AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041191.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041191.01.T02 MTR_7g106320 96.491 342 5 1 1 342 110 444 0.0 681
MsG0780041191.01.T02 MTR_1g057790 72.543 346 84 4 1 342 103 441 2.59e-154 448
MsG0780041191.01.T02 MTR_4g051532 63.664 333 94 5 19 337 172 491 2.91e-126 378
MsG0780041191.01.T02 MTR_1g023050 55.629 302 99 8 43 324 145 431 2.12e-103 317
MsG0780041191.01.T02 MTR_3g112300 54.317 278 95 6 63 326 163 422 6.09e-96 294
MsG0780041191.01.T02 MTR_3g112300 53.659 287 96 7 59 326 154 422 2.97e-95 295
MsG0780041191.01.T02 MTR_8g078480 53.929 280 122 2 63 338 389 665 1.99e-90 288
MsG0780041191.01.T02 MTR_5g018860 50.530 283 129 3 63 340 339 615 4.63e-88 280
MsG0780041191.01.T02 MTR_8g098815 52.416 269 115 4 51 312 170 432 3.07e-84 267
MsG0780041191.01.T02 MTR_3g112300 51.807 249 88 6 63 297 163 393 1.50e-78 246
MsG0780041191.01.T02 MTR_3g112290 47.492 299 122 9 60 342 163 442 1.19e-75 239
MsG0780041191.01.T02 MTR_2g095050 38.739 333 162 8 9 321 201 511 1.12e-66 221
MsG0780041191.01.T02 MTR_4g019450 45.390 282 115 7 66 339 200 450 1.27e-66 220
MsG0780041191.01.T02 MTR_7g065050 43.066 274 131 5 66 336 141 392 3.57e-65 214
MsG0780041191.01.T02 MTR_3g112300 49.339 227 83 6 63 275 163 371 4.45e-65 210
MsG0780041191.01.T02 MTR_1g016490 39.313 262 141 7 63 318 244 493 1.30e-50 176
MsG0780041191.01.T01 MTR_7g106320 96.491 342 5 1 1 342 110 444 0.0 681
MsG0780041191.01.T01 MTR_1g057790 72.543 346 84 4 1 342 103 441 2.59e-154 448
MsG0780041191.01.T01 MTR_4g051532 63.664 333 94 5 19 337 172 491 2.91e-126 378
MsG0780041191.01.T01 MTR_1g023050 55.629 302 99 8 43 324 145 431 2.12e-103 317
MsG0780041191.01.T01 MTR_3g112300 54.317 278 95 6 63 326 163 422 6.09e-96 294
MsG0780041191.01.T01 MTR_3g112300 53.659 287 96 7 59 326 154 422 2.97e-95 295
MsG0780041191.01.T01 MTR_8g078480 53.929 280 122 2 63 338 389 665 1.99e-90 288
MsG0780041191.01.T01 MTR_5g018860 50.530 283 129 3 63 340 339 615 4.63e-88 280
MsG0780041191.01.T01 MTR_8g098815 52.416 269 115 4 51 312 170 432 3.07e-84 267
MsG0780041191.01.T01 MTR_3g112300 51.807 249 88 6 63 297 163 393 1.50e-78 246
MsG0780041191.01.T01 MTR_3g112290 47.492 299 122 9 60 342 163 442 1.19e-75 239
MsG0780041191.01.T01 MTR_2g095050 38.739 333 162 8 9 321 201 511 1.12e-66 221
MsG0780041191.01.T01 MTR_4g019450 45.390 282 115 7 66 339 200 450 1.27e-66 220
MsG0780041191.01.T01 MTR_7g065050 43.066 274 131 5 66 336 141 392 3.57e-65 214
MsG0780041191.01.T01 MTR_3g112300 49.339 227 83 6 63 275 163 371 4.45e-65 210
MsG0780041191.01.T01 MTR_1g016490 39.313 262 141 7 63 318 244 493 1.30e-50 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041191.01.T02 AT2G35940 62.599 377 100 10 1 342 111 481 4.05e-125 374
MsG0780041191.01.T02 AT2G35940 62.599 377 100 10 1 342 111 481 4.05e-125 374
MsG0780041191.01.T02 AT2G35940 62.599 377 100 10 1 342 111 481 4.05e-125 374
MsG0780041191.01.T02 AT2G16400 54.983 291 99 5 54 330 98 370 6.76e-101 306
MsG0780041191.01.T02 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T02 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T02 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T02 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T02 AT1G75410 53.497 286 115 7 63 342 168 441 2.70e-95 293
MsG0780041191.01.T02 AT1G75410 53.497 286 115 7 63 342 168 441 2.70e-95 293
MsG0780041191.01.T02 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T02 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T02 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T02 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T02 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T02 AT2G27220 50.865 289 99 7 48 333 64 312 2.77e-85 264
MsG0780041191.01.T02 AT2G27220 50.865 289 99 7 48 333 64 312 2.77e-85 264
MsG0780041191.01.T02 AT4G36870 49.169 301 125 5 61 340 310 603 1.49e-83 268
MsG0780041191.01.T02 AT4G36870 49.169 301 125 5 61 340 310 603 1.49e-83 268
MsG0780041191.01.T02 AT2G27220 47.883 307 99 8 48 333 64 330 1.68e-81 255
MsG0780041191.01.T02 AT2G23760 51.136 264 116 3 60 316 234 491 3.30e-80 256
MsG0780041191.01.T02 AT2G23760 51.136 264 116 3 60 316 234 491 3.30e-80 256
MsG0780041191.01.T02 AT2G23760 51.136 264 116 3 60 316 234 491 3.30e-80 256
MsG0780041191.01.T02 AT5G41410 47.826 276 133 3 61 325 192 467 6.30e-79 253
MsG0780041191.01.T02 AT1G75410 52.941 238 96 6 63 296 168 393 9.37e-77 241
MsG0780041191.01.T02 AT2G23760 42.722 316 116 4 60 316 234 543 4.31e-70 231
MsG0780041191.01.T02 AT4G36870 49.180 244 110 4 61 297 310 546 7.34e-67 220
MsG0780041191.01.T02 AT4G36870 48.760 242 110 4 61 295 310 544 1.85e-65 216
MsG0780041191.01.T02 AT1G75430 41.379 290 142 8 63 340 17 290 1.85e-64 206
MsG0780041191.01.T02 AT5G02030 54.595 185 75 3 144 319 234 418 1.34e-60 204
MsG0780041191.01.T02 AT4G32980 39.700 267 142 5 63 328 202 450 5.52e-55 187
MsG0780041191.01.T02 AT4G32980 39.700 267 142 5 63 328 202 450 5.52e-55 187
MsG0780041191.01.T02 AT2G27990 39.024 328 152 11 6 321 205 496 1.69e-54 188
MsG0780041191.01.T02 AT1G75430 36.444 225 118 7 63 275 17 228 1.18e-34 128
MsG0780041191.01.T02 AT2G27990 32.624 282 142 11 6 275 205 450 1.97e-26 109
MsG0780041191.01.T01 AT2G35940 62.599 377 100 10 1 342 111 481 4.05e-125 374
