AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017331.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017331.01.T01 MTR_3g105440 87.885 520 20 2 1 512 1 485 0.0 919
MsG0380017331.01.T01 MTR_3g105440 87.885 520 20 2 1 512 1 485 0.0 917
MsG0380017331.01.T01 MTR_4g068110 37.331 517 258 9 9 512 16 479 3.30e-100 312
MsG0380017331.01.T01 MTR_4g068110 37.331 517 258 9 9 512 16 479 1.62e-99 311
MsG0380017331.01.T01 MTR_1g026540 30.467 407 218 11 10 396 15 376 8.26e-42 156
MsG0380017331.01.T01 MTR_1g026540 31.392 309 159 8 105 396 15 287 2.75e-35 136
MsG0380017331.01.T01 MTR_2g073240 26.978 278 147 10 1 266 13 246 1.11e-11 67.8
MsG0380017331.01.T01 MTR_0034s0060 26.071 280 147 10 1 266 131 364 4.75e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017331.01.T01 AT2G26260 63.391 519 145 3 2 512 5 486 0.0 677
MsG0380017331.01.T01 AT1G47290 63.080 474 128 3 6 476 9 438 0.0 616
MsG0380017331.01.T01 AT1G47290 68.250 400 92 1 6 405 9 373 0.0 578
MsG0380017331.01.T01 AT2G26260 62.963 432 115 3 89 512 1 395 0.0 554
MsG0380017331.01.T01 AT2G43420 38.252 515 259 7 9 512 15 481 1.62e-110 340
MsG0380017331.01.T01 AT2G33630 29.412 408 224 9 10 399 15 376 2.34e-37 144
MsG0380017331.01.T01 AT1G78570 26.978 278 147 10 1 266 1 234 6.38e-13 71.6
MsG0380017331.01.T01 AT1G53500 26.199 271 140 10 10 266 12 236 6.81e-11 65.5

Find 187 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTGCAGAAGGGAATAAT+TGG 0.171596 3:-95040594 MsG0380017331.01.T01:CDS
CTTTGAAGTAACAAACTTCT+TGG 0.203034 3:+95040185 None:intergenic
TGCCGATGCCCTTGCTTATA+TGG 0.210050 3:-95039830 MsG0380017331.01.T01:three_prime_UTR
CGTCCTACCTTCTCTACTTT+CGG 0.230913 3:-95045647 MsG0380017331.01.T01:five_prime_UTR
GGCATATTTCATTACGAATA+TGG 0.231821 3:-95043533 MsG0380017331.01.T01:CDS
TCTGCTCGTTCTTAGCTTCC+TGG 0.240047 3:-95040447 MsG0380017331.01.T01:three_prime_UTR
ATGAACTCCCAAAACTTTAT+AGG 0.247483 3:+95043508 None:intergenic
GGAGTTCATGTCTCTAATTT+TGG 0.253874 3:-95043494 MsG0380017331.01.T01:CDS
TTCCAGACTGCATTTGATTA+TGG 0.254715 3:-95045593 MsG0380017331.01.T01:exon
TAAAATTAAGTGCCGTGATA+TGG 0.259212 3:-95044428 MsG0380017331.01.T01:CDS
GTTTACCACAGGAACAAAAT+TGG 0.259515 3:-95044487 MsG0380017331.01.T01:intron
TATGACCCATGTCATGTTAC+AGG 0.265492 3:+95039668 None:intergenic
GTCCTACCTTCTCTACTTTC+GGG 0.300281 3:-95045646 MsG0380017331.01.T01:five_prime_UTR
ATATGGAACCTATAAAGTTT+TGG 0.301633 3:-95043516 MsG0380017331.01.T01:CDS
ATGTTGTTCTTACCTGCTTT+TGG 0.304167 3:-95044596 MsG0380017331.01.T01:intron
AACAAACCTCAACTCTTAAA+AGG 0.319878 3:-95045361 MsG0380017331.01.T01:intron
CTTTCTCAGTTGCCTCATCT+TGG 0.333806 3:-95040641 MsG0380017331.01.T01:CDS
CTGTGTCCGCATCGCCGATT+TGG 0.334227 3:-95045479 MsG0380017331.01.T01:CDS
TAGTTGTTTATAGAAGAATT+TGG 0.351116 3:+95045227 None:intergenic
GGATTGGTTATTAAGGCTAA+TGG 0.351234 3:-95044732 MsG0380017331.01.T01:CDS
GGGTGAGGGATTGGTTATTA+AGG 0.352725 3:-95044739 MsG0380017331.01.T01:CDS
CTTGAACCCTCTGAGCAATT+AGG 0.355569 3:-95045442 MsG0380017331.01.T01:CDS
TTCTCTTACCAGTTCATTGT+TGG 0.367722 3:-95044316 MsG0380017331.01.T01:intron
GCCGATGCCCTTGCTTATAT+GGG 0.368385 3:-95039829 MsG0380017331.01.T01:three_prime_UTR
TATCATGCCAATTGCACATT+TGG 0.370214 3:-95042418 MsG0380017331.01.T01:CDS
ACCTGGGAAGCTATTTAGAT+TGG 0.370608 3:-95039894 MsG0380017331.01.T01:three_prime_UTR
GACGGTTCCATCACCATTTA+CGG 0.371919 3:-95045766 MsG0380017331.01.T01:five_prime_UTR
CTTAAGAACTTGTATACTAT+AGG 0.373557 3:-95040413 MsG0380017331.01.T01:intron
AGAGATATCGCAGCCGTAAA+TGG 0.375439 3:+95045753 None:intergenic
ACTCCTATCGGGAATTTAAT+CGG 0.378975 3:-95039855 MsG0380017331.01.T01:three_prime_UTR
TTAATCTCTGCAGCATTTGA+AGG 0.382000 3:-95045278 MsG0380017331.01.T01:intron
TCGATCGGTTTATTCATTCA+TGG 0.385542 3:-95041069 MsG0380017331.01.T01:CDS
GGAATTCATGGAATTCATAA+TGG 0.386447 3:-95045015 MsG0380017331.01.T01:CDS
TTACTTCAAAGATTGATTGA+TGG 0.390041 3:-95040173 MsG0380017331.01.T01:three_prime_UTR
TGCTTCACCTTCAACATTGA+CGG 0.391665 3:+95045190 None:intergenic
TATAGGCTGCTTGGCCCATA+TGG 0.393052 3:-95042384 MsG0380017331.01.T01:CDS
TCCAAAGCTTCTGTATATCT+TGG 0.393295 3:-95041805 MsG0380017331.01.T01:CDS
TTAAAATTTGTCACTCCTAT+CGG 0.395432 3:-95039867 MsG0380017331.01.T01:three_prime_UTR
CAATAATTGTACAATGATAC+AGG 0.395876 3:+95040071 None:intergenic
TCCAAGATATACAGAAGCTT+TGG 0.397177 3:+95041804 None:intergenic
CACTCCACCAAATGTGCAAT+TGG 0.401026 3:+95042411 None:intergenic
GTGAAACAGATTAGAGCAAT+TGG 0.405052 3:+95045847 None:intergenic
TGAGGCACCTTCATTCCATA+TGG 0.412154 3:+95042369 None:intergenic
GATGTGAGTCTTATTCTTGA+AGG 0.416433 3:+95042339 None:intergenic
CATCATTCCGTCAATGTTGA+AGG 0.420093 3:-95045197 MsG0380017331.01.T01:intron
CATGCCAATTGCACATTTGG+TGG 0.425591 3:-95042415 MsG0380017331.01.T01:CDS
TGTGTCCGCATCGCCGATTT+GGG 0.426692 3:-95045478 MsG0380017331.01.T01:CDS
TAAACTGTTGGTGCCTTCAT+TGG 0.429069 3:-95044652 MsG0380017331.01.T01:CDS
TCTGAGCAATTAGGTCTTCT+CGG 0.432974 3:-95045433 MsG0380017331.01.T01:CDS
GATTGGTTATTAAGGCTAAT+GGG 0.435448 3:-95044731 MsG0380017331.01.T01:CDS
ATGTGATTGGTGATAATCTT+TGG 0.437500 3:-95039806 MsG0380017331.01.T01:three_prime_UTR
TTGGTTGATGCTGCAAAGGC+AGG 0.438220 3:-95044633 MsG0380017331.01.T01:CDS
CTCAGAGGGTTCAAGTTCAA+TGG 0.441397 3:+95045450 None:intergenic
CGGACACACACGAAAGAGTA+AGG 0.444460 3:+95045790 None:intergenic
AAGAATTTGGAGCAGCCATA+TGG 0.444848 3:+95045240 None:intergenic
ATCGTTGCCTTATCCACCTT+CGG 0.448632 3:-95044986 MsG0380017331.01.T01:intron
ATTTGGTGGAGTGGATATAT+AGG 0.449440 3:-95042401 MsG0380017331.01.T01:CDS
CAGAACCTGTAGAGGTATGA+TGG 0.450369 3:+95042263 None:intergenic
TAAAATTTGTCACTCCTATC+GGG 0.453788 3:-95039866 MsG0380017331.01.T01:three_prime_UTR
AGCAGCAAAGCCTCGTCCTC+CGG 0.454833 3:+95045540 None:intergenic
CTGCTCGTTCTTAGCTTCCT+GGG 0.460258 3:-95040446 MsG0380017331.01.T01:three_prime_UTR
ATACAAGTTCTTAAGTGAAA+AGG 0.460456 3:+95040421 None:intergenic
CCTGGGAAGCTATTTAGATT+GGG 0.461171 3:-95039893 MsG0380017331.01.T01:three_prime_UTR
TACCAGTTCATTGTTGGTGA+TGG 0.464034 3:-95044310 MsG0380017331.01.T01:intron
TTCAATGGTGGATCCCAAAT+CGG 0.464651 3:+95045465 None:intergenic
AAAGAGAGCTTAAAATGTTG+TGG 0.465718 3:-95039936 MsG0380017331.01.T01:three_prime_UTR
TAAAGCCGAGGGTGAGGGAT+TGG 0.474854 3:-95044748 MsG0380017331.01.T01:CDS
TTTGATTATGGCGGCGGCGG+AGG 0.475500 3:-95045581 MsG0380017331.01.T01:exon
GTAGGTACCGAAGGTGGATA+AGG 0.477922 3:+95044979 None:intergenic
CCCAATCTAAATAGCTTCCC+AGG 0.481548 3:+95039893 None:intergenic
GTATATCTTGGAAGTGGAAG+AGG 0.485555 3:-95041793 MsG0380017331.01.T01:intron
CGCCATAATCAAATGCAGTC+TGG 0.486266 3:+95045591 None:intergenic
AGCAACTAAAGCCGAGGGTG+AGG 0.494138 3:-95044754 MsG0380017331.01.T01:CDS
TTGCTTATATGGGATGTGAT+TGG 0.498625 3:-95039819 MsG0380017331.01.T01:three_prime_UTR
