.T01
Chr4 exon 76631100 76631213 76631100 ID=MsG0480022783.01.T01:exon:8563;Parent=MsG0480022783.01.T01
Chr4 exon 76631336 76631437 76631336 ID=MsG0480022783.01.T01:exon:8564;Parent=MsG0480022783.01.T01
Chr4 exon 76632093 76632159 76632093 ID=MsG0480022783.01.T01:exon:8565;Parent=MsG0480022783.01.T01
Chr4 exon 76632262 76632353 76632262 ID=MsG0480022783.01.T01:exon:8566;Parent=MsG0480022783.01.T01
Chr4 exon 76632477 76632525 76632477 ID=MsG0480022783.01.T01:exon:8567;Parent=MsG0480022783.01.T01
Chr4 exon 76632598 76632875 76632598 ID=MsG0480022783.01.T01:exon:8568;Parent=MsG0480022783.01.T01
Chr4 five_prime_UTR 76628366 76628485 76628366 ID=MsG0480022783.01.T01:five_prime_utr;Parent=MsG0480022783.01.T01
Chr4 CDS 76628486 76628944 76628486 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 CDS 76629040 76629471 76629040 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 CDS 76629804 76629977 76629804 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 CDS 76631100 76631213 76631100 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 CDS 76631336 76631437 76631336 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 CDS 76632093 76632159 76632093 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 CDS 76632262 76632329 76632262 ID=MsG0480022783.01.T01:cds;Parent=MsG0480022783.01.T01
Chr4 three_prime_UTR 76632330 76632353 76632330 ID=MsG0480022783.01.T01:three_prime_utr;Parent=MsG0480022783.01.T01
Chr4 three_prime_UTR 76632477 76632525 76632477 ID=MsG0480022783.01.T01:three_prime_utr;Parent=MsG0480022783.01.T01
Chr4 three_prime_UTR 76632598 76632875 76632598 ID=MsG0480022783.01.T01:three_prime_utr;Parent=MsG0480022783.01.T01
Gene Sequence

>MsG0480022783.01.T01

ATGCAATCACTTCAGCATCAACTACCCTTCACTCTCCGCCCTTCACCACTCGAACCACTCCGCAAAAAATCCTCCAATGCCGCCGCCACCACCACCGCCAAAACCCCAAAGAGACTCTCCGTCGTCTCTTCCGCCGTCACCACAGCCGCTCCTCAAAGAGAGAAGGATCCCAAGAAGCGTGTTGTGATCACTGGCATGGGTGGCGTCACTGTACATGGCAACGACGTCGACATTTTCTACGAGAAGCTTCTCGCCGGTGAGAGTGGGATCACATTGATTGATAGGTTTGATGCTTCCAAATTCCCTACTCGGTTCGCAGGTCAGATCCGTGGGTTTAGCTCTGAGGGTTACATCGACGGGAAGAATGACCGGAGACAGGATGATTGTCTCCGGTACTGCAATGTCGCCGGGAAGAAAGCACTTGAAGATGCTGGTCTCGGTGCCGAAAATCTCGATAAGATTGATAAAGAACGTGCTGGTGTTTTGGTTGGGTCAGGAATGGGTGGTTTAACGGTGTTTTCCGACGGAGTTAAGAATCTGATTGAAAAGGGACATAGAAAGATATCACCTTTTTTTATTCCTTATGCTATTACAAATATGGCTTCAGCTTTACTTGGGATTGATTTAGGTTTCAGGGGTCCAAATTATTCTATTTCAACTGCTTGTGCTACTTCAAATTATTGTTTTGTTGCTGCTGCCAATCACATTCGTAGGGGTGAGGCCGATTTGATGATTGCGGGTGGGACTGAAGCTGCCATTATTCCTATTGGTTTGGGGGGTTTTGTTGCTTGCAGAGCACTTTCTCAGAGAAATGATGACCCTAAAACTGCTTCTAGGCCTTGGGATAAAGACCGTGATGGTTTTGTTATGGGTGAAGGTGCTGGAGTTTTGGTGATGGAAAGCCTTGAACATGCCATGAAGCGAGGTGCACCTATCATTGCTGAATACTTGGGAGGTGCTGTTAACTGTGATGCTTATCACATGACTGATCCAAGATCTGATGGGCTTGGCGTGTCTTCATGCATCCAGAGCAGTCTTGTAGACGCCGGTGTGTCACCCGAGGAGGTCAATTACATAAATGCACATGCAACTTCCACTCTTGTTGGTGACTTGGCAGAGATTAATGCTATCAAAAAGGTTTTCAAGAACCCTTCTGGCATCAAAATTAATGCCACCAAGTCTATGATAGGGCACTGCCTTGGCGCAGCTGGGGGTTTGGAAGCTATTGCCACAATAAAAGCCATAACAACAGGGTGGCTGCATCCATCAATCAATCAATTCAATCCAGAACCTGCAGTTGATTTTGATACCGTGGCAAATGTCAAGCAGCAGCATGAAATTAATGTTGGCATTTCAAATTCTTTTGGATTTGGTGGACACAACTCTGTCGTGGCTTTTTCCGCTTTCAGACCCTGA
Protein sequence

>MsG0480022783.01.T01

MQSLQHQLPFTLRPSPLEPLRKKSSNAAATTTAKTPKRLSVVSSAVTTAAPQREKDPKKRVVITGMGGVTVHGNDVDIFYEKLLAGESGITLIDRFDASKFPTRFAGQIRGFSSEGYIDGKNDRRQDDCLRYCNVAGKKALEDAGLGAENLDKIDKERAGVLVGSGMGGLTVFSDGVKNLIEKGHRKISPFFIPYAITNMASALLGIDLGFRGPNYSISTACATSNYCFVAAANHIRRGEADLMIAGGTEAAIIPIGLGGFVACRALSQRNDDPKTASRPWDKDRDGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRSDGLGVSSCIQSSLVDAGVSPEEVNYINAHATSTLVGDLAEINAIKKVFKNPSGIKINATKSMIGHCLGAAGGLEAIATIKAITTGWLHPSINQFNPEPAVDFDTVANVKQQHEINVGISNSFGFGGHNSVVAFSAFRP*