MsG0780041191.01.T01 AT2G35940 62.599 377 100 10 1 342 111 481 4.05e-125 374
MsG0780041191.01.T01 AT2G35940 62.599 377 100 10 1 342 111 481 4.05e-125 374
MsG0780041191.01.T01 AT2G16400 54.983 291 99 5 54 330 98 370 6.76e-101 306
MsG0780041191.01.T01 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T01 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T01 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T01 AT4G34610 52.308 325 129 8 23 337 94 402 4.71e-97 298
MsG0780041191.01.T01 AT1G75410 53.497 286 115 7 63 342 168 441 2.70e-95 293
MsG0780041191.01.T01 AT1G75410 53.497 286 115 7 63 342 168 441 2.70e-95 293
MsG0780041191.01.T01 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T01 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T01 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T01 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T01 AT1G19700 56.272 279 104 9 63 332 166 435 9.94e-93 286
MsG0780041191.01.T01 AT2G27220 50.865 289 99 7 48 333 64 312 2.77e-85 264
MsG0780041191.01.T01 AT2G27220 50.865 289 99 7 48 333 64 312 2.77e-85 264
MsG0780041191.01.T01 AT4G36870 49.169 301 125 5 61 340 310 603 1.49e-83 268
MsG0780041191.01.T01 AT4G36870 49.169 301 125 5 61 340 310 603 1.49e-83 268
MsG0780041191.01.T01 AT2G27220 47.883 307 99 8 48 333 64 330 1.68e-81 255
MsG0780041191.01.T01 AT2G23760 51.136 264 116 3 60 316 234 491 3.30e-80 256
MsG0780041191.01.T01 AT2G23760 51.136 264 116 3 60 316 234 491 3.30e-80 256
MsG0780041191.01.T01 AT2G23760 51.136 264 116 3 60 316 234 491 3.30e-80 256
MsG0780041191.01.T01 AT5G41410 47.826 276 133 3 61 325 192 467 6.30e-79 253
MsG0780041191.01.T01 AT1G75410 52.941 238 96 6 63 296 168 393 9.37e-77 241
MsG0780041191.01.T01 AT2G23760 42.722 316 116 4 60 316 234 543 4.31e-70 231
MsG0780041191.01.T01 AT4G36870 49.180 244 110 4 61 297 310 546 7.34e-67 220
MsG0780041191.01.T01 AT4G36870 48.760 242 110 4 61 295 310 544 1.85e-65 216
MsG0780041191.01.T01 AT1G75430 41.379 290 142 8 63 340 17 290 1.85e-64 206
MsG0780041191.01.T01 AT5G02030 54.595 185 75 3 144 319 234 418 1.34e-60 204
MsG0780041191.01.T01 AT4G32980 39.700 267 142 5 63 328 202 450 5.52e-55 187
MsG0780041191.01.T01 AT4G32980 39.700 267 142 5 63 328 202 450 5.52e-55 187
MsG0780041191.01.T01 AT2G27990 39.024 328 152 11 6 321 205 496 1.69e-54 188
MsG0780041191.01.T01 AT1G75430 36.444 225 118 7 63 275 17 228 1.18e-34 128
MsG0780041191.01.T01 AT2G27990 32.624 282 142 11 6 275 205 450 1.97e-26 109

Find 3 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAACATGAAATGCAATCA+AGG 0.501897 7:-87904176 None:intergenic
ACTTCTTCTGATCTATTCAC+AGG 0.566956 7:+87904358 MsG0780041191.01.T01:five_prime_UTR
CAAATGATTTGAAAAGAACA+AGG 0.625418 7:+87904321 MsG0780041191.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATAATTTAATATA+TGG + Chr7:87906361-87906380 MsG0780041191.01.T01:intron 0.0%
!! ATATATATAATTTAATATAT+GGG + Chr7:87906362-87906381 MsG0780041191.01.T01:intron 0.0%
!! ATATATATATATATATATAT+TGG - Chr7:87910093-87910074 None:intergenic 0.0%
!! AAAATGTAATTATAAAAATG+AGG - Chr7:87908088-87908107 None:intergenic 10.0%
!! ATATATATATATCTTTGATT+GGG + Chr7:87910082-87910101 MsG0780041191.01.T01:three_prime_UTR 10.0%
!! TAAAATATTAATGTAATCTA+AGG - Chr7:87907051-87907070 None:intergenic 10.0%
!! TATATATATATATCTTTGAT+TGG + Chr7:87910081-87910100 MsG0780041191.01.T01:three_prime_UTR 10.0%
!!! ATAAGTTTAGTATAATTTTT+TGG + Chr7:87906604-87906623 MsG0780041191.01.T01:intron 10.0%
!!! TAATTACATTTTGAATTTAA+CGG + Chr7:87908096-87908115 MsG0780041191.01.T01:intron 10.0%
!!! TTTTAACAATTTTTTTTAAC+TGG + Chr7:87906910-87906929 MsG0780041191.01.T01:intron 10.0%
!! AACTTTATAATGAGTTAAAA+TGG - Chr7:87906630-87906649 None:intergenic 15.0%
!! AATAATATTATAGCAATGAA+TGG + Chr7:87907723-87907742 MsG0780041191.01.T01:intron 15.0%
!! TGATCTAATAATTATATACT+TGG + Chr7:87905255-87905274 MsG0780041191.01.T01:intron 15.0%
!!! AAAGATTTTTACATTAGTAT+AGG + Chr7:87909902-87909921 MsG0780041191.01.T01:three_prime_UTR 15.0%
!!! ATTTTTGTAATTTCTATAGA+TGG + Chr7:87910003-87910022 MsG0780041191.01.T01:three_prime_UTR 15.0%
!!! TTTTTGTAATTTCTATAGAT+GGG + Chr7:87910004-87910023 MsG0780041191.01.T01:three_prime_UTR 15.0%
!! ATCTATCTATATATCTATCT+TGG - Chr7:87904574-87904593 None:intergenic 20.0%
!! ATTAAATATGTGTATATACC+TGG - Chr7:87904880-87904899 None:intergenic 20.0%
!! ATTTGAATATGCCAAAAATA+AGG - Chr7:87908951-87908970 None:intergenic 20.0%
!! CATCAAGGTTAAATTATAAA+TGG - Chr7:87907150-87907169 None:intergenic 20.0%
!! TAAAACTAACCTATAAGAAA+CGG - Chr7:87904775-87904794 None:intergenic 20.0%
!! TAATTTCAATAAAACTTGCA+TGG + Chr7:87907985-87908004 MsG0780041191.01.T01:intron 20.0%
!! TCTATCTATATATCTATCTT+GGG - Chr7:87904573-87904592 None:intergenic 20.0%
!! TTACTACCAATAATAACAAT+GGG + Chr7:87905968-87905987 MsG0780041191.01.T01:CDS 20.0%
!! TTATGTTGTATTTGAAAATG+TGG + Chr7:87905349-87905368 MsG0780041191.01.T01:intron 20.0%
!!! AAATTAGAAAAGTGTACTTA+CGG - Chr7:87908568-87908587 None:intergenic 20.0%
!!! AACACAATCTTTTAAAATAG+AGG + Chr7:87907747-87907766 MsG0780041191.01.T01:intron 20.0%
!!! AATTTTGTTTGAATTGTAAC+AGG + Chr7:87908986-87909005 MsG0780041191.01.T01:intron 20.0%
!!! ACAATTTCTTTCCTTATTTT+TGG + Chr7:87908937-87908956 MsG0780041191.01.T01:intron 20.0%
!!! ATTAATTTTCCTTTTCAGTT+TGG + Chr7:87904498-87904517 MsG0780041191.01.T01:intron 20.0%
