AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023176.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023176.01.T01 MTR_8g088600 97.448 431 8 2 1 429 1 430 0.0 841
MsG0480023176.01.T01 MTR_8g088600 45.930 172 91 1 70 239 304 475 1.85e-39 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023176.01.T01 AT2G31810 77.839 361 80 0 69 429 81 441 0.0 589
MsG0480023176.01.T01 AT2G31810 38.418 177 82 4 70 244 315 466 4.12e-27 113
MsG0480023176.01.T01 AT2G31810 77.562 361 81 0 69 429 81 441 0.0 587
MsG0480023176.01.T01 AT2G31810 44.633 177 93 3 70 244 315 488 3.31e-39 147
MsG0480023176.01.T01 AT5G16290 63.048 433 152 3 1 429 1 429 0.0 548
MsG0480023176.01.T01 AT5G16290 43.931 173 93 3 70 239 303 474 3.63e-38 144
MsG0480023176.01.T01 AT5G16290 63.048 433 152 3 1 429 1 429 0.0 548
MsG0480023176.01.T01 AT5G16290 43.931 173 93 3 70 239 303 474 3.63e-38 144
MsG0480023176.01.T01 AT2G31810 75.964 337 80 1 94 429 35 371 0.0 531
MsG0480023176.01.T01 AT2G31810 43.820 178 94 4 70 244 244 418 8.10e-37 140

Find 115 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGAAATTTCGGCAAGTT+TGG 0.241618 4:+81822794 MsG0480023176.01.T01:CDS
TACATACCTCAGCACGGTTT+TGG 0.261925 4:-81821653 None:intergenic
CTGTGTATGTTACAGGTTAC+TGG 0.276804 4:+81822746 MsG0480023176.01.T01:intron
TCGGCTTACAACTGTGGTTC+CGG 0.280343 4:+81825618 MsG0480023176.01.T01:CDS
GGAGTTCTAAACATTGTTAC+AGG 0.294864 4:+81825405 MsG0480023176.01.T01:CDS
TAGAAGGGGCTATAACATTC+AGG 0.328690 4:+81825437 MsG0480023176.01.T01:CDS
TTGTTGTTTCTGGTACTGAT+AGG 0.341983 4:+81821389 MsG0480023176.01.T01:CDS
ACAGCTATTAATGCTCTTGT+TGG 0.343686 4:+81823059 MsG0480023176.01.T01:CDS
CAAACTTGCCGAAATTTCTC+TGG 0.350301 4:-81822793 None:intergenic
ACGTCGTGCAGCAGCATTTA+CGG 0.355458 4:-81826610 None:intergenic
GCAGCTGAATACCGCCAAAA+TGG 0.358419 4:-81823011 None:intergenic
TTACAGGAGTCTTTGCTAGA+AGG 0.359381 4:+81825421 MsG0480023176.01.T01:CDS
GTTGCAGTCCAGAGAAATTT+CGG 0.367538 4:+81822785 MsG0480023176.01.T01:CDS
CGGCTTACAACTGTGGTTCC+GGG 0.378969 4:+81825619 MsG0480023176.01.T01:CDS
TGGACTGCAACCATCTTCCC+TGG 0.383234 4:-81822773 None:intergenic
GTGAATTTGAAGGTTTGAAT+TGG 0.384473 4:-81820970 None:intergenic
CTATCCGCCGCTGCTACTTC+CGG 0.386617 4:+81821090 MsG0480023176.01.T01:CDS
AGTTCGGAGACACACGATTT+CGG 0.388982 4:+81821249 MsG0480023176.01.T01:CDS
TGGGTGCATCTGCTCCATTT+TGG 0.409790 4:+81822997 MsG0480023176.01.T01:CDS
AAACTGTCTGAAGGCTCTAT+AGG 0.416760 4:-81824209 None:intergenic
AAGAAGAGTGTGGTTGAGTT+AGG 0.422657 4:-81821027 None:intergenic
ATTAAAGAAATAGCTAGAAC+TGG 0.427203 4:+81822818 MsG0480023176.01.T01:CDS
GGAAGATTCCGTTACGATTG+AGG 0.430766 4:+81821805 MsG0480023176.01.T01:CDS
ATACTTAGATTGCATTAAGA+AGG 0.430892 4:+81822967 MsG0480023176.01.T01:intron
ATCAGAATGAGTGAATTTGA+AGG 0.435459 4:-81820980 None:intergenic
TGCATTAAGAAGGGAAAAGA+TGG 0.440203 4:+81822977 MsG0480023176.01.T01:CDS
TGTTGTTTCTGGTACTGATA+GGG 0.451855 4:+81821390 MsG0480023176.01.T01:CDS
ATCAATTCTCGCTCAGCAAA+TGG 0.465555 4:-81826573 None:intergenic
GGAATGATTAACAGAATAGC+TGG 0.467756 4:+81821292 MsG0480023176.01.T01:CDS
AACTTCAGTATTTGTATCAC+TGG 0.472806 4:-81820865 None:intergenic
TACTGGGGACCCAGGGAAGA+TGG 0.476333 4:+81822763 MsG0480023176.01.T01:CDS
TCGCCATGGTTATGAGGAAA+TGG 0.477002 4:-81820936 None:intergenic
TTGCGGCGGGAAGTGGTAGG+TGG 0.477477 4:-81821051 None:intergenic
GGTTGAGATGGAAATGAAGA+TGG 0.478019 4:-81821006 None:intergenic
GTTGTTGTTGCGGCGGGAAG+TGG 0.481135 4:-81821058 None:intergenic
CTGTTGGTTTGAATCAAGAC+AGG 0.482756 4:+81821353 MsG0480023176.01.T01:CDS
GTGTTCGTTGGCGATGAGAG+TGG 0.490996 4:+81821271 MsG0480023176.01.T01:CDS
CGGAAGTAGCAGCGGCGGAT+AGG 0.491359 4:-81821089 None:intergenic
AGCTAAGATCGTGGACATCT+CGG 0.492079 4:+81821784 MsG0480023176.01.T01:CDS