GGCTTGCAGTTGGTGAATCT+CGG 0.500925 3:+95045686 None:intergenic
CTTAAAATGTTGTGGGTTGG+AGG 0.501325 3:-95039928 MsG0380017331.01.T01:three_prime_UTR
AGGTTTGTTGCGAAGATCGA+CGG 0.502657 3:+95045375 None:intergenic
TGCACCCATCATACCTCTAC+AGG 0.507092 3:-95042268 MsG0380017331.01.T01:intron
GCATTTGATTATGGCGGCGG+CGG 0.508585 3:-95045584 MsG0380017331.01.T01:exon
GAAAGGTGGTGTGTGGTCAC+CGG 0.510184 3:-95045559 MsG0380017331.01.T01:CDS
AAGATATACAGAAGCTTTGG+AGG 0.510237 3:+95041807 None:intergenic
TCGAATCATATCCACATTTG+AGG 0.511233 3:-95041863 MsG0380017331.01.T01:CDS
GAGCTTAAAATGTTGTGGGT+TGG 0.511327 3:-95039931 MsG0380017331.01.T01:three_prime_UTR
TGTGTGGTCACCGGAGGACG+AGG 0.512379 3:-95045550 MsG0380017331.01.T01:CDS
GCGATATCTCTCCTCACAAA+AGG 0.515045 3:-95045741 MsG0380017331.01.T01:five_prime_UTR
AAGAGAGCTTAAAATGTTGT+GGG 0.515659 3:-95039935 MsG0380017331.01.T01:three_prime_UTR
ATGTGAGTCTTATTCTTGAA+GGG 0.515692 3:+95042340 None:intergenic
GCTTCTGTATATCTTGGAAG+TGG 0.518379 3:-95041799 MsG0380017331.01.T01:CDS
TTGAGAAAATGCCCACATCA+TGG 0.518767 3:-95040698 MsG0380017331.01.T01:CDS
GCAACTAAAGCCGAGGGTGA+GGG 0.520116 3:-95044753 MsG0380017331.01.T01:CDS
TTTGCAGCATCAACCAATGA+AGG 0.520481 3:+95044639 None:intergenic
TGCAGCATTTGAAGGAGTTG+AGG 0.521031 3:-95045270 MsG0380017331.01.T01:intron
CCAATTATTCCCTTCTGCAA+GGG 0.522767 3:+95040594 None:intergenic
CCCAATTATTCCCTTCTGCA+AGG 0.526936 3:+95040593 None:intergenic
ACTGCATTTGATTATGGCGG+CGG 0.527486 3:-95045587 MsG0380017331.01.T01:exon
GAGCTCGATCAGCACATATG+TGG 0.527742 3:+95044242 None:intergenic
TGGAGGTTGATTGATAAACC+TGG 0.528757 3:-95039911 MsG0380017331.01.T01:three_prime_UTR
TGGAAGGTCTTGGATATCAA+AGG 0.529691 3:-95043474 MsG0380017331.01.T01:intron
ATCAAACATTTACCAAAAGC+AGG 0.534434 3:+95044584 None:intergenic
CCTTGCAGAAGGGAATAATT+GGG 0.540074 3:-95040593 MsG0380017331.01.T01:CDS
TTATGGCGGCGGCGGAGGAA+AGG 0.542684 3:-95045576 MsG0380017331.01.T01:CDS
TGGCGGCGGCGGAGGAAAGG+TGG 0.543511 3:-95045573 MsG0380017331.01.T01:CDS
TGCATTAAATCCCTTGCAGA+AGG 0.546868 3:-95040604 MsG0380017331.01.T01:CDS
CGAATCATATCCACATTTGA+GGG 0.546936 3:-95041862 MsG0380017331.01.T01:CDS
CTTCTATTATACTCATCGAT+CGG 0.547051 3:-95041084 MsG0380017331.01.T01:CDS
CAGACTGCATTTGATTATGG+CGG 0.547350 3:-95045590 MsG0380017331.01.T01:exon
CATCTTCATTTAATCCACGT+TGG 0.548065 3:-95040099 MsG0380017331.01.T01:three_prime_UTR
TTCATTGGTTGATGCTGCAA+AGG 0.548711 3:-95044637 MsG0380017331.01.T01:CDS
TAGGGCGTATGCAACATGTC+AGG 0.552269 3:+95044697 None:intergenic
ATTGGCATGATAACAAAGAC+AGG 0.553368 3:+95042429 None:intergenic
GTAGAAAGCTGTAAATGCTA+AGG 0.553726 3:+95040290 None:intergenic
GAGTGGATATATAGGCTGCT+TGG 0.554338 3:-95042393 MsG0380017331.01.T01:CDS
GGACACAGTAGGTGTTCAAT+CGG 0.555516 3:+95045494 None:intergenic
AAGACAGGGATCTTTATGCT+TGG 0.556912 3:+95042444 None:intergenic
GCAGTCTGGAAGGTTAGTTA+TGG 0.557136 3:+95045605 None:intergenic
TTGAGCAAACATGACTCAAA+GGG 0.557166 3:+95039780 None:intergenic
TGTAAACTTGCTCGGAGTAG+AGG 0.558240 3:-95040003 MsG0380017331.01.T01:three_prime_UTR
GGTAAGAACAACATCTACCT+TGG 0.559093 3:+95044605 None:intergenic
CTTTGTAAGAGCAGTAATGA+AGG 0.563257 3:+95041107 None:intergenic
ATCGCAGCCGTAAATGGTGA+TGG 0.564493 3:+95045759 None:intergenic
TCTTTCGTGTGTGTCCGCGA+CGG 0.564998 3:-95045784 MsG0380017331.01.T01:five_prime_UTR
TCTTAAGTGAAAAGGCTCCC+AGG 0.566172 3:+95040429 None:intergenic
GCGCCGCTGAGGCTTGCAGT+TGG 0.573654 3:+95045676 None:intergenic
TGGACCTGGTGATAAACTGT+TGG 0.573810 3:-95044664 MsG0380017331.01.T01:CDS
GCTTGGCCCATATGGAATGA+AGG 0.577124 3:-95042376 MsG0380017331.01.T01:CDS
TTTCACATATGTTGAAAATG+TGG 0.577379 3:-95044272 MsG0380017331.01.T01:CDS
TCAAAACCTGTAACATGACA+TGG 0.578204 3:-95039674 MsG0380017331.01.T01:three_prime_UTR
GAGGCACCTTCATTCCATAT+GGG 0.580167 3:+95042370 None:intergenic
TTTGAGCAAACATGACTCAA+AGG 0.583449 3:+95039779 None:intergenic
AGAAGACCTAATTGCTCAGA+GGG 0.584128 3:+95045436 None:intergenic
TCAACTTAAGTCTAAAGAGA+AGG 0.584547 3:-95041832 MsG0380017331.01.T01:CDS
TGATTGGTGATAATCTTTGG+CGG 0.587522 3:-95039803 MsG0380017331.01.T01:three_prime_UTR
GGCGGAGGAAAGGTGGTGTG+TGG 0.587912 3:-95045566 MsG0380017331.01.T01:CDS
CACAGCAAAATTCCAAGATG+AGG 0.589243 3:+95040629 None:intergenic
TGATCGAGCTCTAGCTTCAG+AGG 0.590757 3:-95044230 MsG0380017331.01.T01:CDS
TGTGAGTCTTATTCTTGAAG+GGG 0.592528 3:+95042341 None:intergenic
AGAACCTGTAGAGGTATGAT+GGG 0.594321 3:+95042264 None:intergenic
TCCCATATAAGCAAGGGCAT+CGG 0.596230 3:+95039828 None:intergenic
AGCTCGATCAGCACATATGT+GGG 0.596317 3:+95044243 None:intergenic
GGAGGTTGATTGATAAACCT+GGG 0.598447 3:-95039910 MsG0380017331.01.T01:three_prime_UTR
GTATGATGGGTGCATAGTCA+AGG 0.599231 3:+95042277 None:intergenic
CATTGACGGAATGATGAAGC+TGG 0.600987 3:+95045204 None:intergenic
TCACCAACTGCAAGCCTCAG+CGG 0.601878 3:-95045679 MsG0380017331.01.T01:five_prime_UTR
GGACGTGGATCGCGCCGCTG+AGG 0.602311 3:+95045665 None:intergenic
GGAGACATATTGAGCACGAC+CGG 0.604728 3:+95045396 None:intergenic
AATAACCAATCCCTCACCCT+CGG 0.605731 3:+95044743 None:intergenic
TTACTCAGCAACTAAAGCCG+AGG 0.607635 3:-95044760 MsG0380017331.01.T01:CDS
ATTCTTGAAGGGGTCAGCTG+AGG 0.610389 3:+95042351 None:intergenic
ATAATCAAATGCAGTCTGGA+AGG 0.612641 3:+95045595 None:intergenic
AGGTGGTGTGTGGTCACCGG+AGG 0.612663 3:-95045556 MsG0380017331.01.T01:CDS
TGGTTGATGCTGCAAAGGCA+GGG 0.613832 3:-95044632 MsG0380017331.01.T01:CDS
CTCGGTCAAGCTTTACACTC+CGG 0.614278 3:-95045415 MsG0380017331.01.T01:CDS
AATCACATCCCATATAAGCA+AGG 0.615558 3:+95039821 None:intergenic
ATTAAGGCTAATGGGACTAG+TGG 0.621571 3:-95044723 MsG0380017331.01.T01:CDS
GAGAAGACCTAATTGCTCAG+AGG 0.625054 3:+95045435 None:intergenic
ATCACATCCCATATAAGCAA+GGG 0.625681 3:+95039822 None:intergenic
TGGCAAAGGCTCCTTTGAGT+CGG 0.625999 3:-95039702 MsG0380017331.01.T01:three_prime_UTR
CAATTGCACATTTGGTGGAG+TGG 0.628998 3:-95042410 MsG0380017331.01.T01:CDS
AGAGGGTTCAAGTTCAATGG+TGG 0.630912 3:+95045453 None:intergenic
AAACCGATTAAATTCCCGAT+AGG 0.632453 3:+95039852 None:intergenic
GGCACCAACAGTTTATCACC+AGG 0.633574 3:+95044660 None:intergenic
AAAGTAGAGAAGGTAGGACG+TGG 0.634271 3:+95045650 None:intergenic
CGGACACCCGAAAGTAGAGA+AGG 0.635370 3:+95045640 None:intergenic
TACTCAGCAACTAAAGCCGA+GGG 0.636180 3:-95044759 MsG0380017331.01.T01:CDS
GATCGAGCTCTAGCTTCAGA+GGG 0.640107 3:-95044229 MsG0380017331.01.T01:CDS
GGTAAAGTAGGTACCGAAGG+TGG 0.641463 3:+95044973 None:intergenic
GCATTAAATCCCTTGCAGAA+GGG 0.643912 3:-95040603 MsG0380017331.01.T01:CDS
AAAGGCGACTGTCGTCGCAA+CGG 0.646567 3:-95045723 MsG0380017331.01.T01:five_prime_UTR
AAACGTCACAGAACCTGTAG+AGG 0.648903 3:+95042255 None:intergenic
TGATAAGTGAAACCATGATG+TGG 0.662199 3:+95040686 None:intergenic
AGATATACAGAAGCTTTGGA+GGG 0.663079 3:+95041808 None:intergenic
ATCGGCGATGCGGACACAGT+AGG 0.665728 3:+95045483 None:intergenic
