Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014750.01.T01 | XP_024635477.1 | 96.262 | 321 | 11 | 1 | 1 | 321 | 194 | 513 | 0 | 620 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014750.01.T01 | A0A072UXC0 | 96.262 | 321 | 11 | 1 | 1 | 321 | 194 | 513 | 0.0 | 620 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048940.01 | MsG0380014750.01 | 0.831967 | 1.236095e-55 | 1.362639e-52 |
MsG0180000151.01 | MsG0380014750.01 | 0.851087 | 1.115187e-60 | 2.231423e-57 |
MsG0180000491.01 | MsG0380014750.01 | 0.802914 | 4.474825e-49 | 2.218765e-46 |
MsG0180000942.01 | MsG0380014750.01 | 0.825337 | 4.953141e-54 | 4.501834e-51 |
MsG0180005339.01 | MsG0380014750.01 | 0.815915 | 7.237728e-52 | 5.055469e-49 |
MsG0280011362.01 | MsG0380014750.01 | 0.801881 | 7.303521e-49 | 3.527403e-46 |
MsG0380013908.01 | MsG0380014750.01 | 0.805753 | 1.146250e-49 | 6.114038e-47 |
MsG0380014750.01 | MsG0380016527.01 | 0.804426 | 2.172131e-49 | 1.119571e-46 |
MsG0380014750.01 | MsG0380016936.01 | 0.813991 | 1.933989e-51 | 1.282006e-48 |
MsG0380014750.01 | MsG0480018345.01 | 0.896440 | 3.681209e-76 | 3.982475e-72 |
MsG0380014750.01 | MsG0480021999.01 | 0.806772 | 6.994617e-50 | 3.829026e-47 |
MsG0380014750.01 | MsG0480022535.01 | 0.819063 | 1.414059e-52 | 1.076896e-49 |
MsG0380014750.01 | MsG0480022664.01 | 0.837024 | 6.631594e-57 | 8.506270e-54 |
MsG0380014750.01 | MsG0480023044.01 | 0.805472 | 1.313029e-49 | 6.952639e-47 |
MsG0380014750.01 | MsG0480023498.01 | 0.829841 | 4.107235e-55 | 4.254092e-52 |
MsG0380014750.01 | MsG0480023641.01 | 0.816129 | 6.482545e-52 | 4.554769e-49 |
MsG0380014750.01 | MsG0480023740.01 | 0.860088 | 2.635021e-63 | 7.118005e-60 |
MsG0380014750.01 | MsG0580024201.01 | 0.807900 | 4.032213e-50 | 2.272931e-47 |
MsG0380014750.01 | MsG0580024308.01 | 0.826575 | 2.515839e-54 | 2.368533e-51 |
MsG0380014750.01 | MsG0580024471.01 | 0.812929 | 3.310289e-51 | 2.132058e-48 |
MsG0380014750.01 | MsG0580024491.01 | -0.823195 | 1.578358e-53 | 1.349734e-50 |
MsG0380014750.01 | MsG0580024597.01 | 0.837565 | 4.822384e-57 | 6.288800e-54 |
MsG0380014750.01 | MsG0580024598.01 | 0.827147 | 1.836538e-54 | 1.757987e-51 |
MsG0380014750.01 | MsG0580024601.01 | 0.824397 | 8.251868e-54 | 7.300211e-51 |
MsG0380014750.01 | MsG0580025301.01 | 0.808649 | 2.791743e-50 | 1.605010e-47 |
MsG0380014750.01 | MsG0580029433.01 | 0.808238 | 3.416599e-50 | 1.943355e-47 |
MsG0380014750.01 | MsG0580030063.01 | 0.810891 | 9.198208e-51 | 5.612344e-48 |
MsG0380014750.01 | MsG0680031406.01 | 0.803273 | 3.771413e-49 | 1.887185e-46 |
MsG0380014750.01 | MsG0680031996.01 | 0.811671 | 6.231185e-51 | 3.880616e-48 |
MsG0380014750.01 | MsG0680031997.01 | 0.819145 | 1.354585e-52 | 1.033881e-49 |
MsG0380014750.01 | MsG0680032003.01 | 0.800109 | 1.681213e-48 | 7.763038e-46 |
MsG0380014750.01 | MsG0680035664.01 | 0.814947 | 1.188562e-51 | 8.085038e-49 |
MsG0380014750.01 | MsG0680035665.01 | 0.806961 | 6.380078e-50 | 3.509727e-47 |
MsG0380014750.01 | MsG0780039807.01 | 0.850332 | 1.817928e-60 | 3.548608e-57 |
MsG0380014750.01 | MsG0780040794.01 | 0.817097 | 3.935492e-52 | 2.839279e-49 |
MsG0380014750.01 | MsG0780041129.01 | 0.804207 | 2.412862e-49 | 1.236687e-46 |
MsG0380014750.01 | MsG0880042256.01 | 0.811694 | 6.158309e-51 | 3.837678e-48 |
MsG0380014750.01 | MsG0880042288.01 | 0.803357 | 3.622966e-49 | 1.816756e-46 |
MsG0380014750.01 | MsG0880043107.01 | 0.827868 | 1.233212e-54 | 1.205563e-51 |
MsG0380014750.01 | MsG0880044105.01 | 0.837999 | 3.731875e-57 | 4.932241e-54 |
MsG0380014750.01 | MsG0880045190.01 | 0.816447 | 5.505119e-52 | 3.901469e-49 |
MsG0280009757.01 | MsG0380014750.01 | 0.804751 | 1.859043e-49 | 9.663508e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014750.01.T01 | MTR_3g463450 | 96.262 | 321 | 11 | 1 | 1 | 321 | 194 | 513 | 0.0 | 620 |
MsG0380014750.01.T01 | MTR_5g082130 | 49.057 | 159 | 73 | 2 | 166 | 316 | 252 | 410 | 1.35e-44 | 157 |
MsG0380014750.01.T01 | MTR_5g082130 | 55.405 | 74 | 33 | 0 | 1 | 74 | 150 | 223 | 4.65e-20 | 90.5 |
MsG0380014750.01.T01 | MTR_2g103795 | 41.837 | 98 | 57 | 0 | 207 | 304 | 139 | 236 | 5.24e-19 | 85.5 |
MsG0380014750.01.T01 | MTR_7g099260 | 36.283 | 113 | 65 | 1 | 208 | 313 | 238 | 350 | 1.61e-17 | 82.4 |