!!! ATTTTTACTCAAAAAACCAA+TGG + Chr7:87905475-87905494 MsG0780041191.01.T01:five_prime_UTR 20.0%
!!! CTATATTCTAAGAATTCAAA+TGG - Chr7:87909946-87909965 None:intergenic 20.0%
!!! GAGTCATTTAGTAAAAATTT+TGG + Chr7:87907428-87907447 MsG0780041191.01.T01:intron 20.0%
!!! TAATATTTTATCACAGTCAA+TGG + Chr7:87907061-87907080 MsG0780041191.01.T01:intron 20.0%
!!! TATTAACTTTTTTTTCTACG+TGG + Chr7:87906722-87906741 MsG0780041191.01.T01:intron 20.0%
!!! TCTTCTATTATGTTTTACTT+TGG + Chr7:87904660-87904679 MsG0780041191.01.T01:intron 20.0%
! AAACTACTCTTGTACTTATA+AGG + Chr7:87906981-87907000 MsG0780041191.01.T01:intron 25.0%
! AAATTGGAAAAAGAGAGAAA+AGG - Chr7:87905088-87905107 None:intergenic 25.0%
! AATAACATGAAATGCAATCA+AGG - Chr7:87904179-87904198 None:intergenic 25.0%
! AATTGCTAAGCATCAAATAT+TGG + Chr7:87905211-87905230 MsG0780041191.01.T01:intron 25.0%
! AATTGTAACAGGTTTCAAAT+TGG + Chr7:87908997-87909016 MsG0780041191.01.T01:intron 25.0%
! ACATTATTACTTGAAAACCT+TGG - Chr7:87909574-87909593 None:intergenic 25.0%
! AGAGAAATGATAAAAAGACT+TGG - Chr7:87904462-87904481 None:intergenic 25.0%
! ATCATGATAAGCTTGAAAAT+TGG - Chr7:87905104-87905123 None:intergenic 25.0%
! ATGAAGGAAAATGAACTAAA+TGG + Chr7:87909080-87909099 MsG0780041191.01.T01:CDS 25.0%
! ATGTTGATACTTTCATATTG+AGG - Chr7:87909727-87909746 None:intergenic 25.0%
! ATTGCTAAGCATCAAATATT+GGG + Chr7:87905212-87905231 MsG0780041191.01.T01:intron 25.0%
! CAAATGATTTGAAAAGAACA+AGG + Chr7:87904321-87904340 MsG0780041191.01.T01:five_prime_UTR 25.0%
! CAATATATATCACATTCTTC+CGG - Chr7:87907464-87907483 None:intergenic 25.0%
! CTTATTTGATACCAAATCTA+AGG + Chr7:87907340-87907359 MsG0780041191.01.T01:intron 25.0%
! GAATTCTTAGAATATAGCTT+AGG + Chr7:87909949-87909968 MsG0780041191.01.T01:three_prime_UTR 25.0%
! GAGAAATGATAAAAAGACTT+GGG - Chr7:87904461-87904480 None:intergenic 25.0%
! GATTGAAGATTAGATATAGT+TGG + Chr7:87907543-87907562 MsG0780041191.01.T01:intron 25.0%
! GTCCTAAATAATACATTGAA+GGG + Chr7:87909792-87909811 MsG0780041191.01.T01:three_prime_UTR 25.0%
! GTTACTACCAATAATAACAA+TGG + Chr7:87905967-87905986 MsG0780041191.01.T01:CDS 25.0%
! TAAAATATGTGTGGATAATG+AGG + Chr7:87904412-87904431 MsG0780041191.01.T01:intron 25.0%
! TAACATCAATGAAGCTATTA+GGG - Chr7:87909390-87909409 None:intergenic 25.0%
! TATATACTGGTATTATTGCT+AGG + Chr7:87907118-87907137 MsG0780041191.01.T01:intron 25.0%
! TCAGAATATTGTATATAGCT+TGG - Chr7:87905587-87905606 None:intergenic 25.0%
! TGTCCTAAATAATACATTGA+AGG + Chr7:87909791-87909810 MsG0780041191.01.T01:three_prime_UTR 25.0%
! TTAACATCAATGAAGCTATT+AGG - Chr7:87909391-87909410 None:intergenic 25.0%
! TTTATAGAACCAAACTCATT+TGG - Chr7:87909694-87909713 None:intergenic 25.0%
!! AATTAGAAAAGTGTACTTAC+GGG - Chr7:87908567-87908586 None:intergenic 25.0%
!! ATAAAGTTACACCTTTTCAA+AGG - Chr7:87907834-87907853 None:intergenic 25.0%
!! ATTATTTAGGACACAAAATC+TGG - Chr7:87909784-87909803 None:intergenic 25.0%
!! TCTATTATGTTTTACTTTGG+TGG + Chr7:87904663-87904682 MsG0780041191.01.T01:intron 25.0%
!! TTTTCAAATCATTTGATGCA+AGG - Chr7:87904316-87904335 None:intergenic 25.0%
!!! AGAGTAGTTTTTTTTTTCCA+AGG - Chr7:87906971-87906990 None:intergenic 25.0%
!!! ATAGAAGACACTTTTTATGA+AGG + Chr7:87906390-87906409 MsG0780041191.01.T01:intron 25.0%
!!! GTTATTTTCTCAACATTTGT+TGG - Chr7:87908636-87908655 None:intergenic 25.0%
!!! GTTGGTGTCATAATTTTTAT+TGG + Chr7:87910040-87910059 MsG0780041191.01.T01:three_prime_UTR 25.0%
!!! TCAATTTTTAGCTTGAAACT+TGG + Chr7:87907644-87907663 MsG0780041191.01.T01:intron 25.0%
AAAAGCTACAAATAAGAGCT+TGG + Chr7:87908354-87908373 MsG0780041191.01.T01:CDS 30.0%
AAACAATCTCAAAGCAGTTT+CGG + Chr7:87908302-87908321 MsG0780041191.01.T01:CDS 30.0%
AAAGCTACAAATAAGAGCTT+GGG + Chr7:87908355-87908374 MsG0780041191.01.T01:CDS 30.0%
AAAGTGAAAATCACACCTTA+AGG + Chr7:87906500-87906519 MsG0780041191.01.T01:intron 30.0%
AAATGAACTAAATGGATCTG+AGG + Chr7:87909088-87909107 MsG0780041191.01.T01:CDS 30.0%
AACCAAACAAATTTCATTGG+TGG + Chr7:87909493-87909512 MsG0780041191.01.T01:three_prime_UTR 30.0%
AATAATAACAATGGGAATCC+GGG + Chr7:87905976-87905995 MsG0780041191.01.T01:CDS 30.0%
AATAATGTTTCACTCACTCT+TGG + Chr7:87909586-87909605 MsG0780041191.01.T01:three_prime_UTR 30.0%
AATGTACGTAGAAGAAATGA+AGG + Chr7:87909064-87909083 MsG0780041191.01.T01:CDS 30.0%
AATTTCACTCCAAACTGAAA+AGG - Chr7:87904510-87904529 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG - Chr7:87906458-87906477 None:intergenic 30.0%
ACTCAAACGATAGAAAAACT+GGG - Chr7:87906858-87906877 None:intergenic 30.0%
AGGAATAGTAAGTATTTCTC+TGG + Chr7:87907279-87907298 MsG0780041191.01.T01:intron 30.0%
ATAAGTGAACCAAATGAGTT+TGG + Chr7:87909682-87909701 MsG0780041191.01.T01:three_prime_UTR 30.0%
ATAGAAGAAGAGAGAAAACA+TGG - Chr7:87904741-87904760 None:intergenic 30.0%
ATCAAGAAGGTAGTCTAAAT+GGG - Chr7:87907175-87907194 None:intergenic 30.0%
ATCTCTAGCTAATATCAAGA+AGG - Chr7:87907188-87907207 None:intergenic 30.0%
ATTTATACATCTTGAGCACT+TGG - Chr7:87908734-87908753 None:intergenic 30.0%
CAAGTCTTAGGTTTCTATTT+AGG + Chr7:87907259-87907278 MsG0780041191.01.T01:intron 30.0%
CAATAATAACAATGGGAATC+CGG + Chr7:87905975-87905994 MsG0780041191.01.T01:CDS 30.0%
CACCCTTCAATGTATTATTT+AGG - Chr7:87909797-87909816 None:intergenic 30.0%
CAGAAATTATTGGAGTTTCT+TGG - Chr7:87909231-87909250 None:intergenic 30.0%