GGACACACACGAAAGAGTAA+GGG 0.672386 3:+95045791 None:intergenic
AGTTATGGATCACAGAGTCA+CGG 0.675946 3:+95045620 None:intergenic
TGCAAAGGCAGGGAAATCCA+AGG 0.678227 3:-95044622 MsG0380017331.01.T01:CDS
TGGATCCCAAATCGGCGATG+CGG 0.678949 3:+95045473 None:intergenic
GATAAGTGAAACCATGATGT+GGG 0.683459 3:+95040687 None:intergenic
CAAAACCTGTAACATGACAT+GGG 0.684151 3:-95039673 MsG0380017331.01.T01:three_prime_UTR
AATAATTGTACAATGATACA+GGG 0.693390 3:+95040072 None:intergenic
CACCCGAAAGTAGAGAAGGT+AGG 0.702534 3:+95045644 None:intergenic
TCTTGCAGGAGGGCATACGG+AGG 0.702619 3:-95041890 MsG0380017331.01.T01:intron
GCAGTTGGTGAATCTCGGTG+CGG 0.718655 3:+95045691 None:intergenic
AAATGGTGATGGAACCGTCG+CGG 0.723389 3:+95045770 None:intergenic
TTGGCATGATAACAAAGACA+GGG 0.735805 3:+95042430 None:intergenic
TGATGGGTGCATAGTCAAGG+CGG 0.737283 3:+95042280 None:intergenic
TGCTATGAAGACTAACAATG+TGG 0.759479 3:+95041161 None:intergenic
TGATACAGGGAATTCCAACG+TGG 0.825223 3:+95040085 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAATATAACATAATTA+TGG - Chr3:95042959-95042978 MsG0380017331.01.T01:intron 10.0%
!!! ATTATGTTATATTAGTTTAT+TGG + Chr3:95042957-95042976 None:intergenic 10.0%
!!! TTCTATTTTTTAATGAAATA+AGG - Chr3:95042910-95042929 MsG0380017331.01.T01:intron 10.0%
!! AAACAATGTTAATATGTTAA+AGG - Chr3:95041466-95041485 MsG0380017331.01.T01:intron 15.0%
!! ACTGTATATTATCTTTAAAT+AGG + Chr3:95044589-95044608 None:intergenic 15.0%
!! ATAAATCATCAATTAAAGAA+AGG + Chr3:95041133-95041152 None:intergenic 15.0%
!! ATATAATTTAATCTAGCTAT+TGG - Chr3:95040621-95040640 MsG0380017331.01.T01:CDS 15.0%
!! GATATTAAAAAAAAAAACGT+TGG - Chr3:95043872-95043891 MsG0380017331.01.T01:intron 15.0%
!! TATAATTTAATCTAGCTATT+GGG - Chr3:95040622-95040641 MsG0380017331.01.T01:CDS 15.0%
!!! TTTAATTTCATTTTTTGCTT+AGG + Chr3:95042216-95042235 None:intergenic 15.0%
!!! TTTTTAAAATCACATACTTT+TGG - Chr3:95045242-95045261 MsG0380017331.01.T01:CDS 15.0%
!! AAAGATAATAATTAATAGCC+AGG + Chr3:95042508-95042527 None:intergenic 20.0%
!! AACTCTTAAAGTTCAAATTT+CGG - Chr3:95044064-95044083 MsG0380017331.01.T01:intron 20.0%
!! AATAATTGTACAATGATACA+GGG + Chr3:95045404-95045423 None:intergenic 20.0%
!! AATCCAAATAAGCTATAAAT+AGG + Chr3:95042555-95042574 None:intergenic 20.0%
!! ACCAAAACAAAATAACAAAA+AGG + Chr3:95043760-95043779 None:intergenic 20.0%
!! ATCATGGTGTTTATTAAATA+AGG + Chr3:95042787-95042806 None:intergenic 20.0%
!! TAATTAAGCATATATTGAGT+AGG + Chr3:95042743-95042762 None:intergenic 20.0%
!! TAGTTGTTTATAGAAGAATT+TGG + Chr3:95040249-95040268 None:intergenic 20.0%
!! TGAAATAAGGAATACATTTA+CGG - Chr3:95042923-95042942 MsG0380017331.01.T01:intron 20.0%
!! TGTTCTTCATGTTTAATTAA+GGG - Chr3:95043549-95043568 MsG0380017331.01.T01:intron 20.0%
!! TTGTTAAACTTAGTTAGATT+CGG - Chr3:95041807-95041826 MsG0380017331.01.T01:CDS 20.0%
!! TTTCTACGTTTATGAAAAAA+AGG - Chr3:95045199-95045218 MsG0380017331.01.T01:CDS 20.0%
!!! AATTAAGTTGTTTATCCAAT+TGG - Chr3:95042758-95042777 MsG0380017331.01.T01:intron 20.0%
!!! GATGATAAATACTTTTTTGT+AGG - Chr3:95041919-95041938 MsG0380017331.01.T01:intron 20.0%
!!! GTTTTATTCCATAATATTGA+AGG - Chr3:95042403-95042422 MsG0380017331.01.T01:CDS 20.0%
!!! TAACTTTCATTTTTTTGACT+TGG - Chr3:95040535-95040554 MsG0380017331.01.T01:intron 20.0%
!!! TTTAGACTTAAGTTGATTTT+CGG + Chr3:95043637-95043656 None:intergenic 20.0%
! AAACTCAAAAAAACATCTAC+TGG + Chr3:95045444-95045463 None:intergenic 25.0%
! AAAGGTAGAAACATTTATCT+GGG - Chr3:95041484-95041503 MsG0380017331.01.T01:intron 25.0%
! AATAAGTAATCCAATACTCA+CGG - Chr3:95040927-95040946 MsG0380017331.01.T01:intron 25.0%
! ATACAAGTTCTTAAGTGAAA+AGG + Chr3:95045055-95045074 None:intergenic 25.0%
! ATATCAGAATATGTCTTTCA+TGG + Chr3:95043857-95043876 None:intergenic 25.0%
! CAAAAAAATTGATATGGCAA+AGG - Chr3:95045757-95045776 MsG0380017331.01.T01:five_prime_UTR 25.0%
! CAATAATTGTACAATGATAC+AGG + Chr3:95045405-95045424 None:intergenic 25.0%
! CACTAGTAAAAAATTAGGAA+TGG + Chr3:95044117-95044136 None:intergenic 25.0%
! CATAAAAAAAAACACCGTAA+GGG + Chr3:95042830-95042849 None:intergenic 25.0%
! CTTAAGAACTTGTATACTAT+AGG - Chr3:95045060-95045079 MsG0380017331.01.T01:CDS 25.0%
! CTTATTTCAATAAGCTCTAT+AGG - Chr3:95042649-95042668 MsG0380017331.01.T01:intron 25.0%
! GAGAAATTATTTCCTGAATA+AGG + Chr3:95044643-95044662 None:intergenic 25.0%
! GCATGACTAAAAAAGTTATA+TGG + Chr3:95041301-95041320 None:intergenic 25.0%
! GCTTATTTGGATTTATCTTA+TGG - Chr3:95042562-95042581 MsG0380017331.01.T01:intron 25.0%
! GTCTACCAAAAAAATTGATA+TGG - Chr3:95045751-95045770 MsG0380017331.01.T01:five_prime_UTR 25.0%
! GTGATCACTAGTAAAAAATT+AGG + Chr3:95044122-95044141 None:intergenic 25.0%
! GTGTTCTTCATGTTTAATTA+AGG - Chr3:95043548-95043567 MsG0380017331.01.T01:intron 25.0%
! TAAAATTGCAAAGATAATGC+AGG - Chr3:95043895-95043914 MsG0380017331.01.T01:intron 25.0%
! TAAAGGTAGAAACATTTATC+TGG - Chr3:95041483-95041502 MsG0380017331.01.T01:intron 25.0%
! TAGTAAAAAATTAGGAATGG+TGG + Chr3:95044114-95044133 None:intergenic 25.0%
! TATTAAATAAGGATGCCAAT+TGG + Chr3:95042776-95042795 None:intergenic 25.0%
! TTAAAATTTGTCACTCCTAT+CGG - Chr3:95045606-95045625 MsG0380017331.01.T01:five_prime_UTR 25.0%
! TTACTTCAAAGATTGATTGA+TGG - Chr3:95045300-95045319 MsG0380017331.01.T01:intron 25.0%
! TTGTAAATGAAAGATAAGAG+AGG - Chr3:95041332-95041351 MsG0380017331.01.T01:intron 25.0%
! TTTCACATATGTTGAAAATG+TGG - Chr3:95041201-95041220 MsG0380017331.01.T01:intron 25.0%
!! ATATGGAACCTATAAAGTTT+TGG - Chr3:95041957-95041976 MsG0380017331.01.T01:intron 25.0%
!! TACTTTTCATATAAGCACTT+AGG + Chr3:95042720-95042739 None:intergenic 25.0%
!! TAGCTTATGATATCTTTTAG+CGG - Chr3:95042619-95042638 MsG0380017331.01.T01:intron 25.0%
!! TAGGTTCAAAATGTTTGTTA+TGG - Chr3:95040652-95040671 MsG0380017331.01.T01:CDS 25.0%
!! TATGAGATGTGATTCTAAAA+TGG - Chr3:95043454-95043473 MsG0380017331.01.T01:intron 25.0%
!! TATGGAACCTATAAAGTTTT+GGG - Chr3:95041958-95041977 MsG0380017331.01.T01:intron 25.0%
!! TGTAGAATGTTTGTTTGTTT+TGG + Chr3:95040150-95040169 None:intergenic 25.0%
!!! AGTTAGGTGTTTATTTTTGA+AGG - Chr3:95040353-95040372 MsG0380017331.01.T01:intron 25.0%
!!! ATTGAGTATTGCATTTTTTG+TGG - Chr3:95041831-95041850 MsG0380017331.01.T01:CDS 25.0%
!!! CTTTGCCATATCAATTTTTT+TGG + Chr3:95045759-95045778 None:intergenic 25.0%
!!! CTTTTTTTTTTTTGTGCGTT+TGG - Chr3:95042524-95042543 MsG0380017331.01.T01:intron 25.0%
!!! GCCTTTTTGTTATTTTGTTT+TGG - Chr3:95043756-95043775 MsG0380017331.01.T01:intron 25.0%
!!! GTCTCTTTTGACTATAAATA+GGG + Chr3:95042332-95042351 None:intergenic 25.0%
!!! GTTTGTTTGTTTTGGTATTA+AGG + Chr3:95040142-95040161 None:intergenic 25.0%
!!! TGATGGTGTATTTTAAGATT+TGG - Chr3:95041369-95041388 MsG0380017331.01.T01:intron 25.0%
!!! TGTCTCTTTTGACTATAAAT+AGG + Chr3:95042333-95042352 None:intergenic 25.0%
!!! TTTGTTATTGTCTTTGTTAC+AGG - Chr3:95045155-95045174 MsG0380017331.01.T01:intron 25.0%