MsG0380014750.01.T01 | MTR_4g114690 | 40.206 | 97 | 58 | 0 | 207 | 303 | 162 | 258 | 1.81e-17 | 81.6 |
MsG0380014750.01.T01 | MTR_7g098450 | 36.842 | 114 | 64 | 2 | 208 | 313 | 227 | 340 | 5.17e-17 | 80.9 |
MsG0380014750.01.T01 | MTR_7g098450 | 36.842 | 114 | 64 | 2 | 208 | 313 | 250 | 363 | 6.35e-17 | 80.9 |
MsG0380014750.01.T01 | MTR_4g010250 | 35.577 | 104 | 67 | 0 | 206 | 309 | 123 | 226 | 1.41e-16 | 78.6 |
MsG0380014750.01.T01 | MTR_5g029910 | 37.634 | 93 | 58 | 0 | 211 | 303 | 126 | 218 | 3.28e-15 | 74.7 |
MsG0380014750.01.T01 | MTR_1g073230 | 27.922 | 154 | 103 | 1 | 165 | 310 | 223 | 376 | 1.52e-14 | 73.9 |
MsG0380014750.01.T01 | MTR_2g103795 | 40.000 | 85 | 51 | 0 | 207 | 291 | 139 | 223 | 1.57e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014750.01.T01 | AT1G07280 | 59.459 | 333 | 121 | 3 | 1 | 320 | 217 | 548 | 2.70e-134 | 393 |
MsG0380014750.01.T01 | AT1G07280 | 59.459 | 333 | 121 | 3 | 1 | 320 | 217 | 548 | 2.70e-134 | 393 |
MsG0380014750.01.T01 | AT1G07280 | 59.459 | 333 | 121 | 3 | 1 | 320 | 217 | 548 | 2.70e-134 | 393 |
MsG0380014750.01.T01 | AT2G29670 | 58.944 | 341 | 119 | 6 | 1 | 320 | 193 | 533 | 1.06e-125 | 370 |
MsG0380014750.01.T01 | AT2G29670 | 58.944 | 341 | 119 | 6 | 1 | 320 | 193 | 533 | 1.06e-125 | 370 |
MsG0380014750.01.T01 | AT3G47080 | 50.774 | 323 | 123 | 7 | 1 | 321 | 226 | 514 | 1.27e-100 | 305 |
MsG0380014750.01.T01 | AT1G07280 | 55.469 | 256 | 100 | 3 | 1 | 243 | 217 | 471 | 3.69e-84 | 262 |
MsG0380014750.01.T01 | AT4G17940 | 39.785 | 93 | 56 | 0 | 211 | 303 | 154 | 246 | 4.26e-17 | 80.1 |
MsG0380014750.01.T01 | AT5G20190 | 38.776 | 98 | 60 | 0 | 207 | 304 | 156 | 253 | 4.28e-17 | 80.5 |
MsG0380014750.01.T01 | AT1G80130 | 35.052 | 97 | 63 | 0 | 207 | 303 | 165 | 261 | 2.05e-11 | 64.3 |
MsG0380014750.01.T01 | AT4G32340 | 35.789 | 95 | 60 | 1 | 211 | 304 | 114 | 208 | 2.57e-11 | 63.2 |
Find 103 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACGAATTTGTTTCGTGATT+TGG | 0.185372 | 3:+59368099 | None:intergenic |
AACTAAAACAAGATCAAAAT+TGG | 0.191920 | 3:-59365405 | MsG0380014750.01.T01:three_prime_UTR |
TTCACATACACCAACGTTAA+TGG | 0.200607 | 3:-59367475 | MsG0380014750.01.T01:CDS |
AAACAATGCAATTATGGATT+TGG | 0.264253 | 3:-59367867 | MsG0380014750.01.T01:five_prime_UTR |
TAACGAAAACAATGCAATTA+TGG | 0.267841 | 3:-59367873 | MsG0380014750.01.T01:five_prime_UTR |
TCTTCAGAGGTCTCGATCTT+TGG | 0.284883 | 3:-59368032 | MsG0380014750.01.T01:five_prime_UTR |
TCTTGTTCTTCCGGTTCTTC+TGG | 0.286031 | 3:-59367815 | MsG0380014750.01.T01:five_prime_UTR |
ATAAATACGCAACCTTCTTA+TGG | 0.292547 | 3:-59365610 | MsG0380014750.01.T01:CDS |
TCTTCTTCCTCTTCTTGTAT+TGG | 0.302233 | 3:+59367994 | None:intergenic |
GGCCGCAGAAGAGACTTATT+TGG | 0.312086 | 3:-59365567 | MsG0380014750.01.T01:CDS |
ACTTCCTCTTCTTGTTCTTC+CGG | 0.317190 | 3:-59367824 | MsG0380014750.01.T01:five_prime_UTR |
ACAGAACTTGTTTATCAAAC+AGG | 0.327067 | 3:-59366997 | MsG0380014750.01.T01:CDS |
AGCATAATTTGCAGCATAAT+AGG | 0.327559 | 3:+59365517 | None:intergenic |
AAGAAGAAGAAACTAAGATA+TGG | 0.341917 | 3:-59367140 | MsG0380014750.01.T01:CDS |
AACTAAGATATGGGAATCTA+TGG | 0.346469 | 3:-59367130 | MsG0380014750.01.T01:CDS |
TTATTATAAGCTTCAGCATC+TGG | 0.373541 | 3:+59365629 | None:intergenic |
TTTCCAATGGGGATGGGTTG+AGG | 0.377728 | 3:-59365294 | MsG0380014750.01.T01:three_prime_UTR |
GCAAGTAACAAAGCATTGTT+TGG | 0.387537 | 3:+59366961 | None:intergenic |
AGTAATACTGCCTCGGTTGA+TGG | 0.395286 | 3:-59367276 | MsG0380014750.01.T01:CDS |
CGTTGTTACTTGACATAGAA+TGG | 0.397116 | 3:+59367418 | None:intergenic |
TCTTCCTCTTCTTGTATTGG+TGG | 0.400469 | 3:+59367997 | None:intergenic |
TTGTTTCGTGATTTGGATGA+TGG | 0.417401 | 3:+59368106 | None:intergenic |
CTCCGGTGGCTCAAAATTAA+CGG | 0.427707 | 3:+59367784 | None:intergenic |
CTTCTTGTATTGGTGGAAAG+TGG | 0.431042 | 3:+59368004 | None:intergenic |
TTTGACGGGGATGGACGAAC+GGG | 0.434895 | 3:-59367210 | MsG0380014750.01.T01:CDS |
AATGAAACAATTTGTTTCAC+CGG | 0.442034 | 3:-59367064 | MsG0380014750.01.T01:CDS |
AAATATAAACCGGTGGGGAG+TGG | 0.442813 | 3:-59367234 | MsG0380014750.01.T01:CDS |
AGACCTCTGAAGAACAAAAC+TGG | 0.448851 | 3:+59368042 | None:intergenic |
GGCATGAGAACCAGAAGAAC+CGG | 0.459143 | 3:+59367805 | None:intergenic |
TTCTTGTATTGGTGGAAAGT+GGG | 0.467059 | 3:+59368005 | None:intergenic |