CCCTATTTGTATTAATCACA+CGG + Chr7:87907684-87907703 MsG0780041191.01.T01:intron 30.0%
CCGTGTGATTAATACAAATA+GGG - Chr7:87907687-87907706 None:intergenic 30.0%
CCTATTTGTATTAATCACAC+GGG + Chr7:87907685-87907704 MsG0780041191.01.T01:intron 30.0%
CTATCGTTTGAGTATTTAAG+TGG + Chr7:87906865-87906884 MsG0780041191.01.T01:intron 30.0%
CTCAAACAGTAAAATATGTG+TGG + Chr7:87904403-87904422 MsG0780041191.01.T01:intron 30.0%
CTCTTGTACTTATAAGGAAA+CGG + Chr7:87906987-87907006 MsG0780041191.01.T01:intron 30.0%
GAATATAGCTTAGGATTTGA+TGG + Chr7:87909958-87909977 MsG0780041191.01.T01:three_prime_UTR 30.0%
GACTTACAGTCAATAATAGT+GGG + Chr7:87907784-87907803 MsG0780041191.01.T01:intron 30.0%
GAGGAACTATCAATGAAATT+TGG + Chr7:87909430-87909449 MsG0780041191.01.T01:three_prime_UTR 30.0%
GATAATGAGGTGAATAAAGA+TGG + Chr7:87904425-87904444 MsG0780041191.01.T01:intron 30.0%
GATTCATCATTATTGTTGAC+GGG + Chr7:87905277-87905296 MsG0780041191.01.T01:intron 30.0%
GGAAACCAAACAAATTTCAT+TGG + Chr7:87909490-87909509 MsG0780041191.01.T01:three_prime_UTR 30.0%
GGAAATGTTAGAAACAATTC+AGG + Chr7:87909280-87909299 MsG0780041191.01.T01:three_prime_UTR 30.0%
GGATTCATCATTATTGTTGA+CGG + Chr7:87905276-87905295 MsG0780041191.01.T01:intron 30.0%
GGTCTAGAAACAGAAATTAT+TGG - Chr7:87909241-87909260 None:intergenic 30.0%
GGTTTATAAATGCTAGAGTT+AGG + Chr7:87909018-87909037 MsG0780041191.01.T01:CDS 30.0%
GTTGAGAAAAACATAGTTAC+CGG - Chr7:87905654-87905673 None:intergenic 30.0%
TAAATAGATGAAGCTTGTAG+AGG - Chr7:87905062-87905081 None:intergenic 30.0%
TACTCAAACGATAGAAAAAC+TGG - Chr7:87906859-87906878 None:intergenic 30.0%
TATCAAGAAGGTAGTCTAAA+TGG - Chr7:87907176-87907195 None:intergenic 30.0%
TCTGAGCTCCAAATATTTAA+GGG + Chr7:87906008-87906027 MsG0780041191.01.T01:CDS 30.0%
TCTTGTACTTATAAGGAAAC+GGG + Chr7:87906988-87907007 MsG0780041191.01.T01:intron 30.0%
TGAAGATTAGATATAGTTGG+TGG + Chr7:87907546-87907565 MsG0780041191.01.T01:intron 30.0%
TGACTTACAGTCAATAATAG+TGG + Chr7:87907783-87907802 MsG0780041191.01.T01:intron 30.0%
TGGGAATTCACTTGTTTAAT+GGG + Chr7:87905231-87905250 MsG0780041191.01.T01:intron 30.0%
TGTTTGAAAGATGCAATAAC+AGG + Chr7:87908325-87908344 MsG0780041191.01.T01:CDS 30.0%
TTCTGAGCTCCAAATATTTA+AGG + Chr7:87906007-87906026 MsG0780041191.01.T01:CDS 30.0%
TTGCATGGATTTAAACGATA+TGG + Chr7:87908000-87908019 MsG0780041191.01.T01:intron 30.0%
TTGGGAATTCACTTGTTTAA+TGG + Chr7:87905230-87905249 MsG0780041191.01.T01:intron 30.0%
TTTCTAACATTTCCAACAAG+TGG - Chr7:87909274-87909293 None:intergenic 30.0%
! AAAATGTGGTTGTGTTTTGT+GGG + Chr7:87905363-87905382 MsG0780041191.01.T01:intron 30.0%
! AAATTTTGGATGTGTTAGAC+CGG + Chr7:87907442-87907461 MsG0780041191.01.T01:intron 30.0%
! ACTCTAAAGAAAGGTTTGTT+AGG + Chr7:87907208-87907227 MsG0780041191.01.T01:intron 30.0%
! ACTGTTTCTTGCGATTTATA+AGG - Chr7:87907099-87907118 None:intergenic 30.0%
! AGAGATGGTTACTCTTTTAT+GGG + Chr7:87909469-87909488 MsG0780041191.01.T01:three_prime_UTR 30.0%
! ATACCAAATCTAAGGTATAG+AGG + Chr7:87907348-87907367 MsG0780041191.01.T01:intron 30.0%
! ATCCACCAATGAAATTTGTT+TGG - Chr7:87909498-87909517 None:intergenic 30.0%
! GATTTGATGGTATATGATTG+AGG + Chr7:87909971-87909990 MsG0780041191.01.T01:three_prime_UTR 30.0%
! GGTTCTTGTTTATTCAACAA+AGG - Chr7:87910135-87910154 None:intergenic 30.0%
! TAGAGATGGTTACTCTTTTA+TGG + Chr7:87909468-87909487 MsG0780041191.01.T01:three_prime_UTR 30.0%
! TTCTTCACTTCATGTGATTT+TGG + Chr7:87906279-87906298 MsG0780041191.01.T01:intron 30.0%
! TTCTTCCTAGTTGAATGTTT+TGG - Chr7:87909654-87909673 None:intergenic 30.0%
! TTTTAACAAGTCACACCTTA+AGG - Chr7:87906518-87906537 None:intergenic 30.0%
!! AATTCTGAAATCCAATCAAG+TGG + Chr7:87905518-87905537 MsG0780041191.01.T01:five_prime_UTR 30.0%
!! ACAAATTTCATTGGTGGATT+TGG + Chr7:87909499-87909518 MsG0780041191.01.T01:three_prime_UTR 30.0%
!! ACACCAACTTACTTTTATGA+AGG + Chr7:87906452-87906471 MsG0780041191.01.T01:intron 30.0%
!! ATTTGTTTTCAGCTATCCAA+AGG + Chr7:87908823-87908842 MsG0780041191.01.T01:intron 30.0%
!! CTCTAAAATCCGTTTCTTAT+AGG + Chr7:87904763-87904782 MsG0780041191.01.T01:intron 30.0%
!! CTCTAAAGAAAGGTTTGTTA+GGG + Chr7:87907209-87907228 MsG0780041191.01.T01:intron 30.0%
!!! GAGAATTGTTTTTGCTAAAG+TGG + Chr7:87906744-87906763 MsG0780041191.01.T01:intron 30.0%
!!! TTTTTTCCAAGGTGTTGAAT+TGG - Chr7:87906960-87906979 None:intergenic 30.0%
AACCTACCAATATCACCAAT+TGG - Chr7:87909532-87909551 None:intergenic 35.0%
AAGGAAGTCCTAAAAAACCA+AGG + Chr7:87909344-87909363 MsG0780041191.01.T01:three_prime_UTR 35.0%
AATTCAGGATTCAGCTTCAT+TGG + Chr7:87909295-87909314 MsG0780041191.01.T01:three_prime_UTR 35.0%
ACATGCTTGCAAAACAAACA+GGG + Chr7:87908858-87908877 MsG0780041191.01.T01:CDS 35.0%
ACCTACCAATATCACCAATT+GGG - Chr7:87909531-87909550 None:intergenic 35.0%
ACTTCTTCTGATCTATTCAC+AGG + Chr7:87904358-87904377 MsG0780041191.01.T01:five_prime_UTR 35.0%
AGAACAGAAACAGATCTTTC+AGG - Chr7:87908514-87908533 None:intergenic 35.0%
ATAATAACAATGGGAATCCG+GGG + Chr7:87905977-87905996 MsG0780041191.01.T01:CDS 35.0%
ATAGATGGGATGAGATAGAT+GGG + Chr7:87910018-87910037 MsG0780041191.01.T01:three_prime_UTR 35.0%
ATCACATGTACACATGCATA+TGG - Chr7:87904600-87904619 None:intergenic 35.0%
ATCTATCTTGGGATTCATCA+AGG - Chr7:87904562-87904581 None:intergenic 35.0%
ATGAAATACCTCATCAAGCA+TGG - Chr7:87906259-87906278 None:intergenic 35.0%
ATGTGCAGCCCTTAAATATT+TGG - Chr7:87906019-87906038 None:intergenic 35.0%