!!! TTTTGTAATGTAAACTTGCT+CGG - Chr3:95045462-95045481 MsG0380017331.01.T01:CDS 25.0%
AAACAACCTATTGATCACAA+AGG + Chr3:95045002-95045021 None:intergenic 30.0%
AAAGAGAGCTTAAAATGTTG+TGG - Chr3:95045537-95045556 MsG0380017331.01.T01:CDS 30.0%
AACAAACCTCAACTCTTAAA+AGG - Chr3:95040112-95040131 MsG0380017331.01.T01:three_prime_UTR 30.0%
AACAAGGTTTATCTATCTCA+GGG - Chr3:95041594-95041613 MsG0380017331.01.T01:intron 30.0%
AACATCAGTTTCTAACAGTA+GGG - Chr3:95041774-95041793 MsG0380017331.01.T01:intron 30.0%
AACATTTATCTGGGTAAATG+AGG - Chr3:95041493-95041512 MsG0380017331.01.T01:intron 30.0%
AAGACATACTTGTGGATATT+AGG - Chr3:95041524-95041543 MsG0380017331.01.T01:intron 30.0%
AAGAGAGCTTAAAATGTTGT+GGG - Chr3:95045538-95045557 MsG0380017331.01.T01:CDS 30.0%
AAGTTCAGAAAAATTGAGAG+AGG + Chr3:95041730-95041749 None:intergenic 30.0%
AATTCCATCAAAAACAACAC+TGG + Chr3:95040444-95040463 None:intergenic 30.0%
AGGATATGACATGAACAAAT+TGG + Chr3:95043942-95043961 None:intergenic 30.0%
ATAAGAGCAAAAAGACCTAA+TGG + Chr3:95042046-95042065 None:intergenic 30.0%
ATACATGATATGCATGGATA+GGG - Chr3:95040585-95040604 MsG0380017331.01.T01:exon 30.0%
ATCAAACATTTACCAAAAGC+AGG + Chr3:95040892-95040911 None:intergenic 30.0%
ATGAACTCCCAAAACTTTAT+AGG + Chr3:95041968-95041987 None:intergenic 30.0%
ATGGATCTGTATATAAGCTT+GGG - Chr3:95041867-95041886 MsG0380017331.01.T01:CDS 30.0%
ATGTAATCAAAGAGTGAATG+TGG + Chr3:95042686-95042705 None:intergenic 30.0%
ATTCCATCAAAAACAACACT+GGG + Chr3:95040443-95040462 None:intergenic 30.0%
ATTGTATGCTTGTTCAGATT+GGG - Chr3:95044744-95044763 MsG0380017331.01.T01:CDS 30.0%
ATTTAATCTAGCTATTGGGA+TGG - Chr3:95040626-95040645 MsG0380017331.01.T01:CDS 30.0%
CACAAACAAAGAAGTTAGAT+GGG + Chr3:95043724-95043743 None:intergenic 30.0%
CAGTCAATTTATATATCCTG+AGG - Chr3:95044946-95044965 MsG0380017331.01.T01:intron 30.0%
CTACAAAATTACTGATACTG+TGG - Chr3:95043396-95043415 MsG0380017331.01.T01:intron 30.0%
CTACGTTTATGAAAAAAAGG+AGG - Chr3:95045202-95045221 MsG0380017331.01.T01:CDS 30.0%
CTTCTATTATACTCATCGAT+CGG - Chr3:95044389-95044408 MsG0380017331.01.T01:intron 30.0%
GAGCCTATTTATAGCTTATT+TGG - Chr3:95042549-95042568 MsG0380017331.01.T01:intron 30.0%
GATACATCAGCAAAAAACAA+TGG + Chr3:95045725-95045744 None:intergenic 30.0%
GCATAAAAAAAAACACCGTA+AGG + Chr3:95042831-95042850 None:intergenic 30.0%
GGAATTCATGGAATTCATAA+TGG - Chr3:95040458-95040477 MsG0380017331.01.T01:three_prime_UTR 30.0%
GGATATGACATGAACAAATT+GGG + Chr3:95043941-95043960 None:intergenic 30.0%
GGCATATTTCATTACGAATA+TGG - Chr3:95041940-95041959 MsG0380017331.01.T01:intron 30.0%
GTACATAACTCAGATAACAA+AGG + Chr3:95043001-95043020 None:intergenic 30.0%
TAAAAAATTAGGAATGGTGG+TGG + Chr3:95044111-95044130 None:intergenic 30.0%
TAAAATTTGTCACTCCTATC+GGG - Chr3:95045607-95045626 MsG0380017331.01.T01:five_prime_UTR 30.0%
TACAGTGTTAATTGACAATC+TGG + Chr3:95044504-95044523 None:intergenic 30.0%
TACTTTAATTCACGAGAGAT+TGG + Chr3:95042120-95042139 None:intergenic 30.0%
TATACATGATATGCATGGAT+AGG - Chr3:95040584-95040603 MsG0380017331.01.T01:exon 30.0%
TATTTGCGCCTTCAATATTA+TGG + Chr3:95042414-95042433 None:intergenic 30.0%
TCAACTTAAGTCTAAAGAGA+AGG - Chr3:95043641-95043660 MsG0380017331.01.T01:intron 30.0%
TCACAAACAAAGAAGTTAGA+TGG + Chr3:95043725-95043744 None:intergenic 30.0%
TCTAAACGCCATTTAAAAGT+AGG - Chr3:95043807-95043826 MsG0380017331.01.T01:intron 30.0%
TGAAAAAAATCCTGAGAAGT+TGG - Chr3:95043360-95043379 MsG0380017331.01.T01:intron 30.0%
TGAAAGTTAAAACGAAGTGT+TGG + Chr3:95040524-95040543 None:intergenic 30.0%
TGTCTTAACTCCAATATTCA+TGG - Chr3:95043260-95043279 MsG0380017331.01.T01:intron 30.0%
TGTTAATCCTACTTCTTGTA+CGG - Chr3:95043524-95043543 MsG0380017331.01.T01:CDS 30.0%
TGTTTCTTTCGATCTAAGTT+AGG - Chr3:95040337-95040356 MsG0380017331.01.T01:intron 30.0%
! ACTTCTTTGTTTGTGATATC+TGG - Chr3:95043729-95043748 MsG0380017331.01.T01:intron 30.0%
! ATAAACCTTGTTGTAGACAA+AGG + Chr3:95041586-95041605 None:intergenic 30.0%
! ATGTGATTGGTGATAATCTT+TGG - Chr3:95045667-95045686 MsG0380017331.01.T01:five_prime_UTR 30.0%
! ATTTTTCTGAACTTTCTCTC+TGG - Chr3:95041736-95041755 MsG0380017331.01.T01:intron 30.0%
! CACAGTATCAGTAATTTTGT+AGG + Chr3:95043398-95043417 None:intergenic 30.0%
! CTTTTGTACTGTTAACCATT+AGG - Chr3:95042028-95042047 MsG0380017331.01.T01:intron 30.0%
! GATTGGTTATTAAGGCTAAT+GGG - Chr3:95040742-95040761 MsG0380017331.01.T01:intron 30.0%
! TAAAATTAAGTGCCGTGATA+TGG - Chr3:95041045-95041064 MsG0380017331.01.T01:intron 30.0%
! TAAATCCAATTTTGTTCCTG+TGG + Chr3:95040994-95041013 None:intergenic 30.0%
! TAATTGGGTGATGTTTTTCA+AGG - Chr3:95044895-95044914 MsG0380017331.01.T01:intron 30.0%
! TTCATGTCTCTAATTTTGGA+AGG - Chr3:95041983-95042002 MsG0380017331.01.T01:intron 30.0%
! TTTTGAGCAATCAAAAGATC+TGG + Chr3:95043165-95043184 None:intergenic 30.0%
!! ATAAGTTGGATTTTGGCATT+AGG - Chr3:95042433-95042452 MsG0380017331.01.T01:CDS 30.0%
!! ATGTGAGTCTTATTCTTGAA+GGG + Chr3:95043136-95043155 None:intergenic 30.0%
!! CGCAAATATAAGTTGGATTT+TGG - Chr3:95042426-95042445 MsG0380017331.01.T01:CDS 30.0%
!! CTTTGAAGTAACAAACTTCT+TGG + Chr3:95045291-95045310 None:intergenic 30.0%
!! TGAATGTGCCTACTTTTAAA+TGG + Chr3:95043818-95043837 None:intergenic 30.0%
!! TTGACTTGGATTGAAACTTT+AGG - Chr3:95040549-95040568 MsG0380017331.01.T01:intron 30.0%
!! TTTTGACTATAAATAGGGCA+GGG + Chr3:95042327-95042346 None:intergenic 30.0%
!! TTTTGATTGCTCAAAAGCAA+AGG - Chr3:95043169-95043188 MsG0380017331.01.T01:intron 30.0%
!!! AGGATTTTTTTCAAAGCACA+TGG + Chr3:95043353-95043372 None:intergenic 30.0%
!!! ATTTTGACTTGAAACACTTC+AGG - Chr3:95042147-95042166 MsG0380017331.01.T01:intron 30.0%
!!! CTAGATTTTTTTAGATGAGC+AGG - Chr3:95045345-95045364 MsG0380017331.01.T01:intron 30.0%
!!! GTTGTTTTTGATGGAATTCA+TGG - Chr3:95040446-95040465 MsG0380017331.01.T01:three_prime_UTR 30.0%
!!! TTGATGGTTTTTTCTTCTTC+TGG - Chr3:95045316-95045335 MsG0380017331.01.T01:intron 30.0%
!!! TTGTAGACAAAGGTTTTGTT+AGG + Chr3:95041576-95041595 None:intergenic 30.0%
AAAAAGGAGGAAGACATTGA+CGG - Chr3:95045215-95045234 MsG0380017331.01.T01:CDS 35.0%
AAACCGATTAAATTCCCGAT+AGG + Chr3:95045624-95045643 None:intergenic 35.0%
AAGTAGTCACACATGCATAT+TGG + Chr3:95041087-95041106 None:intergenic 35.0%
AAGTCTGAAAGACATACTTG+TGG - Chr3:95041516-95041535 MsG0380017331.01.T01:intron 35.0%
AATCACATCCCATATAAGCA+AGG + Chr3:95045655-95045674 None:intergenic 35.0%
AATCATTGTTCTTTCTTCCC+TGG - Chr3:95041411-95041430 MsG0380017331.01.T01:intron 35.0%
ACCAGATTGTCAATTAACAC+TGG - Chr3:95044472-95044491 MsG0380017331.01.T01:CDS 35.0%
ACTCCTATCGGGAATTTAAT+CGG - Chr3:95045618-95045637 MsG0380017331.01.T01:five_prime_UTR 35.0%
ATAATCAAATGCAGTCTGGA+AGG + Chr3:95039881-95039900 None:intergenic 35.0%
ATCACATCCCATATAAGCAA+GGG + Chr3:95045654-95045673 None:intergenic 35.0%