GATTCTTGAAAGAGTGCAAA+AGG | 0.467494 | 3:-59367538 | MsG0380014750.01.T01:CDS |
TTTAAAGAAACTTACTCAAA+CGG | 0.471650 | 3:+59368583 | None:intergenic |
GAGGAAGAAGAACAATAAGA+AGG | 0.486358 | 3:-59367982 | MsG0380014750.01.T01:five_prime_UTR |
GATTCAATCTTAGCAGAAAC+CGG | 0.488724 | 3:+59367045 | None:intergenic |
ACTAAAACAAGATCAAAATT+GGG | 0.489177 | 3:-59365404 | MsG0380014750.01.T01:three_prime_UTR |
TTTATGATTCTCAATGAAAA+CGG | 0.489931 | 3:+59367716 | None:intergenic |
GAAGAAGAATTCAGAGATGT+TGG | 0.491273 | 3:-59367678 | MsG0380014750.01.T01:five_prime_UTR |
TCCTCCGTCGTCAAACTCAC+CGG | 0.496712 | 3:-59368656 | MsG0380014750.01.T01:five_prime_UTR |
GCCTCGGTTGATGGAGGAAG+TGG | 0.496999 | 3:-59367267 | MsG0380014750.01.T01:CDS |
GGGAGTGGATTTGACGGGGA+TGG | 0.504157 | 3:-59367219 | MsG0380014750.01.T01:CDS |
AGAAGAAGAAACTAAGATAT+GGG | 0.504906 | 3:-59367139 | MsG0380014750.01.T01:CDS |
ATTTGACGGGGATGGACGAA+CGG | 0.508427 | 3:-59367211 | MsG0380014750.01.T01:CDS |
TCTTGAGAAGAATCAGATAG+AGG | 0.509178 | 3:+59365455 | None:intergenic |
TTATAGAAACGAAGAGGGAT+TGG | 0.510770 | 3:-59367097 | MsG0380014750.01.T01:CDS |
CGCAGAAGAGACTTATTTGG+AGG | 0.512178 | 3:-59365564 | MsG0380014750.01.T01:CDS |
GCAGCATAATAGGTGTTGCT+AGG | 0.514052 | 3:+59365527 | None:intergenic |
TTTAGCTGCGGTTGCAACCC+CGG | 0.514830 | 3:-59367394 | MsG0380014750.01.T01:CDS |
TCGTTGCACATGAATTTGAC+AGG | 0.520886 | 3:-59366915 | MsG0380014750.01.T01:intron |
CCGGTGGGGAGTGGATTTGA+CGG | 0.530493 | 3:-59367225 | MsG0380014750.01.T01:CDS |
AGTATTACTTCCACTCGAAA+CGG | 0.537786 | 3:+59367290 | None:intergenic |
CGGCGGCGGAGAGATTATTC+CGG | 0.541801 | 3:+59368637 | None:intergenic |
TCACCTCAACCCATCCCCAT+TGG | 0.542243 | 3:+59365291 | None:intergenic |
ATTGGGAGGGAAATATATAG+AGG | 0.549680 | 3:-59365387 | MsG0380014750.01.T01:three_prime_UTR |
CAGAACTTGTTTATCAAACA+GGG | 0.550923 | 3:-59366996 | MsG0380014750.01.T01:CDS |
CCGCGGTGGGAAATATAAAC+CGG | 0.553139 | 3:-59367244 | MsG0380014750.01.T01:CDS |
GAAACTTACTCAAACGGTGG+TGG | 0.555885 | 3:+59368589 | None:intergenic |
GATGGAGGAAGTGGCCGCGG+TGG | 0.560003 | 3:-59367258 | MsG0380014750.01.T01:CDS |
CAAATCACGAAACAAATTCG+TGG | 0.561853 | 3:-59368098 | MsG0380014750.01.T01:five_prime_UTR |
CTTTCCACCAATACAAGAAG+AGG | 0.562841 | 3:-59368001 | MsG0380014750.01.T01:five_prime_UTR |
ATGGAGGAAGTGGCCGCGGT+GGG | 0.564800 | 3:-59367257 | MsG0380014750.01.T01:CDS |
ATGGGAATCTATGGTTGAAG+AGG | 0.565563 | 3:-59367121 | MsG0380014750.01.T01:CDS |
CTTCAAGAGAGCTATAGAAG+TGG | 0.567749 | 3:-59365657 | MsG0380014750.01.T01:CDS |
AGGAAGAAGAACAATAAGAA+GGG | 0.569239 | 3:-59367981 | MsG0380014750.01.T01:five_prime_UTR |
GTTGATGGAGGAAGTGGCCG+CGG | 0.570618 | 3:-59367261 | MsG0380014750.01.T01:CDS |
CGATCGAAGAAGTCTCCACC+GGG | 0.571840 | 3:+59367376 | None:intergenic |
AGAACCGGAAGAACAAGAAG+AGG | 0.572363 | 3:+59367820 | None:intergenic |
GAGTGGAAGTAATACTGCCT+CGG | 0.577752 | 3:-59367283 | MsG0380014750.01.T01:CDS |
TCCGGTGAGTTTGACGACGG+AGG | 0.580178 | 3:+59368655 | None:intergenic |
CGGTGGGGAGTGGATTTGAC+GGG | 0.580234 | 3:-59367224 | MsG0380014750.01.T01:CDS |
TTATAAGCTTCAGCATCTGG+TGG | 0.586028 | 3:+59365632 | None:intergenic |
TTTCACTTTACAAATGAGAG+AGG | 0.591681 | 3:-59367586 | MsG0380014750.01.T01:CDS |
CCGTCAAATCCACTCCCCAC+CGG | 0.599440 | 3:+59367225 | None:intergenic |
ACGATCGAAGAAGTCTCCAC+CGG | 0.601465 | 3:+59367375 | None:intergenic |
GGTGGATCGAAACAAATTCG+TGG | 0.602746 | 3:+59368063 | None:intergenic |
AAAGAAACTTACTCAAACGG+TGG | 0.605610 | 3:+59368586 | None:intergenic |
AAATCACGAAACAAATTCGT+GGG | 0.608197 | 3:-59368097 | MsG0380014750.01.T01:five_prime_UTR |
AAAACAAGATCAAAATTGGG+AGG | 0.613359 | 3:-59365401 | MsG0380014750.01.T01:three_prime_UTR |
AAAACATTCTCCGTTTCGAG+TGG | 0.617119 | 3:-59367300 | MsG0380014750.01.T01:CDS |
GAGGCTTATAGAAACGAAGA+GGG | 0.619193 | 3:-59367102 | MsG0380014750.01.T01:CDS |
TCTATGGAATACTGGTGGAG+AGG | 0.619309 | 3:-59365489 | MsG0380014750.01.T01:CDS |
GCTAGTGTTTGTGATGAAGA+TGG | 0.620714 | 3:+59368145 | None:intergenic |
GTGGATCGAAACAAATTCGT+GGG | 0.620906 | 3:+59368064 | None:intergenic |
CGGTGGGAAATATAAACCGG+TGG | 0.621319 | 3:-59367241 | MsG0380014750.01.T01:CDS |
AAACAAGATCAAAATTGGGA+GGG | 0.624576 | 3:-59365400 | MsG0380014750.01.T01:three_prime_UTR |
GGTGGGAAATATAAACCGGT+GGG | 0.628312 | 3:-59367240 | MsG0380014750.01.T01:CDS |