ATTGGATCATCAGAACTAGA+AGG + Chr7:87909313-87909332 MsG0780041191.01.T01:three_prime_UTR 35.0%
CACTTCAAAGTTATGAAGCA+TGG + Chr7:87908593-87908612 MsG0780041191.01.T01:intron 35.0%
CATTGATGTTAAGCACAATG+AGG + Chr7:87909399-87909418 MsG0780041191.01.T01:three_prime_UTR 35.0%
CCAAACCAAAACATTCAACT+AGG + Chr7:87909646-87909665 MsG0780041191.01.T01:three_prime_UTR 35.0%
CCCGTGTGATTAATACAAAT+AGG - Chr7:87907688-87907707 None:intergenic 35.0%
GACATAGAAACAAATCTTGC+TGG - Chr7:87905919-87905938 None:intergenic 35.0%
GAGGTAAAATTGAAGGTTCA+AGG + Chr7:87908395-87908414 MsG0780041191.01.T01:CDS 35.0%
GATAATTGAGTCTAACAGAG+TGG + Chr7:87904533-87904552 MsG0780041191.01.T01:intron 35.0%
GATACTTTCATATTGAGGAG+AGG - Chr7:87909722-87909741 None:intergenic 35.0%
GATGAGAGACAAAATAGAGA+TGG + Chr7:87909454-87909473 MsG0780041191.01.T01:three_prime_UTR 35.0%
GCTTGAAACTTGGATATACA+TGG + Chr7:87907654-87907673 MsG0780041191.01.T01:intron 35.0%
GGAATAAGCAAGGTGAATAT+TGG + Chr7:87906102-87906121 MsG0780041191.01.T01:CDS 35.0%
GTGAATATTGGAGAATCATC+AGG + Chr7:87906114-87906133 MsG0780041191.01.T01:CDS 35.0%
TAAATGCTAGAGTTAGGCTT+TGG + Chr7:87909024-87909043 MsG0780041191.01.T01:CDS 35.0%
TACTAGAGAGAAGAGAAAGT+TGG - Chr7:87907376-87907395 None:intergenic 35.0%
TACTGGTATTATTGCTAGGT+AGG + Chr7:87907122-87907141 MsG0780041191.01.T01:intron 35.0%
TAGGGTTATGCATAAGTTCA+TGG - Chr7:87909372-87909391 None:intergenic 35.0%
TAGTCTAAATGGGTACATCA+AGG - Chr7:87907165-87907184 None:intergenic 35.0%
TATAGATGGGATGAGATAGA+TGG + Chr7:87910017-87910036 MsG0780041191.01.T01:three_prime_UTR 35.0%
TATCACACTCTCTCATGAAA+GGG + Chr7:87909848-87909867 MsG0780041191.01.T01:three_prime_UTR 35.0%
TCAACATGCAAAACCCAAAA+AGG + Chr7:87909740-87909759 MsG0780041191.01.T01:three_prime_UTR 35.0%
TCGCAAGAAACAGTATATAC+TGG + Chr7:87907105-87907124 MsG0780041191.01.T01:intron 35.0%
TGAACTAGCTCCCAATTTAT+GGG - Chr7:87907308-87907327 None:intergenic 35.0%
TGTGTGGAATTGTAACCTTT+AGG - Chr7:87909193-87909212 None:intergenic 35.0%
TGTTAAAAGACACCACCAAA+GGG + Chr7:87906530-87906549 MsG0780041191.01.T01:intron 35.0%
TTAAGTGGTTTCACTTGTAC+AGG + Chr7:87906880-87906899 MsG0780041191.01.T01:intron 35.0%
TTATCACACTCTCTCATGAA+AGG + Chr7:87909847-87909866 MsG0780041191.01.T01:three_prime_UTR 35.0%
TTCAAAGGACAAGAAGAGTA+AGG - Chr7:87907819-87907838 None:intergenic 35.0%
TTGCATGTGTTTGTTCTGTT+TGG + Chr7:87905319-87905338 MsG0780041191.01.T01:intron 35.0%
TTGGATCATCAGAACTAGAA+GGG + Chr7:87909314-87909333 MsG0780041191.01.T01:three_prime_UTR 35.0%
TTGTTAAAAGACACCACCAA+AGG + Chr7:87906529-87906548 MsG0780041191.01.T01:intron 35.0%
! ACTCTTCTTGTCCTTTGAAA+AGG + Chr7:87907820-87907839 MsG0780041191.01.T01:intron 35.0%
! ATTTACTTGTTGGTTGAAGG+TGG + Chr7:87908174-87908193 MsG0780041191.01.T01:intron 35.0%
! CAATACCCAATTGGTGATAT+TGG + Chr7:87909523-87909542 MsG0780041191.01.T01:three_prime_UTR 35.0%
! CGGATTCCCATTGTTATTAT+TGG - Chr7:87905977-87905996 None:intergenic 35.0%
! GAAAATGTGGTTGTGTTTTG+TGG + Chr7:87905362-87905381 MsG0780041191.01.T01:intron 35.0%
! GCTAGAGATACTCTAAAGAA+AGG + Chr7:87907199-87907218 MsG0780041191.01.T01:intron 35.0%
!! AGATTTGTTTCTATGTCTGG+TGG + Chr7:87905922-87905941 MsG0780041191.01.T01:CDS 35.0%
!! CTCGCAGTCTTTAAAATCTT+CGG + Chr7:87908755-87908774 MsG0780041191.01.T01:intron 35.0%
!! CTTGGTCTTGATTCAATACA+AGG + Chr7:87909604-87909623 MsG0780041191.01.T01:three_prime_UTR 35.0%
!! GATTAGATATAGTTGGTGGA+AGG + Chr7:87907550-87907569 MsG0780041191.01.T01:intron 35.0%
!! GCAAGATTTGTTTCTATGTC+TGG + Chr7:87905919-87905938 MsG0780041191.01.T01:CDS 35.0%
!! TAAAGAAAGGTTTGTTAGGG+AGG + Chr7:87907212-87907231 MsG0780041191.01.T01:intron 35.0%
!! TATTGGAGTTTCTTGGCTTT+TGG - Chr7:87909224-87909243 None:intergenic 35.0%
!! TGCTTTGGAGGTAAAATTGA+AGG + Chr7:87908388-87908407 MsG0780041191.01.T01:CDS 35.0%
!!! CCTAGTTGAATGTTTTGGTT+TGG - Chr7:87909649-87909668 None:intergenic 35.0%
!!! TCATGGTTCCTTGGTTTTTT+AGG - Chr7:87909355-87909374 None:intergenic 35.0%
AAAAACATAGTTACCGGTCG+CGG - Chr7:87905648-87905667 None:intergenic 40.0%
AAACCACAACCTCCATTTGA+TGG - Chr7:87908222-87908241 None:intergenic 40.0%
AAATAAGAGCTTGGGTGAAG+AGG + Chr7:87908363-87908382 MsG0780041191.01.T01:CDS 40.0%
ACAACGTGCTTTACAACAGT+TGG + Chr7:87908447-87908466 MsG0780041191.01.T01:CDS 40.0%
ACATTGAAGGGTGAACAATG+TGG + Chr7:87909804-87909823 MsG0780041191.01.T01:three_prime_UTR 40.0%
ACCTCAGAAACAGAACCTAA+AGG + Chr7:87909175-87909194 MsG0780041191.01.T01:three_prime_UTR 40.0%
ACGTACATTTCTTCCACCAT+TGG - Chr7:87909053-87909072 None:intergenic 40.0%
ACTCAGAACAATTTGCACCA+AGG + Chr7:87909554-87909573 MsG0780041191.01.T01:three_prime_UTR 40.0%
ACTTGTATACCACCCAACAT+TGG - Chr7:87907244-87907263 None:intergenic 40.0%
ATCTTTCAGGCAATCCTCTT+TGG - Chr7:87908501-87908520 None:intergenic 40.0%
ATGTGCTTGTCTGAATCCTT+TGG - Chr7:87908842-87908861 None:intergenic 40.0%
ATTGGAGAATCATCAGGTGT+TGG + Chr7:87906120-87906139 MsG0780041191.01.T01:CDS 40.0%
CAAAACAAACAGGGCTTACT+AGG + Chr7:87908867-87908886 MsG0780041191.01.T01:CDS 40.0%
CAACGTGCTTTACAACAGTT+GGG + Chr7:87908448-87908467 MsG0780041191.01.T01:CDS 40.0%
CACATGCTTGCAAAACAAAC+AGG + Chr7:87908857-87908876 MsG0780041191.01.T01:CDS 40.0%
GAACTAGCTCCCAATTTATG+GGG - Chr7:87907307-87907326 None:intergenic 40.0%