ATCAGCAAAAAACAATGGAC+TGG + Chr3:95045720-95045739 None:intergenic 35.0%
ATCATTATGCTGGAAACAGT+AGG + Chr3:95040691-95040710 None:intergenic 35.0%
ATGAGATATGTGGAGTAGAA+AGG + Chr3:95043962-95043981 None:intergenic 35.0%
ATTGGCATGATAACAAAGAC+AGG + Chr3:95043047-95043066 None:intergenic 35.0%
ATTTATATATCCTGAGGTCG+TGG - Chr3:95044952-95044971 MsG0380017331.01.T01:intron 35.0%
CAAAACCTGTAACATGACAT+GGG - Chr3:95045800-95045819 MsG0380017331.01.T01:five_prime_UTR 35.0%
CAAAACCTTTGTCTACAACA+AGG - Chr3:95041578-95041597 MsG0380017331.01.T01:intron 35.0%
CAACAAGGTTTATCTATCTC+AGG - Chr3:95041593-95041612 MsG0380017331.01.T01:intron 35.0%
CACATTCACATAATTGTAGC+AGG - Chr3:95043830-95043849 MsG0380017331.01.T01:intron 35.0%
CATCATTGTAGTTCTTGAGA+TGG + Chr3:95044665-95044684 None:intergenic 35.0%
CATCTTCATTTAATCCACGT+TGG - Chr3:95045374-95045393 MsG0380017331.01.T01:CDS 35.0%
CATTGCACTTTCTAATGTGA+AGG - Chr3:95044701-95044720 MsG0380017331.01.T01:CDS 35.0%
CATTGTATGCTTGTTCAGAT+TGG - Chr3:95044743-95044762 MsG0380017331.01.T01:CDS 35.0%
CGAATCATATCCACATTTGA+GGG - Chr3:95043611-95043630 MsG0380017331.01.T01:intron 35.0%
CTGAGTAATGATCATTATGC+TGG + Chr3:95040701-95040720 None:intergenic 35.0%
CTGCATATACATGATATGCA+TGG - Chr3:95040579-95040598 MsG0380017331.01.T01:exon 35.0%
CTTTGTAAGAGCAGTAATGA+AGG + Chr3:95044369-95044388 None:intergenic 35.0%
GAACATCAGTTTCTAACAGT+AGG - Chr3:95041773-95041792 MsG0380017331.01.T01:intron 35.0%
GATAAGTGAAACCATGATGT+GGG + Chr3:95044789-95044808 None:intergenic 35.0%
GATGGATCTGTATATAAGCT+TGG - Chr3:95041866-95041885 MsG0380017331.01.T01:CDS 35.0%
GTAGAAAGCTGTAAATGCTA+AGG + Chr3:95045186-95045205 None:intergenic 35.0%
GTGAAACAGATTAGAGCAAT+TGG + Chr3:95039629-95039648 None:intergenic 35.0%
GTGATATGGAAAAACTGGTT+GGG - Chr3:95041059-95041078 MsG0380017331.01.T01:CDS 35.0%
GTTAATCCTACTTCTTGTAC+GGG - Chr3:95043525-95043544 MsG0380017331.01.T01:CDS 35.0%
GTTTACCACAGGAACAAAAT+TGG - Chr3:95040986-95041005 MsG0380017331.01.T01:intron 35.0%
TAAAGTTCAAATTTCGGAGC+TGG - Chr3:95044070-95044089 MsG0380017331.01.T01:intron 35.0%
TACAATGATGATCCAGCTAT+TGG - Chr3:95044675-95044694 MsG0380017331.01.T01:CDS 35.0%
TACATGATATGCATGGATAG+GGG - Chr3:95040586-95040605 MsG0380017331.01.T01:exon 35.0%
TAGGAATAGAAAAGTCCAGT+GGG - Chr3:95041543-95041562 MsG0380017331.01.T01:intron 35.0%
TATAGTCAAAAGAGACATGC+TGG - Chr3:95042336-95042355 MsG0380017331.01.T01:CDS 35.0%
TATCATGCCAATTGCACATT+TGG - Chr3:95043055-95043074 MsG0380017331.01.T01:intron 35.0%
TCAAAACCTGTAACATGACA+TGG - Chr3:95045799-95045818 MsG0380017331.01.T01:five_prime_UTR 35.0%
TCCAAAGCTTCTGTATATCT+TGG - Chr3:95043668-95043687 MsG0380017331.01.T01:intron 35.0%
TCCAAGATATACAGAAGCTT+TGG + Chr3:95043672-95043691 None:intergenic 35.0%
TCCAGTGTTAATTGACAATC+TGG + Chr3:95044476-95044495 None:intergenic 35.0%
TCGAATCATATCCACATTTG+AGG - Chr3:95043610-95043629 MsG0380017331.01.T01:intron 35.0%
TCGTATCAAGATGAGATATG+TGG + Chr3:95043972-95043991 None:intergenic 35.0%
TGATAAGTGAAACCATGATG+TGG + Chr3:95044790-95044809 None:intergenic 35.0%
TGATATGGAAAAACTGGTTG+GGG - Chr3:95041060-95041079 MsG0380017331.01.T01:CDS 35.0%
TGCTATGAAGACTAACAATG+TGG + Chr3:95044315-95044334 None:intergenic 35.0%
TGTTGTGTAGTTCCTTATTC+AGG - Chr3:95044628-95044647 MsG0380017331.01.T01:CDS 35.0%
TTAATCCTACTTCTTGTACG+GGG - Chr3:95043526-95043545 MsG0380017331.01.T01:CDS 35.0%
TTAATCTCTGCAGCATTTGA+AGG - Chr3:95040195-95040214 MsG0380017331.01.T01:three_prime_UTR 35.0%
TTAGAATTAGCCAACTTCTC+AGG + Chr3:95043373-95043392 None:intergenic 35.0%
TTAGGAATAGAAAAGTCCAG+TGG - Chr3:95041542-95041561 MsG0380017331.01.T01:intron 35.0%
TTAGGTACGAAACTTGATCA+TGG + Chr3:95042803-95042822 None:intergenic 35.0%
TTCACTCTTGATGCAAAACA+AGG - Chr3:95042092-95042111 MsG0380017331.01.T01:intron 35.0%
TTCCAGACTGCATTTGATTA+TGG - Chr3:95039880-95039899 MsG0380017331.01.T01:three_prime_UTR 35.0%
TTCTCTTACCAGTTCATTGT+TGG - Chr3:95041157-95041176 MsG0380017331.01.T01:CDS 35.0%
TTGAGCAAACATGACTCAAA+GGG + Chr3:95045696-95045715 None:intergenic 35.0%
TTGCTTATATGGGATGTGAT+TGG - Chr3:95045654-95045673 MsG0380017331.01.T01:five_prime_UTR 35.0%
TTGGCATGATAACAAAGACA+GGG + Chr3:95043046-95043065 None:intergenic 35.0%
TTGTATGCTTGTTCAGATTG+GGG - Chr3:95044745-95044764 MsG0380017331.01.T01:CDS 35.0%
TTGTGGAGAAAAACGAAAGA+TGG - Chr3:95041848-95041867 MsG0380017331.01.T01:CDS 35.0%
TTTGACTATAAATAGGGCAG+GGG + Chr3:95042326-95042345 None:intergenic 35.0%
TTTGAGCAAACATGACTCAA+AGG + Chr3:95045697-95045716 None:intergenic 35.0%
! AAGATATACAGAAGCTTTGG+AGG + Chr3:95043669-95043688 None:intergenic 35.0%
! ACTGTAATTTTTCTTGCAGG+AGG - Chr3:95043572-95043591 MsG0380017331.01.T01:intron 35.0%
! ATGTTGTTCTTACCTGCTTT+TGG - Chr3:95040877-95040896 MsG0380017331.01.T01:intron 35.0%
! ATTTGGTGGAGTGGATATAT+AGG - Chr3:95043072-95043091 MsG0380017331.01.T01:intron 35.0%
! CAACCAGTTTTTCCATATCA+CGG + Chr3:95041060-95041079 None:intergenic 35.0%
! CTGTAATTTTTCTTGCAGGA+GGG - Chr3:95043573-95043592 MsG0380017331.01.T01:intron 35.0%
! GGAGTTCATGTCTCTAATTT+TGG - Chr3:95041979-95041998 MsG0380017331.01.T01:intron 35.0%
! TCGATCGGTTTATTCATTCA+TGG - Chr3:95044404-95044423 MsG0380017331.01.T01:intron 35.0%
! TGATTGGTGATAATCTTTGG+CGG - Chr3:95045670-95045689 MsG0380017331.01.T01:five_prime_UTR 35.0%
! TTGAAGGCGCAAATATAAGT+TGG - Chr3:95042419-95042438 MsG0380017331.01.T01:CDS 35.0%
! TTGAATCTGAAGTTTACCAC+AGG - Chr3:95040975-95040994 MsG0380017331.01.T01:intron 35.0%
!! AAACGAAGTGTTGGTAAAGT+AGG + Chr3:95040515-95040534 None:intergenic 35.0%
!! AGATATACAGAAGCTTTGGA+GGG + Chr3:95043668-95043687 None:intergenic 35.0%
!! AGGCATAAGAGAAGTTTTGA+TGG - Chr3:95041352-95041371 MsG0380017331.01.T01:intron 35.0%
!! AGTTGAGGTTGTTTTCCATA+TGG - Chr3:95040218-95040237 MsG0380017331.01.T01:three_prime_UTR 35.0%
!! CTTTTGACTATAAATAGGGC+AGG + Chr3:95042328-95042347 None:intergenic 35.0%
!! GATGTGAGTCTTATTCTTGA+AGG + Chr3:95043137-95043156 None:intergenic 35.0%
!! GGATTGGTTATTAAGGCTAA+TGG - Chr3:95040741-95040760 MsG0380017331.01.T01:intron 35.0%
!! GTCGTTAACTTGTCTAATGA+TGG - Chr3:95044528-95044547 MsG0380017331.01.T01:intron 35.0%
!! TCTCTAATTTTGGAAGGTCT+TGG - Chr3:95041989-95042008 MsG0380017331.01.T01:intron 35.0%
!! TGGATTTTGGCATTAGGATT+AGG - Chr3:95042439-95042458 MsG0380017331.01.T01:CDS 35.0%
!! TGTGAGTCTTATTCTTGAAG+GGG + Chr3:95043135-95043154 None:intergenic 35.0%
!! TTTTTCAAAGCACATGGTTC+AGG + Chr3:95043347-95043366 None:intergenic 35.0%
!!! GGGTTAAGAATTTTTTGTCC+TGG - Chr3:95042487-95042506 MsG0380017331.01.T01:intron 35.0%
!!! GTAGAGGTATTTTTTTGCAG+TGG - Chr3:95045486-95045505 MsG0380017331.01.T01:CDS 35.0%
!!! TGGTTTTTTCTTCTTCTGGT+TGG - Chr3:95045320-95045339 MsG0380017331.01.T01:intron 35.0%
AAGACAGGGATCTTTATGCT+TGG + Chr3:95043032-95043051 None:intergenic 40.0%
ACCTGGGAAGCTATTTAGAT+TGG - Chr3:95045579-95045598 MsG0380017331.01.T01:exon 40.0%
AGAAGACCTAATTGCTCAGA+GGG + Chr3:95040040-95040059 None:intergenic 40.0%
AGTCTCTGTCAAATCATCTC+TGG - Chr3:95042466-95042485 MsG0380017331.01.T01:intron 40.0%
AGTTATGGATCACAGAGTCA+CGG + Chr3:95039856-95039875 None:intergenic 40.0%
ATAGACAACCAGTATTCTCG+TGG + Chr3:95042854-95042873 None:intergenic 40.0%
ATCTGAGTTATGTACCTTGC+AGG - Chr3:95043006-95043025 MsG0380017331.01.T01:intron 40.0%
ATTAAGGCTAATGGGACTAG+TGG - Chr3:95040750-95040769 MsG0380017331.01.T01:intron 40.0%
CACAGCAAAATTCCAAGATG+AGG + Chr3:95044847-95044866 None:intergenic 40.0%
CAGACTGCATTTGATTATGG+CGG - Chr3:95039883-95039902 MsG0380017331.01.T01:three_prime_UTR 40.0%
CAGTTCAGAGCCATGAATAT+TGG + Chr3:95043273-95043292 None:intergenic 40.0%
CATCATTCCGTCAATGTTGA+AGG - Chr3:95040276-95040295 MsG0380017331.01.T01:three_prime_UTR 40.0%
CCAATTATTCCCTTCTGCAA+GGG + Chr3:95044882-95044901 None:intergenic 40.0%
CCTGGGAAGCTATTTAGATT+GGG - Chr3:95045580-95045599 MsG0380017331.01.T01:exon 40.0%
CCTTGCAGAAGGGAATAATT+GGG - Chr3:95044880-95044899 MsG0380017331.01.T01:intron 40.0%
CGTGATATGGAAAAACTGGT+TGG - Chr3:95041058-95041077 MsG0380017331.01.T01:CDS 40.0%
CTAGCTATTGGGATGGAAAT+AGG - Chr3:95040633-95040652 MsG0380017331.01.T01:CDS 40.0%
CTATTGATCACAAAGGAGAG+AGG + Chr3:95044995-95045014 None:intergenic 40.0%
CTCTCTCCTTTGTGATCAAT+AGG - Chr3:95044993-95045012 MsG0380017331.01.T01:CDS 40.0%
GAGCTTAAAATGTTGTGGGT+TGG - Chr3:95045542-95045561 MsG0380017331.01.T01:CDS 40.0%
GATGAAATTGCCGTGAGTAT+TGG + Chr3:95040940-95040959 None:intergenic 40.0%
GCATTAAATCCCTTGCAGAA+GGG - Chr3:95044870-95044889 MsG0380017331.01.T01:intron 40.0%
GCTTCTGTATATCTTGGAAG+TGG - Chr3:95043674-95043693 MsG0380017331.01.T01:intron 40.0%
GGATGATGTTTCTTGCTCAA+AGG - Chr3:95043475-95043494 MsG0380017331.01.T01:CDS 40.0%
GGTAAGAACAACATCTACCT+TGG + Chr3:95040871-95040890 None:intergenic 40.0%
GTATATCTTGGAAGTGGAAG+AGG - Chr3:95043680-95043699 MsG0380017331.01.T01:intron 40.0%
GTCTCTGTCAAATCATCTCT+GGG - Chr3:95042467-95042486 MsG0380017331.01.T01:intron 40.0%
TAGACAACCAGTATTCTCGT+GGG + Chr3:95042853-95042872 None:intergenic 40.0%
TATGACCCATGTCATGTTAC+AGG + Chr3:95045808-95045827 None:intergenic 40.0%
TCAATCACCCTCAGTTTGAA+CGG - Chr3:95041651-95041670 MsG0380017331.01.T01:intron 40.0%
TCTGAGCAATTAGGTCTTCT+CGG - Chr3:95040040-95040059 MsG0380017331.01.T01:three_prime_UTR 40.0%
TGCATTAAATCCCTTGCAGA+AGG - Chr3:95044869-95044888 MsG0380017331.01.T01:intron 40.0%
TGCTTCACCTTCAACATTGA+CGG + Chr3:95040286-95040305 None:intergenic 40.0%
TGGAAGGTCTTGGATATCAA+AGG - Chr3:95041999-95042018 MsG0380017331.01.T01:intron 40.0%
TTGAATCCATTGACAGTGCT+TGG - Chr3:95045116-95045135 MsG0380017331.01.T01:intron 40.0%
TTGAGAAAATGCCCACATCA+TGG - Chr3:95044775-95044794 MsG0380017331.01.T01:intron 40.0%
TTTGCAGCATCAACCAATGA+AGG + Chr3:95040837-95040856 None:intergenic 40.0%
! AAGAATTTGGAGCAGCCATA+TGG + Chr3:95040236-95040255 None:intergenic 40.0%
! AGAACCTGTAGAGGTATGAT+GGG + Chr3:95043212-95043231 None:intergenic 40.0%
! CAGTGTGCTTACATTTTTGC+AGG + Chr3:95044437-95044456 None:intergenic 40.0%
! GGAGGTTGATTGATAAACCT+GGG - Chr3:95045563-95045582 MsG0380017331.01.T01:CDS 40.0%
! GGGACTGTAATTTTTCTTGC+AGG - Chr3:95043569-95043588 MsG0380017331.01.T01:intron 40.0%
! TAAACTGTTGGTGCCTTCAT+TGG - Chr3:95040821-95040840 MsG0380017331.01.T01:intron 40.0%
! TACCAGTTCATTGTTGGTGA+TGG - Chr3:95041163-95041182 MsG0380017331.01.T01:CDS 40.0%
! TGGAGGTTGATTGATAAACC+TGG - Chr3:95045562-95045581 MsG0380017331.01.T01:CDS 40.0%
! TGGTGTGCACACTTTTAACA+AGG - Chr3:95041431-95041450 MsG0380017331.01.T01:intron 40.0%
! TGTTAAAAGTGTGCACACCA+GGG + Chr3:95041431-95041450 None:intergenic 40.0%
! TTCATTGGTTGATGCTGCAA+AGG - Chr3:95040836-95040855 MsG0380017331.01.T01:intron 40.0%
! TTGTTAAAAGTGTGCACACC+AGG + Chr3:95041432-95041451 None:intergenic 40.0%
! TTTTATGCCCACGAGAATAC+TGG - Chr3:95042843-95042862 MsG0380017331.01.T01:intron 40.0%
! TTTTGATGCATCCGACTCAA+AGG + Chr3:95045785-95045804 None:intergenic 40.0%
!! CTTAAAATGTTGTGGGTTGG+AGG - Chr3:95045545-95045564 MsG0380017331.01.T01:CDS 40.0%
!! GGTTGACCTTTTAAGAGTTG+AGG + Chr3:95040121-95040140 None:intergenic 40.0%
!! TCCTGCAGCTTTTTCTGAAA+CGG + Chr3:95041272-95041291 None:intergenic 40.0%
!! TTCAATGGTGGATCCCAAAT+CGG + Chr3:95040011-95040030 None:intergenic 40.0%
!!! TCTCCCAGTGTTGTTTTTGA+TGG - Chr3:95040437-95040456 MsG0380017331.01.T01:three_prime_UTR 40.0%
!!! TTTTGTTGACTCTGAAGCAG+TGG - Chr3:95045513-95045532 MsG0380017331.01.T01:CDS 40.0%
AAACGTCACAGAACCTGTAG+AGG + Chr3:95043221-95043240 None:intergenic 45.0%
AAAGTAGAGAAGGTAGGACG+TGG + Chr3:95039826-95039845 None:intergenic 45.0%
AAGTTTGAATCCACGACCTC+AGG + Chr3:95044965-95044984 None:intergenic 45.0%
AATAACCAATCCCTCACCCT+CGG + Chr3:95040733-95040752 None:intergenic 45.0%
AATCACCCTCAGTTTGAACG+GGG - Chr3:95041653-95041672 MsG0380017331.01.T01:intron 45.0%
ACCGTTTCAGAAAAAGCTGC+AGG - Chr3:95041268-95041287 MsG0380017331.01.T01:intron 45.0%
ACTGCATTTGATTATGGCGG+CGG - Chr3:95039886-95039905 MsG0380017331.01.T01:three_prime_UTR 45.0%
AGAGATATCGCAGCCGTAAA+TGG + Chr3:95039723-95039742 None:intergenic 45.0%
AGCTCGATCAGCACATATGT+GGG + Chr3:95041233-95041252 None:intergenic 45.0%
AGTGCAATGTGTCCAATAGC+TGG + Chr3:95044690-95044709 None:intergenic 45.0%
ATACAACTCCCAGCATTAGC+AGG + Chr3:95044198-95044217 None:intergenic 45.0%
ATCGTTGCCTTATCCACCTT+CGG - Chr3:95040487-95040506 MsG0380017331.01.T01:intron 45.0%
ATCTTTATGCTTGGCCTGCA+AGG + Chr3:95043023-95043042 None:intergenic 45.0%
CAATCACCCTCAGTTTGAAC+GGG - Chr3:95041652-95041671 MsG0380017331.01.T01:intron 45.0%
CACTCCACCAAATGTGCAAT+TGG + Chr3:95043065-95043084 None:intergenic 45.0%
CAGGTCCAAAAATGCTGCTA+GGG + Chr3:95040797-95040816 None:intergenic 45.0%
CAGTGTAACCTGCTAATGCT+GGG - Chr3:95044187-95044206 MsG0380017331.01.T01:intron 45.0%
CATGCCAATTGCACATTTGG+TGG - Chr3:95043058-95043077 MsG0380017331.01.T01:intron 45.0%
CATTGACGGAATGATGAAGC+TGG + Chr3:95040272-95040291 None:intergenic 45.0%
CCCAATCTAAATAGCTTCCC+AGG + Chr3:95045583-95045602 None:intergenic 45.0%
CCCAATTATTCCCTTCTGCA+AGG + Chr3:95044883-95044902 None:intergenic 45.0%
CCCTTGCAGAAGGGAATAAT+TGG - Chr3:95044879-95044898 MsG0380017331.01.T01:intron 45.0%
CGCCATAATCAAATGCAGTC+TGG + Chr3:95039885-95039904 None:intergenic 45.0%
CGTCCTACCTTCTCTACTTT+CGG - Chr3:95039826-95039845 MsG0380017331.01.T01:three_prime_UTR 45.0%
CTATCTCAGGGACAAACTCA+GGG - Chr3:95041606-95041625 MsG0380017331.01.T01:intron 45.0%
CTTGAACCCTCTGAGCAATT+AGG - Chr3:95040031-95040050 MsG0380017331.01.T01:three_prime_UTR 45.0%
CTTTCTCAGTTGCCTCATCT+TGG - Chr3:95044832-95044851 MsG0380017331.01.T01:intron 45.0%
GACGGTTCCATCACCATTTA+CGG - Chr3:95039707-95039726 MsG0380017331.01.T01:three_prime_UTR 45.0%
GAGAAGACCTAATTGCTCAG+AGG + Chr3:95040041-95040060 None:intergenic 45.0%
GAGTGGATATATAGGCTGCT+TGG - Chr3:95043080-95043099 MsG0380017331.01.T01:intron 45.0%
GCAGGAAGTTGCAGTAGTTT+AGG - Chr3:95043913-95043932 MsG0380017331.01.T01:intron 45.0%
GCGATATCTCTCCTCACAAA+AGG - Chr3:95039732-95039751 MsG0380017331.01.T01:three_prime_UTR 45.0%
GGACACACACGAAAGAGTAA+GGG + Chr3:95039685-95039704 None:intergenic 45.0%
GGACACAGTAGGTGTTCAAT+CGG + Chr3:95039982-95040001 None:intergenic 45.0%
GTCCTACCTTCTCTACTTTC+GGG - Chr3:95039827-95039846 MsG0380017331.01.T01:three_prime_UTR 45.0%
GTGCCGTGATATGGAAAAAC+TGG - Chr3:95041054-95041073 MsG0380017331.01.T01:CDS 45.0%
TACTCAGCAACTAAAGCCGA+GGG - Chr3:95040714-95040733 MsG0380017331.01.T01:CDS 45.0%
TCAGTGTAACCTGCTAATGC+TGG - Chr3:95044186-95044205 MsG0380017331.01.T01:intron 45.0%
TCGCTTTCTCTCATGTTGTG+TGG - Chr3:95045088-95045107 MsG0380017331.01.T01:CDS 45.0%
TCGTACCTAATGCACCCTTA+CGG - Chr3:95042813-95042832 MsG0380017331.01.T01:intron 45.0%
TCTATCTCAGGGACAAACTC+AGG - Chr3:95041605-95041624 MsG0380017331.01.T01:intron 45.0%
TCTTAAGTGAAAAGGCTCCC+AGG + Chr3:95045047-95045066 None:intergenic 45.0%
TGATACAGGGAATTCCAACG+TGG + Chr3:95045391-95045410 None:intergenic 45.0%
TGCAGCATTTGAAGGAGTTG+AGG - Chr3:95040203-95040222 MsG0380017331.01.T01:three_prime_UTR 45.0%
TGCCATCACCAACAATGAAC+TGG + Chr3:95041168-95041187 None:intergenic 45.0%
TGGACCTGGTGATAAACTGT+TGG - Chr3:95040809-95040828 MsG0380017331.01.T01:intron 45.0%
TTACTCAGCAACTAAAGCCG+AGG - Chr3:95040713-95040732 MsG0380017331.01.T01:CDS 45.0%
TTCAGAAAAAGCTGCAGGAG+AGG - Chr3:95041273-95041292 MsG0380017331.01.T01:intron 45.0%
! AAACACCGTAAGGGTGCATT+AGG + Chr3:95042821-95042840 None:intergenic 45.0%
! AGAGGGTTCAAGTTCAATGG+TGG + Chr3:95040023-95040042 None:intergenic 45.0%
! ATACGCCCTAGCAGCATTTT+TGG - Chr3:95040789-95040808 MsG0380017331.01.T01:intron 45.0%
! CAATTGCACATTTGGTGGAG+TGG - Chr3:95043063-95043082 MsG0380017331.01.T01:intron 45.0%
! CAGAACCTGTAGAGGTATGA+TGG + Chr3:95043213-95043232 None:intergenic 45.0%
! CTCAGAGGGTTCAAGTTCAA+TGG + Chr3:95040026-95040045 None:intergenic 45.0%
! GAGGCACCTTCATTCCATAT+GGG + Chr3:95043106-95043125 None:intergenic 45.0%
! GCAGTCTGGAAGGTTAGTTA+TGG + Chr3:95039871-95039890 None:intergenic 45.0%
! TCCCATATAAGCAAGGGCAT+CGG + Chr3:95045648-95045667 None:intergenic 45.0%
! TCTCATCCAAGCACTGTCAA+TGG + Chr3:95045125-95045144 None:intergenic 45.0%
! TGAGGCACCTTCATTCCATA+TGG + Chr3:95043107-95043126 None:intergenic 45.0%
! TGATTTTCGGCCCTCAAATG+TGG + Chr3:95043624-95043643 None:intergenic 45.0%
! TGTAAACTTGCTCGGAGTAG+AGG - Chr3:95045470-95045489 MsG0380017331.01.T01:CDS 45.0%
!! AGGTTTGTTGCGAAGATCGA+CGG + Chr3:95040101-95040120 None:intergenic 45.0%
!! GGGTGAGGGATTGGTTATTA+AGG - Chr3:95040734-95040753 MsG0380017331.01.T01:intron 45.0%
!! GTATGATGGGTGCATAGTCA+AGG + Chr3:95043199-95043218 None:intergenic 45.0%
!! GTTGGTAAAGTAGGTACCGA+AGG + Chr3:95040506-95040525 None:intergenic 45.0%
!! TTTTCTTGCAGGAGGGCATA+CGG - Chr3:95043580-95043599 MsG0380017331.01.T01:intron 45.0%
AATAGCCCCCGTTCAAACTG+AGG + Chr3:95041662-95041681 None:intergenic 50.0%
ACGTGTCAGCAACTGCAATG+TGG + Chr3:95044262-95044281 None:intergenic 50.0%
ATAGCCCCCGTTCAAACTGA+GGG + Chr3:95041661-95041680 None:intergenic 50.0%
ATCACCCTCAGTTTGAACGG+GGG - Chr3:95041654-95041673 MsG0380017331.01.T01:intron 50.0%
ATCGCAGCCGTAAATGGTGA+TGG + Chr3:95039717-95039736 None:intergenic 50.0%
ATTCTTGAAGGGGTCAGCTG+AGG + Chr3:95043125-95043144 None:intergenic 50.0%
CACCCGAAAGTAGAGAAGGT+AGG + Chr3:95039832-95039851 None:intergenic 50.0%
CAGTTGCTGACACGTTGCTT+TGG - Chr3:95044267-95044286 MsG0380017331.01.T01:CDS 50.0%
CCAGGTCCAAAAATGCTGCT+AGG + Chr3:95040798-95040817 None:intergenic 50.0%
CGGACACACACGAAAGAGTA+AGG + Chr3:95039686-95039705 None:intergenic 50.0%
CTCGGTCAAGCTTTACACTC+CGG - Chr3:95040058-95040077 MsG0380017331.01.T01:three_prime_UTR 50.0%
CTGCTCGTTCTTAGCTTCCT+GGG - Chr3:95045027-95045046 MsG0380017331.01.T01:CDS 50.0%
GAACACCCCGTACAAGAAGT+AGG + Chr3:95043534-95043553 None:intergenic 50.0%
GAGCTCGATCAGCACATATG+TGG + Chr3:95041234-95041253 None:intergenic 50.0%
GCCGATGCCCTTGCTTATAT+GGG - Chr3:95045644-95045663 MsG0380017331.01.T01:five_prime_UTR 50.0%
GCTGGCATGTGACTATACTG+AGG - Chr3:95042354-95042373 MsG0380017331.01.T01:CDS 50.0%
GCTTGGCCCATATGGAATGA+AGG - Chr3:95043097-95043116 MsG0380017331.01.T01:intron 50.0%
GGAGACATATTGAGCACGAC+CGG + Chr3:95040080-95040099 None:intergenic 50.0%
GGCACCAACAGTTTATCACC+AGG + Chr3:95040816-95040835 None:intergenic 50.0%
TAGGGCGTATGCAACATGTC+AGG + Chr3:95040779-95040798 None:intergenic 50.0%
TATAGGCTGCTTGGCCCATA+TGG - Chr3:95043089-95043108 MsG0380017331.01.T01:intron 50.0%
TCTGCTCGTTCTTAGCTTCC+TGG - Chr3:95045026-95045045 MsG0380017331.01.T01:CDS 50.0%
TGCAAAGGCAGGGAAATCCA+AGG - Chr3:95040851-95040870 MsG0380017331.01.T01:intron 50.0%
TGCACCCATCATACCTCTAC+AGG - Chr3:95043205-95043224 MsG0380017331.01.T01:intron 50.0%
TGCCGATGCCCTTGCTTATA+TGG - Chr3:95045643-95045662 MsG0380017331.01.T01:five_prime_UTR 50.0%
TGGCAAAGGCTCCTTTGAGT+CGG - Chr3:95045771-95045790 MsG0380017331.01.T01:five_prime_UTR 50.0%
TTGTTAGGATGTCAGCCCAC+TGG + Chr3:95041561-95041580 None:intergenic 50.0%
! GATCGAGCTCTAGCTTCAGA+GGG - Chr3:95041244-95041263 MsG0380017331.01.T01:intron 50.0%
! GTGTCTGACAAGCTTGCTCT+TGG - Chr3:95041628-95041647 MsG0380017331.01.T01:intron 50.0%
! TGATCGAGCTCTAGCTTCAG+AGG - Chr3:95041243-95041262 MsG0380017331.01.T01:intron 50.0%
! TGATGGGTGCATAGTCAAGG+CGG + Chr3:95043196-95043215 None:intergenic 50.0%
! TGCTGACACGTTGCTTTGGA+AGG - Chr3:95044271-95044290 MsG0380017331.01.T01:CDS 50.0%
! TGGTTGATGCTGCAAAGGCA+GGG - Chr3:95040841-95040860 MsG0380017331.01.T01:intron 50.0%
! TTGGTTGATGCTGCAAAGGC+AGG - Chr3:95040840-95040859 MsG0380017331.01.T01:intron 50.0%
!! AAATGGTGATGGAACCGTCG+CGG + Chr3:95039706-95039725 None:intergenic 50.0%
!! CCTAGCAGCATTTTTGGACC+TGG - Chr3:95040795-95040814 MsG0380017331.01.T01:intron 50.0%
!! GGCTTGCAGTTGGTGAATCT+CGG + Chr3:95039790-95039809 None:intergenic 50.0%
!! GGTAAAGTAGGTACCGAAGG+TGG + Chr3:95040503-95040522 None:intergenic 50.0%
!! GTAGGTACCGAAGGTGGATA+AGG + Chr3:95040497-95040516 None:intergenic 50.0%
AAAGGCGACTGTCGTCGCAA+CGG - Chr3:95039750-95039769 MsG0380017331.01.T01:three_prime_UTR 55.0%
AGCAACTAAAGCCGAGGGTG+AGG - Chr3:95040719-95040738 MsG0380017331.01.T01:intron 55.0%
CGGACACCCGAAAGTAGAGA+AGG + Chr3:95039836-95039855 None:intergenic 55.0%
GAAAGGTGGTGTGTGGTCAC+CGG - Chr3:95039914-95039933 MsG0380017331.01.T01:three_prime_UTR 55.0%
GCAACTAAAGCCGAGGGTGA+GGG - Chr3:95040720-95040739 MsG0380017331.01.T01:intron 55.0%
GCATTTGATTATGGCGGCGG+CGG - Chr3:95039889-95039908 MsG0380017331.01.T01:three_prime_UTR 55.0%
TAAAGCCGAGGGTGAGGGAT+TGG - Chr3:95040725-95040744 MsG0380017331.01.T01:intron 55.0%