ATTATCGCTGGTATAAACTC+CGG | 0.629792 | 3:+59367767 | None:intergenic |
AGAGGCTTATAGAAACGAAG+AGG | 0.630772 | 3:-59367103 | MsG0380014750.01.T01:CDS |
ATCGCTGGTATAAACTCCGG+TGG | 0.635655 | 3:+59367770 | None:intergenic |
CCTCTGAAGAACAAAACTGG+TGG | 0.635757 | 3:+59368045 | None:intergenic |
AAGTAACAACGCTTTAGCTG+CGG | 0.636246 | 3:-59367406 | MsG0380014750.01.T01:CDS |
AATACTGCCTCGGTTGATGG+AGG | 0.639281 | 3:-59367273 | MsG0380014750.01.T01:CDS |
GCCACTTCCTCCATCAACCG+AGG | 0.643564 | 3:+59367266 | None:intergenic |
AGCTGCGGTTGCAACCCCGG+TGG | 0.647798 | 3:-59367391 | MsG0380014750.01.T01:CDS |
GTGATGTAATATCACGGCGG+CGG | 0.648856 | 3:+59368623 | None:intergenic |
ATAACATAAACCATTAACGT+TGG | 0.667251 | 3:+59367465 | None:intergenic |
TGAACGAAAAGCGAACAGCG+TGG | 0.685411 | 3:-59367744 | MsG0380014750.01.T01:five_prime_UTR |
CTCCAAATAAGTCTCTTCTG+CGG | 0.688717 | 3:+59365565 | None:intergenic |
TATTCCGGTGAGTTTGACGA+CGG | 0.700296 | 3:+59368652 | None:intergenic |
CCGGTTTATATTTCCCACCG+CGG | 0.731142 | 3:+59367244 | None:intergenic |
GTGGGAAATATAAACCGGTG+GGG | 0.746911 | 3:-59367239 | MsG0380014750.01.T01:CDS |
GGTGGGGAGTGGATTTGACG+GGG | 0.753129 | 3:-59367223 | MsG0380014750.01.T01:CDS |
TTGGTGATGTAATATCACGG+CGG | 0.808487 | 3:+59368620 | None:intergenic |
GATCGAAGAAGTCTCCACCG+GGG | 0.831475 | 3:+59367377 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAAATTTTTTTTTTCCAAT+GGG | - | Chr3:59368535-59368554 | MsG0380014750.01.T01:intron | 10.0% |
!!! | TTTAAATTTTTTTTTTCCAA+TGG | - | Chr3:59368534-59368553 | MsG0380014750.01.T01:intron | 10.0% |
!! | TGAAAAAGAAAAAACATTAT+GGG | - | Chr3:59365630-59365649 | MsG0380014750.01.T01:CDS | 15.0% |
!! | TTGAAAAAGAAAAAACATTA+TGG | - | Chr3:59365629-59365648 | MsG0380014750.01.T01:CDS | 15.0% |
!!! | ATGAAACTTTTTTTACAAAT+TGG | + | Chr3:59365564-59365583 | None:intergenic | 15.0% |
!!! | TAAATTTTTTTTTTCCAATG+GGG | - | Chr3:59368536-59368555 | MsG0380014750.01.T01:intron | 15.0% |
!!! | TGTTTTTTCTTTTTCAATTA+AGG | + | Chr3:59365626-59365645 | None:intergenic | 15.0% |
!!! | TTATTTATTTTTGTTTTTGC+AGG | - | Chr3:59365486-59365505 | MsG0380014750.01.T01:CDS | 15.0% |
!!! | TTTTTACAAATTGGAAAAAT+TGG | + | Chr3:59365555-59365574 | None:intergenic | 15.0% |
!!! | TTTTTCTCTTATAATAGTAT+TGG | + | Chr3:59367383-59367402 | None:intergenic | 15.0% |
!!! | TTTTTTCCTTATAATAGTAT+TGG | + | Chr3:59367416-59367435 | None:intergenic | 15.0% |
!! | AAATCACCAATACTATTATA+AGG | - | Chr3:59367407-59367426 | MsG0380014750.01.T01:CDS | 20.0% |
!! | AACTAAAACAAGATCAAAAT+TGG | - | Chr3:59368436-59368455 | MsG0380014750.01.T01:intron | 20.0% |
!! | AATTGAAAAATAGATGCTAT+TGG | - | Chr3:59367251-59367270 | MsG0380014750.01.T01:CDS | 20.0% |
!! | ACTAAAACAAGATCAAAATT+GGG | - | Chr3:59368437-59368456 | MsG0380014750.01.T01:intron | 20.0% |
!! | AGCATACTATTGAAATATAT+AGG | - | Chr3:59367208-59367227 | MsG0380014750.01.T01:CDS | 20.0% |
!! | ATGAATGAATTAACTTTACA+TGG | - | Chr3:59367576-59367595 | MsG0380014750.01.T01:CDS | 20.0% |
!! | ATTGAAAAATAGATGCTATT+GGG | - | Chr3:59367252-59367271 | MsG0380014750.01.T01:CDS | 20.0% |
!! | TAAAAATTGAAAAGATGCTA+TGG | + | Chr3:59366962-59366981 | None:intergenic | 20.0% |
!! | TTTAAAGAAACTTACTCAAA+CGG | + | Chr3:59365261-59365280 | None:intergenic | 20.0% |
!! | TTTACAAAAGCCATAAAATT+CGG | + | Chr3:59365409-59365428 | None:intergenic | 20.0% |
!! | TTTATGATTCTCAATGAAAA+CGG | + | Chr3:59366128-59366147 | None:intergenic | 20.0% |
!!! | AGATTTATTATGCTATTTTG+AGG | - | Chr3:59367795-59367814 | MsG0380014750.01.T01:five_prime_UTR | 20.0% |
!!! | AGTGAATCTTTTTGATTTTA+TGG | - | Chr3:59368648-59368667 | MsG0380014750.01.T01:five_prime_UTR | 20.0% |
!!! | AGTTGTATAATTGACAATTT+TGG | - | Chr3:59368128-59368147 | MsG0380014750.01.T01:five_prime_UTR | 20.0% |
!!! | ATCTGATTTTATTCCATAAT+TGG | + | Chr3:59367779-59367798 | None:intergenic | 20.0% |
!!! | CTTGTTTTAGTTGATTATTA+TGG | + | Chr3:59368428-59368447 | None:intergenic | 20.0% |
!!! | TTTTGTATGAAGATTTACAA+GGG | - | Chr3:59366281-59366300 | MsG0380014750.01.T01:intron | 20.0% |
!!! | TTTTTTCCTTCTTCTATTTT+TGG | + | Chr3:59367830-59367849 | None:intergenic | 20.0% |
! | AAACAATGCAATTATGGATT+TGG | - | Chr3:59365974-59365993 | MsG0380014750.01.T01:intron | 25.0% |