GAATGATCCAGCATAATGCT+TGG + Chr7:87908470-87908489 MsG0780041191.01.T01:CDS 40.0%
GCACAATGAGGCAAATAATG+AGG + Chr7:87909411-87909430 MsG0780041191.01.T01:three_prime_UTR 40.0%
GCTAATTACCATGCTTGATG+AGG + Chr7:87906248-87906267 MsG0780041191.01.T01:CDS 40.0%
GCTTTCTGAGCTTCATGAAT+AGG - Chr7:87907586-87907605 None:intergenic 40.0%
GGATTTGGACAATACCCAAT+TGG + Chr7:87909514-87909533 MsG0780041191.01.T01:three_prime_UTR 40.0%
GTGAACTAGCTCCCAATTTA+TGG - Chr7:87907309-87907328 None:intergenic 40.0%
GTGCCTCTATACCTTAGATT+TGG - Chr7:87907354-87907373 None:intergenic 40.0%
GTTGAATTGGGTAAGAAGAG+TGG + Chr7:87906075-87906094 MsG0780041191.01.T01:CDS 40.0%
TCCAACACTCAACAATTCGT+TGG + Chr7:87905719-87905738 MsG0780041191.01.T01:five_prime_UTR 40.0%
TCTCTCTAGTAGAGCCTATT+TGG + Chr7:87907385-87907404 MsG0780041191.01.T01:intron 40.0%
TCTCTGGTACCCCATAAATT+GGG + Chr7:87907295-87907314 MsG0780041191.01.T01:intron 40.0%
TCTTTCAGGCAATCCTCTTT+GGG - Chr7:87908500-87908519 None:intergenic 40.0%
TGAGATTGTTTGCAGTGCAA+GGG - Chr7:87908293-87908312 None:intergenic 40.0%
TGCATAAGTTCATGGTTCCT+TGG - Chr7:87909364-87909383 None:intergenic 40.0%
TGTGTATATACCTGGTGTGA+CGG - Chr7:87904872-87904891 None:intergenic 40.0%
TTACAAGATCATGAAGCACG+TGG + Chr7:87904836-87904855 MsG0780041191.01.T01:five_prime_UTR 40.0%
TTCTCTGGTACCCCATAAAT+TGG + Chr7:87907294-87907313 MsG0780041191.01.T01:intron 40.0%
TTGAGATTGTTTGCAGTGCA+AGG - Chr7:87908294-87908313 None:intergenic 40.0%
TTGGGTGGTATACAAGTCTT+AGG + Chr7:87907247-87907266 MsG0780041191.01.T01:intron 40.0%
! AACAAGTGTTTGAAGTCCGT+CGG - Chr7:87905555-87905574 None:intergenic 40.0%
! AACTGTGCAGCAAACCTTTT+TGG - Chr7:87909757-87909776 None:intergenic 40.0%
! ACCCAATTGGTGATATTGGT+AGG + Chr7:87909527-87909546 MsG0780041191.01.T01:three_prime_UTR 40.0%
! ACTGTGCAGCAAACCTTTTT+GGG - Chr7:87909756-87909775 None:intergenic 40.0%
! AGCAACAGAGAGAACTTTTG+AGG - Chr7:87904266-87904285 None:intergenic 40.0%
! CATTATTGTTGACGGGTACA+TGG + Chr7:87905284-87905303 MsG0780041191.01.T01:intron 40.0%
! GCAACAGAGAGAACTTTTGA+GGG - Chr7:87904265-87904284 None:intergenic 40.0%
! GTGAACAGTGGTGTTGAATT+GGG + Chr7:87906063-87906082 MsG0780041191.01.T01:CDS 40.0%
! TAGAAAAGTGTACTTACGGG+TGG - Chr7:87908564-87908583 None:intergenic 40.0%
! TCTGAAATCCAATCAAGTGG+TGG + Chr7:87905521-87905540 MsG0780041191.01.T01:five_prime_UTR 40.0%
! TGTGAACAGTGGTGTTGAAT+TGG + Chr7:87906062-87906081 MsG0780041191.01.T01:CDS 40.0%
! TTTTGTTACAAGCCACCCTT+TGG - Chr7:87906548-87906567 None:intergenic 40.0%
!! AATTGTTGAGTGTTGGAAGG+TGG - Chr7:87905716-87905735 None:intergenic 40.0%
!! ACCTTTAGGTTCTGTTTCTG+AGG - Chr7:87909179-87909198 None:intergenic 40.0%
!! ACGAATTGTTGAGTGTTGGA+AGG - Chr7:87905719-87905738 None:intergenic 40.0%
!! AGATATAGTTGGTGGAAGGA+AGG + Chr7:87907554-87907573 MsG0780041191.01.T01:intron 40.0%
!! GCTTTTGGAAATGTCTTGTG+TGG - Chr7:87909209-87909228 None:intergenic 40.0%
!! GGAAACGGGTTATGATAATC+TGG + Chr7:87907002-87907021 MsG0780041191.01.T01:intron 40.0%
!! TGCACATGAGCTTTTAGAAG+AGG + Chr7:87906032-87906051 MsG0780041191.01.T01:CDS 40.0%
!! TTCCAAGGTGTTGAATTGGA+GGG - Chr7:87906956-87906975 None:intergenic 40.0%
!! TTTCCAAGGTGTTGAATTGG+AGG - Chr7:87906957-87906976 None:intergenic 40.0%
!!! GGTTTTTTAGGACTTCCTTG+TGG - Chr7:87909343-87909362 None:intergenic 40.0%
AACTCCATGCACGTCCAAAT+AGG - Chr7:87907402-87907421 None:intergenic 45.0%
ACAGTACCACCATCAAATGG+AGG + Chr7:87908210-87908229 MsG0780041191.01.T01:CDS 45.0%
AGAGAGAGAGAGAGAGAGAA+TGG - Chr7:87904232-87904251 None:intergenic 45.0%
ATACCACCCAACATTGGAGA+TGG - Chr7:87907238-87907257 None:intergenic 45.0%
ATGGCAACGTACTATCATGG+TGG + Chr7:87905494-87905513 MsG0780041191.01.T01:five_prime_UTR 45.0%
ATGGGATGAGATAGATGGGT+TGG + Chr7:87910022-87910041 MsG0780041191.01.T01:three_prime_UTR 45.0%
CACACATGCAGTACAACCAA+TGG + Chr7:87905815-87905834 MsG0780041191.01.T01:intron 45.0%
CAGACAGTACCACCATCAAA+TGG + Chr7:87908207-87908226 MsG0780041191.01.T01:CDS 45.0%
CCAATGGCAACGTACTATCA+TGG + Chr7:87905491-87905510 MsG0780041191.01.T01:five_prime_UTR 45.0%
CCACAAACATCACCACTTGT+TGG + Chr7:87909259-87909278 MsG0780041191.01.T01:three_prime_UTR 45.0%
CCATGATAGTACGTTGCCAT+TGG - Chr7:87905494-87905513 None:intergenic 45.0%
CGATAGAAAAACTGGGAGAG+TGG - Chr7:87906851-87906870 None:intergenic 45.0%
CTTTCAATATCCGTCACACC+AGG + Chr7:87904859-87904878 MsG0780041191.01.T01:five_prime_UTR 45.0%
CTTTCAGGCAATCCTCTTTG+GGG - Chr7:87908499-87908518 None:intergenic 45.0%
GAAATCCAATCAAGTGGTGG+CGG + Chr7:87905524-87905543 MsG0780041191.01.T01:five_prime_UTR 45.0%
GAACACAATTGACCCCAACA+CGG + Chr7:87905837-87905856 MsG0780041191.01.T01:CDS 45.0%
GAACTAGAAGGGATACCACA+AGG + Chr7:87909325-87909344 MsG0780041191.01.T01:three_prime_UTR 45.0%
GAATTGGGTAAGAAGAGTGG+TGG + Chr7:87906078-87906097 MsG0780041191.01.T01:CDS 45.0%
GACGTTGTACCTTCTTTGCA+TGG + Chr7:87905785-87905804 MsG0780041191.01.T01:five_prime_UTR 45.0%
GAGGTTGTGAATGTGAACAG+TGG + Chr7:87906051-87906070 MsG0780041191.01.T01:CDS 45.0%
GCCAACGAATTGTTGAGTGT+TGG - Chr7:87905723-87905742 None:intergenic 45.0%
GGAGATGGATCAATCATTGG+TGG + Chr7:87906150-87906169 MsG0780041191.01.T01:CDS 45.0%
GGAGGAGATGGATCAATCAT+TGG + Chr7:87906147-87906166 MsG0780041191.01.T01:CDS 45.0%
TAAAAGACACCACCAAAGGG+TGG + Chr7:87906533-87906552 MsG0780041191.01.T01:intron 45.0%