TCACCAACTGCAAGCCTCAG+CGG - Chr3:95039794-95039813 MsG0380017331.01.T01:three_prime_UTR 55.0%
TCTTTCGTGTGTGTCCGCGA+CGG - Chr3:95039689-95039708 MsG0380017331.01.T01:three_prime_UTR 55.0%
TGGATCCCAAATCGGCGATG+CGG + Chr3:95040003-95040022 None:intergenic 55.0%
! GACGACAGTCGCCTTTTGTG+AGG + Chr3:95039746-95039765 None:intergenic 55.0%
!! GCAGTTGGTGAATCTCGGTG+CGG + Chr3:95039785-95039804 None:intergenic 55.0%
!! TGTGTCCGCATCGCCGATTT+GGG - Chr3:95039995-95040014 MsG0380017331.01.T01:three_prime_UTR 55.0%
AGCAGCAAAGCCTCGTCCTC+CGG + Chr3:95039936-95039955 None:intergenic 60.0%
ATCGGCGATGCGGACACAGT+AGG + Chr3:95039993-95040012 None:intergenic 60.0%
TTTGATTATGGCGGCGGCGG+AGG - Chr3:95039892-95039911 MsG0380017331.01.T01:three_prime_UTR 60.0%
! CTGTGTCCGCATCGCCGATT+TGG - Chr3:95039994-95040013 MsG0380017331.01.T01:three_prime_UTR 60.0%
! TCTTGCAGGAGGGCATACGG+AGG - Chr3:95043583-95043602 MsG0380017331.01.T01:intron 60.0%
AGGTGGTGTGTGGTCACCGG+AGG - Chr3:95039917-95039936 MsG0380017331.01.T01:three_prime_UTR 65.0%
GGCGGAGGAAAGGTGGTGTG+TGG - Chr3:95039907-95039926 MsG0380017331.01.T01:three_prime_UTR 65.0%
TGTGTGGTCACCGGAGGACG+AGG - Chr3:95039923-95039942 MsG0380017331.01.T01:three_prime_UTR 65.0%
TTATGGCGGCGGCGGAGGAA+AGG - Chr3:95039897-95039916 MsG0380017331.01.T01:three_prime_UTR 65.0%
GCGCCGCTGAGGCTTGCAGT+TGG + Chr3:95039800-95039819 None:intergenic 70.0%
GGACGTGGATCGCGCCGCTG+AGG + Chr3:95039811-95039830 None:intergenic 75.0%
TGGCGGCGGCGGAGGAAAGG+TGG - Chr3:95039900-95039919 MsG0380017331.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 95039609 95045886 95039609 ID=MsG0380017331.01;Name=MsG0380017331.01
Chr3 mRNA 95039609 95045886 95039609 ID=MsG0380017331.01.T01;Parent=MsG0380017331.01;Name=MsG0380017331.01.T01;_AED=0.38;_eAED=0.40;_QI=290|0.75|0.76|1|0.83|0.76|13|788|515
Chr3 exon 95039609 95040318 95039609 ID=MsG0380017331.01.T01:exon:2139;Parent=MsG0380017331.01.T01
Chr3 exon 95040414 95040480 95040414 ID=MsG0380017331.01.T01:exon:2138;Parent=MsG0380017331.01.T01
Chr3 exon 95040579 95040734 95040579 ID=MsG0380017331.01.T01:exon:2137;Parent=MsG0380017331.01.T01
Chr3 exon 95041051 95041202 95041051 ID=MsG0380017331.01.T01:exon:2136;Parent=MsG0380017331.01.T01
Chr3 exon 95041794 95041904 95041794 ID=MsG0380017331.01.T01:exon:2135;Parent=MsG0380017331.01.T01
Chr3 exon 95042269 95042467 95042269 ID=MsG0380017331.01.T01:exon:2134;Parent=MsG0380017331.01.T01
Chr3 exon 95043475 95043554 95043475 ID=MsG0380017331.01.T01:exon:2133;Parent=MsG0380017331.01.T01
Chr3 exon 95044201 95044326 95044201 ID=MsG0380017331.01.T01:exon:2132;Parent=MsG0380017331.01.T01
Chr3 exon 95044420 95044498 95044420 ID=MsG0380017331.01.T01:exon:2131;Parent=MsG0380017331.01.T01
Chr3 exon 95044597 95044793 95044597 ID=MsG0380017331.01.T01:exon:2130;Parent=MsG0380017331.01.T01
Chr3 exon 95044987 95045120 95044987 ID=MsG0380017331.01.T01:exon:2129;Parent=MsG0380017331.01.T01
Chr3 exon 95045198 95045287 95045198 ID=MsG0380017331.01.T01:exon:2128;Parent=MsG0380017331.01.T01
Chr3 exon 95045362 95045886 95045362 ID=MsG0380017331.01.T01:exon:2127;Parent=MsG0380017331.01.T01
Chr3 five_prime_UTR 95045597 95045886 95045597 ID=MsG0380017331.01.T01:five_prime_utr;Parent=MsG0380017331.01.T01
Chr3 CDS 95045362 95045596 95045362 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95045198 95045287 95045198 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95044987 95045120 95044987 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95044597 95044793 95044597 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95044420 95044498 95044420 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95044201 95044326 95044201 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95043475 95043554 95043475 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95042269 95042467 95042269 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95041794 95041904 95041794 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95041051 95041202 95041051 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 CDS 95040590 95040734 95040590 ID=MsG0380017331.01.T01:cds;Parent=MsG0380017331.01.T01
Chr3 three_prime_UTR 95040579 95040589 95040579 ID=MsG0380017331.01.T01:three_prime_utr;Parent=MsG0380017331.01.T01
Chr3 three_prime_UTR 95040414 95040480 95040414 ID=MsG0380017331.01.T01:three_prime_utr;Parent=MsG0380017331.01.T01
Chr3 three_prime_UTR 95039609 95040318 95039609 ID=MsG0380017331.01.T01:three_prime_utr;Parent=MsG0380017331.01.T01
Gene Sequence

>MsG0380017331.01.T01

ATGGCGGCGGCGGAGGAAAGGTGGTGTGTGGTCACCGGAGGACGAGGCTTTGCTGCTCGTCATTTAGTCGAAATGCTAATCCGATTGAACACCTACTGTGTCCGCATCGCCGATTTGGGATCCACCATTGAACTTGAACCCTCTGAGCAATTAGGTCTTCTCGGTCAAGCTTTACACTCCGGTCGTGCTCAATATGTCTCCGTCGATCTTCGCAACAAACCTCAACTCTTAAAAGCATTTGAAGGAGTTGAGGTTGTTTTCCATATGGCTGCTCCAAATTCTTCTATAAACAACTACCAGCTTCATCATTCCGTCAATGTTGAAGGAACAAAGAATGTTATTGATGCTTGTGTTGAGTTAAAAGTGAAGAGACTCGTTTATACTAGTTCTCCCAGTGTTGTTTTTGATGGAATTCATGGAATTCATAATGGAAGTGAATCGTTGCCTTATCCACCTTCGCATAATGATCATTACTCAGCAACTAAAGCCGAGGGTGAGGGATTGGTTATTAAGGCTAATGGGACTAGTGGACTCCTGACATGTTGCATACGCCCTAGCAGCATTTTTGGACCTGGTGATAAACTGTTGGTGCCTTCATTGGTTGATGCTGCAAAGGCAGGGAAATCCAAGGTAGATGTTGTTCTTACCTGCTTTTGGAACAAAATTGGATTTAGATTGATCACAAAATTGTTAATTTTTCTTAATAAAATTAAGTGCCGTGATATGGAAAAACTGTTCATTGTTGGTGATGGCAATAACGTATACGATTTCACATATGTTGAAAATGTGGCTCATGCCCACATATGTGCTGATCGAGCTCTAGCTTCAGAGGGAACCGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATTACGAATATGGAACCTATAAAGTTTTGGGAGTTCATGTCTCTAATTTTGGAAGGTCTTGGATATCAAAGGCCAAGCATAAAGATCCCTGTCTTTGTTATCATGCCAATTGCACATTTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGAATGAAGGTGCCTCAGCTGACCCCTTCAAGAATAAGACTCACATCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGACCGCCTTGACTATGCACCCATCATACCTCTACAGGAGGGCATACGGAGGACAATCGAATCATATCCACATTTGAGGGCCGAAAATCAACTTAAGTCTAAAGAGAAGGTCCCTCCAAAGCTTCTGTATATCTTGGAAGTGGAAGAGGATAAAAAGCAAACTTTCACCACATTGTTAGTCTTCATAGCAATATATGTCAACTTCATTGCATCTGAGAATACCTTCATTACTGCTCTTACAAAGCTTCTATTATACTCATCGATCGGTTTATTCATTCATGGCATTCTTCCTGCAAAAATATTGGGGTACACTGTTGAGAAAATGCCCACATCATGGTTTCACTTATCAGAAGATATTTCAAATCAAATTGCTTTCTCAGTTGCCTCATCTTGGAATTTTGCTGTGAATGCATTAAATCCCTTGCAGAAGGGAATAATTGGGTGA

Protein sequence

>MsG0380017331.01.T01

MAAAEERWCVVTGGRGFAARHLVEMLIRLNTYCVRIADLGSTIELEPSEQLGLLGQALHSGRAQYVSVDLRNKPQLLKAFEGVEVVFHMAAPNSSINNYQLHHSVNVEGTKNVIDACVELKVKRLVYTSSPSVVFDGIHGIHNGSESLPYPPSHNDHYSATKAEGEGLVIKANGTSGLLTCCIRPSSIFGPGDKLLVPSLVDAAKAGKSKVDVVLTCFWNKIGFRLITKLLIFLNKIKCRDMEKLFIVGDGNNVYDFTYVENVAHAHICADRALASEGTVSEKAAGEAYFITNMEPIKFWEFMSLILEGLGYQRPSIKIPVFVIMPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTSCTRSFDCSKAKDRLDYAPIIPLQEGIRRTIESYPHLRAENQLKSKEKVPPKLLYILEVEEDKKQTFTTLLVFIAIYVNFIASENTFITALTKLLLYSSIGLFIHGILPAKILGYTVEKMPTSWFHLSEDISNQIAFSVASSWNFAVNALNPLQKGIIG*