! | AAGAAGAAGAAACTAAGATA+TGG | - | Chr3:59366701-59366720 | MsG0380014750.01.T01:intron | 25.0% |
! | AGAAGAAGAAACTAAGATAT+GGG | - | Chr3:59366702-59366721 | MsG0380014750.01.T01:intron | 25.0% |
! | ATAACATAAACCATTAACGT+TGG | + | Chr3:59366379-59366398 | None:intergenic | 25.0% |
! | ATCTAACCAAAAATAGAAGA+AGG | - | Chr3:59367821-59367840 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
! | TAAACACACTTTAATTCTCT+TGG | - | Chr3:59365352-59365371 | MsG0380014750.01.T01:three_prime_UTR | 25.0% |
! | TAACGAAAACAATGCAATTA+TGG | - | Chr3:59365968-59365987 | MsG0380014750.01.T01:intron | 25.0% |
! | TCTTGATGAATATTGAAAGA+GGG | - | Chr3:59367866-59367885 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
! | TGTTGTTATAATCCTATTGT+TGG | - | Chr3:59367181-59367200 | MsG0380014750.01.T01:CDS | 25.0% |
!! | AATGAAACAATTTGTTTCAC+CGG | - | Chr3:59366777-59366796 | MsG0380014750.01.T01:intron | 25.0% |
!! | AATGGTGGTGTTTATAAAAA+CGG | - | Chr3:59366661-59366680 | MsG0380014750.01.T01:intron | 25.0% |
!! | ATTTTTCACTTTCCATAAGA+AGG | + | Chr3:59368246-59368265 | None:intergenic | 25.0% |
!! | CAAATTATGCTCATTTTCTA+TGG | - | Chr3:59368336-59368355 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
!! | CTCTTATAATAGTATTGGAA+GGG | + | Chr3:59367378-59367397 | None:intergenic | 25.0% |
!! | CTTTTGTATGAAGATTTACA+AGG | - | Chr3:59366280-59366299 | MsG0380014750.01.T01:intron | 25.0% |
!! | GAAAGTGAAAAATGATTTGT+GGG | - | Chr3:59368253-59368272 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
!! | TCTCTTATAATAGTATTGGA+AGG | + | Chr3:59367379-59367398 | None:intergenic | 25.0% |
!! | TGTATGCTTTTGAATATTCA+GGG | - | Chr3:59368151-59368170 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
!! | TTTGTGGTTTTTGTTCAAAA+GGG | - | Chr3:59365524-59365543 | MsG0380014750.01.T01:CDS | 25.0% |
!! | TTTTGTGGTTTTTGTTCAAA+AGG | - | Chr3:59365523-59365542 | MsG0380014750.01.T01:CDS | 25.0% |
!!! | AATTTGCATTGGAGATTTTT+TGG | - | Chr3:59367742-59367761 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
!!! | TAGTTTGTATTTTAAGCTAC+CGG | - | Chr3:59367701-59367720 | MsG0380014750.01.T01:five_prime_UTR | 25.0% |
!!! | TTTTGTTTTTGCAGGTTAAA+AGG | - | Chr3:59365494-59365513 | MsG0380014750.01.T01:CDS | 25.0% |
!!! | TTTTTGGTGATGTAATATCA+CGG | + | Chr3:59365227-59365246 | None:intergenic | 25.0% |
AAAAAACATTATGGGACTTG+AGG | - | Chr3:59365638-59365657 | MsG0380014750.01.T01:CDS | 30.0% | |
AAAACAAGATCAAAATTGGG+AGG | - | Chr3:59368440-59368459 | MsG0380014750.01.T01:intron | 30.0% | |
AAACAAGATCAAAATTGGGA+GGG | - | Chr3:59368441-59368460 | MsG0380014750.01.T01:intron | 30.0% | |
AAATCACGAAACAAATTCGT+GGG | - | Chr3:59365744-59365763 | MsG0380014750.01.T01:intron | 30.0% | |
AACTAAGATATGGGAATCTA+TGG | - | Chr3:59366711-59366730 | MsG0380014750.01.T01:intron | 30.0% | |
AGGAAGAAGAACAATAAGAA+GGG | - | Chr3:59365860-59365879 | MsG0380014750.01.T01:intron | 30.0% | |
ATAAATACGCAACCTTCTTA+TGG | - | Chr3:59368231-59368250 | MsG0380014750.01.T01:five_prime_UTR | 30.0% | |
ATCTAGTCAATCTTATAGAC+CGG | + | Chr3:59367493-59367512 | None:intergenic | 30.0% | |
ATGCACTAAACAATTTGCAT+TGG | - | Chr3:59367731-59367750 | MsG0380014750.01.T01:five_prime_UTR | 30.0% | |
CTTATGAAAAATCATGTGCT+TGG | + | Chr3:59368029-59368048 | None:intergenic | 30.0% | |
CTTGATGAATATTGAAAGAG+GGG | - | Chr3:59367867-59367886 | MsG0380014750.01.T01:five_prime_UTR | 30.0% | |
GATTGAAGAAGAAAAATCTG+AGG | + | Chr3:59365595-59365614 | None:intergenic | 30.0% | |
GGAAAGTGAAAAATGATTTG+TGG | - | Chr3:59368252-59368271 | MsG0380014750.01.T01:five_prime_UTR | 30.0% | |
GTCTTGATGAATATTGAAAG+AGG | - | Chr3:59367865-59367884 | MsG0380014750.01.T01:five_prime_UTR | 30.0% | |
GTTATAATCCTATTGTTGGT+TGG | - | Chr3:59367185-59367204 | MsG0380014750.01.T01:CDS | 30.0% | |
TAGATTCATACTGATGTATC+CGG | - | Chr3:59367471-59367490 | MsG0380014750.01.T01:CDS | 30.0% | |
TTATTATAAGCTTCAGCATC+TGG | + | Chr3:59368215-59368234 | None:intergenic | 30.0% | |
TTTCACTTTACAAATGAGAG+AGG | - | Chr3:59366255-59366274 | MsG0380014750.01.T01:intron | 30.0% | |
! | ACAGAACTTGTTTATCAAAC+AGG | - | Chr3:59366844-59366863 | MsG0380014750.01.T01:intron | 30.0% |
! | AGCATAATTTGCAGCATAAT+AGG | + | Chr3:59368327-59368346 | None:intergenic | 30.0% |
! | ATGGTGGTGTTTATAAAAAC+GGG | - | Chr3:59366662-59366681 | MsG0380014750.01.T01:intron | 30.0% |
! | CAAGCACATGATTTTTCATA+AGG | - | Chr3:59368027-59368046 | MsG0380014750.01.T01:five_prime_UTR | 30.0% |
! | CAGAACTTGTTTATCAAACA+GGG | - | Chr3:59366845-59366864 | MsG0380014750.01.T01:intron | 30.0% |
! | CATTGTTTTCGTTAGAGATT+TGG | + | Chr3:59365962-59365981 | None:intergenic | 30.0% |
! | GGAGTTAAGTTTTCCAATTA+TGG | - | Chr3:59367763-59367782 | MsG0380014750.01.T01:five_prime_UTR | 30.0% |
! | GTGTATGCTTTTGAATATTC+AGG | - | Chr3:59368150-59368169 | MsG0380014750.01.T01:five_prime_UTR | 30.0% |
! | GTTAAAAGGAAGACTTTTTG+TGG | - | Chr3:59365508-59365527 | MsG0380014750.01.T01:CDS | 30.0% |
! | GTTATACGATCCGAATTTTA+TGG | - | Chr3:59365396-59365415 | MsG0380014750.01.T01:three_prime_UTR | 30.0% |
! | TTCATTTTACCTCCCAATTT+TGG | - | Chr3:59367020-59367039 | MsG0380014750.01.T01:CDS | 30.0% |
!! | GAAGAAAGCTTTTTCTTCTA+TGG | - | Chr3:59366207-59366226 | MsG0380014750.01.T01:intron | 30.0% |
!!! | ATATTTTCTTTTGAGACACG+AGG | + | Chr3:59367968-59367987 | None:intergenic | 30.0% |
!!! | TATTTTCTTTTGAGACACGA+GGG | + | Chr3:59367967-59367986 | None:intergenic | 30.0% |
!!! | TTTTTTTTTCCAATGGGGAT+GGG | - | Chr3:59368541-59368560 | MsG0380014750.01.T01:intron | 30.0% |
!!! | TTTTTTTTTTCCAATGGGGA+TGG | - | Chr3:59368540-59368559 | MsG0380014750.01.T01:intron | 30.0% |
AAAGAAACTTACTCAAACGG+TGG | + | Chr3:59365258-59365277 | None:intergenic | 35.0% | |
AATATTGAAAGAGGGGTTTG+CGG | - | Chr3:59367874-59367893 | MsG0380014750.01.T01:five_prime_UTR | 35.0% | |
ACCAATGAAGCTACCAAAAT+TGG | + | Chr3:59367036-59367055 | None:intergenic | 35.0% | |
AGTATTACTTCCACTCGAAA+CGG | + | Chr3:59366554-59366573 | None:intergenic | 35.0% | |
ATTATCGCTGGTATAAACTC+CGG | + | Chr3:59366077-59366096 | None:intergenic | 35.0% | |
ATTGGGAGGGAAATATATAG+AGG | - | Chr3:59368454-59368473 | MsG0380014750.01.T01:intron | 35.0% | |
CAAATCACGAAACAAATTCG+TGG | - | Chr3:59365743-59365762 | MsG0380014750.01.T01:intron | 35.0% | |
CCAATGAAGCTACCAAAATT+GGG | + | Chr3:59367035-59367054 | None:intergenic | 35.0% | |
GAAGAAGAATTCAGAGATGT+TGG | - | Chr3:59366163-59366182 | MsG0380014750.01.T01:intron | 35.0% | |
GAGGAAGAAGAACAATAAGA+AGG | - | Chr3:59365859-59365878 | MsG0380014750.01.T01:intron | 35.0% | |
GATTCAATCTTAGCAGAAAC+CGG | + | Chr3:59366799-59366818 | None:intergenic | 35.0% | |
TCTTCTTCCTCTTCTTGTAT+TGG | + | Chr3:59365850-59365869 | None:intergenic | 35.0% | |
TCTTGAGAAGAATCAGATAG+AGG | + | Chr3:59368389-59368408 | None:intergenic | 35.0% | |
TGTTTAGTGCATCTAGAAAC+CGG | + | Chr3:59367723-59367742 | None:intergenic | 35.0% | |
TTATAAAAACGGGGAAACTG+AGG | - | Chr3:59366672-59366691 | MsG0380014750.01.T01:intron | 35.0% | |
TTATAGAAACGAAGAGGGAT+TGG | - | Chr3:59366744-59366763 | MsG0380014750.01.T01:intron | 35.0% | |
TTCACATACACCAACGTTAA+TGG | - | Chr3:59366366-59366385 | MsG0380014750.01.T01:intron | 35.0% | |
! | AAATGCACGCTTCTTTTGTT+TGG | - | Chr3:59366326-59366345 | MsG0380014750.01.T01:intron | 35.0% |
! | CACGAATTTGTTTCGTGATT+TGG | + | Chr3:59365745-59365764 | None:intergenic | 35.0% |
! | CATTTTCTATGGAATACTGG+TGG | - | Chr3:59368347-59368366 | MsG0380014750.01.T01:intron | 35.0% |
! | CGTTGTTACTTGACATAGAA+TGG | + | Chr3:59366426-59366445 | None:intergenic | 35.0% |
! | GATTCTTGAAAGAGTGCAAA+AGG | - | Chr3:59366303-59366322 | MsG0380014750.01.T01:intron | 35.0% |
! | GCTCATTTTCTATGGAATAC+TGG | - | Chr3:59368344-59368363 | MsG0380014750.01.T01:intron | 35.0% |
! | TGGTGGTGTTTATAAAAACG+GGG | - | Chr3:59366663-59366682 | MsG0380014750.01.T01:intron | 35.0% |
! | TTCTTGTATTGGTGGAAAGT+GGG | + | Chr3:59365839-59365858 | None:intergenic | 35.0% |
! | TTGTTTCGTGATTTGGATGA+TGG | + | Chr3:59365738-59365757 | None:intergenic | 35.0% |
!! | GCAAGTAACAAAGCATTGTT+TGG | + | Chr3:59366883-59366902 | None:intergenic | 35.0% |
AAAACATTCTCCGTTTCGAG+TGG | - | Chr3:59366541-59366560 | MsG0380014750.01.T01:intron | 40.0% | |
AAGTAACAACGCTTTAGCTG+CGG | - | Chr3:59366435-59366454 | MsG0380014750.01.T01:intron | 40.0% | |
ACTTCCTCTTCTTGTTCTTC+CGG | - | Chr3:59366017-59366036 | MsG0380014750.01.T01:intron | 40.0% | |
AGAGGCTTATAGAAACGAAG+AGG | - | Chr3:59366738-59366757 | MsG0380014750.01.T01:intron | 40.0% | |
AGTATGCTCCAACCAACAAT+AGG | + | Chr3:59367196-59367215 | None:intergenic | 40.0% | |