TACCCTCCAATTCAACACCT+TGG + Chr7:87906951-87906970 MsG0780041191.01.T01:intron 45.0%
TGAAGGAAGCCATGCAAAGA+AGG - Chr7:87905797-87905816 None:intergenic 45.0%
TGGGGTCAATTGTGTTCCAT+TGG - Chr7:87905834-87905853 None:intergenic 45.0%
TGGTTGTACTGCATGTGTGA+AGG - Chr7:87905814-87905833 None:intergenic 45.0%
TGTGGGTGTGGGAATTAGAA+AGG + Chr7:87905380-87905399 MsG0780041191.01.T01:intron 45.0%
TTGGGTGAAGAGGATTGCTT+TGG + Chr7:87908373-87908392 MsG0780041191.01.T01:CDS 45.0%
! AAAAGTGTACTTACGGGTGG+AGG - Chr7:87908561-87908580 None:intergenic 45.0%
! CCAACAAGTGGTGATGTTTG+TGG - Chr7:87909262-87909281 None:intergenic 45.0%
! GCAAAGAAGGTACAACGTCA+TGG - Chr7:87905784-87905803 None:intergenic 45.0%
! TGGTTGTGTTTTGTGGGTGT+GGG + Chr7:87905369-87905388 MsG0780041191.01.T01:intron 45.0%
! TTGGTAGTAACACCAGAAGC+CGG - Chr7:87905958-87905977 None:intergenic 45.0%
!! AAGGTGTTGAATTGGAGGGT+AGG - Chr7:87906952-87906971 None:intergenic 45.0%
!! AGTTAGGCTTTGGAAGCCAA+TGG + Chr7:87909034-87909053 MsG0780041191.01.T01:CDS 45.0%
!! CTGTTTCTGTTCTTCGTGCT+TGG + Chr7:87908521-87908540 MsG0780041191.01.T01:CDS 45.0%
!! GAATCATCAGGTGTTGGTAG+TGG + Chr7:87906126-87906145 MsG0780041191.01.T01:CDS 45.0%
!! GGTGAGAGCTTTTTCTTGAG+AGG - Chr7:87909158-87909177 None:intergenic 45.0%
!! TGGATCAATCATTGGTGGTG+CGG + Chr7:87906155-87906174 MsG0780041191.01.T01:CDS 45.0%
!! AAAATCTATAAAATAAATTA+GGG - Chr7:87906571-87906590 None:intergenic 5.0%
!! TAAAATCTATAAAATAAATT+AGG - Chr7:87906572-87906591 None:intergenic 5.0%
!!! ATTTTTTTAGATTAATTTTT+TGG + Chr7:87906336-87906355 MsG0780041191.01.T01:intron 5.0%
AACAGGGCTTACTAGGAGTC+AGG + Chr7:87908874-87908893 MsG0780041191.01.T01:CDS 50.0%
AATGCTTGGAGACCCCAAAG+AGG + Chr7:87908484-87908503 MsG0780041191.01.T01:CDS 50.0%
AGAGCCTATTTGGACGTGCA+TGG + Chr7:87907395-87907414 MsG0780041191.01.T01:intron 50.0%
ATACACCACGCGCTCAACAA+GGG + Chr7:87905869-87905888 MsG0780041191.01.T01:CDS 50.0%
CACAGTCAATGGTACGAACG+TGG + Chr7:87907072-87907091 MsG0780041191.01.T01:intron 50.0%
CCACAACCTCCATTTGATGG+TGG - Chr7:87908219-87908238 None:intergenic 50.0%
CCACCATCAAATGGAGGTTG+TGG + Chr7:87908216-87908235 MsG0780041191.01.T01:CDS 50.0%
GAGCTCAGAATCTGAATCCC+CGG - Chr7:87905997-87906016 None:intergenic 50.0%
GGTGAAGAGGATTGCTTTGG+AGG + Chr7:87908376-87908395 MsG0780041191.01.T01:CDS 50.0%
GTTGGTTGAAGGTGGAGCAA+AGG + Chr7:87908182-87908201 MsG0780041191.01.T01:intron 50.0%
TCATCGTTCGAACAAGCTGC+CGG + Chr7:87908241-87908260 MsG0780041191.01.T01:CDS 50.0%
TGTTACAAGCCACCCTTTGG+TGG - Chr7:87906545-87906564 None:intergenic 50.0%
TTCGAACAAGCTGCCGGAAT+CGG + Chr7:87908247-87908266 MsG0780041191.01.T01:CDS 50.0%
TTGGGTAAGAAGAGTGGTGG+TGG + Chr7:87906081-87906100 MsG0780041191.01.T01:CDS 50.0%
! AAGTGTTTGAAGTCCGTCGG+CGG - Chr7:87905552-87905571 None:intergenic 50.0%
! GTGGTTGTGTTTTGTGGGTG+TGG + Chr7:87905368-87905387 MsG0780041191.01.T01:intron 50.0%
!! ATCAATCATTGGTGGTGCGG+AGG + Chr7:87906158-87906177 MsG0780041191.01.T01:CDS 50.0%
!! CGTGGATTTGGTGTTGTTGG+TGG - Chr7:87905757-87905776 None:intergenic 50.0%
!! GAGTGGTGGTGGAATAAGCA+AGG + Chr7:87906092-87906111 MsG0780041191.01.T01:CDS 50.0%
!! GGAGTTGTTTTCTGCTGCTG+TGG - Chr7:87905678-87905697 None:intergenic 50.0%
!! TAGGCTTTGGAAGCCAATGG+TGG + Chr7:87909037-87909056 MsG0780041191.01.T01:CDS 50.0%
!! TCAATCATTGGTGGTGCGGA+GGG + Chr7:87906159-87906178 MsG0780041191.01.T01:CDS 50.0%
!! TCATCAGGTGTTGGTAGTGG+AGG + Chr7:87906129-87906148 MsG0780041191.01.T01:CDS 50.0%
AAGGGCAGTGTATGTCCTCG+CGG - Chr7:87908275-87908294 None:intergenic 55.0%
AGGCCATCTCCAATGTTGGG+TGG + Chr7:87907232-87907251 MsG0780041191.01.T01:intron 55.0%
AGGGAGGCCATCTCCAATGT+TGG + Chr7:87907228-87907247 MsG0780041191.01.T01:intron 55.0%
CACAATTGACCCCAACACGG+TGG + Chr7:87905840-87905859 MsG0780041191.01.T01:CDS 55.0%
GATACACCACGCGCTCAACA+AGG + Chr7:87905868-87905887 MsG0780041191.01.T01:CDS 55.0%
GGGAGGCCATCTCCAATGTT+GGG + Chr7:87907229-87907248 MsG0780041191.01.T01:intron 55.0%
GGGGTCTCCAAGCATTATGC+TGG - Chr7:87908480-87908499 None:intergenic 55.0%
GTAACACCAGAAGCCGGAGA+CGG - Chr7:87905952-87905971 None:intergenic 55.0%
!! GCGCGTGGATTTGGTGTTGT+TGG - Chr7:87905760-87905779 None:intergenic 55.0%
!! GGTGTTGGTAGTGGAGGAGA+TGG + Chr7:87906135-87906154 MsG0780041191.01.T01:CDS 55.0%
!! TGGTGTTGTTGGTGGCTGAG+AGG - Chr7:87905749-87905768 None:intergenic 55.0%
CAACCTTCTCATGCCGCGAC+CGG + Chr7:87905632-87905651 MsG0780041191.01.T01:five_prime_UTR 60.0%
CGTCATGGTGCGCGTGGATT+TGG - Chr7:87905769-87905788 None:intergenic 60.0%
GTACAACGTCATGGTGCGCG+TGG - Chr7:87905775-87905794 None:intergenic 60.0%
GTATCACGCGCCACCGTGTT+GGG - Chr7:87905853-87905872 None:intergenic 60.0%
TATCACGCGCCACCGTGTTG+GGG - Chr7:87905852-87905871 None:intergenic 60.0%
TGTATCACGCGCCACCGTGT+TGG - Chr7:87905854-87905873 None:intergenic 60.0%
TTACCGGTCGCGGCATGAGA+AGG - Chr7:87905638-87905657 None:intergenic 60.0%
! TGTCCTCGCGGAACCGATTC+CGG - Chr7:87908263-87908282 None:intergenic 60.0%
!! ATTGGTGGTGCGGAGGGAAG+TGG + Chr7:87906165-87906184 MsG0780041191.01.T01:CDS 60.0%
AGGTGGCGCGTGAGGTGAGA+AGG - Chr7:87905699-87905718 None:intergenic 65.0%
GACAGCCCTTGTTGAGCGCG+TGG - Chr7:87905877-87905896 None:intergenic 65.0%
GTCTGGTGGTTCGCCGTCTC+CGG + Chr7:87905936-87905955 MsG0780041191.01.T01:CDS 65.0%
GTGTTGGAAGGTGGCGCGTG+AGG - Chr7:87905707-87905726 None:intergenic 65.0%
