AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023044.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023044.01.T01 MTR_8g085630 78.906 384 12 3 8 322 87 470 0.0 573
MsG0480023044.01.T01 MTR_8g085630 84.746 236 7 2 322 528 53 288 6.29e-125 375
MsG0480023044.01.T01 MTR_5g064750 50.785 382 119 3 8 320 72 453 5.14e-121 364
MsG0480023044.01.T01 MTR_5g064750 59.746 236 66 2 322 528 38 273 7.58e-84 268
MsG0480023044.01.T01 MTR_5g005160 40.209 383 157 5 8 321 58 437 2.22e-84 270
MsG0480023044.01.T01 MTR_5g005160 46.218 238 100 3 319 528 20 257 1.84e-49 177
MsG0480023044.01.T01 MTR_0031s0060 38.655 357 171 5 8 319 187 540 8.64e-80 263
MsG0480023044.01.T01 MTR_0031s0060 44.958 238 82 2 317 528 148 362 1.54e-54 195
MsG0480023044.01.T01 MTR_1g112950 38.320 381 163 5 8 319 73 450 1.25e-79 257
MsG0480023044.01.T01 MTR_1g112950 48.945 237 94 2 319 528 36 272 1.10e-63 215
MsG0480023044.01.T01 MTR_5g026780 36.483 381 171 5 8 319 77 455 4.25e-76 248
MsG0480023044.01.T01 MTR_5g026780 47.479 238 97 2 319 528 40 277 3.12e-63 214
MsG0480023044.01.T01 MTR_5g026780 36.483 381 171 5 8 319 93 471 5.60e-76 248
MsG0480023044.01.T01 MTR_5g026780 47.479 238 97 2 319 528 56 293 2.72e-63 215
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023044.01.T01 AT3G13620 50.000 384 121 4 8 322 77 458 4.41e-116 352
MsG0480023044.01.T01 AT3G13620 58.120 234 71 2 322 528 43 276 7.28e-79 256
MsG0480023044.01.T01 AT3G19553 41.220 410 155 8 8 334 70 476 4.80e-90 285
MsG0480023044.01.T01 AT3G19553 51.754 228 82 3 319 518 32 259 6.42e-54 189
MsG0480023044.01.T01 AT1G31830 36.294 394 179 5 8 332 80 470 3.46e-82 264
MsG0480023044.01.T01 AT1G31830 51.899 237 87 2 319 528 43 279 4.83e-70 233
MsG0480023044.01.T01 AT1G31830 36.294 394 179 5 8 332 96 486 3.79e-82 265
MsG0480023044.01.T01 AT1G31830 51.899 237 87 2 319 528 59 295 5.23e-70 233
MsG0480023044.01.T01 AT1G31820 38.542 384 164 6 5 319 80 460 8.16e-82 263
MsG0480023044.01.T01 AT1G31820 51.464 239 89 2 319 530 46 284 1.89e-67 226
MsG0480023044.01.T01 AT5G05630 37.113 388 174 4 8 326 100 486 1.47e-80 260
MsG0480023044.01.T01 AT5G05630 51.883 239 86 2 319 528 63 301 1.04e-68 229

Find 102 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATGGTGGGTTTGTTATT+TGG 0.106922 4:+80131062 MsG0480023044.01.T01:CDS
GAAATGGTGGGTTTGTTATT+TGG 0.119761 4:+80134369 MsG0480023044.01.T01:CDS
AGTGCTTTCTTAACATTCTT+AGG 0.147342 4:+80132065 MsG0480023044.01.T01:CDS
CTCATCTACTTTGAGGTATC+TGG 0.167645 4:+80134212 MsG0480023044.01.T01:intron
TCTGGAATACTCCAAATAAA+TGG 0.207381 4:-80134308 None:intergenic
CTGGGAATTGGTTGAAATAT+TGG 0.212399 4:+80131636 MsG0480023044.01.T01:CDS
TGCTGGATTGTTAACTTGTT+TGG 0.222119 4:+80134840 MsG0480023044.01.T01:CDS
AAGGTTCCACTTGGATTCTT+TGG 0.223454 4:+80131963 MsG0480023044.01.T01:CDS
TGCTGGATTGTTAACTTGTT+TGG 0.231778 4:+80131517 MsG0480023044.01.T01:CDS
ACTAGCCACATATACAATTT+TGG 0.238044 4:-80132045 None:intergenic
AAATGGTGGGTTTGTTATTT+GGG 0.257640 4:+80131063 MsG0480023044.01.T01:CDS
AAATGGTGGGTTTGTTATTT+GGG 0.257640 4:+80134370 MsG0480023044.01.T01:CDS
CCAGCAAATAACAAAGCTTT+TGG 0.261342 4:-80131500 None:intergenic
TTGAAATATTGGATGGAAAT+TGG 0.269249 4:+80131647 MsG0480023044.01.T01:CDS
GGTTATACTGCAGTTGGTTT+AGG 0.285281 4:+80134602 MsG0480023044.01.T01:CDS
CCAAAAGCTTTGTTATTTGC+TGG 0.287356 4:+80131500 MsG0480023044.01.T01:CDS
ATTTGGGCTAATGAAGCTTT+TGG 0.289227 4:+80131079 MsG0480023044.01.T01:CDS
ATTTGGGCTAATGAAGCTTT+TGG 0.289227 4:+80134386 MsG0480023044.01.T01:CDS
TACAATGAAAAGACCTTATA+AGG 0.296408 4:+80131944 MsG0480023044.01.T01:CDS
AATCCAAGTGGAACCTTATA+AGG 0.306194 4:-80131957 None:intergenic
TGCCACTTGATCAAGAAGTT+TGG 0.318408 4:+80131576 MsG0480023044.01.T01:CDS
CTGGTTTGATTGCTGGGAAT+TGG 0.320667 4:+80131624 MsG0480023044.01.T01:CDS
GGGTTATATAATTCCTTTGT+TGG 0.320719 4:+80131538 MsG0480023044.01.T01:CDS
GGGTTATATAATTCCTTTGT+TGG 0.320719 4:+80134861 MsG0480023044.01.T01:CDS
AGATAATCTATACATAGAAT+TGG 0.327996 4:-80134476 None:intergenic
GTATAGTTTAGGTATGCTTT+TGG 0.330507 4:+80131884 MsG0480023044.01.T01:intron
CCTAGTAGATGGTTAAGTTT+AGG 0.331119 4:+80131359 MsG0480023044.01.T01:CDS
GCCACTTGATCAAGAAGTTT+GGG 0.332993 4:+80131577 MsG0480023044.01.T01:CDS
CATGTGGCTGGTTTGATTGC+TGG 0.333123 4:+80131617 MsG0480023044.01.T01:CDS
GCTGGATTGTTAACTTGTTT+GGG 0.336043 4:+80131518 MsG0480023044.01.T01:CDS
GCTGGATTGTTAACTTGTTT+GGG 0.336043 4:+80134841 MsG0480023044.01.T01:CDS
AGATAATCTATACATAGAAT+TGG 0.340004 4:-80131169 None:intergenic
TAAACCAGAATAATTCAAAA+AGG 0.378273 4:-80134570 None:intergenic
GAGGTATCTGGTGGACCTTA+TGG 0.387052 4:+80134224 MsG0480023044.01.T01:intron
TGCCACTTGATCAAGAAGTT+TGG 0.387297 4:+80134899 MsG0480023044.01.T01:CDS
ATTCCTTTGTTGGCTACTAC+TGG 0.396954 4:+80131548 MsG0480023044.01.T01:CDS
ATAACAAACCCACCATTTCC+AGG 0.406978 4:-80134365 None:intergenic
ATGTCTTTGCCTTGTTGTAT+TGG 0.410280 4:+80130629 MsG0480023044.01.T01:CDS
ATTCCTTTGTTGGCTACTAC+CGG 0.417944 4:+80134871 MsG0480023044.01.T01:CDS
GTGCTTTCTTAACATTCTTA+GGG 0.418391 4:+80132066 MsG0480023044.01.T01:CDS
ATGTGGCTGGTTTGATTGCT+GGG 0.424967 4:+80131618 MsG0480023044.01.T01:CDS
TATTCTGGTTTAGCTATAGT+TGG 0.426561 4:+80134581 MsG0480023044.01.T01:CDS
CTGGAATACTCCAAATAAAT+GGG 0.440921 4:-80134307 None:intergenic
TCCTTTGTTGGCTACTACCG+GGG 0.443324 4:+80134873 MsG0480023044.01.T01:CDS
ACATTAACACAAAGGGCAAA+AGG 0.443673 4:-80134634 None:intergenic
ACTGTTGCTTCTTCACCATA+AGG 0.446104 4:-80134239 None:intergenic
TCTGCAGTTAAAAGAGCCTC+TGG 0.446328 4:-80134326 None:intergenic
GCTACAACATTCCCTGGAAA+TGG 0.446788 4:+80134353 MsG0480023044.01.T01:CDS
GCTACAGCATTCGCTGGAAA+TGG 0.448382 4:+80131046 MsG0480023044.01.T01:CDS
CTAAAATTGATCCTAGTAGA+TGG 0.453700 4:+80134672 MsG0480023044.01.T01:CDS
TTCCTTTGTTGGCTACTACC+GGG 0.460814 4:+80134872 MsG0480023044.01.T01:CDS
CTAAAATTGATCCTAGTAGA+TGG 0.462759 4:+80131348 MsG0480023044.01.T01:CDS
GATAATCTATACATAGAATT+GGG 0.465775 4:-80134475 None:intergenic
GATAATCTATACATAGAATT+GGG 0.472908 4:-80131168 None:intergenic
ATCAAAGACATTAACACAAA+GGG 0.476966 4:-80134641 None:intergenic
CCTAAACTTAACCATCTACT+AGG 0.478755 4:-80131359 None:intergenic
ATGGTTAAGTTTAGGACAAG+AGG 0.482198 4:+80131367 MsG0480023044.01.T01:CDS
TGAATCTTTGCAAGTCTAAG+AGG 0.493630 4:+80132108 MsG0480023044.01.T01:CDS
ATCAAGAAGTTTGGGTTGGT+GGG 0.495054 4:+80131585 MsG0480023044.01.T01:CDS
GATCAAGAAGTTTGGTTGGT+GGG 0.497137 4:+80134907 MsG0480023044.01.T01:CDS
GATCAAGAAGTTTGGGTTGG+TGG 0.497496 4:+80131584 MsG0480023044.01.T01:CDS
GGTAAACCTGAAGACAAAAC+AGG 0.502863 4:-80131202 None:intergenic
GGTAAACCTGAAGACAAAAC+AGG 0.502863 4:-80134512 None:intergenic
CATTAACACAAAGGGCAAAA+GGG 0.503892 4:-80134633 None:intergenic
GATAGTGCTAGTACTTTAGC+TGG 0.506350 4:+80134772 MsG0480023044.01.T01:intron
GATAGTGCTAGCACTTTAGC+TGG 0.508343 4:+80131449 MsG0480023044.01.T01:CDS
ATAGTTGGTTATACTGCAGT+TGG 0.509080 4:+80134596 MsG0480023044.01.T01:CDS
GAAGCAACAGTAAGTGCTGC+AGG 0.513783 4:+80134251 MsG0480023044.01.T01:CDS
TGGTTAAGTTTAGGACAAGA+GGG 0.515356 4:+80131368 MsG0480023044.01.T01:CDS
AGACCTTATAAGGTTCCACT+TGG 0.526727 4:+80131954 MsG0480023044.01.T01:CDS
GAATTAGCTACAACATTCCC+TGG 0.531597 4:+80134347 MsG0480023044.01.T01:CDS
TCCTAAACTTACCATCTACT+AGG 0.532007 4:-80134683 None:intergenic
TGCTACCAAAATTGTATATG+TGG 0.535048 4:+80132040 MsG0480023044.01.T01:CDS
ACATAAACCAACAGCACAGA+TGG 0.538480 4:-80132008 None:intergenic
GTGGTTTAACACACCTTCGA+TGG 0.538701 4:+80131784 MsG0480023044.01.T01:CDS
CTTGATCAAGAAGTTTGGGT+TGG 0.540498 4:+80131581 MsG0480023044.01.T01:CDS
TTGCTTCTTTCCTTAAGTTG+AGG 0.541531 4:+80131910 MsG0480023044.01.T01:CDS
GAATTAGCTACAGCATTCGC+TGG 0.544777 4:+80131040 MsG0480023044.01.T01:CDS
ATCTACTTTGAGGTATCTGG+TGG 0.545094 4:+80134215 MsG0480023044.01.T01:intron
ACAGCATTCGCTGGAAATGG+TGG 0.545891 4:+80131049 MsG0480023044.01.T01:CDS
ACCCAAACTTCTTGATCAAG+TGG 0.548962 4:-80131578 None:intergenic
AACCAAACTTCTTGATCAAG+TGG 0.548962 4:-80134901 None:intergenic
ACAACATTCCCTGGAAATGG+TGG 0.555951 4:+80134356 MsG0480023044.01.T01:CDS
ATTTCAACAATAATATCACT+TGG 0.558408 4:+80131815 MsG0480023044.01.T01:CDS
TGATCAAGAAGTTTGGTTGG+TGG 0.574389 4:+80134906 MsG0480023044.01.T01:CDS
TTGATCAAGTGGCATAGCCC+CGG 0.575447 4:-80134890 None:intergenic
TAACAAACCCACCATTTCCA+GGG 0.582040 4:-80134364 None:intergenic
CAGCATTCGCTGGAAATGGT+GGG 0.583256 4:+80131050 MsG0480023044.01.T01:CDS
ATCTTTGCAAGTCTAAGAGG+TGG 0.589872 4:+80132111 MsG0480023044.01.T01:CDS
GAATTGGTTGAAATATTGGA+TGG 0.593097 4:+80131640 MsG0480023044.01.T01:CDS
ACTTGATCAAGAAGTTTGGT+TGG 0.598136 4:+80134903 MsG0480023044.01.T01:CDS
CAACATTCCCTGGAAATGGT+GGG 0.601942 4:+80134357 MsG0480023044.01.T01:CDS
GAAATCAAAATTGCCATCGA+AGG 0.614144 4:-80131797 None:intergenic
ATTAAACCAAAGAATCCAAG+TGG 0.618042 4:-80131969 None:intergenic
ATTTATTTGGAGTATTCCAG+AGG 0.619283 4:+80134310 MsG0480023044.01.T01:CDS
AATCAAAGACATTAACACAA+AGG 0.619734 4:-80134642 None:intergenic
AAGAGGTGGATTGAGTTCCG+TGG 0.659452 4:+80132125 MsG0480023044.01.T01:CDS
GCCCCGGTAGTAGCCAACAA+AGG 0.665760 4:-80134874 None:intergenic
CATCTTATACCAATACAACA+AGG 0.678164 4:-80130638 None:intergenic
GCACCAGTAGTAGCCAACAA+AGG 0.678385 4:-80131551 None:intergenic
TATTTGGTGAAAGATCAAAG+TGG 0.716626 4:+80131765 MsG0480023044.01.T01:CDS
GACAAAATAGACACAATACG+AGG 0.760423 4:-80134533 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTGAAAAATTATTATA+AGG + Chr4:80133428-80133447 MsG0480023044.01.T01:intron 10.0%
!! AATCAAATAATAAATAGTTA+AGG + Chr4:80133012-80133031 MsG0480023044.01.T01:intron 10.0%
!! TTTCAAAAATTATACATTTA+AGG + Chr4:80133581-80133600 MsG0480023044.01.T01:intron 10.0%
!!! TAATACTCATTTTTTTTTAT+TGG - Chr4:80132437-80132456 None:intergenic 10.0%
!!! TTTTTTTCAATACTATTTTT+TGG + Chr4:80131411-80131430 MsG0480023044.01.T01:CDS 10.0%
!! AAATTCATAAAAATTCAACA+TGG + Chr4:80134053-80134072 MsG0480023044.01.T01:intron 15.0%
!! AATTCATAAAAATTCAACAT+GGG + Chr4:80134054-80134073 MsG0480023044.01.T01:intron 15.0%
!! ATTATTATATAGAAGAAGTT+AGG + Chr4:80132179-80132198 MsG0480023044.01.T01:intron 15.0%
!! TATGGTAAAAAAATAATACT+TGG + Chr4:80133340-80133359 MsG0480023044.01.T01:intron 15.0%
!! TTTATGAATGAAAAAAAATG+TGG + Chr4:80133135-80133154 MsG0480023044.01.T01:intron 15.0%
!!! AGTTAAGGTTTTTTTTTTAA+AGG + Chr4:80133027-80133046 MsG0480023044.01.T01:intron 15.0%
!!! AGTTAATTTTTGTATAGTTT+AGG + Chr4:80131873-80131892 MsG0480023044.01.T01:intron 15.0%
!!! ATGTTGAATTTTTATGAATT+TGG - Chr4:80134054-80134073 None:intergenic 15.0%
!!! GTTAAGGTTTTTTTTTTAAA+GGG + Chr4:80133028-80133047 MsG0480023044.01.T01:intron 15.0%
!!! TTATAATTTTCCCATTTATT+TGG + Chr4:80130990-80131009 MsG0480023044.01.T01:intron 15.0%
!! AAAAAAAATGAGTATTAGAG+AGG + Chr4:80132440-80132459 MsG0480023044.01.T01:intron 20.0%
!! AAAAAAATGAGTATTAGAGA+GGG + Chr4:80132441-80132460 MsG0480023044.01.T01:intron 20.0%
!! AAAAAGTTAATCATAGATGT+TGG + Chr4:80133301-80133320 MsG0480023044.01.T01:intron 20.0%
!! AAGACATGTATAATAAATGT+AGG - Chr4:80133859-80133878 None:intergenic 20.0%
!! AATGAGTATGTTACATAAAT+TGG - Chr4:80132261-80132280 None:intergenic 20.0%
!! AGATAATCTATACATAGAAT+TGG - Chr4:80131172-80131191 None:intergenic 20.0%
!! ATTTATGTAACATACTCATT+TGG + Chr4:80132261-80132280 MsG0480023044.01.T01:intron 20.0%
!! ATTTCAACAATAATATCACT+TGG + Chr4:80131815-80131834 MsG0480023044.01.T01:CDS 20.0%
!! CTACTAACTACAATTAATAA+GGG + Chr4:80132808-80132827 MsG0480023044.01.T01:intron 20.0%
!! GAATGAAATTCAATACATAA+GGG - Chr4:80132776-80132795 None:intergenic 20.0%
!! GATAATCTATACATAGAATT+GGG - Chr4:80131171-80131190 None:intergenic 20.0%
!! GGATATTTACATCAATAATA+TGG + Chr4:80133322-80133341 MsG0480023044.01.T01:intron 20.0%
!! TAAAAAAAAGGTAAAAAGCA+TGG + Chr4:80132956-80132975 MsG0480023044.01.T01:intron 20.0%
!! TAAACCAGAATAATTCAAAA+AGG - Chr4:80131263-80131282 None:intergenic 20.0%
!! TAGTAAGATATTGCAATTAT+TGG - Chr4:80133945-80133964 None:intergenic 20.0%
!! TCTACTAACTACAATTAATA+AGG + Chr4:80132807-80132826 MsG0480023044.01.T01:intron 20.0%
!! TGAATGAAATTCAATACATA+AGG - Chr4:80132777-80132796 None:intergenic 20.0%
!! TTTATGTAACATACTCATTT+GGG + Chr4:80132262-80132281 MsG0480023044.01.T01:intron 20.0%
!!! AAATTTAAGGCATTATTGTA+AGG - Chr4:80134019-80134038 None:intergenic 20.0%
!!! AATACATAAGGGTATAATAA+TGG - Chr4:80132765-80132784 None:intergenic 20.0%
!!! ATGATAAATAGTCTTCTTTT+AGG + Chr4:80132985-80133004 MsG0480023044.01.T01:intron 20.0%
!!! ATTAATTGTGTTGATTTCAA+TGG - Chr4:80132860-80132879 None:intergenic 20.0%
!!! CTTTAGAATTTGAAAGTTTA+AGG - Chr4:80130728-80130747 None:intergenic 20.0%
!!! TTATTGGTTTAAATCATTGT+GGG - Chr4:80132421-80132440 None:intergenic 20.0%
!!! TTTATTGGTTTAAATCATTG+TGG - Chr4:80132422-80132441 None:intergenic 20.0%
!!! TTTTTGGAACTTGAATTTTT+GGG + Chr4:80131427-80131446 MsG0480023044.01.T01:CDS 20.0%
!!! TTTTTTGGAACTTGAATTTT+TGG + Chr4:80131426-80131445 MsG0480023044.01.T01:CDS 20.0%
!!! TTTTTTTGTGATTTGGTTTT+GGG - Chr4:80130862-80130881 None:intergenic 20.0%
!!! TTTTTTTTGTGATTTGGTTT+TGG - Chr4:80134168-80134187 None:intergenic 20.0%
! AAACGACTATAATTTAGAGA+CGG + Chr4:80132909-80132928 MsG0480023044.01.T01:intron 25.0%
! AAATCAAAAAGAATCCAACA+TGG + Chr4:80130750-80130769 MsG0480023044.01.T01:intron 25.0%
! AACTGTAACGTATAAATGTA+AGG - Chr4:80133561-80133580 None:intergenic 25.0%
! AATCAAAAAGAATCCAACAT+GGG + Chr4:80130751-80130770 MsG0480023044.01.T01:intron 25.0%
! AATCAAAGACATTAACACAA+AGG - Chr4:80131321-80131340 None:intergenic 25.0%
! ATCAAAGACATTAACACAAA+GGG - Chr4:80131320-80131339 None:intergenic 25.0%
! CACAAAAGTTGTCATATAAA+TGG + Chr4:80132614-80132633 MsG0480023044.01.T01:intron 25.0%
! GGATTCATACCAAAAATATT+TGG + Chr4:80131749-80131768 MsG0480023044.01.T01:CDS 25.0%
! TACAATGAAAAGACCTTATA+AGG + Chr4:80131944-80131963 MsG0480023044.01.T01:CDS 25.0%
! TTAAGTTTCAAAGGTTAGAT+AGG - Chr4:80133786-80133805 None:intergenic 25.0%
! TTGAAATATTGGATGGAAAT+TGG + Chr4:80131647-80131666 MsG0480023044.01.T01:CDS 25.0%
! TTTGTAATAATTTCCAGATG+AGG + Chr4:80132296-80132315 MsG0480023044.01.T01:intron 25.0%
!! ATAGATCCTTTAAGTTTCAA+AGG - Chr4:80133795-80133814 None:intergenic 25.0%
!! GATCTTTCACCAAATATTTT+TGG - Chr4:80131761-80131780 None:intergenic 25.0%
!! GTTGTCTTTTTGAATTATTC+TGG + Chr4:80131256-80131275 MsG0480023044.01.T01:intron 25.0%
!! TATAAGGTCTTTTCATTGTA+GGG - Chr4:80131944-80131963 None:intergenic 25.0%
!! TTATAAGGTCTTTTCATTGT+AGG - Chr4:80131945-80131964 None:intergenic 25.0%
!! TTGTCCTTTTTGAATTATTC+TGG + Chr4:80134566-80134585 MsG0480023044.01.T01:CDS 25.0%
!!! ATCTAACCTTTGAAACTTAA+AGG + Chr4:80133786-80133805 MsG0480023044.01.T01:intron 25.0%
!!! ATGTTGGATTCTTTTTGATT+TGG - Chr4:80130751-80130770 None:intergenic 25.0%
!!! CTTTAAGTTTGTTTTCAGAT+AGG - Chr4:80133731-80133750 None:intergenic 25.0%
!!! CTTTTTTTGTGATTTGGTTT+TGG - Chr4:80130863-80130882 None:intergenic 25.0%
!!! TGCTAGTTTTTTTTGTGATT+TGG - Chr4:80134174-80134193 None:intergenic 25.0%
!!! TTTTTTGTGATTTGGTTTTG+GGG - Chr4:80130861-80130880 None:intergenic 25.0%
AAAATTGAACCCACACAAAA+TGG - Chr4:80132387-80132406 None:intergenic 30.0%
AAGTAGATGAGAAAGATTAG+AGG - Chr4:80130898-80130917 None:intergenic 30.0%
AAGTTTCAAAGGTTACAGAT+AGG + Chr4:80133654-80133673 MsG0480023044.01.T01:intron 30.0%
AATCCAAGAATTGCAAAAAG+TGG - Chr4:80130971-80130990 None:intergenic 30.0%
AATCTTTCTCATCTACTTTG+AGG + Chr4:80134205-80134224 MsG0480023044.01.T01:intron 30.0%
ACATAATTCTTCCCCATATT+AGG + Chr4:80133389-80133408 MsG0480023044.01.T01:intron 30.0%
ACTGAATTAACTACTCTAAC+AGG - Chr4:80133166-80133185 None:intergenic 30.0%
AGTAGATGAGAAAGATTAGA+GGG - Chr4:80130897-80130916 None:intergenic 30.0%
AGTGCTTTCTTAACATTCTT+AGG + Chr4:80132065-80132084 MsG0480023044.01.T01:CDS 30.0%
ATTAAACCAAAGAATCCAAG+TGG - Chr4:80131972-80131991 None:intergenic 30.0%
ATTACTCTTTGCAGATTTAG+GGG + Chr4:80132486-80132505 MsG0480023044.01.T01:intron 30.0%
CATAATTCTTCCCCATATTA+GGG + Chr4:80133390-80133409 MsG0480023044.01.T01:intron 30.0%
CATCTTATACCAATACAACA+AGG - Chr4:80130641-80130660 None:intergenic 30.0%
CATTACTCTTTGCAGATTTA+GGG + Chr4:80132485-80132504 MsG0480023044.01.T01:intron 30.0%
CTAAAATTGATCCTAGTAGA+TGG + Chr4:80131348-80131367 MsG0480023044.01.T01:CDS 30.0%
CTATCAAGTAATCTCTATGT+TGG - Chr4:80133099-80133118 None:intergenic 30.0%
CTATTACAAACGTGAAACTA+AGG - Chr4:80133624-80133643 None:intergenic 30.0%
CTGAAACCTTAGAAACTTAA+AGG + Chr4:80133759-80133778 MsG0480023044.01.T01:intron 30.0%
CTGAATTAACTACTCTAACA+GGG - Chr4:80133165-80133184 None:intergenic 30.0%
CTGGAATACTCCAAATAAAT+GGG - Chr4:80134310-80134329 None:intergenic 30.0%
GAATTGGTTGAAATATTGGA+TGG + Chr4:80131640-80131659 MsG0480023044.01.T01:CDS 30.0%
GGGTTATATAATTCCTTTGT+TGG + Chr4:80131538-80131557 MsG0480023044.01.T01:CDS 30.0%
GTGCTTTCTTAACATTCTTA+GGG + Chr4:80132066-80132085 MsG0480023044.01.T01:CDS 30.0%
GTTTCACGTTTGTAATAGAT+AGG + Chr4:80133626-80133645 MsG0480023044.01.T01:intron 30.0%
TAATCTTTCTCATCTACTTG+AGG + Chr4:80130899-80130918 MsG0480023044.01.T01:intron 30.0%
TAGTCCAATTCTAATGTCTA+AGG - Chr4:80130686-80130705 None:intergenic 30.0%
TATCTCTAGCACTCATTTAT+TGG + Chr4:80132340-80132359 MsG0480023044.01.T01:intron 30.0%
TATTCTATTCACCTTAGACA+TGG + Chr4:80133974-80133993 MsG0480023044.01.T01:intron 30.0%
TGCTACCAAAATTGTATATG+TGG + Chr4:80132040-80132059 MsG0480023044.01.T01:CDS 30.0%
TGTTACAAACGTGAAACTTA+AGG + Chr4:80133816-80133835 MsG0480023044.01.T01:intron 30.0%
TTACTAAATTCTTACTCGTG+AGG + Chr4:80132557-80132576 MsG0480023044.01.T01:intron 30.0%
TTCACCTTAGACATTAGAAT+TGG + Chr4:80130679-80130698 MsG0480023044.01.T01:intron 30.0%
! ACTAGCCACATATACAATTT+TGG - Chr4:80132048-80132067 None:intergenic 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG - Chr4:80133768-80133787 None:intergenic 30.0%
! ATCTGAAACCTAGAAACTTA+AGG - Chr4:80133681-80133700 None:intergenic 30.0%
! ATTTATTTGGAGTATTCCAG+AGG + Chr4:80134310-80134329 MsG0480023044.01.T01:CDS 30.0%
! CATCTACTAGGATCAATTTT+AGG - Chr4:80131350-80131369 None:intergenic 30.0%
! GGATATTGGAAATTCTTTTG+TGG + Chr4:80134431-80134450 MsG0480023044.01.T01:CDS 30.0%
! GTATAGTTTAGGTATGCTTT+TGG + Chr4:80131884-80131903 MsG0480023044.01.T01:intron 30.0%
! TATTTGGTGAAAGATCAAAG+TGG + Chr4:80131765-80131784 MsG0480023044.01.T01:CDS 30.0%
! TCTGGAATACTCCAAATAAA+TGG - Chr4:80134311-80134330 None:intergenic 30.0%
!! AAATGGTGGGTTTGTTATTT+GGG + Chr4:80131063-80131082 MsG0480023044.01.T01:CDS 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG - Chr4:80133757-80133776 None:intergenic 30.0%
!! AGTGCTTTGAAGTTAGTTAA+AGG + Chr4:80133183-80133202 MsG0480023044.01.T01:intron 30.0%
!! AGTTTTGTACACGATTATTC+AGG - Chr4:80132888-80132907 None:intergenic 30.0%
!! CTGCTCAGCTTTTAAAAAAA+AGG + Chr4:80132944-80132963 MsG0480023044.01.T01:intron 30.0%
!! GCTTTTGGAAAAGTTTTATG+TGG - Chr4:80131488-80131507 None:intergenic 30.0%
!! GTTTAGAAGATGTTGATGAT+AGG - Chr4:80134120-80134139 None:intergenic 30.0%
!! TATTCTGGTTTAGCTATAGT+TGG + Chr4:80131271-80131290 MsG0480023044.01.T01:intron 30.0%
!! TCTGTAACCTTTGAAACTTA+AGG - Chr4:80133653-80133672 None:intergenic 30.0%
!!! GCTTTAGGAAAAGTTTTATG+TGG - Chr4:80134811-80134830 None:intergenic 30.0%
!!! GGAATTTTTTCCTCAACTTA+AGG - Chr4:80131923-80131942 None:intergenic 30.0%
!!! TGCTAGCTTTTTTTGTGATT+TGG - Chr4:80130869-80130888 None:intergenic 30.0%
AACCAAACTTCTTGATCAAG+TGG - Chr4:80134904-80134923 None:intergenic 35.0%
AAGAGACAATTATTGCGAGA+CGG - Chr4:80132676-80132695 None:intergenic 35.0%
AATCCAAGTGGAACCTTATA+AGG - Chr4:80131960-80131979 None:intergenic 35.0%
ACATTAACACAAAGGGCAAA+AGG - Chr4:80131313-80131332 None:intergenic 35.0%
ACCTAGATAACAATGCAATG+TGG + Chr4:80133244-80133263 MsG0480023044.01.T01:intron 35.0%
ACTTGATCAAGAAGTTTGGT+TGG + Chr4:80134903-80134922 MsG0480023044.01.T01:CDS 35.0%
AGATAGGTCCTTAAGTTTCT+AGG + Chr4:80133670-80133689 MsG0480023044.01.T01:intron 35.0%
AGATTACTTGATAGACTCTC+AGG + Chr4:80133105-80133124 MsG0480023044.01.T01:intron 35.0%
ATAGTTGGTTATACTGCAGT+TGG + Chr4:80134596-80134615 MsG0480023044.01.T01:CDS 35.0%
ATTCACCTTAGACATGGAAT+TGG + Chr4:80133980-80133999 MsG0480023044.01.T01:intron 35.0%
CATTAACACAAAGGGCAAAA+GGG - Chr4:80131312-80131331 None:intergenic 35.0%
CCTAAACTTAACCATCTACT+AGG - Chr4:80131362-80131381 None:intergenic 35.0%
CCTAGTAGATGGTTAAGTTT+AGG + Chr4:80131359-80131378 MsG0480023044.01.T01:CDS 35.0%
CTGGGAATTGGTTGAAATAT+TGG + Chr4:80131636-80131655 MsG0480023044.01.T01:CDS 35.0%
CTGGGATACTCCAAATAAAT+GGG - Chr4:80131003-80131022 None:intergenic 35.0%
GAAATCAAAATTGCCATCGA+AGG - Chr4:80131800-80131819 None:intergenic 35.0%
GACAAAATAGACACAATACG+AGG - Chr4:80134536-80134555 None:intergenic 35.0%
GACTATAATTTAGAGACGGA+GGG + Chr4:80132913-80132932 MsG0480023044.01.T01:intron 35.0%
GATAGGTCCTTAAGTTTCAA+AGG + Chr4:80133643-80133662 MsG0480023044.01.T01:intron 35.0%
GCATTACTCTTTGCAGATTT+AGG + Chr4:80132484-80132503 MsG0480023044.01.T01:intron 35.0%
GCCTTAAATTTCCACATCTA+AGG + Chr4:80134028-80134047 MsG0480023044.01.T01:intron 35.0%
GCCTTAGATGTGGAAATTTA+AGG - Chr4:80134032-80134051 None:intergenic 35.0%
GGTTTGAATCTTCTTCTCTT+TGG - Chr4:80130840-80130859 None:intergenic 35.0%
TAGGGGAAAGTCATCAATTT+AGG - Chr4:80133469-80133488 None:intergenic 35.0%
TAGGTTTCAGATAGTCCTTA+CGG + Chr4:80133689-80133708 MsG0480023044.01.T01:intron 35.0%
TCCACATTGCATTGTTATCT+AGG - Chr4:80133248-80133267 None:intergenic 35.0%
TCCTAAACTTACCATCTACT+AGG - Chr4:80134686-80134705 None:intergenic 35.0%
TCCTAGTAGATGGTAAGTTT+AGG + Chr4:80134682-80134701 MsG0480023044.01.T01:intron 35.0%
TGAATCTTTGCAAGTCTAAG+AGG + Chr4:80132108-80132127 MsG0480023044.01.T01:CDS 35.0%
TTGGATCTTCTTCTTCTCTT+TGG - Chr4:80134142-80134161 None:intergenic 35.0%
! AAGAGGGTGTAGAAAAAGAT+TGG + Chr4:80131384-80131403 MsG0480023044.01.T01:CDS 35.0%
! AGTGCTGCATATCAACTTTT+AGG + Chr4:80131713-80131732 MsG0480023044.01.T01:CDS 35.0%
! ATGAAGCTTTTGGTCCATTT+TGG + Chr4:80131089-80131108 MsG0480023044.01.T01:CDS 35.0%
! ATGGTAAGTTTAGGACAAGA+GGG + Chr4:80134691-80134710 MsG0480023044.01.T01:intron 35.0%
! ATGGTTAAGTTTAGGACAAG+AGG + Chr4:80131367-80131386 MsG0480023044.01.T01:CDS 35.0%
! ATGTCTTTGCCTTGTTGTAT+TGG + Chr4:80130629-80130648 MsG0480023044.01.T01:CDS 35.0%
! ATTTGGGCTAATGAAGCTTT+TGG + Chr4:80131079-80131098 MsG0480023044.01.T01:CDS 35.0%
! CCAGCAAATAACAAAGCTTT+TGG - Chr4:80131503-80131522 None:intergenic 35.0%
! GGTTTAGCTATAGTTGGTTT+AGG + Chr4:80131277-80131296 MsG0480023044.01.T01:intron 35.0%
! GTTTTGTGTTGAAGAGTGAA+GGG - Chr4:80130794-80130813 None:intergenic 35.0%
! TCAAACTTGCTCCCTAATAT+GGG - Chr4:80133404-80133423 None:intergenic 35.0%
! TCTGGGATACTCCAAATAAA+TGG - Chr4:80131004-80131023 None:intergenic 35.0%
! TGAAGCTTTTGGTCCATTTT+GGG + Chr4:80131090-80131109 MsG0480023044.01.T01:CDS 35.0%
! TGGTTAAGTTTAGGACAAGA+GGG + Chr4:80131368-80131387 MsG0480023044.01.T01:CDS 35.0%
! TTGCTTCTTTCCTTAAGTTG+AGG + Chr4:80131910-80131929 MsG0480023044.01.T01:CDS 35.0%
!! ACTTTTAGGTATGTCTGACT+TGG + Chr4:80131727-80131746 MsG0480023044.01.T01:CDS 35.0%
!! AGTTTTGTGTTGAAGAGTGA+AGG - Chr4:80130795-80130814 None:intergenic 35.0%
!! CCAAAAGCTTTGTTATTTGC+TGG + Chr4:80131500-80131519 MsG0480023044.01.T01:CDS 35.0%
!! CTTTTAGGTATGTCTGACTT+GGG + Chr4:80131728-80131747 MsG0480023044.01.T01:CDS 35.0%
!! GAAATGGTGGGTTTGTTATT+TGG + Chr4:80131062-80131081 MsG0480023044.01.T01:CDS 35.0%
!! GCTGGATTGTTAACTTGTTT+GGG + Chr4:80131518-80131537 MsG0480023044.01.T01:CDS 35.0%
!! GGCTACTGGAAATATTTTTG+TGG + Chr4:80131124-80131143 MsG0480023044.01.T01:CDS 35.0%
!! TATGAATTTGGCCTTAGATG+TGG - Chr4:80134042-80134061 None:intergenic 35.0%
!! TGCTGGATTGTTAACTTGTT+TGG + Chr4:80131517-80131536 MsG0480023044.01.T01:CDS 35.0%
!!! AGGTCACTTTTTGCAATTCT+TGG + Chr4:80130965-80130984 MsG0480023044.01.T01:intron 35.0%
!!! GGTGCTGTTTTGTCAATTAT+TGG + Chr4:80131668-80131687 MsG0480023044.01.T01:CDS 35.0%
AAGGTTCCACTTGGATTCTT+TGG + Chr4:80131963-80131982 MsG0480023044.01.T01:CDS 40.0%
ACATAAACCAACAGCACAGA+TGG - Chr4:80132011-80132030 None:intergenic 40.0%
ACATGTGATGGTCTAGGAAT+AGG - Chr4:80133488-80133507 None:intergenic 40.0%
ACCCAAACTTCTTGATCAAG+TGG - Chr4:80131581-80131600 None:intergenic 40.0%
ACCTTAGACATGGAATTGGA+TGG + Chr4:80133984-80134003 MsG0480023044.01.T01:intron 40.0%
AGAATCATAAGCACCCATGT+TGG - Chr4:80130767-80130786 None:intergenic 40.0%
AGACCTTATAAGGTTCCACT+TGG + Chr4:80131954-80131973 MsG0480023044.01.T01:CDS 40.0%
ATAACAAACCCACCATTTCC+AGG - Chr4:80131061-80131080 None:intergenic 40.0%
ATAACGTGCACTACATGTGA+TGG - Chr4:80133500-80133519 None:intergenic 40.0%
ATCTCATACCCAACACAACA+AGG - Chr4:80133884-80133903 None:intergenic 40.0%
ATCTTTGCAAGTCTAAGAGG+TGG + Chr4:80132111-80132130 MsG0480023044.01.T01:CDS 40.0%
ATGTGATGGTCTAGGAATAG+GGG - Chr4:80133486-80133505 None:intergenic 40.0%
ATTCTTACTCGTGAGGATGA+AGG + Chr4:80132564-80132583 MsG0480023044.01.T01:intron 40.0%
ATTGAACCCACACAAAATGG+TGG - Chr4:80132384-80132403 None:intergenic 40.0%
CATGTGATGGTCTAGGAATA+GGG - Chr4:80133487-80133506 None:intergenic 40.0%
CCAATTTATCTCCTACTCCA+CGG - Chr4:80132145-80132164 None:intergenic 40.0%
CCAGCAAAAAGCAAAGCTTT+AGG - Chr4:80134826-80134845 None:intergenic 40.0%
CGACTATAATTTAGAGACGG+AGG + Chr4:80132912-80132931 MsG0480023044.01.T01:intron 40.0%
CTTGATCAAGAAGTTTGGGT+TGG + Chr4:80131581-80131600 MsG0480023044.01.T01:CDS 40.0%
GAATTAGCTACAACATTCCC+TGG + Chr4:80134347-80134366 MsG0480023044.01.T01:CDS 40.0%
GATAGTGCTAGTACTTTAGC+TGG + Chr4:80134772-80134791 MsG0480023044.01.T01:intron 40.0%
GCCACTTGATCAAGAAGTTT+GGG + Chr4:80131577-80131596 MsG0480023044.01.T01:CDS 40.0%
GGTAAACCTGAAGACAAAAC+AGG - Chr4:80131205-80131224 None:intergenic 40.0%
TAACAAACCCACCATTTCCA+GGG - Chr4:80131060-80131079 None:intergenic 40.0%
TCCATCCAATTCCATGTCTA+AGG - Chr4:80133988-80134007 None:intergenic 40.0%
TGCATGGCTGCAACTTAATT+TGG + Chr4:80132587-80132606 MsG0480023044.01.T01:intron 40.0%
TTGAACCCACACAAAATGGT+GGG - Chr4:80132383-80132402 None:intergenic 40.0%
! AAGCTTTTGGTCCATTTTGG+GGG + Chr4:80131092-80131111 MsG0480023044.01.T01:CDS 40.0%
! AATTTTGTGCTGCAGAGTGA+AGG - Chr4:80134097-80134116 None:intergenic 40.0%
! ACTGTTGCTTCTTCACCATA+AGG - Chr4:80130936-80130955 None:intergenic 40.0%
! ATGTCTTTGCCTTGTTGTGT+TGG + Chr4:80133872-80133891 MsG0480023044.01.T01:intron 40.0%
! ATTCCTTTGTTGGCTACTAC+CGG + Chr4:80131548-80131567 MsG0480023044.01.T01:CDS 40.0%
! ATTCCTTTGTTGGCTACTAC+TGG + Chr4:80131548-80131567 MsG0480023044.01.T01:CDS 40.0%
! CAAACTTGCTCCCTAATATG+GGG - Chr4:80133403-80133422 None:intergenic 40.0%
! GAAGCTTTTGGTCCATTTTG+GGG + Chr4:80131091-80131110 MsG0480023044.01.T01:CDS 40.0%
! GATGGTAAGTTTAGGACAAG+AGG + Chr4:80134690-80134709 MsG0480023044.01.T01:intron 40.0%
! GGTTATACTGCAGTTGGTTT+AGG + Chr4:80134602-80134621 MsG0480023044.01.T01:CDS 40.0%
! GTCAAACTTGCTCCCTAATA+TGG - Chr4:80133405-80133424 None:intergenic 40.0%
! GTGATTCCTGTTTTGTCTTC+AGG + Chr4:80131196-80131215 MsG0480023044.01.T01:CDS 40.0%
! TATGTCCCACCATTTTGTGT+GGG + Chr4:80132375-80132394 MsG0480023044.01.T01:intron 40.0%
! TCTCATCTACTTGAGGTATC+TGG + Chr4:80130906-80130925 MsG0480023044.01.T01:intron 40.0%
! TGCCACTTGATCAAGAAGTT+TGG + Chr4:80131576-80131595 MsG0480023044.01.T01:CDS 40.0%
! TGTCTTTGCCTTGTTGTGTT+GGG + Chr4:80133873-80133892 MsG0480023044.01.T01:intron 40.0%
! TTTTGTTCCATCTGTGCTGT+TGG + Chr4:80132001-80132020 MsG0480023044.01.T01:CDS 40.0%
!! ATCAAGAAGTTTGGGTTGGT+GGG + Chr4:80131585-80131604 MsG0480023044.01.T01:CDS 40.0%
!! ATCTACTTTGAGGTATCTGG+TGG + Chr4:80134215-80134234 MsG0480023044.01.T01:intron 40.0%
!! CTCATCTACTTTGAGGTATC+TGG + Chr4:80134212-80134231 MsG0480023044.01.T01:intron 40.0%
!!! CCTAAAGCTTTGCTTTTTGC+TGG + Chr4:80134823-80134842 MsG0480023044.01.T01:CDS 40.0%
!!! GGTCCACTTTTTGCAATTCT+TGG + Chr4:80134272-80134291 MsG0480023044.01.T01:CDS 40.0%
!!! TGTGATTTGGTTTTGGGGTT+TGG - Chr4:80130856-80130875 None:intergenic 40.0%
AAACGTGAAACTAAGGACCC+AGG - Chr4:80133617-80133636 None:intergenic 45.0%
AACGTGAAACTAAGGACCCA+GGG - Chr4:80133616-80133635 None:intergenic 45.0%
AACGTGAAACTTAAGGACCC+AGG + Chr4:80133823-80133842 MsG0480023044.01.T01:intron 45.0%
AATGTAGGCCAAATACCTCC+TGG - Chr4:80133844-80133863 None:intergenic 45.0%
ACAACATTCCCTGGAAATGG+TGG + Chr4:80134356-80134375 MsG0480023044.01.T01:CDS 45.0%
AGACAATTATTGCGAGACGG+AGG - Chr4:80132673-80132692 None:intergenic 45.0%
ATGTAGGCCAAATACCTCCT+GGG - Chr4:80133843-80133862 None:intergenic 45.0%
CAACATTCCCTGGAAATGGT+GGG + Chr4:80134357-80134376 MsG0480023044.01.T01:CDS 45.0%
CCGTGGAGTAGGAGATAAAT+TGG + Chr4:80132142-80132161 MsG0480023044.01.T01:intron 45.0%
CCTTTCTATCAACCTCCGTA+AGG - Chr4:80133707-80133726 None:intergenic 45.0%
CTGCAGTTAACAGAGCTTCT+GGG - Chr4:80131021-80131040 None:intergenic 45.0%
GAATTAGCTACAGCATTCGC+TGG + Chr4:80131040-80131059 MsG0480023044.01.T01:CDS 45.0%
GACAAAACTGACACTGTACG+AGG - Chr4:80131226-80131245 None:intergenic 45.0%
GACAATTATTGCGAGACGGA+GGG - Chr4:80132672-80132691 None:intergenic 45.0%
GATAGTGCTAGCACTTTAGC+TGG + Chr4:80131449-80131468 MsG0480023044.01.T01:CDS 45.0%
GATTTAGGGGTGAACAAGAC+TGG + Chr4:80132499-80132518 MsG0480023044.01.T01:intron 45.0%
GCTACAACATTCCCTGGAAA+TGG + Chr4:80134353-80134372 MsG0480023044.01.T01:CDS 45.0%
GTGGTTTAACACACCTTCGA+TGG + Chr4:80131784-80131803 MsG0480023044.01.T01:CDS 45.0%
GTTTCAGATAGTCCTTACGG+AGG + Chr4:80133692-80133711 MsG0480023044.01.T01:intron 45.0%
TCTGCAGTTAAAAGAGCCTC+TGG - Chr4:80134329-80134348 None:intergenic 45.0%
TCTGCAGTTAACAGAGCTTC+TGG - Chr4:80131022-80131041 None:intergenic 45.0%
TGCACTACATGTGATGGTCT+AGG - Chr4:80133494-80133513 None:intergenic 45.0%
TGTTGCTAGCATTCCTCATC+TGG - Chr4:80132312-80132331 None:intergenic 45.0%
! ATTTAAGGCCAATACCTCCC+TGG + Chr4:80133596-80133615 MsG0480023044.01.T01:intron 45.0%
! CATCTACTTGAGGTATCTGG+TGG + Chr4:80130909-80130928 MsG0480023044.01.T01:intron 45.0%
! CTGGTTTGATTGCTGGGAAT+TGG + Chr4:80131624-80131643 MsG0480023044.01.T01:CDS 45.0%
! GTATGTCCCACCATTTTGTG+TGG + Chr4:80132374-80132393 MsG0480023044.01.T01:intron 45.0%
! TTCCTTTGTTGGCTACTACC+GGG + Chr4:80134872-80134891 MsG0480023044.01.T01:CDS 45.0%
! TTTAAGGCCAATACCTCCCT+GGG + Chr4:80133597-80133616 MsG0480023044.01.T01:intron 45.0%
!! ATGTGGCTGGTTTGATTGCT+GGG + Chr4:80131618-80131637 MsG0480023044.01.T01:CDS 45.0%
!! CCATTTTGGGGGTCTCTTAT+GGG + Chr4:80131103-80131122 MsG0480023044.01.T01:CDS 45.0%
!! CCTTACGGAGGTTGATAGAA+AGG + Chr4:80133704-80133723 MsG0480023044.01.T01:intron 45.0%
!! GATCAAGAAGTTTGGGTTGG+TGG + Chr4:80131584-80131603 MsG0480023044.01.T01:CDS 45.0%
!! TCCATTTTGGGGGTCTCTTA+TGG + Chr4:80131102-80131121 MsG0480023044.01.T01:CDS 45.0%
!! TGGTGGGTATTTTGCACATG+TGG + Chr4:80131601-80131620 MsG0480023044.01.T01:CDS 45.0%
!! TTAAGGACCCAGGAGGTATT+TGG + Chr4:80133833-80133852 MsG0480023044.01.T01:intron 45.0%
ACAGCATTCGCTGGAAATGG+TGG + Chr4:80131049-80131068 MsG0480023044.01.T01:CDS 50.0%
CAGCATTCGCTGGAAATGGT+GGG + Chr4:80131050-80131069 MsG0480023044.01.T01:CDS 50.0%
CCCATAAGAGACCCCCAAAA+TGG - Chr4:80131106-80131125 None:intergenic 50.0%
GCACCAGTAGTAGCCAACAA+AGG - Chr4:80131554-80131573 None:intergenic 50.0%
GCTACAGCATTCGCTGGAAA+TGG + Chr4:80131046-80131065 MsG0480023044.01.T01:CDS 50.0%
GGGGGTCTCTTATGGGATAT+TGG + Chr4:80134417-80134436 MsG0480023044.01.T01:CDS 50.0%
GTGAAACTTAAGGACCCAGG+AGG + Chr4:80133826-80133845 MsG0480023044.01.T01:intron 50.0%
TGGATTGAGTTCCGTGGAGT+AGG + Chr4:80132131-80132150 MsG0480023044.01.T01:intron 50.0%
TTGATCAAGTGGCATAGCCC+CGG - Chr4:80134893-80134912 None:intergenic 50.0%
! GAAGCAACAGTAAGTGCTGC+AGG + Chr4:80130945-80130964 MsG0480023044.01.T01:intron 50.0%
! GAGGTATCTGGTGGACCTTA+TGG + Chr4:80130918-80130937 MsG0480023044.01.T01:intron 50.0%
! GGGTATTTTGCACATGTGGC+TGG + Chr4:80131605-80131624 MsG0480023044.01.T01:CDS 50.0%
! TCCTTTGTTGGCTACTACCG+GGG + Chr4:80134873-80134892 MsG0480023044.01.T01:CDS 50.0%
!! AAGAGGTGGATTGAGTTCCG+TGG + Chr4:80132125-80132144 MsG0480023044.01.T01:CDS 50.0%
!! CATGTGGCTGGTTTGATTGC+TGG + Chr4:80131617-80131636 MsG0480023044.01.T01:CDS 50.0%
GTGAAACTAAGGACCCAGGG+AGG - Chr4:80133613-80133632 None:intergenic 55.0%
! CTAAGGACCCAGGGAGGTAT+TGG - Chr4:80133607-80133626 None:intergenic 55.0%
! CTCGTGAGGATGAAGGTGCA+TGG + Chr4:80132571-80132590 MsG0480023044.01.T01:intron 55.0%
GCCCCGGTAGTAGCCAACAA+AGG - Chr4:80134877-80134896 None:intergenic 60.0%
! GGGGGTCTCTTATGGGCTAC+TGG + Chr4:80131110-80131129 MsG0480023044.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 80130629 80134954 80130629 ID=MsG0480023044.01;Name=MsG0480023044.01
Chr4 mRNA 80130629 80134954 80130629 ID=MsG0480023044.01.T01;Parent=MsG0480023044.01;Name=MsG0480023044.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.83|0.8|0.83|6|0|535
Chr4 exon 80130629 80130650 80130629 ID=MsG0480023044.01.T01:exon:23628;Parent=MsG0480023044.01.T01
Chr4 exon 80131023 80131217 80131023 ID=MsG0480023044.01.T01:exon:23629;Parent=MsG0480023044.01.T01
Chr4 exon 80131345 80131836 80131345 ID=MsG0480023044.01.T01:exon:23630;Parent=MsG0480023044.01.T01
Chr4 exon 80131895 80132148 80131895 ID=MsG0480023044.01.T01:exon:23631;Parent=MsG0480023044.01.T01
Chr4 exon 80134227 80134693 80134227 ID=MsG0480023044.01.T01:exon:23632;Parent=MsG0480023044.01.T01
Chr4 exon 80134777 80134954 80134777 ID=MsG0480023044.01.T01:exon:23633;Parent=MsG0480023044.01.T01
Chr4 CDS 80130629 80130650 80130629 ID=MsG0480023044.01.T01:cds;Parent=MsG0480023044.01.T01
Chr4 CDS 80131023 80131217 80131023 ID=MsG0480023044.01.T01:cds;Parent=MsG0480023044.01.T01
Chr4 CDS 80131345 80131836 80131345 ID=MsG0480023044.01.T01:cds;Parent=MsG0480023044.01.T01
Chr4 CDS 80131895 80132148 80131895 ID=MsG0480023044.01.T01:cds;Parent=MsG0480023044.01.T01
Chr4 CDS 80134227 80134693 80134227 ID=MsG0480023044.01.T01:cds;Parent=MsG0480023044.01.T01
Chr4 CDS 80134777 80134954 80134777 ID=MsG0480023044.01.T01:cds;Parent=MsG0480023044.01.T01
Gene Sequence

>MsG0480023044.01.T01

ATGTCTTTGCCTTGTTGTATTGAAGCTCTGTTAACTGCAGAATTAGCTACAGCATTCGCTGGAAATGGTGGGTTTGTTATTTGGGCTAATGAAGCTTTTGGTCCATTTTGGGGGTCTCTTATGGGCTACTGGAAATATTTTTGTGGTGTCATAAATTTAGCATCTTTCCCAATTCTATGTATAGATTATCTCATTGTGATTCCTGTTTTGTCTTCAGTGCCTAAAATTGATCCTAGTAGATGGTTAAGTTTAGGACAAGAGGGTGTAGAAAAAGATTGGACACTTTTTTTCAATACTATTTTTTGGAACTTGAATTTTTGGGATAGTGCTAGCACTTTAGCTGGTGAAGTTGAAGAGCCACATAAAACTTTTCCAAAAGCTTTGTTATTTGCTGGATTGTTAACTTGTTTGGGTTATATAATTCCTTTGTTGGCTACTACTGGTGCTATGCCACTTGATCAAGAAGTTTGGGTTGGTGGGTATTTTGCACATGTGGCTGGTTTGATTGCTGGGAATTGGTTGAAATATTGGATGGAAATTGGTGCTGTTTTGTCAATTATTGGATTATTTGAAGCTCAATTAAGTAGTGCTGCATATCAACTTTTAGGTATGTCTGACTTGGGATTCATACCAAAAATATTTGGTGAAAGATCAAAGTGGTTTAACACACCTTCGATGGCAATTTTGATTTCAACAATAATATCACTTGGTATGCTTTTGGAGTTTGCTTCTTTCCTTAAGTTGAGGAAAAAATTCCCTACAATGAAAAGACCTTATAAGGTTCCACTTGGATTCTTTGGTTTAATTCTAATGTGTTTTGTTCCATCTGTGCTGTTGGTTTATGTGATGACTGTTGCTACCAAAATTGTATATGTGGCTAGTGCTTTCTTAACATTCTTAGGGATAGTGTTGTATTATTTCATGAATCTTTGCAAGTCTAAGAGGTGGATTGAGTTCCGTGGAGTATCTGGTGGACCTTATGGTGAAGAAGCAACAGTAAGTGCTGCAGGTCCACTTTTTGCAATTCTTGGATTTATAATTTTCCCATTTATTTGGAGTATTCCAGAGGCTCTTTTAACTGCAGAATTAGCTACAACATTCCCTGGAAATGGTGGGTTTGTTATTTGGGCTAATGAAGCTTTTGGTCCATTTTGGGGGTCTCTTATGGGATATTGGAAATTCTTTTGTGGTGTCATAAATTTAGCATCTTACCCAATTCTATGTATAGATTATCTTAAAGTTGTGATTCCTGTTTTGTCTTCAGGTTTACCTCGTATTGTGTCTATTTTGTCTCAACTTCTGTTGTCCTTTTTGAATTATTCTGGTTTAGCTATAGTTGGTTATACTGCAGTTGGTTTAGGTGTTATTTCCCTTTTGCCCTTTGTGTTAATGTCTTTGATTTCAGTGCCTAAAATTGATCCTAGTAGATGTGCTAGTACTTTAGCTGGTGAAGTTGAAGAGCCACATAAAACTTTTCCTAAAGCTTTGCTTTTTGCTGGATTGTTAACTTGTTTGGGTTATATAATTCCTTTGTTGGCTACTACCGGGGCTATGCCACTTGATCAAGAAGTTTGGTTGGTGGGTATTTTGCACATGTGGCTGGTTTGA
Protein sequence

>MsG0480023044.01.T01

MSLPCCIEALLTAELATAFAGNGGFVIWANEAFGPFWGSLMGYWKYFCGVINLASFPILCIDYLIVIPVLSSVPKIDPSRWLSLGQEGVEKDWTLFFNTIFWNLNFWDSASTLAGEVEEPHKTFPKALLFAGLLTCLGYIIPLLATTGAMPLDQEVWVGGYFAHVAGLIAGNWLKYWMEIGAVLSIIGLFEAQLSSAAYQLLGMSDLGFIPKIFGERSKWFNTPSMAILISTIISLGMLLEFASFLKLRKKFPTMKRPYKVPLGFFGLILMCFVPSVLLVYVMTVATKIVYVASAFLTFLGIVLYYFMNLCKSKRWIEFRGVSGGPYGEEATVSAAGPLFAILGFIIFPFIWSIPEALLTAELATTFPGNGGFVIWANEAFGPFWGSLMGYWKFFCGVINLASYPILCIDYLKVVIPVLSSGLPRIVSILSQLLLSFLNYSGLAIVGYTAVGLGVISLLPFVLMSLISVPKIDPSRCASTLAGEVEEPHKTFPKALLFAGLLTCLGYIIPLLATTGAMPLDQEVWLVGILHMWLV*