ATGAAGCTACCAAAATTGGG+AGG | + | Chr3:59367032-59367051 | None:intergenic | 40.0% | |
ATGGGAATCTATGGTTGAAG+AGG | - | Chr3:59366720-59366739 | MsG0380014750.01.T01:intron | 40.0% | |
CTCCAAATAAGTCTCTTCTG+CGG | + | Chr3:59368279-59368298 | None:intergenic | 40.0% | |
CTTCAAGAGAGCTATAGAAG+TGG | - | Chr3:59368184-59368203 | MsG0380014750.01.T01:five_prime_UTR | 40.0% | |
CTTTCCACCAATACAAGAAG+AGG | - | Chr3:59365840-59365859 | MsG0380014750.01.T01:intron | 40.0% | |
GAGGCTTATAGAAACGAAGA+GGG | - | Chr3:59366739-59366758 | MsG0380014750.01.T01:intron | 40.0% | |
GCTAGTGTTTGTGATGAAGA+TGG | + | Chr3:59365699-59365718 | None:intergenic | 40.0% | |
GGAGGAGAAGTAAATAAGTC+TGG | + | Chr3:59367936-59367955 | None:intergenic | 40.0% | |
GTGGATCGAAACAAATTCGT+GGG | + | Chr3:59365780-59365799 | None:intergenic | 40.0% | |
TCGTTGCACATGAATTTGAC+AGG | - | Chr3:59366926-59366945 | MsG0380014750.01.T01:CDS | 40.0% | |
TCTTCCTCTTCTTGTATTGG+TGG | + | Chr3:59365847-59365866 | None:intergenic | 40.0% | |
TGTTTGTCACTCGTCTAAGA+CGG | + | Chr3:59365306-59365325 | None:intergenic | 40.0% | |
TTATAAGCTTCAGCATCTGG+TGG | + | Chr3:59368212-59368231 | None:intergenic | 40.0% | |
! | AGACCTCTGAAGAACAAAAC+TGG | + | Chr3:59365802-59365821 | None:intergenic | 40.0% |
! | ATAAGTCTGGCTCATGAATC+AGG | + | Chr3:59367923-59367942 | None:intergenic | 40.0% |
! | CTTCTTGTATTGGTGGAAAG+TGG | + | Chr3:59365840-59365859 | None:intergenic | 40.0% |
! | GCTTTTCGTTCAATTATCGC+TGG | + | Chr3:59366089-59366108 | None:intergenic | 40.0% |
!! | CCCAATTTTGGTAGCTTCAT+TGG | - | Chr3:59367032-59367051 | MsG0380014750.01.T01:CDS | 40.0% |
!! | TTGGTGATGTAATATCACGG+CGG | + | Chr3:59365224-59365243 | None:intergenic | 40.0% |
!!! | AACGGTGGTGGAAATGTTTT+TGG | + | Chr3:59365243-59365262 | None:intergenic | 40.0% |
AAATATAAACCGGTGGGGAG+TGG | - | Chr3:59366607-59366626 | MsG0380014750.01.T01:intron | 45.0% | |
AGAACCGGAAGAACAAGAAG+AGG | + | Chr3:59366024-59366043 | None:intergenic | 45.0% | |
AGTAATACTGCCTCGGTTGA+TGG | - | Chr3:59366565-59366584 | MsG0380014750.01.T01:intron | 45.0% | |
ATGTGCTTGGTACGACTGAA+AGG | + | Chr3:59368016-59368035 | None:intergenic | 45.0% | |
CGCAGAAGAGACTTATTTGG+AGG | - | Chr3:59368277-59368296 | MsG0380014750.01.T01:five_prime_UTR | 45.0% | |
CTCCGGTGGCTCAAAATTAA+CGG | + | Chr3:59366060-59366079 | None:intergenic | 45.0% | |
GAAACTTACTCAAACGGTGG+TGG | + | Chr3:59365255-59365274 | None:intergenic | 45.0% | |
GAGTGGAAGTAATACTGCCT+CGG | - | Chr3:59366558-59366577 | MsG0380014750.01.T01:intron | 45.0% | |
GGATCGTATAACAAAGCTCG+AGG | + | Chr3:59365388-59365407 | None:intergenic | 45.0% | |
GGTGGATCGAAACAAATTCG+TGG | + | Chr3:59365781-59365800 | None:intergenic | 45.0% | |
GGTGGGAAATATAAACCGGT+GGG | - | Chr3:59366601-59366620 | MsG0380014750.01.T01:intron | 45.0% | |
GTGGGAAATATAAACCGGTG+GGG | - | Chr3:59366602-59366621 | MsG0380014750.01.T01:intron | 45.0% | |
TAAAAACGGGGAAACTGAGG+TGG | - | Chr3:59366675-59366694 | MsG0380014750.01.T01:intron | 45.0% | |
TATTCCGGTGAGTTTGACGA+CGG | + | Chr3:59365192-59365211 | None:intergenic | 45.0% | |
TCTATGGAATACTGGTGGAG+AGG | - | Chr3:59368352-59368371 | MsG0380014750.01.T01:intron | 45.0% | |
TCTTCAGAGGTCTCGATCTT+TGG | - | Chr3:59365809-59365828 | MsG0380014750.01.T01:intron | 45.0% | |
TCTTGTTCTTCCGGTTCTTC+TGG | - | Chr3:59366026-59366045 | MsG0380014750.01.T01:intron | 45.0% | |
! | CCTCTGAAGAACAAAACTGG+TGG | + | Chr3:59365799-59365818 | None:intergenic | 45.0% |
! | TGCCGTTAATTTTGAGCCAC+CGG | - | Chr3:59366055-59366074 | MsG0380014750.01.T01:intron | 45.0% |
!! | CGAACGGGTTTTTCTAATGG+TGG | - | Chr3:59366646-59366665 | MsG0380014750.01.T01:intron | 45.0% |
!! | GCAGCATAATAGGTGTTGCT+AGG | + | Chr3:59368317-59368336 | None:intergenic | 45.0% |
!! | GGACGAACGGGTTTTTCTAA+TGG | - | Chr3:59366643-59366662 | MsG0380014750.01.T01:intron | 45.0% |
!!! | CCACCAGTTTTGTTCTTCAG+AGG | - | Chr3:59365796-59365815 | MsG0380014750.01.T01:intron | 45.0% |
!!! | GTCTGTGTGTGAGTTTTAGG+TGG | + | Chr3:59365329-59365348 | None:intergenic | 45.0% |
ACGATCGAAGAAGTCTCCAC+CGG | + | Chr3:59366469-59366488 | None:intergenic | 50.0% | |
ATCGCTGGTATAAACTCCGG+TGG | + | Chr3:59366074-59366093 | None:intergenic | 50.0% | |
ATTTGACGGGGATGGACGAA+CGG | - | Chr3:59366630-59366649 | MsG0380014750.01.T01:intron | 50.0% | |
CCGCGGTGGGAAATATAAAC+CGG | - | Chr3:59366597-59366616 | MsG0380014750.01.T01:intron | 50.0% | |
CCGGTTTATATTTCCCACCG+CGG | + | Chr3:59366600-59366619 | None:intergenic | 50.0% | |
CGGTGGGAAATATAAACCGG+TGG | - | Chr3:59366600-59366619 | MsG0380014750.01.T01:intron | 50.0% | |
GGCATGAGAACCAGAAGAAC+CGG | + | Chr3:59366039-59366058 | None:intergenic | 50.0% | |
GGCCGCAGAAGAGACTTATT+TGG | - | Chr3:59368274-59368293 | MsG0380014750.01.T01:five_prime_UTR | 50.0% | |
GGCTCATGAATCAGGTACAC+TGG | + | Chr3:59367915-59367934 | None:intergenic | 50.0% | |
GTGATGTAATATCACGGCGG+CGG | + | Chr3:59365221-59365240 | None:intergenic | 50.0% | |
TGAACGAAAAGCGAACAGCG+TGG | - | Chr3:59366097-59366116 | MsG0380014750.01.T01:intron | 50.0% | |
! | CGCGTCTGTGTGTGAGTTTT+AGG | + | Chr3:59365332-59365351 | None:intergenic | 50.0% |
!! | AATACTGCCTCGGTTGATGG+AGG | - | Chr3:59366568-59366587 | MsG0380014750.01.T01:intron | 50.0% |
!! | TTTCCAATGGGGATGGGTTG+AGG | - | Chr3:59368547-59368566 | MsG0380014750.01.T01:intron | 50.0% |
CGATCGAAGAAGTCTCCACC+GGG | + | Chr3:59366468-59366487 | None:intergenic | 55.0% | |
GATCGAAGAAGTCTCCACCG+GGG | + | Chr3:59366467-59366486 | None:intergenic | 55.0% | |
TCACCTCAACCCATCCCCAT+TGG | + | Chr3:59368553-59368572 | None:intergenic | 55.0% | |
TCCTCCGTCGTCAAACTCAC+CGG | - | Chr3:59365185-59365204 | MsG0380014750.01.T01:three_prime_UTR | 55.0% | |
TTTAGCTGCGGTTGCAACCC+CGG | - | Chr3:59366447-59366466 | MsG0380014750.01.T01:intron | 55.0% | |
TTTGACGGGGATGGACGAAC+GGG | - | Chr3:59366631-59366650 | MsG0380014750.01.T01:intron | 55.0% | |
CCGTCAAATCCACTCCCCAC+CGG | + | Chr3:59366619-59366638 | None:intergenic | 60.0% | |
CGGCGGCGGAGAGATTATTC+CGG | + | Chr3:59365207-59365226 | None:intergenic | 60.0% | |
GCCACTTCCTCCATCAACCG+AGG | + | Chr3:59366578-59366597 | None:intergenic | 60.0% | |
TCCGGTGAGTTTGACGACGG+AGG | + | Chr3:59365189-59365208 | None:intergenic | 60.0% | |
! | CCGGTGGGGAGTGGATTTGA+CGG | - | Chr3:59366616-59366635 | MsG0380014750.01.T01:intron | 60.0% |
! | CGGTGGGGAGTGGATTTGAC+GGG | - | Chr3:59366617-59366636 | MsG0380014750.01.T01:intron | 60.0% |
! | GGGAGTGGATTTGACGGGGA+TGG | - | Chr3:59366622-59366641 | MsG0380014750.01.T01:intron | 60.0% |
! | GGTGGGGAGTGGATTTGACG+GGG | - | Chr3:59366618-59366637 | MsG0380014750.01.T01:intron | 60.0% |
! | GTTGATGGAGGAAGTGGCCG+CGG | - | Chr3:59366580-59366599 | MsG0380014750.01.T01:intron | 60.0% |
!! | GCCTCGGTTGATGGAGGAAG+TGG | - | Chr3:59366574-59366593 | MsG0380014750.01.T01:intron | 60.0% |
!! | TGAGACACGAGGGCATCACG+TGG | + | Chr3:59367957-59367976 | None:intergenic | 60.0% |
ATGGAGGAAGTGGCCGCGGT+GGG | - | Chr3:59366584-59366603 | MsG0380014750.01.T01:intron | 65.0% | |
!! | GACACGAGGGCATCACGTGG+AGG | + | Chr3:59367954-59367973 | None:intergenic | 65.0% |
AGCTGCGGTTGCAACCCCGG+TGG | - | Chr3:59366450-59366469 | MsG0380014750.01.T01:intron | 70.0% | |
GATGGAGGAAGTGGCCGCGG+TGG | - | Chr3:59366583-59366602 | MsG0380014750.01.T01:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 59365156 | 59368707 | 59365156 | ID=MsG0380014750.01;Name=MsG0380014750.01 |
Chr3 | mRNA | 59365156 | 59368707 | 59365156 | ID=MsG0380014750.01.T01;Parent=MsG0380014750.01;Name=MsG0380014750.01.T01;_AED=0.22;_eAED=0.22;_QI=828|1|1|1|0.5|0.33|3|292|321 |
Chr3 | exon | 59365156 | 59365691 | 59365156 | ID=MsG0380014750.01.T01:exon:11543;Parent=MsG0380014750.01.T01 |
Chr3 | exon | 59366916 | 59368355 | 59366916 | ID=MsG0380014750.01.T01:exon:11542;Parent=MsG0380014750.01.T01 |
Chr3 | exon | 59368598 | 59368707 | 59368598 | ID=MsG0380014750.01.T01:exon:11541;Parent=MsG0380014750.01.T01 |
Chr3 | five_prime_UTR | 59368598 | 59368707 | 59368598 | ID=MsG0380014750.01.T01:five_prime_utr;Parent=MsG0380014750.01.T01 |
Chr3 | five_prime_UTR | 59367638 | 59368355 | 59367638 | ID=MsG0380014750.01.T01:five_prime_utr;Parent=MsG0380014750.01.T01 |
Chr3 | CDS | 59366916 | 59367637 | 59366916 | ID=MsG0380014750.01.T01:cds;Parent=MsG0380014750.01.T01 |
Chr3 | CDS | 59365448 | 59365691 | 59365448 | ID=MsG0380014750.01.T01:cds;Parent=MsG0380014750.01.T01 |
Chr3 | three_prime_UTR | 59365156 | 59365447 | 59365156 | ID=MsG0380014750.01.T01:three_prime_utr;Parent=MsG0380014750.01.T01 |
Gene Sequence |
Protein sequence |