CGGCGCCGCCACCACTTGAT+TGG - Chr7:87905532-87905551 None:intergenic 70.0%
GGTTCGCCGTCTCCGGCTTC+TGG + Chr7:87905943-87905962 MsG0780041191.01.T01:CDS 70.0%
! CTGCCGGAATCGGTTCCGCG+AGG + Chr7:87908257-87908276 MsG0780041191.01.T01:CDS 70.0%
!!! AGTGGTGGCGGCGCCGCCGA+CGG + Chr7:87905536-87905555 MsG0780041191.01.T01:five_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 87904173 87910171 87904173 ID=MsG0780041191.01;Name=MsG0780041191.01
Chr7 mRNA 87904173 87910171 87904173 ID=MsG0780041191.01.T01;Parent=MsG0780041191.01;Name=MsG0780041191.01.T01;_AED=0.27;_eAED=0.27;_QI=628|1|1|1|0.6|0.5|6|1020|342
Chr7 exon 87904173 87904379 87904173 ID=MsG0780041191.01.T01:exon:3282;Parent=MsG0780041191.01.T01
Chr7 five_prime_UTR 87904173 87904379 87904173 ID=MsG0780041191.01.T01:five_prime_utr;Parent=MsG0780041191.01.T01
Chr7 five_prime_UTR 87904830 87904880 87904830 ID=MsG0780041191.01.T01:five_prime_utr;Parent=MsG0780041191.01.T01
Chr7 five_prime_UTR 87905450 87905819 87905450 ID=MsG0780041191.01.T01:five_prime_utr;Parent=MsG0780041191.01.T01
Chr7 CDS 87905820 87906269 87905820 ID=MsG0780041191.01.T01:cds;Parent=MsG0780041191.01.T01
Chr7 CDS 87908193 87908566 87908193 ID=MsG0780041191.01.T01:cds;Parent=MsG0780041191.01.T01
Chr7 CDS 87908835 87908895 87908835 ID=MsG0780041191.01.T01:cds;Parent=MsG0780041191.01.T01
Chr7 CDS 87909008 87909151 87909008 ID=MsG0780041191.01.T01:cds;Parent=MsG0780041191.01.T01
Chr7 three_prime_UTR 87909152 87910171 87909152 ID=MsG0780041191.01.T01:three_prime_utr;Parent=MsG0780041191.01.T01
Chr7 mRNA 87904669 87910171 87904669 ID=MsG0780041191.01.T02;Parent=MsG0780041191.01;Name=MsG0780041191.01.T02;_AED=0.29;_eAED=0.29;_QI=477|1|1|1|0.6|0.5|6|1020|342
Chr7 exon 87904669 87904724 87904669 ID=MsG0780041191.01.T02:exon:3288;Parent=MsG0780041191.01.T02
Chr7 five_prime_UTR 87904669 87904724 87904669 ID=MsG0780041191.01.T02:five_prime_utr;Parent=MsG0780041191.01.T02
Chr7 five_prime_UTR 87904830 87904880 87904830 ID=MsG0780041191.01.T02:five_prime_utr;Parent=MsG0780041191.01.T02
Chr7 five_prime_UTR 87905450 87905819 87905450 ID=MsG0780041191.01.T02:five_prime_utr;Parent=MsG0780041191.01.T02
Chr7 CDS 87905820 87906269 87905820 ID=MsG0780041191.01.T02:cds;Parent=MsG0780041191.01.T02
Chr7 CDS 87908193 87908566 87908193 ID=MsG0780041191.01.T02:cds;Parent=MsG0780041191.01.T02
Chr7 CDS 87908835 87908895 87908835 ID=MsG0780041191.01.T02:cds;Parent=MsG0780041191.01.T02
Chr7 CDS 87909008 87909151 87909008 ID=MsG0780041191.01.T02:cds;Parent=MsG0780041191.01.T02
Chr7 three_prime_UTR 87909152 87910171 87909152 ID=MsG0780041191.01.T02:three_prime_utr;Parent=MsG0780041191.01.T02
Gene Sequence

>MsG0780041191.01.T02

ATGCAGTACAACCAATGGAACACAATTGACCCCAACACGGTGGCGCGTGATACACCACGCGCTCAACAAGGGCTGTCTCTTAGTCTCTCTTCACAGCCAGCAAGATTTGTTTCTATGTCTGGTGGTTCGCCGTCTCCGGCTTCTGGTGTTACTACCAATAATAACAATGGGAATCCGGGGATTCAGATTCTGAGCTCCAAATATTTAAGGGCTGCACATGAGCTTTTAGAAGAGGTTGTGAATGTGAACAGTGGTGTTGAATTGGGTAAGAAGAGTGGTGGTGGAATAAGCAAGGTGAATATTGGAGAATCATCAGGTGTTGGTAGTGGAGGAGATGGATCAATCATTGGTGGTGCGGAGGGAAGTGGAAAACGTAGCTCTGAACTATCAACAGCTGAAAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTACCACCATCAAATGGAGGTTGTGGTTTCATCGTTCGAACAAGCTGCCGGAATCGGTTCCGCGAGGACATACACTGCCCTTGCACTGCAAACAATCTCAAAGCAGTTTCGGTGTTTGAAAGATGCAATAACAGGACAAATAAAAGCTACAAATAAGAGCTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATTTGTTGATCATCAACTACGTCAACAACGTGCTTTACAACAGTTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTCCACCCCTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTTTCAAATTGGTTTATAAATGCTAGAGTTAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACGTAGAAGAAATGAAGGAAAATGAACTAAATGGATCTGAGGATAAACAAAGCAAGAGCAATGAAGATTCTTCAATGAAATAA

>MsG0780041191.01.T01

ATGCAGTACAACCAATGGAACACAATTGACCCCAACACGGTGGCGCGTGATACACCACGCGCTCAACAAGGGCTGTCTCTTAGTCTCTCTTCACAGCCAGCAAGATTTGTTTCTATGTCTGGTGGTTCGCCGTCTCCGGCTTCTGGTGTTACTACCAATAATAACAATGGGAATCCGGGGATTCAGATTCTGAGCTCCAAATATTTAAGGGCTGCACATGAGCTTTTAGAAGAGGTTGTGAATGTGAACAGTGGTGTTGAATTGGGTAAGAAGAGTGGTGGTGGAATAAGCAAGGTGAATATTGGAGAATCATCAGGTGTTGGTAGTGGAGGAGATGGATCAATCATTGGTGGTGCGGAGGGAAGTGGAAAACGTAGCTCTGAACTATCAACAGCTGAAAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTACCACCATCAAATGGAGGTTGTGGTTTCATCGTTCGAACAAGCTGCCGGAATCGGTTCCGCGAGGACATACACTGCCCTTGCACTGCAAACAATCTCAAAGCAGTTTCGGTGTTTGAAAGATGCAATAACAGGACAAATAAAAGCTACAAATAAGAGCTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATTTGTTGATCATCAACTACGTCAACAACGTGCTTTACAACAGTTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTCCACCCCTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTTTCAAATTGGTTTATAAATGCTAGAGTTAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACGTAGAAGAAATGAAGGAAAATGAACTAAATGGATCTGAGGATAAACAAAGCAAGAGCAATGAAGATTCTTCAATGAAATAA

Protein sequence

>MsG0780041191.01.T02

MQYNQWNTIDPNTVARDTPRAQQGLSLSLSSQPARFVSMSGGSPSPASGVTTNNNNGNPGIQILSSKYLRAAHELLEEVVNVNSGVELGKKSGGGISKVNIGESSGVGSGGDGSIIGGAEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKFVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKENELNGSEDKQSKSNEDSSMK*

>MsG0780041191.01.T01

MQYNQWNTIDPNTVARDTPRAQQGLSLSLSSQPARFVSMSGGSPSPASGVTTNNNNGNPGIQILSSKYLRAAHELLEEVVNVNSGVELGKKSGGGISKVNIGESSGVGSGGDGSIIGGAEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKFVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKENELNGSEDKQSKSNEDSSMK*