AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023743.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023743.01.T02 MTR_8g101330 88.138 607 7 3 1 607 1 542 0.0 1072
MsG0480023743.01.T02 MTR_1g071610 44.376 489 237 2 74 561 44 498 1.17e-130 400
MsG0480023743.01.T02 MTR_3g073860 29.216 510 287 8 41 485 10 510 1.15e-57 211
MsG0480023743.01.T02 MTR_3g073820 29.424 486 274 7 65 485 7 488 2.45e-57 209
MsG0480023743.01.T01 MTR_8g101330 88.138 607 7 3 1 607 1 542 0.0 1072
MsG0480023743.01.T01 MTR_1g071610 44.376 489 237 2 74 561 44 498 1.17e-130 400
MsG0480023743.01.T01 MTR_3g073860 29.216 510 287 8 41 485 10 510 1.15e-57 211
MsG0480023743.01.T01 MTR_3g073820 29.424 486 274 7 65 485 7 488 2.45e-57 209
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023743.01.T02 AT5G35360 79.144 561 72 6 1 556 1 521 0.0 872
MsG0480023743.01.T02 AT5G35360 79.144 561 72 6 1 556 1 521 0.0 870
MsG0480023743.01.T02 AT5G35360 83.707 491 69 5 1 486 1 485 0.0 819
MsG0480023743.01.T02 AT1G03090 44.490 490 234 4 75 561 38 492 1.48e-135 413
MsG0480023743.01.T02 AT1G03090 43.061 490 221 5 75 561 38 472 4.34e-126 388
MsG0480023743.01.T02 AT1G36160 30.103 485 270 7 66 485 28 508 8.54e-59 214
MsG0480023743.01.T02 AT1G36160 30.103 485 270 7 66 485 28 508 8.54e-59 214
MsG0480023743.01.T02 AT1G36180 29.691 485 272 7 66 485 130 610 1.34e-57 210
MsG0480023743.01.T02 AT1G36180 30.375 293 162 5 66 326 130 412 4.44e-34 135
MsG0480023743.01.T02 AT1G36180 30.576 278 157 4 66 311 130 403 5.25e-34 134
MsG0480023743.01.T01 AT5G35360 79.144 561 72 6 1 556 1 521 0.0 872
MsG0480023743.01.T01 AT5G35360 79.144 561 72 6 1 556 1 521 0.0 870
MsG0480023743.01.T01 AT5G35360 83.707 491 69 5 1 486 1 485 0.0 819
MsG0480023743.01.T01 AT1G03090 44.490 490 234 4 75 561 38 492 1.48e-135 413
MsG0480023743.01.T01 AT1G03090 43.061 490 221 5 75 561 38 472 4.34e-126 388
MsG0480023743.01.T01 AT1G36160 30.103 485 270 7 66 485 28 508 8.54e-59 214
MsG0480023743.01.T01 AT1G36160 30.103 485 270 7 66 485 28 508 8.54e-59 214
MsG0480023743.01.T01 AT1G36180 29.691 485 272 7 66 485 130 610 1.34e-57 210
MsG0480023743.01.T01 AT1G36180 30.375 293 162 5 66 326 130 412 4.44e-34 135
MsG0480023743.01.T01 AT1G36180 30.576 278 157 4 66 311 130 403 5.25e-34 134

Find 29 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAATTACAGAAACAATTA+TGG 0.271829 4:-89294483 MsG0480023743.01.T01:intron
AGTTATTAGTAATAGTATAT+TGG 0.331209 4:+89294687 None:intergenic
ATTCTCATTCAATATCCTAT+TGG 0.331577 4:-89294608 MsG0480023743.01.T01:five_prime_UTR
TTGGAATGGGAATGGGAATG+GGG 0.340841 4:+89294646 None:intergenic
TATCCTATTGGTATTGGTAT+TGG 0.369355 4:-89294596 MsG0480023743.01.T01:intron
ATTCAATATCCTATTGGTAT+TGG 0.375288 4:-89294602 MsG0480023743.01.T01:five_prime_UTR
GTTGTTGTTAGATTTAGATT+TGG 0.405432 4:-89294773 MsG0480023743.01.T01:five_prime_UTR
GTTGGAATGGGAATGGGAAT+GGG 0.425642 4:+89294645 None:intergenic
TGGAATGGGAATGGGAATGG+GGG 0.445637 4:+89294647 None:intergenic
TGTTGGAATGGGAATGGGAA+TGG 0.453740 4:+89294644 None:intergenic
CTACCAATACCAATACCAAT+AGG 0.479858 4:+89294593 None:intergenic
AAAATGAAAATGTGTTGGAA+TGG 0.516309 4:+89294632 None:intergenic
TAATAGTATATTGGTGTCGA+TGG 0.518787 4:+89294696 None:intergenic
AAATGAAAATGTGTTGGAAT+GGG 0.526549 4:+89294633 None:intergenic
TGTCGATGGAAACGAGGGTG+AGG 0.530958 4:+89294710 None:intergenic
AAAATGTGTTGGAATGGGAA+TGG 0.553050 4:+89294638 None:intergenic
GAATGAAAATGAAAATGTGT+TGG 0.555668 4:+89294627 None:intergenic
TTGTTAGATTTAGATTTGGA+CGG 0.558253 4:-89294769 MsG0480023743.01.T01:five_prime_UTR
AAATGTGTTGGAATGGGAAT+GGG 0.559041 4:+89294639 None:intergenic
GTCGATGGAAACGAGGGTGA+GGG 0.571121 4:+89294711 None:intergenic
TGAGTTACTGTGACGGTGGA+TGG 0.580607 4:+89294422 None:intergenic
TACTGTGACGGTGGATGGTG+AGG 0.604032 4:+89294427 None:intergenic
AACAGAGATAGTGAATGTGA+TGG 0.616145 4:+89294504 None:intergenic
AATTACAGAAACAATTATGG+AGG 0.622062 4:-89294480 MsG0480023743.01.T01:intron
TATTGGTGTCGATGGAAACG+AGG 0.627719 4:+89294704 None:intergenic
ATTGGTGTCGATGGAAACGA+GGG 0.660984 4:+89294705 None:intergenic
ATTGTGAGTTACTGTGACGG+TGG 0.682182 4:+89294418 None:intergenic
GGTGAGAGATTTGCATGCTG+CGG 0.698451 4:+89294448 None:intergenic
GTAATTGTGAGTTACTGTGA+CGG 0.775391 4:+89294415 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTAATGGTATTATA+GGG + Chr4:89289884-89289903 None:intergenic 10.0%
!! AAATCAATAAAAAAAAAACT+CGG + Chr4:89289133-89289152 None:intergenic 10.0%
!! ACATTTAAAAAAATATGTAT+TGG - Chr4:89288491-89288510 MsG0480023743.01.T01:intron 10.0%
!! CAAACATAATAATATAATTA+TGG + Chr4:89288467-89288486 None:intergenic 10.0%
!! TAAATAATTAATGGTATTAT+AGG + Chr4:89289885-89289904 None:intergenic 10.0%
!! TTTACAAAATAATTATTGAA+CGG + Chr4:89294588-89294607 None:intergenic 10.0%
!!! ATTCAAAGTATTTAATAAAT+AGG - Chr4:89293116-89293135 MsG0480023743.01.T01:CDS 10.0%
!!! GTTATTTTTTTATTTTTATC+AGG - Chr4:89288674-89288693 MsG0480023743.01.T01:intron 10.0%
!!! TTTTTTTTATTGATTTACTT+GGG - Chr4:89289137-89289156 MsG0480023743.01.T01:intron 10.0%
!!! TTTTTTTTTATTGATTTACT+TGG - Chr4:89289136-89289155 MsG0480023743.01.T01:intron 10.0%
!! AAATGATAAAAACATTTCAA+GGG + Chr4:89288400-89288419 None:intergenic 15.0%
!! AATCAATAAAAAAAAAACTC+GGG + Chr4:89289132-89289151 None:intergenic 15.0%
!! AGTTATTAGTAATAGTATAT+TGG + Chr4:89286297-89286316 None:intergenic 15.0%
!! ATGAGATGATAAATAATTAA+TGG + Chr4:89289894-89289913 None:intergenic 15.0%
!! GTATATTATAGTAAACAAAA+TGG + Chr4:89293626-89293645 None:intergenic 15.0%
!! TTAAATTACAGAAACAATTA+TGG - Chr4:89286498-89286517 MsG0480023743.01.T01:three_prime_UTR 15.0%
!! TTGAAATATCATTACATAAT+GGG + Chr4:89290718-89290737 None:intergenic 15.0%
!! TTGACATAAAATACTATTAA+AGG + Chr4:89293854-89293873 None:intergenic 15.0%
!!! AAAAGATTAAAGTAATGTTT+TGG - Chr4:89290473-89290492 MsG0480023743.01.T01:intron 15.0%
!!! AATTAATTCTTTTGTTTTTG+TGG - Chr4:89291527-89291546 MsG0480023743.01.T01:CDS 15.0%
!!! ATATGTAATCTTCTATTTTT+TGG + Chr4:89291952-89291971 None:intergenic 15.0%
!!! ATGATATTAGTTTATAAACA+TGG - Chr4:89287542-89287561 MsG0480023743.01.T01:intron 15.0%
!!! ATTAATATTAATTTGAGTTC+AGG + Chr4:89289033-89289052 None:intergenic 15.0%
!!! ATTAATTCTTTTGTTTTTGT+GGG - Chr4:89291528-89291547 MsG0480023743.01.T01:CDS 15.0%
!!! TACTATAATATACGTTTTAA+GGG - Chr4:89293633-89293652 MsG0480023743.01.T01:intron 15.0%
!!! TGAAAATTTTAAATTTCTTG+TGG - Chr4:89288355-89288374 MsG0480023743.01.T01:intron 15.0%
!!! TTACTATAATATACGTTTTA+AGG - Chr4:89293632-89293651 MsG0480023743.01.T01:intron 15.0%
!!! TTTATCTGTTTAAAATCAAA+TGG - Chr4:89288976-89288995 MsG0480023743.01.T01:intron 15.0%
!!! TTTTTTTATTGATTTACTTG+GGG - Chr4:89289138-89289157 MsG0480023743.01.T01:intron 15.0%
!! AATAATTTCACAAACTCTTT+AGG + Chr4:89288893-89288912 None:intergenic 20.0%
!! AATCAAATTCAATTGTTAGT+AGG + Chr4:89291160-89291179 None:intergenic 20.0%
!! AATTATATCTATAGAGATTG+TGG - Chr4:89289560-89289579 MsG0480023743.01.T01:intron 20.0%
!! AATTATTGAACGGATAATTA+TGG + Chr4:89294578-89294597 None:intergenic 20.0%
!! AGAAGATTACATATATACAT+TGG - Chr4:89291958-89291977 MsG0480023743.01.T01:intron 20.0%
!! AGATTTAAGCAAAAAACTTA+AGG - Chr4:89289087-89289106 MsG0480023743.01.T01:intron 20.0%
!! ATCAATAAAAAAAAAACTCG+GGG + Chr4:89289131-89289150 None:intergenic 20.0%
!! ATTATTGAACGGATAATTAT+GGG + Chr4:89294577-89294596 None:intergenic 20.0%
!! ATTTCTAATATACTTGTCTA+GGG - Chr4:89290983-89291002 MsG0480023743.01.T01:intron 20.0%
!! CAAATGATAAAAACATTTCA+AGG + Chr4:89288401-89288420 None:intergenic 20.0%
!! CTACTGTAATAAATACTTAA+GGG - Chr4:89289926-89289945 MsG0480023743.01.T01:intron 20.0%
!! CTTGAAATATCATTACATAA+TGG + Chr4:89290719-89290738 None:intergenic 20.0%
!! GAAGATTACATATATACATT+GGG - Chr4:89291959-89291978 MsG0480023743.01.T01:intron 20.0%
!! TAGACAAGTATATTAGAAAT+CGG + Chr4:89290983-89291002 None:intergenic 20.0%
!! TATAAATATCGATACCAATA+GGG - Chr4:89292693-89292712 MsG0480023743.01.T01:intron 20.0%
!! TATTGAAAGATCACATATAA+TGG + Chr4:89294131-89294150 None:intergenic 20.0%
!! TATTTATTACAGTAGGAAAT+AGG + Chr4:89289921-89289940 None:intergenic 20.0%
!! TCAATATGAATAATTACTTC+AGG + Chr4:89290750-89290769 None:intergenic 20.0%
!! TCATACAAATCAAGAAAATT+AGG - Chr4:89292880-89292899 MsG0480023743.01.T01:intron 20.0%
!! TCTAAATATAAAAGCTTCAT+TGG - Chr4:89292851-89292870 MsG0480023743.01.T01:intron 20.0%
!! TGTTAAATCACAAAAATATG+TGG - Chr4:89291089-89291108 MsG0480023743.01.T01:intron 20.0%
!! TTAAATTTCATCCAATGAAA+GGG - Chr4:89294269-89294288 MsG0480023743.01.T01:CDS 20.0%
!! TTACAAGCCTAATATTTAAA+CGG + Chr4:89292993-89293012 None:intergenic 20.0%
!! TTATAAGTAAATTGATGTCA+TGG + Chr4:89287994-89288013 None:intergenic 20.0%
!! TTATGATAATCAATTGTTGT+AGG + Chr4:89293773-89293792 None:intergenic 20.0%
!! TTATTAGACAAACATAAAGA+TGG + Chr4:89291432-89291451 None:intergenic 20.0%
!! TTGAATTTGATTAACATTAG+CGG - Chr4:89291168-89291187 MsG0480023743.01.T01:intron 20.0%
!! TTGATTGAAATTTGTATTCT+TGG - Chr4:89292802-89292821 MsG0480023743.01.T01:intron 20.0%
!!! ATCACATATAATGGTTTTAA+AGG + Chr4:89294122-89294141 None:intergenic 20.0%
!!! ATTGAAATTTTGTTGATCTA+TGG - Chr4:89292069-89292088 MsG0480023743.01.T01:intron 20.0%
!!! CTTGAAATGTTTTTATCATT+TGG - Chr4:89288399-89288418 MsG0480023743.01.T01:intron 20.0%
!!! TATGATTTTTTCTTATCGAA+TGG - Chr4:89291045-89291064 MsG0480023743.01.T01:intron 20.0%
!!! TTCATCGATTTATGTTTTTA+TGG - Chr4:89290141-89290160 MsG0480023743.01.T01:CDS 20.0%
!!! TTCTTTTTCTCATTTGAAAA+TGG - Chr4:89291999-89292018 MsG0480023743.01.T01:intron 20.0%
!!! TTTTGCTTAAATCTGATTAT+AGG + Chr4:89289081-89289100 None:intergenic 20.0%
!!! TTTTGTGATTTAACAAACTT+GGG + Chr4:89291084-89291103 None:intergenic 20.0%
!!! TTTTTATCTTGAATTCACTA+AGG + Chr4:89290380-89290399 None:intergenic 20.0%
!!! TTTTTGTGATTTAACAAACT+TGG + Chr4:89291085-89291104 None:intergenic 20.0%
! AAAACTAATCGAGTAACAAA+AGG + Chr4:89292398-89292417 None:intergenic 25.0%
! AAAATGAAAATGTGTTGGAA+TGG + Chr4:89286352-89286371 None:intergenic 25.0%
! AAATATTAGTGCTAGGTTAT+GGG - Chr4:89294643-89294662 MsG0480023743.01.T01:five_prime_UTR 25.0%
! AAATGAAAATGTGTTGGAAT+GGG + Chr4:89286351-89286370 None:intergenic 25.0%
! AAATTGGAATTCAGTTCAAA+TGG + Chr4:89288160-89288179 None:intergenic 25.0%
! AATTACAGAAACAATTATGG+AGG - Chr4:89286501-89286520 MsG0480023743.01.T01:three_prime_UTR 25.0%
! AATTGGAATTCAGTTCAAAT+GGG + Chr4:89288159-89288178 None:intergenic 25.0%
! ACAATGTAATCATTTCAGTT+AGG + Chr4:89290500-89290519 None:intergenic 25.0%
! AGAGTTTGTGAAATTATTAC+AGG - Chr4:89288895-89288914 MsG0480023743.01.T01:intron 25.0%
! ATAACCTAGCACTAATATTT+GGG + Chr4:89294643-89294662 None:intergenic 25.0%
! ATATGATAAGTACCTTTGTA+AGG - Chr4:89292529-89292548 MsG0480023743.01.T01:intron 25.0%
! ATGAAAAGAGAAAAAAGTTG+AGG - Chr4:89293087-89293106 MsG0480023743.01.T01:CDS 25.0%
! ATTCAATATCCTATTGGTAT+TGG - Chr4:89286379-89286398 MsG0480023743.01.T01:three_prime_UTR 25.0%
! ATTCAATTGTTAGTAGGTAT+AGG + Chr4:89291154-89291173 None:intergenic 25.0%
! ATTCTCATTCAATATCCTAT+TGG - Chr4:89286373-89286392 MsG0480023743.01.T01:three_prime_UTR 25.0%
! CAATGTAATCATTTCAGTTA+GGG + Chr4:89290499-89290518 None:intergenic 25.0%
! CCTACTGTAATAAATACTTA+AGG - Chr4:89289925-89289944 MsG0480023743.01.T01:intron 25.0%
! CCTTAAGTATTTATTACAGT+AGG + Chr4:89289928-89289947 None:intergenic 25.0%
! CTTAAATTTCATCCAATGAA+AGG - Chr4:89294268-89294287 MsG0480023743.01.T01:CDS 25.0%
! GAATGAAAATGAAAATGTGT+TGG + Chr4:89286357-89286376 None:intergenic 25.0%
! GATCTTTCAATACTATTTCA+TGG - Chr4:89294139-89294158 MsG0480023743.01.T01:CDS 25.0%
! GATTTCTAATATACTTGTCT+AGG - Chr4:89290982-89291001 MsG0480023743.01.T01:intron 25.0%
! GTATAAATATCGATACCAAT+AGG - Chr4:89292692-89292711 MsG0480023743.01.T01:intron 25.0%
! GTATTACAGGATTTCAAAAA+TGG - Chr4:89293916-89293935 MsG0480023743.01.T01:intron 25.0%
! TAAATGTACTTGAACCTAAT+AGG - Chr4:89291010-89291029 MsG0480023743.01.T01:intron 25.0%
! TAAATTTCATCCAATGAAAG+GGG - Chr4:89294270-89294289 MsG0480023743.01.T01:CDS 25.0%
! TAATCGGTAGAAATATACTT+GGG - Chr4:89288298-89288317 MsG0480023743.01.T01:intron 25.0%
! TACAAGCCTAATATTTAAAC+GGG + Chr4:89292992-89293011 None:intergenic 25.0%
! TATATATTCGCATTAGATGT+TGG + Chr4:89292370-89292389 None:intergenic 25.0%
! TATGTAATCTATTGTGCATT+AGG + Chr4:89291918-89291937 None:intergenic 25.0%
! TATGTGTAGATAACTCTAAA+AGG + Chr4:89289810-89289829 None:intergenic 25.0%
! TGAAAAGAGAAAAAAGTTGA+GGG - Chr4:89293088-89293107 MsG0480023743.01.T01:CDS 25.0%
! TTAATCGGTAGAAATATACT+TGG - Chr4:89288297-89288316 MsG0480023743.01.T01:intron 25.0%
! TTCAAAATTATATCTCCTGT+TGG - Chr4:89294037-89294056 MsG0480023743.01.T01:CDS 25.0%
! TTCAATTGTTAGTAGGTATA+GGG + Chr4:89291153-89291172 None:intergenic 25.0%
! TTCATTGGATGAAATTTAAG+TGG + Chr4:89294268-89294287 None:intergenic 25.0%
! TTGTTAGATTTAGATTTGGA+CGG - Chr4:89286212-89286231 MsG0480023743.01.T01:three_prime_UTR 25.0%
!! AACACTTTCAATTTTGTTAC+AGG - Chr4:89293743-89293762 MsG0480023743.01.T01:CDS 25.0%
!! AAGCTTTTATATTTAGAGAC+GGG + Chr4:89292848-89292867 None:intergenic 25.0%
!! AAGTATATTTCTACCGATTA+AGG + Chr4:89288298-89288317 None:intergenic 25.0%
!! ACAACAATCATCTAAAATCA+TGG + Chr4:89294675-89294694 None:intergenic 25.0%
!! AGTATATTTCTACCGATTAA+GGG + Chr4:89288297-89288316 None:intergenic 25.0%
!! AGTTTTACCAGATAATTTGA+AGG + Chr4:89287777-89287796 None:intergenic 25.0%
!! CTATAAAAGTGCAAGTAATA+AGG - Chr4:89290018-89290037 MsG0480023743.01.T01:intron 25.0%
!! GAAGCTTTTATATTTAGAGA+CGG + Chr4:89292849-89292868 None:intergenic 25.0%
!! GTTGTTGTTAGATTTAGATT+TGG - Chr4:89286208-89286227 MsG0480023743.01.T01:three_prime_UTR 25.0%
!! GTTTTACCAGATAATTTGAA+GGG + Chr4:89287776-89287795 None:intergenic 25.0%
!! TATCTAGCAAGTTGAATTTA+AGG - Chr4:89294761-89294780 MsG0480023743.01.T01:five_prime_UTR 25.0%
!! TTTTACCAGATAATTTGAAG+GGG + Chr4:89287775-89287794 None:intergenic 25.0%
!!! AAATTGTTGATTTATGAGCA+TGG - Chr4:89291364-89291383 MsG0480023743.01.T01:intron 25.0%
!!! ACAACACTTATTAGTTTTCT+TGG + Chr4:89289833-89289852 None:intergenic 25.0%
!!! ATATCATTTTGATGCATTGA+TGG + Chr4:89287529-89287548 None:intergenic 25.0%
!!! ATGTTTTTATCATTTGGAAC+TGG - Chr4:89288405-89288424 MsG0480023743.01.T01:intron 25.0%
!!! GTTCAAGTTTTGAGAATATT+TGG - Chr4:89294171-89294190 MsG0480023743.01.T01:CDS 25.0%
!!! TTACTGCATTTTTGGTTAAT+TGG - Chr4:89288122-89288141 MsG0480023743.01.T01:intron 25.0%
!!! TTTTGAAATCCTGTAATACA+AGG + Chr4:89293915-89293934 None:intergenic 25.0%
!!! TTTTTATTTTTATCAGGGCT+GGG - Chr4:89288680-89288699 MsG0480023743.01.T01:intron 25.0%
!!! TTTTTTATTTTTATCAGGGC+TGG - Chr4:89288679-89288698 MsG0480023743.01.T01:intron 25.0%
AAACTTAAGGAAGCAAGAAA+TGG - Chr4:89289100-89289119 MsG0480023743.01.T01:intron 30.0%
AAAGCTAAGAGTTTAAACCA+AGG + Chr4:89293710-89293729 None:intergenic 30.0%
AAAGTGCAAGTAATAAGGAA+TGG - Chr4:89290023-89290042 MsG0480023743.01.T01:intron 30.0%
AAATGTAGTAAGTTGTGCTT+TGG + Chr4:89288262-89288281 None:intergenic 30.0%
AATAAGAGCTCATCATGTAT+AGG - Chr4:89291281-89291300 MsG0480023743.01.T01:intron 30.0%
ACCATAAAATCCAAAACACT+TGG + Chr4:89292029-89292048 None:intergenic 30.0%
AGATAGTCATAATATCCATC+AGG + Chr4:89294460-89294479 None:intergenic 30.0%
AGATGCTCTTCATGTTAAAT+TGG - Chr4:89286950-89286969 MsG0480023743.01.T01:CDS 30.0%
ATAAGTACCTTTGTAAGGTT+TGG - Chr4:89292534-89292553 MsG0480023743.01.T01:intron 30.0%
ATAGGTAGATTTGACAACTA+TGG + Chr4:89289063-89289082 None:intergenic 30.0%
ATCCTTTAGATATCTGTACT+TGG - Chr4:89293413-89293432 MsG0480023743.01.T01:intron 30.0%
ATGCAATATCCTTGTATTAC+AGG - Chr4:89293903-89293922 MsG0480023743.01.T01:intron 30.0%
CAAATATTAGTGCTAGGTTA+TGG - Chr4:89294642-89294661 MsG0480023743.01.T01:five_prime_UTR 30.0%
CAAATGTCAACCAGAAAAAT+TGG + Chr4:89288176-89288195 None:intergenic 30.0%
CAACAGTGCAAATTCTTTAT+AGG + Chr4:89294493-89294512 None:intergenic 30.0%
CAACATAATCGGGATAAATA+TGG + Chr4:89292170-89292189 None:intergenic 30.0%
CAATACTATTTCATGGCTAA+TGG - Chr4:89294146-89294165 MsG0480023743.01.T01:CDS 30.0%
CAATTAAAAGACCTTGAACT+TGG - Chr4:89290625-89290644 MsG0480023743.01.T01:intron 30.0%
CATAACCTAGCACTAATATT+TGG + Chr4:89294644-89294663 None:intergenic 30.0%
CATATGATAAACCAAGTTCA+AGG + Chr4:89290639-89290658 None:intergenic 30.0%
CCATATGCAAACGATAAAAA+GGG - Chr4:89289004-89289023 MsG0480023743.01.T01:intron 30.0%
CTATCAAAAGTTCTTGTCTA+GGG + Chr4:89291459-89291478 None:intergenic 30.0%
CTGCAATATAATACAGACTA+TGG + Chr4:89288949-89288968 None:intergenic 30.0%
CTTACTTAAACCAGTTGAAT+GGG - Chr4:89288750-89288769 MsG0480023743.01.T01:intron 30.0%
CTTCTCATCAATGCAATAAT+TGG - Chr4:89289632-89289651 MsG0480023743.01.T01:intron 30.0%
CTTGAACTTGGTTTATCATA+TGG - Chr4:89290637-89290656 MsG0480023743.01.T01:intron 30.0%
CTTGTGACTACTTTAGTTAA+GGG - Chr4:89287374-89287393 MsG0480023743.01.T01:intron 30.0%
GAAAAGAGAAAAAAGTTGAG+GGG - Chr4:89293089-89293108 MsG0480023743.01.T01:CDS 30.0%
GAAAATAGTTATCACCCTAT+TGG + Chr4:89292710-89292729 None:intergenic 30.0%
GAAGATGGTATTAGTTAACA+AGG - Chr4:89294407-89294426 MsG0480023743.01.T01:intron 30.0%
GACAAACATAAAGATGGTAA+TGG + Chr4:89291426-89291445 None:intergenic 30.0%
GACACGAGTATATACATTAT+TGG + Chr4:89288227-89288246 None:intergenic 30.0%
TAAACTTATCCTTGACATAG+AGG - Chr4:89293790-89293809 MsG0480023743.01.T01:CDS 30.0%
TAACATTAGCTGATTGTACA+AGG - Chr4:89292742-89292761 MsG0480023743.01.T01:intron 30.0%
TAACCTAGCACTAATATTTG+GGG + Chr4:89294642-89294661 None:intergenic 30.0%
TACAGAAAGATAAGAGATTG+AGG + Chr4:89290251-89290270 None:intergenic 30.0%
TATCTTGAATTCACTAAGGT+GGG + Chr4:89290376-89290395 None:intergenic 30.0%
TATTTCCCCTTCAAATTATC+TGG - Chr4:89287767-89287786 MsG0480023743.01.T01:intron 30.0%
TCAAGGATTAATCCCATAAT+TGG + Chr4:89288647-89288666 None:intergenic 30.0%
TCAATCAGAATCAATTGTGA+AGG + Chr4:89289259-89289278 None:intergenic 30.0%
TCAATTAATGTGCAGGTAAT+TGG - Chr4:89291244-89291263 MsG0480023743.01.T01:intron 30.0%
TCACTACCCGTTTAAATATT+AGG - Chr4:89292983-89293002 MsG0480023743.01.T01:intron 30.0%
TCTATCAAAAGTTCTTGTCT+AGG + Chr4:89291460-89291479 None:intergenic 30.0%
TCTTGTGACTACTTTAGTTA+AGG - Chr4:89287373-89287392 MsG0480023743.01.T01:intron 30.0%
TGAAATTGCAGATTTCAGAA+GGG + Chr4:89289507-89289526 None:intergenic 30.0%
TGTACAATACTGCATTTCTT+TGG - Chr4:89287344-89287363 MsG0480023743.01.T01:intron 30.0%
TTACCTGCACATTAATTGAA+AGG + Chr4:89291243-89291262 None:intergenic 30.0%
TTATCTTGAATTCACTAAGG+TGG + Chr4:89290377-89290396 None:intergenic 30.0%
TTCAACACTTCTTCTCTTAT+TGG - Chr4:89294218-89294237 MsG0480023743.01.T01:CDS 30.0%
TTGATAGGAAAACACTTGAT+AGG - Chr4:89294078-89294097 MsG0480023743.01.T01:CDS 30.0%
TTGTGTCTTGAGATATGATA+TGG - Chr4:89293204-89293223 MsG0480023743.01.T01:intron 30.0%
TTTAGTGATTCCAAATGTTC+TGG - Chr4:89287177-89287196 MsG0480023743.01.T01:intron 30.0%
! AATGCAGAAGATGCTTTTAA+GGG - Chr4:89291774-89291793 MsG0480023743.01.T01:intron 30.0%
! AATTCTACCTGTTGTTTGAA+AGG + Chr4:89292103-89292122 None:intergenic 30.0%
! AGAACAAAGGAGTTTGTTTA+AGG - Chr4:89293521-89293540 MsG0480023743.01.T01:intron 30.0%
! ATTTTCTCCTTTCAAACAAC+AGG - Chr4:89292093-89292112 MsG0480023743.01.T01:CDS 30.0%
! CACAATTGATTCTGATTGAA+GGG - Chr4:89289260-89289279 MsG0480023743.01.T01:intron 30.0%
! CTGTAGCAGAAGAAATTTTA+GGG - Chr4:89289228-89289247 MsG0480023743.01.T01:CDS 30.0%
! GAACTGAATTCCAATTTTTC+TGG - Chr4:89288163-89288182 MsG0480023743.01.T01:intron 30.0%
! GATCATGGAGTCAATTTTAT+TGG - Chr4:89287286-89287305 MsG0480023743.01.T01:CDS 30.0%
! TATAATTCCGTGAGCTTTAA+TGG - Chr4:89290083-89290102 MsG0480023743.01.T01:CDS 30.0%
! TATGGTAATGTTGTTCACTT+TGG - Chr4:89290186-89290205 MsG0480023743.01.T01:CDS 30.0%
! TCACAATTGATTCTGATTGA+AGG - Chr4:89289259-89289278 MsG0480023743.01.T01:intron 30.0%
! TCTGTAGCAGAAGAAATTTT+AGG - Chr4:89289227-89289246 MsG0480023743.01.T01:CDS 30.0%
! TGTCACTGTTTTATAAGTCA+TGG - Chr4:89287076-89287095 MsG0480023743.01.T01:intron 30.0%
! TTATCGAATGGATTTGTACT+CGG - Chr4:89291057-89291076 MsG0480023743.01.T01:intron 30.0%
! TTTTATATTTAGAGACGGGA+CGG + Chr4:89292844-89292863 None:intergenic 30.0%
! TTTTCTTTTTTTCTCTGTGC+AGG - Chr4:89287152-89287171 MsG0480023743.01.T01:intron 30.0%
!! AAAAAATAACCACTGACTCA+AGG + Chr4:89288664-89288683 None:intergenic 30.0%
!! AAAAATTTCTAGCTACTAGC+TGG - Chr4:89287615-89287634 MsG0480023743.01.T01:intron 30.0%
!! AACATGGTGTTATTGTATGA+TGG - Chr4:89287558-89287577 MsG0480023743.01.T01:intron 30.0%
!! ACATGGTGTTATTGTATGAT+GGG - Chr4:89287559-89287578 MsG0480023743.01.T01:intron 30.0%
!! ATGAAGAGCATCTTTATCAA+TGG + Chr4:89286943-89286962 None:intergenic 30.0%
!! CTTATCATTGTTTTTCCTAC+AGG - Chr4:89291710-89291729 MsG0480023743.01.T01:intron 30.0%
!! TAATAGTATATTGGTGTCGA+TGG + Chr4:89286288-89286307 None:intergenic 30.0%
!! TATCCTATTGGTATTGGTAT+TGG - Chr4:89286385-89286404 MsG0480023743.01.T01:three_prime_UTR 30.0%
!! TTGTTTTTCTGTCCCTTAAT+CGG - Chr4:89288282-89288301 MsG0480023743.01.T01:intron 30.0%
!! TTTATGTTTTTATGGCTTGC+AGG - Chr4:89290149-89290168 MsG0480023743.01.T01:CDS 30.0%
!! TTTTTATCATTTGGAACTGG+AGG - Chr4:89288408-89288427 MsG0480023743.01.T01:intron 30.0%
!!! AATTCTTTTGTTTTTGTGGG+TGG - Chr4:89291531-89291550 MsG0480023743.01.T01:CDS 30.0%
!!! ATTCTTTTGTTTTTGTGGGT+GGG - Chr4:89291532-89291551 MsG0480023743.01.T01:CDS 30.0%
!!! TCAATTGCTTTTTCTCTAGT+CGG + Chr4:89293324-89293343 None:intergenic 30.0%
!!! TTTTATTTTTATCAGGGCTG+GGG - Chr4:89288681-89288700 MsG0480023743.01.T01:intron 30.0%
AAAATGTGTTGGAATGGGAA+TGG + Chr4:89286346-89286365 None:intergenic 35.0%
AAATGTGTTGGAATGGGAAT+GGG + Chr4:89286345-89286364 None:intergenic 35.0%
AACAGAGATAGTGAATGTGA+TGG + Chr4:89286480-89286499 None:intergenic 35.0%
AAGCAATTGAACGCATGAAA+AGG - Chr4:89293334-89293353 MsG0480023743.01.T01:intron 35.0%
AAGCTCACGGAATTATAAAG+TGG + Chr4:89290080-89290099 None:intergenic 35.0%
AATCTACCTTGATCATCACA+GGG + Chr4:89288076-89288095 None:intergenic 35.0%
AATGTGCAGGTAATTGGTAT+GGG - Chr4:89291250-89291269 MsG0480023743.01.T01:intron 35.0%
AATGTTGCTATGTGCAAGTA+TGG - Chr4:89291319-89291338 MsG0480023743.01.T01:intron 35.0%
ACAAACATATGGTGTTTCTC+AGG - Chr4:89288823-89288842 MsG0480023743.01.T01:CDS 35.0%
ACACACATATTCCTCATCAA+TGG + Chr4:89289325-89289344 None:intergenic 35.0%
ACAGGATTTCAAAAATGGCA+AGG - Chr4:89293921-89293940 MsG0480023743.01.T01:intron 35.0%
ACAGTCTTTCACGATATGTT+TGG - Chr4:89288724-89288743 MsG0480023743.01.T01:intron 35.0%
ACGAGTCAAATTCTTAGCTT+CGG + Chr4:89292450-89292469 None:intergenic 35.0%
ACTAATACCATCTTCTGTTG+TGG + Chr4:89294402-89294421 None:intergenic 35.0%
AGAAAAGCTTCGATACAAAC+AGG - Chr4:89291644-89291663 MsG0480023743.01.T01:intron 35.0%
AGCAATTGAACGCATGAAAA+GGG - Chr4:89293335-89293354 MsG0480023743.01.T01:intron 35.0%
AGTCCACATAAATTGGCAAA+GGG + Chr4:89288802-89288821 None:intergenic 35.0%
ATATTTATGTACCCTAGCGA+TGG - Chr4:89294012-89294031 MsG0480023743.01.T01:CDS 35.0%
ATGTTACGAAGAGAACAGAT+TGG + Chr4:89292230-89292249 None:intergenic 35.0%
ATGTTGCTATGTGCAAGTAT+GGG - Chr4:89291320-89291339 MsG0480023743.01.T01:intron 35.0%
ATTCAATGTTGTCATCACTC+AGG + Chr4:89293021-89293040 None:intergenic 35.0%
ATTCGTACTGCTCATGAATT+GGG - Chr4:89286891-89286910 MsG0480023743.01.T01:intron 35.0%
ATTCTATTTCAGAGCTTCCA+AGG + Chr4:89289693-89289712 None:intergenic 35.0%
ATTGTTAGTAGGTATAGGGT+AGG + Chr4:89291149-89291168 None:intergenic 35.0%
CACACATATTCCTCATCAAT+GGG + Chr4:89289324-89289343 None:intergenic 35.0%
CACCAAGTACAGATATCTAA+AGG + Chr4:89293418-89293437 None:intergenic 35.0%
CAGGTTCTTGCAGATAAATA+TGG - Chr4:89290168-89290187 MsG0480023743.01.T01:CDS 35.0%
CAGTGCAAATTCTTTATAGG+AGG + Chr4:89294490-89294509 None:intergenic 35.0%
CCTCACAAAAATTGAACATG+TGG + Chr4:89291488-89291507 None:intergenic 35.0%
CTAATACCATCTTCTGTTGT+GGG + Chr4:89294401-89294420 None:intergenic 35.0%
CTACCAATACCAATACCAAT+AGG + Chr4:89286391-89286410 None:intergenic 35.0%
CTCTTCTATCAAATCAACTG+AGG + Chr4:89291604-89291623 None:intergenic 35.0%
CTTTGCACATGAACATTACA+TGG + Chr4:89288776-89288795 None:intergenic 35.0%
GAATCAACCAAACCTTACAA+AGG + Chr4:89292544-89292563 None:intergenic 35.0%
GATGGTATTAGTTAACAAGG+TGG - Chr4:89294410-89294429 MsG0480023743.01.T01:intron 35.0%
GCAGGTATAATATTAGACAC+TGG - Chr4:89287915-89287934 MsG0480023743.01.T01:intron 35.0%
GCCATATGCAAACGATAAAA+AGG - Chr4:89289003-89289022 MsG0480023743.01.T01:intron 35.0%
GCTGATGAATCTGTTTGTAT+TGG - Chr4:89286972-89286991 MsG0480023743.01.T01:CDS 35.0%
GCTTACTTAAACCAGTTGAA+TGG - Chr4:89288749-89288768 MsG0480023743.01.T01:intron 35.0%
GTAACTAATGCTGATATTGC+TGG - Chr4:89290582-89290601 MsG0480023743.01.T01:intron 35.0%
GTAATTGTGAGTTACTGTGA+CGG + Chr4:89286569-89286588 None:intergenic 35.0%
GTGAAATTGCAGATTTCAGA+AGG + Chr4:89289508-89289527 None:intergenic 35.0%
GTTAGTATAGTACGTACGAT+TGG + Chr4:89287013-89287032 None:intergenic 35.0%
GTTGAAATGTGTAGAGATCA+TGG - Chr4:89287271-89287290 MsG0480023743.01.T01:CDS 35.0%
GTTTGCAAAGTGAATGAACA+AGG + Chr4:89293501-89293520 None:intergenic 35.0%
GTTTGTCAGTCCACATAAAT+TGG + Chr4:89288809-89288828 None:intergenic 35.0%
TAATACCATCTTCTGTTGTG+GGG + Chr4:89294400-89294419 None:intergenic 35.0%
TAATGTGCAGGTAATTGGTA+TGG - Chr4:89291249-89291268 MsG0480023743.01.T01:intron 35.0%
TAGAGTTTATCCCATTGATG+AGG - Chr4:89289311-89289330 MsG0480023743.01.T01:intron 35.0%
TAGTGACTCTTGATAGAAGT+GGG + Chr4:89292969-89292988 None:intergenic 35.0%
TATAGAGATTGTGGATCCAA+AGG - Chr4:89289569-89289588 MsG0480023743.01.T01:intron 35.0%
TATCATATTACCCACCAATG+AGG + Chr4:89292517-89292536 None:intergenic 35.0%
TATTCGTACTGCTCATGAAT+TGG - Chr4:89286890-89286909 MsG0480023743.01.T01:intron 35.0%
TCACTTTGCAAACAGAACAA+AGG - Chr4:89293508-89293527 MsG0480023743.01.T01:intron 35.0%
TCTGAATCTGATTGATCCAA+GGG - Chr4:89286657-89286676 MsG0480023743.01.T01:intron 35.0%
TGAGGAAATCATTTCTGTCA+CGG + Chr4:89291586-89291605 None:intergenic 35.0%
TGCAAGTAATAAGGAATGGA+GGG - Chr4:89290027-89290046 MsG0480023743.01.T01:intron 35.0%
TTAAGTTTGTCAGCGAATGT+TGG - Chr4:89292417-89292436 MsG0480023743.01.T01:intron 35.0%
TTCTGAATCTGATTGATCCA+AGG - Chr4:89286656-89286675 MsG0480023743.01.T01:intron 35.0%
TTGATCCAAGGGTTTATTTG+CGG - Chr4:89286668-89286687 MsG0480023743.01.T01:intron 35.0%
TTTATATTTAGAGACGGGAC+GGG + Chr4:89292843-89292862 None:intergenic 35.0%
TTTCCCTTTGCCAATTTATG+TGG - Chr4:89288796-89288815 MsG0480023743.01.T01:CDS 35.0%
! AAGCATCTTCTGCATTGATA+CGG + Chr4:89291770-89291789 None:intergenic 35.0%
! AAGGGGTTCTTTTTACTTCA+TGG - Chr4:89290930-89290949 MsG0480023743.01.T01:intron 35.0%
! ACTTTTTGCAGCTGATTGTA+TGG - Chr4:89293295-89293314 MsG0480023743.01.T01:intron 35.0%
! AGAAGTACATTCAAAACCCA+AGG - Chr4:89289442-89289461 MsG0480023743.01.T01:intron 35.0%
! AGTTGCAGTTTTCTGATCTT+AGG - Chr4:89293579-89293598 MsG0480023743.01.T01:intron 35.0%
! ATATGAGATGCTTTTCTGAC+TGG - Chr4:89290421-89290440 MsG0480023743.01.T01:intron 35.0%
! ATTAGAAATCGGTTTCAACC+TGG + Chr4:89290972-89290991 None:intergenic 35.0%
! ATTGATTCTGATTGAAGGGA+TGG - Chr4:89289264-89289283 MsG0480023743.01.T01:intron 35.0%
! CAATGCAGAAGATGCTTTTA+AGG - Chr4:89291773-89291792 MsG0480023743.01.T01:intron 35.0%
! CCACATGTTCAATTTTTGTG+AGG - Chr4:89291485-89291504 MsG0480023743.01.T01:intron 35.0%
! CCCTTTTTATCGTTTGCATA+TGG + Chr4:89289007-89289026 None:intergenic 35.0%
! CTTTTTGCAGCTGATTGTAT+GGG - Chr4:89293296-89293315 MsG0480023743.01.T01:intron 35.0%
! GCAGTTCTTTTCAAAACAGA+AGG + Chr4:89293674-89293693 None:intergenic 35.0%
! GTTGCAGTTTTCTGATCTTA+GGG - Chr4:89293580-89293599 MsG0480023743.01.T01:intron 35.0%
! TAAGGTTTGGTTGATTCTTG+AGG - Chr4:89292547-89292566 MsG0480023743.01.T01:intron 35.0%
! TATCGAATGGATTTGTACTC+GGG - Chr4:89291058-89291077 MsG0480023743.01.T01:intron 35.0%
! TATGTGGACTGACAAACATA+TGG - Chr4:89288812-89288831 MsG0480023743.01.T01:CDS 35.0%
! TGAGTTCCTTTTGGATGAAA+GGG - Chr4:89290912-89290931 MsG0480023743.01.T01:intron 35.0%
! TGGAAATGATGGGGTTTATT+TGG - Chr4:89289419-89289438 MsG0480023743.01.T01:intron 35.0%
! TGGTGTCAAAGTTCCTATTA+CGG + Chr4:89288592-89288611 None:intergenic 35.0%
! TTGAGTTCCTTTTGGATGAA+AGG - Chr4:89290911-89290930 MsG0480023743.01.T01:intron 35.0%
! TTGCATTGATGAGAAGTTTG+AGG + Chr4:89289628-89289647 None:intergenic 35.0%
! TTGTCGTCTTGACAAGATTT+TGG - Chr4:89286836-89286855 MsG0480023743.01.T01:intron 35.0%
! TTTGACTTCCATCAATTTCC+TGG + Chr4:89293463-89293482 None:intergenic 35.0%
! TTTGGGATTTACGTAGTGAT+AGG - Chr4:89292670-89292689 MsG0480023743.01.T01:intron 35.0%
!! AAACTTCACCTTATTGGTTC+CGG + Chr4:89286751-89286770 None:intergenic 35.0%
!! AAATGGTTTGCCAAGTGTTT+TGG - Chr4:89292016-89292035 MsG0480023743.01.T01:intron 35.0%
!! AAGAGCATCTTTATCAATGG+TGG + Chr4:89286940-89286959 None:intergenic 35.0%
!! AATTTTGAAAGCCATCGCTA+GGG + Chr4:89294026-89294045 None:intergenic 35.0%
!! AGCTGGTAAGAAAGTTTTGT+TGG - Chr4:89287632-89287651 MsG0480023743.01.T01:CDS 35.0%
!! ATCATTGTTTTTCCTACAGG+AGG - Chr4:89291713-89291732 MsG0480023743.01.T01:intron 35.0%
!! ATTTCCACTTGACTTGTGTA+GGG + Chr4:89293058-89293077 None:intergenic 35.0%
!! CATGGTGTTATTGTATGATG+GGG - Chr4:89287560-89287579 MsG0480023743.01.T01:intron 35.0%
!! CTATTGGTATTGGTATTGGT+AGG - Chr4:89286389-89286408 MsG0480023743.01.T01:three_prime_UTR 35.0%
!! CTTTTAAGGGATTTAGACCA+GGG - Chr4:89291787-89291806 MsG0480023743.01.T01:intron 35.0%
!! GCCAAGTGTTTTGGATTTTA+TGG - Chr4:89292025-89292044 MsG0480023743.01.T01:intron 35.0%
!! TAATTTTGAAAGCCATCGCT+AGG + Chr4:89294027-89294046 None:intergenic 35.0%
!! TTTGTTTTCTGCAATCATCG+AGG + Chr4:89287598-89287617 None:intergenic 35.0%
!!! AAGAAAGTTTTGTTGGAGTG+TGG - Chr4:89287639-89287658 MsG0480023743.01.T01:CDS 35.0%
!!! TGCTGTGGAAATGTTTTGAT+AGG - Chr4:89294063-89294082 MsG0480023743.01.T01:CDS 35.0%
!!! TTCTTTTGTTTTTGTGGGTG+GGG - Chr4:89291533-89291552 MsG0480023743.01.T01:CDS 35.0%
AACACAGTAAAGAGAGAGCA+TGG - Chr4:89291216-89291235 MsG0480023743.01.T01:intron 40.0%
AAGAACCCCTTTCATCCAAA+AGG + Chr4:89290921-89290940 None:intergenic 40.0%
AATACCATCTTCTGTTGTGG+GGG + Chr4:89294399-89294418 None:intergenic 40.0%
ACACACTTGTGAAATTCCAC+AGG + Chr4:89290564-89290583 None:intergenic 40.0%
ACCTATGTAACCGATAGATG+CGG + Chr4:89290881-89290900 None:intergenic 40.0%
ACTAATGCTGATATTGCTGG+AGG - Chr4:89290585-89290604 MsG0480023743.01.T01:intron 40.0%
ACTCGTTTCTTGCAAGAATG+TGG - Chr4:89292464-89292483 MsG0480023743.01.T01:intron 40.0%
AGAAACCTTCTTCTACCTGT+TGG + Chr4:89289164-89289183 None:intergenic 40.0%
AGAGCAAATTCGTGTAGCTA+TGG - Chr4:89291620-89291639 MsG0480023743.01.T01:intron 40.0%
AGGTAGAAGAAGGTTTCTTG+CGG - Chr4:89289166-89289185 MsG0480023743.01.T01:intron 40.0%
AGTCAAGTGGAAATCATCGA+TGG - Chr4:89293064-89293083 MsG0480023743.01.T01:intron 40.0%
AGTGAACTGTGAAACACATG+TGG + Chr4:89293154-89293173 None:intergenic 40.0%
AGTGAATGAACAAGGTGCAA+AGG + Chr4:89293493-89293512 None:intergenic 40.0%
ATAGGAACTTTGACACCAGT+AGG - Chr4:89288594-89288613 MsG0480023743.01.T01:intron 40.0%
ATGTGCAGGTAATTGGTATG+GGG - Chr4:89291251-89291270 MsG0480023743.01.T01:intron 40.0%
ATTCAGTTCAAATGGGCACA+AGG + Chr4:89288152-89288171 None:intergenic 40.0%
CAATCTACCTTGATCATCAC+AGG + Chr4:89288077-89288096 None:intergenic 40.0%
CACACTTGTGAAATTCCACA+GGG + Chr4:89290563-89290582 None:intergenic 40.0%
CACGGAATTATAAAGTGGTC+AGG + Chr4:89290075-89290094 None:intergenic 40.0%
CAGAATCAATTGTGAAGGTC+TGG + Chr4:89289254-89289273 None:intergenic 40.0%
CAGGTATCTTGATGTATCAG+AGG - Chr4:89291811-89291830 MsG0480023743.01.T01:intron 40.0%
CAGTCCACATAAATTGGCAA+AGG + Chr4:89288803-89288822 None:intergenic 40.0%
CCAAAGGAAACATTCAAGGT+AGG - Chr4:89289585-89289604 MsG0480023743.01.T01:intron 40.0%
CCTACCTTGAATGTTTCCTT+TGG + Chr4:89289588-89289607 None:intergenic 40.0%
CGACAAGTAGATAAGAGCAA+AGG - Chr4:89289992-89290011 MsG0480023743.01.T01:intron 40.0%
CTATAGATATAATTCCCCCG+AGG + Chr4:89289554-89289573 None:intergenic 40.0%
CTATGACTCTCTTCTTGGAA+AGG - Chr4:89292200-89292219 MsG0480023743.01.T01:intron 40.0%
CTATGTGCAAGTATGGGTTT+GGG - Chr4:89291326-89291345 MsG0480023743.01.T01:intron 40.0%
CTCGATGACACTATTATCAC+AGG - Chr4:89293360-89293379 MsG0480023743.01.T01:intron 40.0%
CTCGTTTCTTGCAAGAATGT+GGG - Chr4:89292465-89292484 MsG0480023743.01.T01:intron 40.0%
CTCTGATACATCAAGATACC+TGG + Chr4:89291813-89291832 None:intergenic 40.0%
CTGCAATTTCACTGTAACCT+GGG - Chr4:89289516-89289535 MsG0480023743.01.T01:intron 40.0%
CTGCTGCATTTGGAAATGAT+GGG - Chr4:89289409-89289428 MsG0480023743.01.T01:CDS 40.0%
CTGTGATGATCAAGGTAGAT+TGG - Chr4:89288075-89288094 MsG0480023743.01.T01:intron 40.0%
CTTATCCTTGACATAGAGGT+AGG - Chr4:89293794-89293813 MsG0480023743.01.T01:CDS 40.0%
CTTGGAGGAACAACATAATC+GGG + Chr4:89292180-89292199 None:intergenic 40.0%
GACAACTAAGAACGAACAGA+GGG + Chr4:89289788-89289807 None:intergenic 40.0%
GAGCAAATTCGTGTAGCTAT+GGG - Chr4:89291621-89291640 MsG0480023743.01.T01:intron 40.0%
GAGGAAATCATTTCTGTCAC+GGG + Chr4:89291585-89291604 None:intergenic 40.0%
GCAGATTTCAGAAGGGAATA+GGG + Chr4:89289500-89289519 None:intergenic 40.0%
GCTGAAATTCATGTAGCTGT+GGG - Chr4:89294240-89294259 MsG0480023743.01.T01:CDS 40.0%
GCTTGGAGGAACAACATAAT+CGG + Chr4:89292181-89292200 None:intergenic 40.0%
GGATCCAAAGGAAACATTCA+AGG - Chr4:89289581-89289600 MsG0480023743.01.T01:intron 40.0%
GGTCCTTTCAATTAATGTGC+AGG - Chr4:89291237-89291256 MsG0480023743.01.T01:intron 40.0%
GTAGTATAGCAACTGAGATG+CGG + Chr4:89292264-89292283 None:intergenic 40.0%
GTAGTGACTCTTGATAGAAG+TGG + Chr4:89292970-89292989 None:intergenic 40.0%
GTCAAAGTTCCTATTACGGT+GGG + Chr4:89288588-89288607 None:intergenic 40.0%
GTGCAAGTAATAAGGAATGG+AGG - Chr4:89290026-89290045 MsG0480023743.01.T01:intron 40.0%
GTGGAATAAACAGCAACACA+AGG + Chr4:89286921-89286940 None:intergenic 40.0%
TATGCACAGCAGAACCTATT+AGG + Chr4:89291027-89291046 None:intergenic 40.0%
TATGTGCAAGTATGGGTTTG+GGG - Chr4:89291327-89291346 MsG0480023743.01.T01:intron 40.0%
TCACCCCAAATATTAGTGCT+AGG - Chr4:89294636-89294655 MsG0480023743.01.T01:five_prime_UTR 40.0%
TCAGCAAGAAAACCATATCC+AGG + Chr4:89287238-89287257 None:intergenic 40.0%
TCTGCAATTTCACTGTAACC+TGG - Chr4:89289515-89289534 MsG0480023743.01.T01:intron 40.0%
TGAGTACAATATCCTCCTGT+AGG + Chr4:89291728-89291747 None:intergenic 40.0%
TGCAATTTCACTGTAACCTG+GGG - Chr4:89289517-89289536 MsG0480023743.01.T01:intron 40.0%
TGCAGATTTCAGAAGGGAAT+AGG + Chr4:89289501-89289520 None:intergenic 40.0%
TGCTGCATTTGGAAATGATG+GGG - Chr4:89289410-89289429 MsG0480023743.01.T01:CDS 40.0%
TGTAGTAAGTTGTGCTTTGG+AGG + Chr4:89288259-89288278 None:intergenic 40.0%
TGTCAAAGTTCCTATTACGG+TGG + Chr4:89288589-89288608 None:intergenic 40.0%
TTAGGTAAATGTTACAGCCG+AGG + Chr4:89291900-89291919 None:intergenic 40.0%
TTAGTAGGTATAGGGTAGGT+CGG + Chr4:89291145-89291164 None:intergenic 40.0%
TTCAACACTACCCCTTTCAT+TGG + Chr4:89294283-89294302 None:intergenic 40.0%
TTCAGTTCAAATGGGCACAA+GGG + Chr4:89288151-89288170 None:intergenic 40.0%
TTCGTACTGCTCATGAATTG+GGG - Chr4:89286892-89286911 MsG0480023743.01.T01:intron 40.0%
TTTACAGCAAGCTAAGAGTG+AGG - Chr4:89289383-89289402 MsG0480023743.01.T01:CDS 40.0%
TTTATTGGACCTAACGTGAG+TGG - Chr4:89287301-89287320 MsG0480023743.01.T01:CDS 40.0%
TTTCAGTGCACTTTCTTGAC+CGG - Chr4:89286729-89286748 MsG0480023743.01.T01:intron 40.0%
TTTCTTGACCGGAACCAATA+AGG - Chr4:89286740-89286759 MsG0480023743.01.T01:intron 40.0%
! CTGCAGATGATAATGATCCT+TGG - Chr4:89293690-89293709 MsG0480023743.01.T01:CDS 40.0%
! GAGTTCCTTTTGGATGAAAG+GGG - Chr4:89290913-89290932 MsG0480023743.01.T01:intron 40.0%
! GGAGGTTTTTGTTCTATTGC+AGG - Chr4:89288426-89288445 MsG0480023743.01.T01:intron 40.0%
! GGATACTAGTTCAAAGTACC+TGG + Chr4:89290230-89290249 None:intergenic 40.0%
! TACAGGTATTTGTTGCTGTG+TGG - Chr4:89288912-89288931 MsG0480023743.01.T01:intron 40.0%
! TCTATCGGTTACATAGGTGT+TGG - Chr4:89290883-89290902 MsG0480023743.01.T01:intron 40.0%
! TGACTGCGATTTTTATGCAG+AGG - Chr4:89290767-89290786 MsG0480023743.01.T01:intron 40.0%
! TGCACAGCTTACTGCATTTT+TGG - Chr4:89288114-89288133 MsG0480023743.01.T01:intron 40.0%
! TGCAGTTTGAAGCAAATTGC+AGG - Chr4:89293556-89293575 MsG0480023743.01.T01:intron 40.0%
! TGCATTGATACGGCATTCAA+TGG + Chr4:89291760-89291779 None:intergenic 40.0%
! TGCTTTTATTCCAAAGCACG+AGG - Chr4:89293951-89293970 MsG0480023743.01.T01:intron 40.0%
! TTTTATTCCAAAGCACGAGG+AGG - Chr4:89293954-89293973 MsG0480023743.01.T01:intron 40.0%
! TTTTGCTAACCCACCGTAAT+AGG - Chr4:89288576-89288595 MsG0480023743.01.T01:intron 40.0%
!! GATGGTAATGGATGAGATGA+AGG + Chr4:89291414-89291433 None:intergenic 40.0%
!! GATTTCCACTTGACTTGTGT+AGG + Chr4:89293059-89293078 None:intergenic 40.0%
!! GCTTTTAAGGGATTTAGACC+AGG - Chr4:89291786-89291805 MsG0480023743.01.T01:intron 40.0%
!! TGAGGTGTGCTGATTAGTTT+CGG - Chr4:89291503-89291522 MsG0480023743.01.T01:intron 40.0%
!!! AAGATTTTGGTTGCCAATCG+AGG - Chr4:89286849-89286868 MsG0480023743.01.T01:intron 40.0%
!!! CTGTTTTGTTTTGTTCCCTG+TGG - Chr4:89290545-89290564 MsG0480023743.01.T01:intron 40.0%
!!! TCTTTTGTTTTTGTGGGTGG+GGG - Chr4:89291534-89291553 MsG0480023743.01.T01:CDS 40.0%
!!! TGTGTGTGTGTGTGCTTTTT+TGG - Chr4:89289338-89289357 MsG0480023743.01.T01:CDS 40.0%
AAACAGTGACACAGAGACAC+TGG + Chr4:89287067-89287086 None:intergenic 45.0%
AATGTCCTGTCTGTCTACCT+TGG - Chr4:89289673-89289692 MsG0480023743.01.T01:intron 45.0%
ACCATATCCAGGATGCAACA+TGG + Chr4:89287227-89287246 None:intergenic 45.0%
ACCATGTTGCATCCTGGATA+TGG - Chr4:89287223-89287242 MsG0480023743.01.T01:CDS 45.0%
ACCTGGAATTCAATGTGCCT+TGG + Chr4:89289462-89289481 None:intergenic 45.0%
AGAACGTGATTGCAGTATCC+AGG - Chr4:89290209-89290228 MsG0480023743.01.T01:intron 45.0%
AGAACTTTCTCAAGCACACG+CGG + Chr4:89294531-89294550 None:intergenic 45.0%
AGAAGAGAGTCATAGCTTGG+AGG + Chr4:89292195-89292214 None:intergenic 45.0%
ATGCACCTACCTCTATGTCA+AGG + Chr4:89293802-89293821 None:intergenic 45.0%
ATTACAGCATACTTGCCGTC+TGG - Chr4:89292120-89292139 MsG0480023743.01.T01:CDS 45.0%
ATTGTGAGTTACTGTGACGG+TGG + Chr4:89286566-89286585 None:intergenic 45.0%
CAATGTACCATGTTGCATCC+TGG - Chr4:89287217-89287236 MsG0480023743.01.T01:CDS 45.0%
CACTGAAGAAGCTATCAGAC+TGG - Chr4:89288034-89288053 MsG0480023743.01.T01:intron 45.0%
CAGGAGGATATTGTACTCAG+AGG - Chr4:89291729-89291748 MsG0480023743.01.T01:intron 45.0%
CAGGATGCAACATGGTACAT+TGG + Chr4:89287219-89287238 None:intergenic 45.0%
CAGTCTGATAGCTTCTTCAG+TGG + Chr4:89288036-89288055 None:intergenic 45.0%
CATTACATGGCCCATTCAAC+TGG + Chr4:89288763-89288782 None:intergenic 45.0%
CATTCTAACACCAGCTTCCT+CGG - Chr4:89291880-89291899 MsG0480023743.01.T01:intron 45.0%
CCAAGAAGAGAGTCATAGCT+TGG + Chr4:89292198-89292217 None:intergenic 45.0%
CCAAGCTATGACTCTCTTCT+TGG - Chr4:89292195-89292214 MsG0480023743.01.T01:intron 45.0%
CCAATAAGGTGAAGTTTCCG+AGG - Chr4:89286754-89286773 MsG0480023743.01.T01:intron 45.0%
CCTCGGAAACTTCACCTTAT+TGG + Chr4:89286757-89286776 None:intergenic 45.0%
CCTGGAATTCAATGTGCCTT+GGG + Chr4:89289461-89289480 None:intergenic 45.0%
CCTTTCAGCCTGACAGTATT+CGG - Chr4:89287812-89287831 MsG0480023743.01.T01:intron 45.0%
CTAAAATCCCGTTACCGATG+TGG - Chr4:89292488-89292507 MsG0480023743.01.T01:intron 45.0%
CTTTCAGCCTGACAGTATTC+GGG - Chr4:89287813-89287832 MsG0480023743.01.T01:intron 45.0%
GATGCAACATGGTACATTGG+CGG + Chr4:89287216-89287235 None:intergenic 45.0%
GATGTGGATACCTCATTGGT+GGG - Chr4:89292504-89292523 MsG0480023743.01.T01:intron 45.0%
GCAAATGTTCCTACTGTTCC+AGG - Chr4:89287877-89287896 MsG0480023743.01.T01:intron 45.0%
GCTATGTGCAAGTATGGGTT+TGG - Chr4:89291325-89291344 MsG0480023743.01.T01:intron 45.0%
GCTGACACGGCTTGAATTAA+TGG + Chr4:89287037-89287056 None:intergenic 45.0%
GCTGCTGCATTTGGAAATGA+TGG - Chr4:89289408-89289427 MsG0480023743.01.T01:CDS 45.0%
GGACAACTAAGAACGAACAG+AGG + Chr4:89289789-89289808 None:intergenic 45.0%
GGCTACAGTCAAACATTACC+TGG + Chr4:89289479-89289498 None:intergenic 45.0%
GGCTGAAATTCATGTAGCTG+TGG - Chr4:89294239-89294258 MsG0480023743.01.T01:CDS 45.0%
GGGATTAATCCTTGAGTCAG+TGG - Chr4:89288652-89288671 MsG0480023743.01.T01:intron 45.0%
GTACGCGAACTCAAGAAATG+AGG + Chr4:89293277-89293296 None:intergenic 45.0%
GTTGGAATGGGAATGGGAAT+GGG + Chr4:89286339-89286358 None:intergenic 45.0%
TACCGATGTGGATACCTCAT+TGG - Chr4:89292500-89292519 MsG0480023743.01.T01:intron 45.0%
TACTGTCAGGCTGAAAGGTT+TGG + Chr4:89287810-89287829 None:intergenic 45.0%
TAGTAGGTATAGGGTAGGTC+GGG + Chr4:89291144-89291163 None:intergenic 45.0%
TCCATCAATTTCCTGGCTTC+TGG + Chr4:89293456-89293475 None:intergenic 45.0%
TGGCTATCCATCCTGACAAA+TGG + Chr4:89292150-89292169 None:intergenic 45.0%
TGGTTTCCCTGTGATGATCA+AGG - Chr4:89288067-89288086 MsG0480023743.01.T01:intron 45.0%
TGTTGGAATGGGAATGGGAA+TGG + Chr4:89286340-89286359 None:intergenic 45.0%
TTGATTTACTTGGGGCCAAC+AGG - Chr4:89289146-89289165 MsG0480023743.01.T01:intron 45.0%
TTGGAATGGGAATGGGAATG+GGG + Chr4:89286338-89286357 None:intergenic 45.0%
! AGTACGTACGATTGGCTACT+GGG + Chr4:89287005-89287024 None:intergenic 45.0%
! CAAGGTTGAGTAGTTTGCCT+CGG + Chr4:89286774-89286793 None:intergenic 45.0%
! CACCAATGAGGTATCCACAT+CGG + Chr4:89292505-89292524 None:intergenic 45.0%
! CCTGACAGTATTCGGGTTAT+GGG - Chr4:89287820-89287839 MsG0480023743.01.T01:intron 45.0%
! TAGTACGTACGATTGGCTAC+TGG + Chr4:89287006-89287025 None:intergenic 45.0%
! TGAGGTATCCACATCGGTAA+CGG + Chr4:89292499-89292518 None:intergenic 45.0%
! TGCATTGATGGCTTACTGAC+TGG + Chr4:89287517-89287536 None:intergenic 45.0%
! TGGAACGGTTGAGTTCCTTT+TGG - Chr4:89290903-89290922 MsG0480023743.01.T01:intron 45.0%
!! ATTGGTGTCGATGGAAACGA+GGG + Chr4:89286279-89286298 None:intergenic 45.0%
!! CGGTTACATAGGTGTTGGAA+CGG - Chr4:89290888-89290907 MsG0480023743.01.T01:intron 45.0%
!! CTACGCGAGTTTTGTCTATG+TGG + Chr4:89292592-89292611 None:intergenic 45.0%
!! TATTGGTGTCGATGGAAACG+AGG + Chr4:89286280-89286299 None:intergenic 45.0%
!! TCAATTAATTAATTAATTAA+TGG + Chr4:89286630-89286649 None:intergenic 5.0%
!!! TTATTTTTTTATTTTTATCA+GGG - Chr4:89288675-89288694 MsG0480023743.01.T01:intron 5.0%
AACAGCAATCTCGCCTCGAT+TGG + Chr4:89286865-89286884 None:intergenic 50.0%
AAGGGTTTATTTGCGGCGAG+AGG - Chr4:89286675-89286694 MsG0480023743.01.T01:intron 50.0%
AATGGGAGATGCAGCAGTTC+AGG - Chr4:89290852-89290871 MsG0480023743.01.T01:intron 50.0%
AATGTTACAGCCGAGGAAGC+TGG + Chr4:89291893-89291912 None:intergenic 50.0%
AGCTTCCAAGGTAGACAGAC+AGG + Chr4:89289681-89289700 None:intergenic 50.0%
ATCAGACTGGCACACGAGAT+TGG - Chr4:89288047-89288066 MsG0480023743.01.T01:intron 50.0%
ATTGACCCCAGAGTTACGGA+AGG - Chr4:89290828-89290847 MsG0480023743.01.T01:intron 50.0%
ATTTCCACAGCAGCACCAAC+AGG + Chr4:89294055-89294074 None:intergenic 50.0%
CACGCGACCATTAAAGCTCA+CGG + Chr4:89290093-89290112 None:intergenic 50.0%
CAGGTAATTGGTATGGGGCT+GGG - Chr4:89291256-89291275 MsG0480023743.01.T01:intron 50.0%
CATTGCCTTCCGTAACTCTG+GGG + Chr4:89290836-89290855 None:intergenic 50.0%
CCACGGCTTAGGCCAATTAT+GGG - Chr4:89288632-89288651 MsG0480023743.01.T01:intron 50.0%
CCAGAGTTACGGAAGGCAAT+GGG - Chr4:89290835-89290854 MsG0480023743.01.T01:intron 50.0%
CCATTGCCTTCCGTAACTCT+GGG + Chr4:89290837-89290856 None:intergenic 50.0%
CCCAAGGCACATTGAATTCC+AGG - Chr4:89289458-89289477 MsG0480023743.01.T01:intron 50.0%
CCCATAACCCGAATACTGTC+AGG + Chr4:89287823-89287842 None:intergenic 50.0%
CCGAATACTGTCAGGCTGAA+AGG + Chr4:89287815-89287834 None:intergenic 50.0%
CCTACTGTTCCAGGAAGTGA+GGG - Chr4:89287886-89287905 MsG0480023743.01.T01:intron 50.0%
CCTCTTTGTGGTTGGGCTTT+GGG - Chr4:89292653-89292672 MsG0480023743.01.T01:intron 50.0%
CGATGTGGATACCTCATTGG+TGG - Chr4:89292503-89292522 MsG0480023743.01.T01:intron 50.0%
CTACTGTTCCAGGAAGTGAG+GGG - Chr4:89287887-89287906 MsG0480023743.01.T01:intron 50.0%
CTAGTCCTTCCACTCACGTT+AGG + Chr4:89287313-89287332 None:intergenic 50.0%
CTGACAAATGGACCACCAGA+CGG + Chr4:89292138-89292157 None:intergenic 50.0%
CTGGGGATCACATGAATCCT+CGG - Chr4:89289534-89289553 MsG0480023743.01.T01:intron 50.0%
GCCAGAAGCCAGGAAATTGA+TGG - Chr4:89293452-89293471 MsG0480023743.01.T01:intron 50.0%
GGAGATGAACACTCGTATCC+AGG - Chr4:89290951-89290970 MsG0480023743.01.T01:intron 50.0%
GGTGAGAGATTTGCATGCTG+CGG + Chr4:89286536-89286555 None:intergenic 50.0%
GTAGCAGCAGCCAGAACATT+TGG + Chr4:89287190-89287209 None:intergenic 50.0%
GTTGCCCTACACAAGTCAAG+TGG - Chr4:89293051-89293070 MsG0480023743.01.T01:intron 50.0%
TAAGCCGTGGGGATACCTTT+GGG + Chr4:89288622-89288641 None:intergenic 50.0%
TACATCAAGATACCTGGCCC+TGG + Chr4:89291807-89291826 None:intergenic 50.0%
TCAATTGCATGCCAGAAGCC+AGG - Chr4:89293442-89293461 MsG0480023743.01.T01:intron 50.0%
TCCTACTGTTCCAGGAAGTG+AGG - Chr4:89287885-89287904 MsG0480023743.01.T01:intron 50.0%
TCTCGCCGCAAATAAACCCT+TGG + Chr4:89286676-89286695 None:intergenic 50.0%
TGAGTTACTGTGACGGTGGA+TGG + Chr4:89286562-89286581 None:intergenic 50.0%
TGGAATGGGAATGGGAATGG+GGG + Chr4:89286337-89286356 None:intergenic 50.0%
TGGGGATCACATGAATCCTC+GGG - Chr4:89289535-89289554 MsG0480023743.01.T01:intron 50.0%
TGGTGGTCCATTTGTCAGGA+TGG - Chr4:89292140-89292159 MsG0480023743.01.T01:intron 50.0%
TTGGACCTAACGTGAGTGGA+AGG - Chr4:89287305-89287324 MsG0480023743.01.T01:CDS 50.0%
TTTGTCTATGTGGCTCCGCA+GGG + Chr4:89292582-89292601 None:intergenic 50.0%
! CATAATTGGCCTAAGCCGTG+GGG + Chr4:89288633-89288652 None:intergenic 50.0%
! CCATAATTGGCCTAAGCCGT+GGG + Chr4:89288634-89288653 None:intergenic 50.0%
! CTGCATTGACCCCAGAGTTA+CGG - Chr4:89290824-89290843 MsG0480023743.01.T01:intron 50.0%
! GAGGTATCCACATCGGTAAC+GGG + Chr4:89292498-89292517 None:intergenic 50.0%
! GATGGCTTACTGACTGGAAG+TGG + Chr4:89287511-89287530 None:intergenic 50.0%
! GCCGCATCTATCGGTTACAT+AGG - Chr4:89290877-89290896 MsG0480023743.01.T01:intron 50.0%
! GCCTGACAGTATTCGGGTTA+TGG - Chr4:89287819-89287838 MsG0480023743.01.T01:intron 50.0%
! TTTTGTCTATGTGGCTCCGC+AGG + Chr4:89292583-89292602 None:intergenic 50.0%
!! GTTTTTGTGGGTGGGGGTAT+TGG - Chr4:89291540-89291559 MsG0480023743.01.T01:CDS 50.0%
!! TGGGGGTATTGGTTGAGATC+AGG - Chr4:89291551-89291570 MsG0480023743.01.T01:CDS 50.0%
AAGGGATTTAGACCAGGGCC+AGG - Chr4:89291792-89291811 MsG0480023743.01.T01:intron 55.0%
AAGGTGGTGACAGAACCAGC+TGG - Chr4:89294426-89294445 MsG0480023743.01.T01:intron 55.0%
ACAGCATACTTGCCGTCTGG+TGG - Chr4:89292123-89292142 MsG0480023743.01.T01:CDS 55.0%
AGTGAGGCAGCTGCTGCATT+TGG - Chr4:89289399-89289418 MsG0480023743.01.T01:CDS 55.0%
CAACATGGTACATTGGCGGC+TGG + Chr4:89287212-89287231 None:intergenic 55.0%
CACTGGATACGACGCTGACA+CGG + Chr4:89287050-89287069 None:intergenic 55.0%
CCCAAAGCCCAACCACAAAG+AGG + Chr4:89292656-89292675 None:intergenic 55.0%
CCCACGGCTTAGGCCAATTA+TGG - Chr4:89288631-89288650 MsG0480023743.01.T01:intron 55.0%
CCCAGAGTTACGGAAGGCAA+TGG - Chr4:89290834-89290853 MsG0480023743.01.T01:intron 55.0%
CCCATTGCCTTCCGTAACTC+TGG + Chr4:89290838-89290857 None:intergenic 55.0%
CCCTCACTTCCTGGAACAGT+AGG + Chr4:89287889-89287908 None:intergenic 55.0%
CGAGGATTCATGTGATCCCC+AGG + Chr4:89289536-89289555 None:intergenic 55.0%
CGCACAGCCTCTTTGTGGTT+GGG - Chr4:89292646-89292665 MsG0480023743.01.T01:intron 55.0%
CGCGCTTGGCGTTGTTTACA+AGG + Chr4:89286792-89286811 None:intergenic 55.0%
CGTCTGGTGGTCCATTTGTC+AGG - Chr4:89292136-89292155 MsG0480023743.01.T01:CDS 55.0%
CTAAGCCGTGGGGATACCTT+TGG + Chr4:89288623-89288642 None:intergenic 55.0%
GCAGGTAATTGGTATGGGGC+TGG - Chr4:89291255-89291274 MsG0480023743.01.T01:intron 55.0%
GCCTCTTTGTGGTTGGGCTT+TGG - Chr4:89292652-89292671 MsG0480023743.01.T01:intron 55.0%
GGATACCTTTGGGCACCTAC+TGG + Chr4:89288612-89288631 None:intergenic 55.0%
GGGATCACATGAATCCTCGG+GGG - Chr4:89289537-89289556 MsG0480023743.01.T01:intron 55.0%
GGGGATCACATGAATCCTCG+GGG - Chr4:89289536-89289555 MsG0480023743.01.T01:intron 55.0%
GGTTTATTTGCGGCGAGAGG+AGG - Chr4:89286678-89286697 MsG0480023743.01.T01:intron 55.0%
GTCGATGGAAACGAGGGTGA+GGG + Chr4:89286273-89286292 None:intergenic 55.0%
GTTCAGGCTGCCGCATCTAT+CGG - Chr4:89290868-89290887 MsG0480023743.01.T01:intron 55.0%
TACTGTGACGGTGGATGGTG+AGG + Chr4:89286557-89286576 None:intergenic 55.0%
TCCAAAGCACGAGGAGGAGT+TGG - Chr4:89293960-89293979 MsG0480023743.01.T01:intron 55.0%
TGACACCAGTAGGTGCCCAA+AGG - Chr4:89288604-89288623 MsG0480023743.01.T01:intron 55.0%
TGCAAAAGCCCCTCACTTCC+TGG + Chr4:89287898-89287917 None:intergenic 55.0%
TGGGGCCAACAGGTAGAAGA+AGG - Chr4:89289156-89289175 MsG0480023743.01.T01:intron 55.0%
TGTCGATGGAAACGAGGGTG+AGG + Chr4:89286274-89286293 None:intergenic 55.0%
TTATTTGCGGCGAGAGGAGG+AGG - Chr4:89286681-89286700 MsG0480023743.01.T01:intron 55.0%
TTGAGGATTCCCTGACCCTG+CGG - Chr4:89292564-89292583 MsG0480023743.01.T01:intron 55.0%
TTGTGCGCACAGCCTCTTTG+TGG - Chr4:89292641-89292660 MsG0480023743.01.T01:intron 55.0%
! AGGAAGTGAGGGGCTTTTGC+AGG - Chr4:89287897-89287916 MsG0480023743.01.T01:intron 55.0%
! CCCATAATTGGCCTAAGCCG+TGG + Chr4:89288635-89288654 None:intergenic 55.0%
! TCTGGGGTCAATGCAGGAGA+CGG + Chr4:89290820-89290839 None:intergenic 55.0%
!! ATCTCCTGTTGGTGCTGCTG+TGG - Chr4:89294048-89294067 MsG0480023743.01.T01:CDS 55.0%
!! CAAAGGTATCCCCACGGCTT+AGG - Chr4:89288621-89288640 MsG0480023743.01.T01:intron 55.0%
!! CGTAACTCTGGGGTCAATGC+AGG + Chr4:89290826-89290845 None:intergenic 55.0%
CAACGCCAAGCGCGTCATTG+CGG - Chr4:89286798-89286817 MsG0480023743.01.T01:intron 60.0%
GCAGCCCCCACAACAGAAGA+TGG - Chr4:89294392-89294411 MsG0480023743.01.T01:intron 60.0%
GCCAACTCCTCCTCGTGCTT+TGG + Chr4:89293964-89293983 None:intergenic 60.0%
GCGCACAGCCTCTTTGTGGT+TGG - Chr4:89292645-89292664 MsG0480023743.01.T01:intron 60.0%
GGTGTTTCTCAGGCAACCGC+AGG - Chr4:89288833-89288852 MsG0480023743.01.T01:CDS 60.0%
GTTTCTCAGGCAACCGCAGG+TGG - Chr4:89288836-89288855 MsG0480023743.01.T01:CDS 60.0%
TATGTGGCTCCGCAGGGTCA+GGG + Chr4:89292576-89292595 None:intergenic 60.0%
!! GGTGCCCAAAGGTATCCCCA+CGG - Chr4:89288615-89288634 MsG0480023743.01.T01:intron 60.0%
CATCAGGCAGTCGAGCCAGC+TGG + Chr4:89294444-89294463 None:intergenic 65.0%
CTATGTGGCTCCGCAGGGTC+AGG + Chr4:89292577-89292596 None:intergenic 65.0%
GCACGAGGAGGAGTTGGCTG+TGG - Chr4:89293966-89293985 MsG0480023743.01.T01:intron 65.0%
TCTCAGGCAACCGCAGGTGG+TGG - Chr4:89288839-89288858 MsG0480023743.01.T01:CDS 65.0%
TTTGCGGCGAGAGGAGGAGG+AGG - Chr4:89286684-89286703 MsG0480023743.01.T01:intron 65.0%
! GAGCACCGCAATGACGCGCT+TGG + Chr4:89286806-89286825 None:intergenic 65.0%
!! CAGCTGGCTCGACTGCCTGA+TGG - Chr4:89294442-89294461 MsG0480023743.01.T01:CDS 65.0%
GCCACGTCCTCCACCACCTG+CGG + Chr4:89288852-89288871 None:intergenic 70.0%
! CAGGCAACCGCAGGTGGTGG+AGG - Chr4:89288842-89288861 MsG0480023743.01.T01:CDS 70.0%
!! ACCGCAGGTGGTGGAGGACG+TGG - Chr4:89288848-89288867 MsG0480023743.01.T01:CDS 70.0%
GCGGCGAGAGGAGGAGGAGG+AGG - Chr4:89286687-89286706 MsG0480023743.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 89286202 89294801 89286202 ID=MsG0480023743.01;Name=MsG0480023743.01
Chr4 mRNA 89286202 89294801 89286202 ID=MsG0480023743.01.T01;Parent=MsG0480023743.01;Name=MsG0480023743.01.T01;_AED=0.45;_eAED=0.49;_QI=213|0.87|0.88|1|0.81|0.76|17|340|607
Chr4 exon 89294430 89294494 89294430 ID=MsG0480023743.01.T01:exon:13072;Parent=MsG0480023743.01.T01
Chr4 exon 89294597 89294801 89294597 ID=MsG0480023743.01.T01:exon:13071;Parent=MsG0480023743.01.T01
Chr4 five_prime_UTR 89294597 89294801 89294597 ID=MsG0480023743.01.T01:five_prime_utr;Parent=MsG0480023743.01.T01
Chr4 five_prime_UTR 89294487 89294494 89294487 ID=MsG0480023743.01.T01:five_prime_utr;Parent=MsG0480023743.01.T01
Chr4 CDS 89294430 89294486 89294430 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89293988 89294325 89293988 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89293688 89293829 89293688 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89293085 89293183 89293085 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89292915 89292971 89292915 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89292087 89292158 89292087 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89291524 89291613 89291524 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89290773 89290832 89290773 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89290031 89290216 89290031 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89289338 89289430 89289338 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89289190 89289271 89289190 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89288782 89288888 89288782 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89287622 89287697 89287622 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89287192 89287340 89287192 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89286929 89287078 89286929 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 CDS 89286542 89286607 89286542 ID=MsG0480023743.01.T01:cds;Parent=MsG0480023743.01.T01
Chr4 three_prime_UTR 89286202 89286541 89286202 ID=MsG0480023743.01.T01:three_prime_utr;Parent=MsG0480023743.01.T01
Chr4 mRNA 89286202 89294524 89286202 ID=MsG0480023743.01.T02;Parent=MsG0480023743.01;Name=MsG0480023743.01.T02;_AED=0.45;_eAED=0.49;_QI=38|0.86|0.87|1|0.86|0.81|16|340|607
Chr4 exon 89294430 89294524 89294430 ID=MsG0480023743.01.T02:exon:13088;Parent=MsG0480023743.01.T02
Chr4 five_prime_UTR 89294487 89294524 89294487 ID=MsG0480023743.01.T02:five_prime_utr;Parent=MsG0480023743.01.T02
Chr4 CDS 89294430 89294486 89294430 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89293988 89294325 89293988 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89293688 89293829 89293688 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89293085 89293183 89293085 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89292915 89292971 89292915 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89292087 89292158 89292087 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89291524 89291613 89291524 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89290773 89290832 89290773 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89290031 89290216 89290031 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89289338 89289430 89289338 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89289190 89289271 89289190 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89288782 89288888 89288782 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89287622 89287697 89287622 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89287192 89287340 89287192 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89286929 89287078 89286929 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 CDS 89286542 89286607 89286542 ID=MsG0480023743.01.T02:cds;Parent=MsG0480023743.01.T02
Chr4 three_prime_UTR 89286202 89286541 89286202 ID=MsG0480023743.01.T02:three_prime_utr;Parent=MsG0480023743.01.T02
Gene Sequence

>MsG0480023743.01.T02

ATGGAGGCAACAATGTCCGCAGCATGCAAATCTCTCACCTCACCATCCACCGTCACAGGTTTATTTGCGGCGAGAGGAGGAGGAGGAGGATTCAACAAGAATTCACATTTTCAGTGCACTTTCTTGACCGGAACCAATAAGGTGAAGTTTCCGAGGCAAACTACTCAACCTTGTAAACAACGCCAAGCGCGTCATTGCGGTGCTCTTCGTGCTACTTGTCGTCTTGACAAGATTTTGGTTGCCAATCGAGGCGAGATTGCTGTTCGTGTTATTCGTACTGCTCATGAATTGGGGATTCCTTGTGTTGCTGTTTATTCCACCATTGATAAAGATGCTCTTCATGTTAAATTGGCTGATGAATCTGTTTGTATTGGTGAAGCTCCCAGTAGCCAATCGTATTTAGTGATTCCAAATGTTCTGGCTGCTGCTACCAGCCGCCAATGTACCATGTTGCATCCTGGATATGGTTTTCTTGCTGAGAATGCTGTGTTTGTTGAAATGTGTAGAGATCATGGAGTCAATTTTATTGGACCTAACCCTGACAGTATTCGGGTTATGGGTGACAAAGCAACTGCAAGAGAAACAATGAAGAAAGCAAATGTTCCTACTGTTCCAGGAAGTGAGGGGCTTTTGCAGACCACTGAAGAAGCTATCAGACTGGCACACGAGATTGGTTTCCCTGTGATGATCAAGGCAACCGCAGGTGGTGGAGGACGTGGCATGCGTCTTGCTAAAGAACCTAAAGAGTTTGTGAAATTATTACAGCAAGCTAAGAGTGAGGCAGCTGCTGCATTTGGAAATGATGGGGTTTATTTGGAGAAGTACATTCAAAACCCAAGGCACATTGAATTCCAGGTTCTTGCAGATAAATATGGTAATGTTGTTCACTTTGGAGAACGTGATTGCAGTATCCAGAGGCGTAATCAGAAACTGCTCGAAGAAGCACCGTCTCCTGCATTGACCCCAGAGTTACGGAAGGCAATGGGAGATGCAGCAGTTCAGGCTGCCGCATCTATCGGTTACATAGGTGTTGGAACGGTTGAGTTCCTTTTGGATGAAAGGGGTTCTTTTTACTTCATGGAGATGAACACTCGTATCCAGGTTGAACATCCCGTGACAGAAATGATTTCCTCAGTTGATTTGATAGAAGAGCAAATTCGTGTAGCTATGGGAGAAAAGCTTCGATACAAACAGGAGGATATTGTACTCAGAGGACATTCCATTGAATGCCGTATCAATGCAGAAGATGCTTTTAAGGGATTTAGACCAGGGCCAGGTAGAATTACAGCATACTTGCCGTCTGGTGGTCCATTTGTCAGGATGGATAGCCATATTTATCCCGATTATGTTGTTCCTCCAAGCTATGACTCTCTTCTTGGAAAGCTGATTGTATGGGCTCCGACTAGAGAAAAAGCAATTGAACGCATGAAAAGGGCACTCGATGACACTATTATCACAGTTTTAAATCCTTCTGTTTTGAAAAGAACTGCAGATGATAATGATCCTTGGTTTAAACTCTTAGCTTTCTATGATATCGCTAACACTTTCAATTTTGTTACAGGAGTTCCTACAACAATTGATTATCATAAACTTATCCTTGACATAGAGGATTTCAAAAATGGCAAGGTTGATACTGCTTTTATTCCAAAGCACGAGGAGGAGTTGGCTGTGGTAAGAACTAATATAGTGCTGAATATATTTATGTACCCTAGCGATGGCTTTCAAAATTATATCTCCTGTTGGTGCTGCTGTGGAAATCCCCCACAACAGAAGATGGTATTAGTTAACAAGGTGGTGACAGAACCAGCTGGCTCGACTGCCTGA

>MsG0480023743.01.T01

ATGGAGGCAACAATGTCCGCAGCATGCAAATCTCTCACCTCACCATCCACCGTCACAGGTTTATTTGCGGCGAGAGGAGGAGGAGGAGGATTCAACAAGAATTCACATTTTCAGTGCACTTTCTTGACCGGAACCAATAAGGTGAAGTTTCCGAGGCAAACTACTCAACCTTGTAAACAACGCCAAGCGCGTCATTGCGGTGCTCTTCGTGCTACTTGTCGTCTTGACAAGATTTTGGTTGCCAATCGAGGCGAGATTGCTGTTCGTGTTATTCGTACTGCTCATGAATTGGGGATTCCTTGTGTTGCTGTTTATTCCACCATTGATAAAGATGCTCTTCATGTTAAATTGGCTGATGAATCTGTTTGTATTGGTGAAGCTCCCAGTAGCCAATCGTATTTAGTGATTCCAAATGTTCTGGCTGCTGCTACCAGCCGCCAATGTACCATGTTGCATCCTGGATATGGTTTTCTTGCTGAGAATGCTGTGTTTGTTGAAATGTGTAGAGATCATGGAGTCAATTTTATTGGACCTAACCCTGACAGTATTCGGGTTATGGGTGACAAAGCAACTGCAAGAGAAACAATGAAGAAAGCAAATGTTCCTACTGTTCCAGGAAGTGAGGGGCTTTTGCAGACCACTGAAGAAGCTATCAGACTGGCACACGAGATTGGTTTCCCTGTGATGATCAAGGCAACCGCAGGTGGTGGAGGACGTGGCATGCGTCTTGCTAAAGAACCTAAAGAGTTTGTGAAATTATTACAGCAAGCTAAGAGTGAGGCAGCTGCTGCATTTGGAAATGATGGGGTTTATTTGGAGAAGTACATTCAAAACCCAAGGCACATTGAATTCCAGGTTCTTGCAGATAAATATGGTAATGTTGTTCACTTTGGAGAACGTGATTGCAGTATCCAGAGGCGTAATCAGAAACTGCTCGAAGAAGCACCGTCTCCTGCATTGACCCCAGAGTTACGGAAGGCAATGGGAGATGCAGCAGTTCAGGCTGCCGCATCTATCGGTTACATAGGTGTTGGAACGGTTGAGTTCCTTTTGGATGAAAGGGGTTCTTTTTACTTCATGGAGATGAACACTCGTATCCAGGTTGAACATCCCGTGACAGAAATGATTTCCTCAGTTGATTTGATAGAAGAGCAAATTCGTGTAGCTATGGGAGAAAAGCTTCGATACAAACAGGAGGATATTGTACTCAGAGGACATTCCATTGAATGCCGTATCAATGCAGAAGATGCTTTTAAGGGATTTAGACCAGGGCCAGGTAGAATTACAGCATACTTGCCGTCTGGTGGTCCATTTGTCAGGATGGATAGCCATATTTATCCCGATTATGTTGTTCCTCCAAGCTATGACTCTCTTCTTGGAAAGCTGATTGTATGGGCTCCGACTAGAGAAAAAGCAATTGAACGCATGAAAAGGGCACTCGATGACACTATTATCACAGTTTTAAATCCTTCTGTTTTGAAAAGAACTGCAGATGATAATGATCCTTGGTTTAAACTCTTAGCTTTCTATGATATCGCTAACACTTTCAATTTTGTTACAGGAGTTCCTACAACAATTGATTATCATAAACTTATCCTTGACATAGAGGATTTCAAAAATGGCAAGGTTGATACTGCTTTTATTCCAAAGCACGAGGAGGAGTTGGCTGTGGTAAGAACTAATATAGTGCTGAATATATTTATGTACCCTAGCGATGGCTTTCAAAATTATATCTCCTGTTGGTGCTGCTGTGGAAATCCCCCACAACAGAAGATGGTATTAGTTAACAAGGTGGTGACAGAACCAGCTGGCTCGACTGCCTGA
Protein sequence

>MsG0480023743.01.T02

MEATMSAACKSLTSPSTVTGLFAARGGGGGFNKNSHFQCTFLTGTNKVKFPRQTTQPCKQRQARHCGALRATCRLDKILVANRGEIAVRVIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLVIPNVLAAATSRQCTMLHPGYGFLAENAVFVEMCRDHGVNFIGPNPDSIRVMGDKATARETMKKANVPTVPGSEGLLQTTEEAIRLAHEIGFPVMIKATAGGGGRGMRLAKEPKEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVQAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRITAYLPSGGPFVRMDSHIYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDTIITVLNPSVLKRTADDNDPWFKLLAFYDIANTFNFVTGVPTTIDYHKLILDIEDFKNGKVDTAFIPKHEEELAVVRTNIVLNIFMYPSDGFQNYISCWCCCGNPPQQKMVLVNKVVTEPAGSTA*

>MsG0480023743.01.T01

MEATMSAACKSLTSPSTVTGLFAARGGGGGFNKNSHFQCTFLTGTNKVKFPRQTTQPCKQRQARHCGALRATCRLDKILVANRGEIAVRVIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQSYLVIPNVLAAATSRQCTMLHPGYGFLAENAVFVEMCRDHGVNFIGPNPDSIRVMGDKATARETMKKANVPTVPGSEGLLQTTEEAIRLAHEIGFPVMIKATAGGGGRGMRLAKEPKEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVQAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRITAYLPSGGPFVRMDSHIYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDTIITVLNPSVLKRTADDNDPWFKLLAFYDIANTFNFVTGVPTTIDYHKLILDIEDFKNGKVDTAFIPKHEEELAVVRTNIVLNIFMYPSDGFQNYISCWCCCGNPPQQKMVLVNKVVTEPAGSTA*