ATGCTTGTGAATGATGCTCC+TGG 0.493572 4:+81825384 MsG0480023176.01.T01:CDS
TTGGGAATACACAGATTAAG+TGG 0.503166 4:+81821744 MsG0480023176.01.T01:intron
GTAACAATGTTTAGAACTCC+AGG 0.504311 4:-81825402 None:intergenic
CTCGAGGGTTATTGTGTGAT+CGG 0.508506 4:-81826682 None:intergenic
GTGTGGTCGCCATGGTTATG+AGG 0.508624 4:-81820942 None:intergenic
AGCTTTAGCCCTGAAAATGC+TGG 0.513506 4:-81826649 None:intergenic
TCAAGTACTTGATGCTCAGT+GGG 0.515705 4:+81824241 MsG0480023176.01.T01:CDS
TGTGTATGTTACAGGTTACT+GGG 0.517564 4:+81822747 MsG0480023176.01.T01:intron
AACATTGAGTCATTAGCTGT+TGG 0.517994 4:+81821337 MsG0480023176.01.T01:CDS
CACACGATTTCGGTGTTCGT+TGG 0.523203 4:+81821259 MsG0480023176.01.T01:CDS
ATCAATTCACGTTCTACTTG+AGG 0.525082 4:-81821606 None:intergenic
TACAGGAGTCTTTGCTAGAA+GGG 0.525094 4:+81825422 MsG0480023176.01.T01:CDS
GCAGCAATTGAATAAGTTAG+TGG 0.527818 4:+81825669 MsG0480023176.01.T01:CDS
GCTTTGAACGAGAAGGTGAA+GGG 0.528204 4:-81821143 None:intergenic
AGGGCCATTGGAGGAGACTG+TGG 0.528980 4:-81821118 None:intergenic
TGCTTTGAACGAGAAGGTGA+AGG 0.529153 4:-81821144 None:intergenic
ATCAAGTACTTGATGCTCAG+TGG 0.532325 4:+81824240 MsG0480023176.01.T01:CDS
GGACTGCAACCATCTTCCCT+GGG 0.533876 4:-81822772 None:intergenic
GGAGGAGACTGTGGTGTCAC+CGG 0.537617 4:-81821109 None:intergenic
GTGGTTGAGTTAGGTTGAGA+TGG 0.548379 4:-81821018 None:intergenic
GTCCACGATCTTAGCTCTGA+AGG 0.550488 4:-81821777 None:intergenic
GCTTCGTATCCAGATCTTGA+GGG 0.557075 4:+81823032 MsG0480023176.01.T01:CDS
TAGCAGCGGCGGATAGGATG+AGG 0.559992 4:-81821083 None:intergenic
TGCTTCGTATCCAGATCTTG+AGG 0.559999 4:+81823031 MsG0480023176.01.T01:CDS
ATGGCAAGTGGGTTATATCC+CGG 0.560667 4:-81826554 None:intergenic
TGCGGCGGGAAGTGGTAGGT+GGG 0.561065 4:-81821050 None:intergenic
GGATGAGGTTGTTGTTGTTG+CGG 0.561137 4:-81821068 None:intergenic
TTGTTGCGGCGGGAAGTGGT+AGG 0.561752 4:-81821054 None:intergenic
GAATACACAGATTAAGTGGT+TGG 0.566164 4:+81821748 MsG0480023176.01.T01:intron
CTGATTGACTCATCTGTACC+CGG 0.567540 4:-81825637 None:intergenic
CTCGCTCAGCAAATGGCAAG+TGG 0.570261 4:-81826566 None:intergenic
CAGAAGTTGAAGGAATCTCT+CGG 0.572266 4:+81825599 MsG0480023176.01.T01:CDS
TACTTAGATTGCATTAAGAA+GGG 0.573249 4:+81822968 MsG0480023176.01.T01:intron
ATGAGGAAATGGAGAAGAAG+CGG 0.575019 4:-81820925 None:intergenic
GAGGTTGTTGTTGTTGCGGC+GGG 0.575525 4:-81821064 None:intergenic
TGGAGTTTGTGTGGTCGCCA+TGG 0.576273 4:-81820950 None:intergenic
GACACCACAGTCTCCTCCAA+TGG 0.580017 4:+81821114 MsG0480023176.01.T01:CDS
AGAAATAGCTAGAACTGGAA+AGG 0.583246 4:+81822823 MsG0480023176.01.T01:CDS
GCTGGAGTGTTTGCGAGAAG+AGG 0.583816 4:+81821310 MsG0480023176.01.T01:CDS
AATACTTGCTTTGAACGAGA+AGG 0.587781 4:-81821150 None:intergenic
TCTCCATTTCCTCATAACCA+TGG 0.591552 4:+81820933 MsG0480023176.01.T01:exon
TTACAGGTTACTGGGGACCC+AGG 0.591748 4:+81822755 MsG0480023176.01.T01:intron
ACAGGAGTCTTTGCTAGAAG+GGG 0.592633 4:+81825423 MsG0480023176.01.T01:CDS
AGATGAGTCAATCAGCAAGT+TGG 0.595540 4:+81825645 MsG0480023176.01.T01:CDS
TACACAGATTAAGTGGTTGG+TGG 0.600558 4:+81821751 MsG0480023176.01.T01:intron
TATTTCCAGAGTTTAGCTGT+AGG 0.601110 4:+81825571 MsG0480023176.01.T01:intron
ACAGTACAGTTGTGCTGTGG+CGG 0.615174 4:-81820888 None:intergenic
TACAGGTTACTGGGGACCCA+GGG 0.618439 4:+81822756 MsG0480023176.01.T01:intron
GTAGGACATTCAGAAGTTGA+AGG 0.623086 4:+81825589 MsG0480023176.01.T01:CDS
TGAGGTTGTTGTTGTTGCGG+CGG 0.624022 4:-81821065 None:intergenic
GTCACCGGAAGTAGCAGCGG+CGG 0.625618 4:-81821094 None:intergenic
TGACAAAACTGATACGCCTG+TGG 0.633286 4:+81823103 MsG0480023176.01.T01:CDS
CAAAACTGATACGCCTGTGG+GGG 0.635833 4:+81823106 MsG0480023176.01.T01:CDS
AGCAATGACCTCAATCGTAA+CGG 0.635927 4:-81821813 None:intergenic
GGTTTGAATTGGAGTTTGTG+TGG 0.636143 4:-81820959 None:intergenic
TGTTGGTTTGAATCAAGACA+GGG 0.639032 4:+81821354 MsG0480023176.01.T01:CDS
TAAGTTAGTGGAGCTGCATG+AGG 0.641559 4:+81825681 MsG0480023176.01.T01:CDS
AATCTCTCGGCTTACAACTG+TGG 0.643062 4:+81825612 MsG0480023176.01.T01:CDS
GCATTAAGAAGGGAAAAGAT+GGG 0.648061 4:+81822978 MsG0480023176.01.T01:CDS
TCGCTCAGCAAATGGCAAGT+GGG 0.649088 4:-81826565 None:intergenic
GTGTATGTTACAGGTTACTG+GGG 0.653049 4:+81822748 MsG0480023176.01.T01:intron
GGTGTCACCGGAAGTAGCAG+CGG 0.653773 4:-81821097 None:intergenic
CTTTGAACGAGAAGGTGAAG+GGG 0.656113 4:-81821142 None:intergenic
GGTAGGTGGGAAGAAGAGTG+TGG 0.657973 4:-81821037 None:intergenic
GACAAAACTGATACGCCTGT+GGG 0.659876 4:+81823104 MsG0480023176.01.T01:CDS
TTGACTGTAAAACTGTCTGA+AGG 0.661413 4:-81824218 None:intergenic
CACCTTCAGAGCTAAGATCG+TGG 0.670216 4:+81821775 MsG0480023176.01.T01:CDS
GGATAATGCCTTCAGACTAG+CGG 0.672373 4:+81825339 MsG0480023176.01.T01:intron
ACAAAACTGATACGCCTGTG+GGG 0.675365 4:+81823105 MsG0480023176.01.T01:CDS
ATCAGTACCAGAAACAACAA+TGG 0.675754 4:-81821386 None:intergenic
AGATCCCCAAAACCGTGCTG+AGG 0.677253 4:+81821647 MsG0480023176.01.T01:CDS
TTTGAACGAGAAGGTGAAGG+GGG 0.683750 4:-81821141 None:intergenic
CAAGTACTTGATGCTCAGTG+GGG 0.698945 4:+81824242 MsG0480023176.01.T01:CDS
TGTAAGTACATACCTCAGCA+CGG 0.718597 4:-81821659 None:intergenic
CGATCACACAATAACCCTCG+AGG 0.724076 4:+81826683 MsG0480023176.01.T01:CDS
GAGACAGTACAGTTGTGCTG+TGG 0.745186 4:-81820891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTGTTTTATTTTTGTT+GGG + Chr4:81821726-81821745 MsG0480023176.01.T01:intron 10.0%
!!! TTAATTTGTTTTATTTTTGT+TGG + Chr4:81821725-81821744 MsG0480023176.01.T01:intron 10.0%
!! AAAGAACAGAAAAATTAAAA+CGG - Chr4:81825527-81825546 None:intergenic 15.0%
!! AAATTGATTAAAAATGTGTT+TGG + Chr4:81824823-81824842 MsG0480023176.01.T01:intron 15.0%
!! TAAAACTAATTGTAATTGAA+AGG + Chr4:81821923-81821942 MsG0480023176.01.T01:intron 15.0%
!!! ACATTTCTATTTGATATTTT+TGG + Chr4:81824423-81824442 MsG0480023176.01.T01:intron 15.0%
!!! ATATGATTTTTTAGTATTAC+TGG + Chr4:81825767-81825786 MsG0480023176.01.T01:intron 15.0%
!!! CTTATTTTAAGTATTTTTCA+TGG - Chr4:81824586-81824605 None:intergenic 15.0%
!!! TAAAAGCTAACATTTTTAAT+AGG - Chr4:81823237-81823256 None:intergenic 15.0%
!!! TACTGATTTTACAATATAAT+AGG - Chr4:81825996-81826015 None:intergenic 15.0%
!! AAAAGCAAACAGTTTATTTA+TGG - Chr4:81825741-81825760 None:intergenic 20.0%
!! AAAGCAAACAGTTTATTTAT+GGG - Chr4:81825740-81825759 None:intergenic 20.0%
!! ACAAAAAAACTTAAGGAAAA+AGG - Chr4:81823535-81823554 None:intergenic 20.0%
!! ACAAAATTGAAAATGTAGAA+AGG - Chr4:81823634-81823653 None:intergenic 20.0%
!! ACATTTCAAAAGAAAAAAGA+AGG - Chr4:81824163-81824182 None:intergenic 20.0%
!! CAAATAAATAGTGTACATAA+TGG - Chr4:81824103-81824122 None:intergenic 20.0%
!! CATTACAACAAAACATAAAA+AGG - Chr4:81824306-81824325 None:intergenic 20.0%
!! CATTATGTACACTATTTATT+TGG + Chr4:81824101-81824120 MsG0480023176.01.T01:intron 20.0%
!! GAAAAAAACAGAATTTAATG+TGG - Chr4:81826158-81826177 None:intergenic 20.0%
!! GTTAAGGTAATTATTGATAT+TGG + Chr4:81822316-81822335 MsG0480023176.01.T01:intron 20.0%
!! TCTGAAAATCACATAATAAA+AGG + Chr4:81825173-81825192 MsG0480023176.01.T01:intron 20.0%
!! TGTTAAATTAAAGAAATGCT+AGG - Chr4:81823155-81823174 None:intergenic 20.0%
!! TTTGTGAAGTAAATTATACT+AGG + Chr4:81823277-81823296 MsG0480023176.01.T01:intron 20.0%
!!! ACTAATCAATTTTGTTACTA+TGG - Chr4:81826245-81826264 None:intergenic 20.0%
!!! AGCTTTTTATTTAACTTACA+AGG + Chr4:81825056-81825075 MsG0480023176.01.T01:intron 20.0%
!!! ATAATTTGTTTGAAAGGTTA+CGG + Chr4:81823415-81823434 MsG0480023176.01.T01:intron 20.0%
!!! ATGTGGAATAAACATTATTT+TGG + Chr4:81824939-81824958 MsG0480023176.01.T01:intron 20.0%
!!! ATTTTTATATATGCAACGAA+AGG - Chr4:81822409-81822428 None:intergenic 20.0%
!!! CTAATCAATTTTGTTACTAT+GGG - Chr4:81826244-81826263 None:intergenic 20.0%
!!! GAAAATTATCATTGTTGTTA+AGG + Chr4:81822300-81822319 MsG0480023176.01.T01:intron 20.0%
!!! TCTATTTTTTTTTCTTCGAA+TGG + Chr4:81826711-81826730 MsG0480023176.01.T01:CDS 20.0%
!!! TGTTTGATAATTTGTTTGAA+AGG + Chr4:81823409-81823428 MsG0480023176.01.T01:intron 20.0%
!!! TTATTCTTTTAAGTGTGTTT+GGG + Chr4:81824789-81824808 MsG0480023176.01.T01:intron 20.0%
!!! TTTTTTTGCTAATATCTTGA+CGG + Chr4:81825019-81825038 MsG0480023176.01.T01:intron 20.0%
! AAATCACATAATAAAAGGCT+TGG + Chr4:81825178-81825197 MsG0480023176.01.T01:intron 25.0%
! AAGCAAACAGTTTATTTATG+GGG - Chr4:81825739-81825758 None:intergenic 25.0%
! AATCACATAATAAAAGGCTT+GGG + Chr4:81825179-81825198 MsG0480023176.01.T01:intron 25.0%
! AATTGAATCTTTATTGTCGT+TGG + Chr4:81823937-81823956 MsG0480023176.01.T01:intron 25.0%
! ACATAAAAAGGAGACATTTA+AGG - Chr4:81824294-81824313 None:intergenic 25.0%
! ACATCAGCATATAACTTTAA+TGG + Chr4:81825291-81825310 MsG0480023176.01.T01:intron 25.0%
! AGAGAATGAAAAGCAATATA+TGG - Chr4:81823790-81823809 None:intergenic 25.0%
! ATAACATTGAATGATGCTAA+CGG + Chr4:81824033-81824052 MsG0480023176.01.T01:intron 25.0%
! ATACTTAGATTGCATTAAGA+AGG + Chr4:81822967-81822986 MsG0480023176.01.T01:intron 25.0%
! ATTAAAGAAATAGCTAGAAC+TGG + Chr4:81822818-81822837 MsG0480023176.01.T01:CDS 25.0%
! ATTAAATACTCTCTCGAATA+AGG - Chr4:81823685-81823704 None:intergenic 25.0%
! CAAATAATAGCTATGAAATC+TGG - Chr4:81823834-81823853 None:intergenic 25.0%
! CAATATATGGGTAAATAACA+AGG - Chr4:81823777-81823796 None:intergenic 25.0%
! CATTTATAAAGCTCATAGAA+GGG - Chr4:81824709-81824728 None:intergenic 25.0%
! GAGAATGAAAAGCAATATAT+GGG - Chr4:81823789-81823808 None:intergenic 25.0%
! GCATGTAATTTCTAATTGTT+GGG + Chr4:81825318-81825337 MsG0480023176.01.T01:intron 25.0%
! GTATAATTATTTACCACAAC+AGG + Chr4:81824474-81824493 MsG0480023176.01.T01:intron 25.0%
! TACTTAGATTGCATTAAGAA+GGG + Chr4:81822968-81822987 MsG0480023176.01.T01:intron 25.0%
! TAGGTTTCATTAATAAGAGT+GGG - Chr4:81826327-81826346 None:intergenic 25.0%
! TCACACCAAAAATTAATGTT+TGG - Chr4:81824910-81824929 None:intergenic 25.0%
! TGCATGTAATTTCTAATTGT+TGG + Chr4:81825317-81825336 MsG0480023176.01.T01:intron 25.0%
! TTAAATACTCTCTCGAATAA+GGG - Chr4:81823684-81823703 None:intergenic 25.0%
! TTAGGTTTCATTAATAAGAG+TGG - Chr4:81826328-81826347 None:intergenic 25.0%
!! AAAGCATCAGAAGTATAAAA+TGG - Chr4:81826527-81826546 None:intergenic 25.0%
!! AAGAACTCTACATTCTAAAA+AGG - Chr4:81824381-81824400 None:intergenic 25.0%
!! AGAACTCTACATTCTAAAAA+GGG - Chr4:81824380-81824399 None:intergenic 25.0%
!! TTAATTGTTTGCTAGGATTT+AGG + Chr4:81821690-81821709 MsG0480023176.01.T01:intron 25.0%
!!! GTTATTCTTTTAAGTGTGTT+TGG + Chr4:81824788-81824807 MsG0480023176.01.T01:intron 25.0%
!!! TATGAAATGTTTTGAAACTG+CGG - Chr4:81824553-81824572 None:intergenic 25.0%
!!! TGCATTTATTTTAGTAGAGA+TGG - Chr4:81825711-81825730 None:intergenic 25.0%
!!! TTATTTTTGTGGTTGTGATT+GGG + Chr4:81822238-81822257 MsG0480023176.01.T01:intron 25.0%
!!! TTGATTTCTCTATTGTTTTG+TGG + Chr4:81822057-81822076 MsG0480023176.01.T01:intron 25.0%
!!! TTTATTTTTGTGGTTGTGAT+TGG + Chr4:81822237-81822256 MsG0480023176.01.T01:intron 25.0%
AAAAAATAGACTTTACCTCG+AGG - Chr4:81826701-81826720 None:intergenic 30.0%
AAAAATAGACTTTACCTCGA+GGG - Chr4:81826700-81826719 None:intergenic 30.0%
AAAATCTGTTCGTCTTTAGT+TGG - Chr4:81824008-81824027 None:intergenic 30.0%
AACTTCAGTATTTGTATCAC+TGG - Chr4:81820868-81820887 None:intergenic 30.0%
ACTTGAATGCATTTCATGAT+CGG + Chr4:81824058-81824077 MsG0480023176.01.T01:intron 30.0%
AGCAAGATTAATTATGAGGT+AGG - Chr4:81826367-81826386 None:intergenic 30.0%
AGTCAATATGAGTGATCTAA+AGG - Chr4:81823733-81823752 None:intergenic 30.0%
ATCAGAATGAGTGAATTTGA+AGG - Chr4:81820983-81821002 None:intergenic 30.0%
ATTAAATCTTCACAGATGTC+TGG - Chr4:81825216-81825235 None:intergenic 30.0%
ATTATTGATATTGGAGAGTG+TGG + Chr4:81822325-81822344 MsG0480023176.01.T01:intron 30.0%
CACCAAAAATTAATGTTTGG+TGG - Chr4:81824907-81824926 None:intergenic 30.0%
CCTCAAAGAAAAACAATTGA+GGG - Chr4:81823710-81823729 None:intergenic 30.0%
CTATGAAATCTGGTACTAAA+GGG - Chr4:81823824-81823843 None:intergenic 30.0%
GAAAAAGGTTGCATTCATAA+AGG - Chr4:81823520-81823539 None:intergenic 30.0%
GAATCTAGATGTGTATGAAT+AGG + Chr4:81822160-81822179 MsG0480023176.01.T01:intron 30.0%
GAGGAAGACAAAAAAACTTA+AGG - Chr4:81823542-81823561 None:intergenic 30.0%
GCATATCTTAATTGTTTGCT+AGG + Chr4:81821683-81821702 MsG0480023176.01.T01:intron 30.0%
GCATTTATAAAGCTCATAGA+AGG - Chr4:81824710-81824729 None:intergenic 30.0%
GCTATTCCCAATGTAATATA+AGG - Chr4:81822562-81822581 None:intergenic 30.0%
GCTCTTTCAGATTCTAATAT+CGG + Chr4:81822119-81822138 MsG0480023176.01.T01:intron 30.0%
GTATCACCAAATTGCAAAAT+GGG - Chr4:81822697-81822716 None:intergenic 30.0%
GTGAATTTGAAGGTTTGAAT+TGG - Chr4:81820973-81820992 None:intergenic 30.0%
GTGTTGAACATTTCTTATCT+GGG + Chr4:81824623-81824642 MsG0480023176.01.T01:intron 30.0%
TAAATACTCTCTCGAATAAG+GGG - Chr4:81823683-81823702 None:intergenic 30.0%
TAGGCACAAAAATGAACATA+CGG + Chr4:81825833-81825852 MsG0480023176.01.T01:intron 30.0%
TATCACCAAATTGCAAAATG+GGG - Chr4:81822696-81822715 None:intergenic 30.0%
TCAGAAAAGCAAAATCATGT+TGG - Chr4:81825158-81825177 None:intergenic 30.0%
TGATGGTAACATAATGACTT+TGG - Chr4:81822188-81822207 None:intergenic 30.0%
TGGACAAGATAAAAGAGTTA+AGG - Chr4:81822881-81822900 None:intergenic 30.0%
TGTATCACCAAATTGCAAAA+TGG - Chr4:81822698-81822717 None:intergenic 30.0%
TTAAAATCACAAACAAGCAC+AGG + Chr4:81823254-81823273 MsG0480023176.01.T01:intron 30.0%
TTCCCAATGTAATATAAGGA+CGG - Chr4:81822558-81822577 None:intergenic 30.0%
! AGCCACCAAACATTAATTTT+TGG + Chr4:81824902-81824921 MsG0480023176.01.T01:intron 30.0%
! TAGCTTTTTGCAAAACAAAC+AGG - Chr4:81822019-81822038 None:intergenic 30.0%
! TTTTTCTCTATATATGCACC+TGG + Chr4:81826172-81826191 MsG0480023176.01.T01:intron 30.0%
!! ATCAAACACGATTCTAAAGT+AGG - Chr4:81823397-81823416 None:intergenic 30.0%
!! TTCTAAAGTAGGATGGATAA+AGG - Chr4:81823386-81823405 None:intergenic 30.0%
!!! AAGATTTTAACTACTGAGGT+AGG + Chr4:81822438-81822457 MsG0480023176.01.T01:intron 30.0%
!!! AAGTTTTTTTGTCTTCCTCT+TGG + Chr4:81823543-81823562 MsG0480023176.01.T01:intron 30.0%
!!! CGTTAAGATTTTAACTACTG+AGG + Chr4:81822434-81822453 MsG0480023176.01.T01:intron 30.0%
!!! TACGTTTGTTGTGTGATTTT+TGG + Chr4:81821557-81821576 MsG0480023176.01.T01:intron 30.0%
AAAACGCATGAGCAGATAAT+GGG - Chr4:81822618-81822637 None:intergenic 35.0%
AACATTGAGTCATTAGCTGT+TGG + Chr4:81821337-81821356 MsG0480023176.01.T01:CDS 35.0%
AAGAAACAGAATGAATGAGC+TGG - Chr4:81824732-81824751 None:intergenic 35.0%
AAGAAGGTCAGATACTAGAT+TGG - Chr4:81824147-81824166 None:intergenic 35.0%
AAGGGAAAAGTCACAATCAA+TGG - Chr4:81826103-81826122 None:intergenic 35.0%
ACAATTAGCTGAATACCAAG+AGG - Chr4:81823561-81823580 None:intergenic 35.0%
ACAGCTATTAATGCTCTTGT+TGG + Chr4:81823059-81823078 MsG0480023176.01.T01:CDS 35.0%
AGAAATAGCTAGAACTGGAA+AGG + Chr4:81822823-81822842 MsG0480023176.01.T01:CDS 35.0%
AGGCACAAAAATGAACATAC+GGG + Chr4:81825834-81825853 MsG0480023176.01.T01:intron 35.0%
AGTCATTCTGTGTATGTTAC+AGG + Chr4:81822739-81822758 MsG0480023176.01.T01:intron 35.0%
ATCAATTCACGTTCTACTTG+AGG - Chr4:81821609-81821628 None:intergenic 35.0%
ATCAGTACCAGAAACAACAA+TGG - Chr4:81821389-81821408 None:intergenic 35.0%
ATGAGAAGTTCAACCAGAAT+GGG - Chr4:81824757-81824776 None:intergenic 35.0%
ATTAGCAGTTAGTACGTGTT+AGG + Chr4:81826737-81826756 MsG0480023176.01.T01:CDS 35.0%
CAATCGAATTGAGTGACATT+CGG + Chr4:81822270-81822289 MsG0480023176.01.T01:intron 35.0%
CACAATCAATGGAGATTACA+AGG - Chr4:81826092-81826111 None:intergenic 35.0%
CCTCATAATTAATCTTGCTC+AGG + Chr4:81826368-81826387 MsG0480023176.01.T01:intron 35.0%
CCTGAGCAAGATTAATTATG+AGG - Chr4:81826371-81826390 None:intergenic 35.0%
CGTGTTGAACATTTCTTATC+TGG + Chr4:81824622-81824641 MsG0480023176.01.T01:intron 35.0%
GAAATGTTTGCTTGTGTGAA+GGG + Chr4:81824176-81824195 MsG0480023176.01.T01:intron 35.0%
GAATACACAGATTAAGTGGT+TGG + Chr4:81821748-81821767 MsG0480023176.01.T01:intron 35.0%
GCAGCAATTGAATAAGTTAG+TGG + Chr4:81825669-81825688 MsG0480023176.01.T01:CDS 35.0%
GCATTAAGAAGGGAAAAGAT+GGG + Chr4:81822978-81822997 MsG0480023176.01.T01:CDS 35.0%
GCCTCAAAGAAAAACAATTG+AGG - Chr4:81823711-81823730 None:intergenic 35.0%
GCTATGAAATCTGGTACTAA+AGG - Chr4:81823825-81823844 None:intergenic 35.0%
GGAATGATTAACAGAATAGC+TGG + Chr4:81821292-81821311 MsG0480023176.01.T01:CDS 35.0%
GTTACCATCATCAAAGTTCT+GGG + Chr4:81822198-81822217 MsG0480023176.01.T01:intron 35.0%
TACAATCACGTGGTAATTTC+AGG + Chr4:81822714-81822733 MsG0480023176.01.T01:intron 35.0%
TATGAGAAGTTCAACCAGAA+TGG - Chr4:81824758-81824777 None:intergenic 35.0%
TATGCTCCTGTAAGAATACA+AGG - Chr4:81824665-81824684 None:intergenic 35.0%
TATTTCCAGAGTTTAGCTGT+AGG + Chr4:81825571-81825590 MsG0480023176.01.T01:intron 35.0%
TCCCAATGTAATATAAGGAC+GGG - Chr4:81822557-81822576 None:intergenic 35.0%
TGAAATGTTTGCTTGTGTGA+AGG + Chr4:81824175-81824194 MsG0480023176.01.T01:intron 35.0%
TGCATTAAGAAGGGAAAAGA+TGG + Chr4:81822977-81822996 MsG0480023176.01.T01:CDS 35.0%
TGTGTATGTTACAGGTTACT+GGG + Chr4:81822747-81822766 MsG0480023176.01.T01:intron 35.0%
TGTTACCATCATCAAAGTTC+TGG + Chr4:81822197-81822216 MsG0480023176.01.T01:intron 35.0%
TTGACTGTAAAACTGTCTGA+AGG - Chr4:81824221-81824240 None:intergenic 35.0%
TTGGGAATACACAGATTAAG+TGG + Chr4:81821744-81821763 MsG0480023176.01.T01:intron 35.0%
! AAAATGGGGATGATGATGTT+TGG - Chr4:81822682-81822701 None:intergenic 35.0%
! AACTCTGAGAATAGTTCACA+AGG - Chr4:81824502-81824521 None:intergenic 35.0%
! AATACTTGCTTTGAACGAGA+AGG - Chr4:81821153-81821172 None:intergenic 35.0%
! AATTTGGTGATACAATCACG+TGG + Chr4:81822704-81822723 MsG0480023176.01.T01:intron 35.0%
! AGTAGTTAGTCATCGTGTTT+TGG + Chr4:81821862-81821881 MsG0480023176.01.T01:intron 35.0%
! ATCATCCCCATTTTGCAATT+TGG + Chr4:81822688-81822707 MsG0480023176.01.T01:intron 35.0%
! CAAGAGATTTTATAGCTGCT+TGG - Chr4:81826403-81826422 None:intergenic 35.0%
! GGTTCAAGTGTAGTCAATTT+TGG + Chr4:81824874-81824893 MsG0480023176.01.T01:intron 35.0%
! GTAACAATGTTTAGAACTCC+AGG - Chr4:81825405-81825424 None:intergenic 35.0%
! TAAAGCTCATAGAAGGGTAT+TGG - Chr4:81824703-81824722 None:intergenic 35.0%
! TATACTTCTGATGCTTTTCC+AGG + Chr4:81826530-81826549 MsG0480023176.01.T01:intron 35.0%
! TATTGACTGTAGATTGTGTG+TGG + Chr4:81823745-81823764 MsG0480023176.01.T01:intron 35.0%
! TCTCCTTGAAAAAGCATAGT+TGG - Chr4:81825909-81825928 None:intergenic 35.0%
! TGATATTGCCAGCATTTTCA+GGG + Chr4:81826641-81826660 MsG0480023176.01.T01:CDS 35.0%
! TTCTCAAATCGATTCACTTG+TGG - Chr4:81825871-81825890 None:intergenic 35.0%
! TTGATATTGCCAGCATTTTC+AGG + Chr4:81826640-81826659 MsG0480023176.01.T01:CDS 35.0%
! TTTAGGATTTGAGTGTGGAA+TGG + Chr4:81826061-81826080 MsG0480023176.01.T01:intron 35.0%
! TTTGATTCTTGCCACTTGTA+AGG + Chr4:81823850-81823869 MsG0480023176.01.T01:intron 35.0%
!! AACACGATTCTAAAGTAGGA+TGG - Chr4:81823393-81823412 None:intergenic 35.0%
!! ATTGATAATGCTGCAGAGTT+CGG + Chr4:81821233-81821252 MsG0480023176.01.T01:intron 35.0%
!! CACGCTTTATTTATAGCATG+TGG - Chr4:81824974-81824993 None:intergenic 35.0%
!! CCCTCAATTGTTTTTCTTTG+AGG + Chr4:81823707-81823726 MsG0480023176.01.T01:intron 35.0%
!! GAAGCTTGTCAATGTTTTGA+AGG + Chr4:81821441-81821460 MsG0480023176.01.T01:CDS 35.0%
!! GGAGTTCTAAACATTGTTAC+AGG + Chr4:81825405-81825424 MsG0480023176.01.T01:CDS 35.0%
!! TGTTGGTTTGAATCAAGACA+GGG + Chr4:81821354-81821373 MsG0480023176.01.T01:CDS 35.0%
!! TGTTGTGTGATTTTTGGACT+AGG + Chr4:81821563-81821582 MsG0480023176.01.T01:intron 35.0%
!! TGTTGTTTCTGGTACTGATA+GGG + Chr4:81821390-81821409 MsG0480023176.01.T01:CDS 35.0%
!! TTCTGTTTCTTTTCCCATTC+TGG + Chr4:81824741-81824760 MsG0480023176.01.T01:intron 35.0%
!! TTGTTGTTTCTGGTACTGAT+AGG + Chr4:81821389-81821408 MsG0480023176.01.T01:CDS 35.0%
!!! ACTAGGTGTGTTTTGAAGAA+TGG + Chr4:81823294-81823313 MsG0480023176.01.T01:intron 35.0%
!!! CTGTTGGGTCTTTATTTTTG+TGG + Chr4:81822227-81822246 MsG0480023176.01.T01:intron 35.0%
!!! CTTTTCACCATTGTTGTTTC+TGG + Chr4:81821379-81821398 MsG0480023176.01.T01:CDS 35.0%
AAAATGTAGAAAGGCTGCAC+CGG - Chr4:81823625-81823644 None:intergenic 40.0%
AAACTGTCTGAAGGCTCTAT+AGG - Chr4:81824212-81824231 None:intergenic 40.0%
AAGGAGAGTTGAGTGAAAAC+AGG + Chr4:81825922-81825941 MsG0480023176.01.T01:intron 40.0%
AATGTCCTACAGCTAAACTC+TGG - Chr4:81825579-81825598 None:intergenic 40.0%
AGAAATGTTCAACACGTCGT+CGG - Chr4:81824618-81824637 None:intergenic 40.0%
AGAGTTGAGTGAAAACAGGA+GGG + Chr4:81825926-81825945 MsG0480023176.01.T01:intron 40.0%
AGATCCCAGAACTTTGATGA+TGG - Chr4:81822205-81822224 None:intergenic 40.0%
AGATGAGTCAATCAGCAAGT+TGG + Chr4:81825645-81825664 MsG0480023176.01.T01:CDS 40.0%
AGCAATGACCTCAATCGTAA+CGG - Chr4:81821816-81821835 None:intergenic 40.0%
AGGTTACGGTATACATGCAA+AGG + Chr4:81823429-81823448 MsG0480023176.01.T01:intron 40.0%
ATATAATAGGATCATGCCCC+TGG - Chr4:81825983-81826002 None:intergenic 40.0%
ATCAAGTACTTGATGCTCAG+TGG + Chr4:81824240-81824259 MsG0480023176.01.T01:CDS 40.0%
ATCAATTCTCGCTCAGCAAA+TGG - Chr4:81826576-81826595 None:intergenic 40.0%
ATGAGGAAATGGAGAAGAAG+CGG - Chr4:81820928-81820947 None:intergenic 40.0%
ATTGAGTGACATTCGGAGAA+AGG + Chr4:81822277-81822296 MsG0480023176.01.T01:intron 40.0%
CAAAACGCATGAGCAGATAA+TGG - Chr4:81822619-81822638 None:intergenic 40.0%
CAAACTTGCCGAAATTTCTC+TGG - Chr4:81822796-81822815 None:intergenic 40.0%
CACAGATGTCTGGCAAAATT+TGG - Chr4:81825206-81825225 None:intergenic 40.0%
CACTGTGATGAATGAGAAAG+TGG - Chr4:81822901-81822920 None:intergenic 40.0%
CAGAAGTTGAAGGAATCTCT+CGG + Chr4:81825599-81825618 MsG0480023176.01.T01:CDS 40.0%
CAGAGAAATTTCGGCAAGTT+TGG + Chr4:81822794-81822813 MsG0480023176.01.T01:CDS 40.0%
CATTTCTTATCTGGGCATCA+AGG + Chr4:81824631-81824650 MsG0480023176.01.T01:intron 40.0%
CCATGTCCTTGTATTCTTAC+AGG + Chr4:81824656-81824675 MsG0480023176.01.T01:intron 40.0%
CCTGTAAGAATACAAGGACA+TGG - Chr4:81824659-81824678 None:intergenic 40.0%
CCTTGTGAATGACTCATCTT+GGG + Chr4:81822355-81822374 MsG0480023176.01.T01:intron 40.0%
CTGTGTATGTTACAGGTTAC+TGG + Chr4:81822746-81822765 MsG0480023176.01.T01:intron 40.0%
GAACTTCTCATAGCTTAGGA+GGG + Chr4:81824766-81824785 MsG0480023176.01.T01:intron 40.0%
GATTTCTAACACACCTTTGC+TGG + Chr4:81823599-81823618 MsG0480023176.01.T01:intron 40.0%
GCCCGTCCTTATATTACATT+GGG + Chr4:81822553-81822572 MsG0480023176.01.T01:intron 40.0%
GGCACAAAAATGAACATACG+GGG + Chr4:81825835-81825854 MsG0480023176.01.T01:intron 40.0%
GGCACACTCAAAAACTAGTT+AGG - Chr4:81826346-81826365 None:intergenic 40.0%
GGTTGAACTTCTCATAGCTT+AGG + Chr4:81824762-81824781 MsG0480023176.01.T01:intron 40.0%
GGTTGAGATGGAAATGAAGA+TGG - Chr4:81821009-81821028 None:intergenic 40.0%
GGTTTGAATTGGAGTTTGTG+TGG - Chr4:81820962-81820981 None:intergenic 40.0%
GTAGGACATTCAGAAGTTGA+AGG + Chr4:81825589-81825608 MsG0480023176.01.T01:CDS 40.0%
GTGTATGTTACAGGTTACTG+GGG + Chr4:81822748-81822767 MsG0480023176.01.T01:intron 40.0%
GTTGCAGTCCAGAGAAATTT+CGG + Chr4:81822785-81822804 MsG0480023176.01.T01:CDS 40.0%
TAACTACTGAGGTAGGAGTA+TGG + Chr4:81822445-81822464 MsG0480023176.01.T01:intron 40.0%
TACACAGATTAAGTGGTTGG+TGG + Chr4:81821751-81821770 MsG0480023176.01.T01:intron 40.0%
TACAGGAGTCTTTGCTAGAA+GGG + Chr4:81825422-81825441 MsG0480023176.01.T01:CDS 40.0%
TAGAAGGGGCTATAACATTC+AGG + Chr4:81825437-81825456 MsG0480023176.01.T01:CDS 40.0%
TCAAGTACTTGATGCTCAGT+GGG + Chr4:81824241-81824260 MsG0480023176.01.T01:CDS 40.0%
TCTCCATTTCCTCATAACCA+TGG + Chr4:81820933-81820952 MsG0480023176.01.T01:exon 40.0%
TGAAATGTCAACAGTGCTTG+AGG - Chr4:81823338-81823357 None:intergenic 40.0%
TGAACTTCTCATAGCTTAGG+AGG + Chr4:81824765-81824784 MsG0480023176.01.T01:intron 40.0%
TGCCCGTCCTTATATTACAT+TGG + Chr4:81822552-81822571 MsG0480023176.01.T01:intron 40.0%
TGGAAACCTGTCTTAGGATT+TGG + Chr4:81826215-81826234 MsG0480023176.01.T01:intron 40.0%
TGGAGATTGGCAAATGCTAT+GGG - Chr4:81825801-81825820 None:intergenic 40.0%
TGTAAGTACATACCTCAGCA+CGG - Chr4:81821662-81821681 None:intergenic 40.0%
TGTGGCAGTAAGTTATGTGT+GGG + Chr4:81822075-81822094 MsG0480023176.01.T01:intron 40.0%
TTACAGGAGTCTTTGCTAGA+AGG + Chr4:81825421-81825440 MsG0480023176.01.T01:CDS 40.0%
TTCTACCACAACCTTACAAG+TGG - Chr4:81823864-81823883 None:intergenic 40.0%
TTGAGTGACATTCGGAGAAA+GGG + Chr4:81822278-81822297 MsG0480023176.01.T01:intron 40.0%
TTGTGGCAGTAAGTTATGTG+TGG + Chr4:81822074-81822093 MsG0480023176.01.T01:intron 40.0%
TTGTGTTGGAAACCTGTCTT+AGG + Chr4:81826209-81826228 MsG0480023176.01.T01:intron 40.0%
! AAATCGATTCACTTGTGGTC+GGG - Chr4:81825866-81825885 None:intergenic 40.0%
! AAGAAGAGTGTGGTTGAGTT+AGG - Chr4:81821030-81821049 None:intergenic 40.0%
! CAAATCGATTCACTTGTGGT+CGG - Chr4:81825867-81825886 None:intergenic 40.0%
! CAAATGTGCTGATATGAGTC+GGG + Chr4:81822581-81822600 MsG0480023176.01.T01:intron 40.0%
! GCAAATGTGCTGATATGAGT+CGG + Chr4:81822580-81822599 MsG0480023176.01.T01:intron 40.0%
! TTTTGTGCCTACTATGACAG+TGG - Chr4:81825824-81825843 None:intergenic 40.0%
!! CTGTTGGTTTGAATCAAGAC+AGG + Chr4:81821353-81821372 MsG0480023176.01.T01:CDS 40.0%
!!! GAGCCAACTATGCTTTTTCA+AGG + Chr4:81825903-81825922 MsG0480023176.01.T01:intron 40.0%
AATCTCTCGGCTTACAACTG+TGG + Chr4:81825612-81825631 MsG0480023176.01.T01:CDS 45.0%
ACAAAACTGATACGCCTGTG+GGG + Chr4:81823105-81823124 MsG0480023176.01.T01:CDS 45.0%
ACAGGAGTCTTTGCTAGAAG+GGG + Chr4:81825423-81825442 MsG0480023176.01.T01:CDS 45.0%
AGCGTGTTCAACACAGTTCT+AGG + Chr4:81824988-81825007 MsG0480023176.01.T01:intron 45.0%
AGCTAAGATCGTGGACATCT+CGG + Chr4:81821784-81821803 MsG0480023176.01.T01:CDS 45.0%
AGTTCGGAGACACACGATTT+CGG + Chr4:81821249-81821268 MsG0480023176.01.T01:CDS 45.0%
ATCTCCACCACTGTCATAGT+AGG + Chr4:81825814-81825833 MsG0480023176.01.T01:intron 45.0%
ATGACCAAGACTGTGTCCAT+CGG - Chr4:81826134-81826153 None:intergenic 45.0%
ATGCTTGTGAATGATGCTCC+TGG + Chr4:81825384-81825403 MsG0480023176.01.T01:CDS 45.0%
ATGTAAGATCATACCCCCAC+AGG - Chr4:81823122-81823141 None:intergenic 45.0%
CAAGTACTTGATGCTCAGTG+GGG + Chr4:81824242-81824261 MsG0480023176.01.T01:CDS 45.0%
CCAACACAAATCTCCTGTTG+TGG - Chr4:81826198-81826217 None:intergenic 45.0%
CCACAACAGGAGATTTGTGT+TGG + Chr4:81826195-81826214 MsG0480023176.01.T01:intron 45.0%
CCCAAGATGAGTCATTCACA+AGG - Chr4:81822358-81822377 None:intergenic 45.0%
CTCGAGGGTTATTGTGTGAT+CGG - Chr4:81826685-81826704 None:intergenic 45.0%
CTTTGAACGAGAAGGTGAAG+GGG - Chr4:81821145-81821164 None:intergenic 45.0%
GACAAAACTGATACGCCTGT+GGG + Chr4:81823104-81823123 MsG0480023176.01.T01:CDS 45.0%
GAGAGTTGAGTGAAAACAGG+AGG + Chr4:81825925-81825944 MsG0480023176.01.T01:intron 45.0%
GCCTTGTGAATGACTCATCT+TGG + Chr4:81822354-81822373 MsG0480023176.01.T01:intron 45.0%
GCTTCGTATCCAGATCTTGA+GGG + Chr4:81823032-81823051 MsG0480023176.01.T01:CDS 45.0%
GGAAGATTCCGTTACGATTG+AGG + Chr4:81821805-81821824 MsG0480023176.01.T01:CDS 45.0%
GGATAATGCCTTCAGACTAG+CGG + Chr4:81825339-81825358 MsG0480023176.01.T01:intron 45.0%
GTGGAGATTGGCAAATGCTA+TGG - Chr4:81825802-81825821 None:intergenic 45.0%
GTTAACTCTCAGTTGCAGTG+AGG + Chr4:81826016-81826035 MsG0480023176.01.T01:intron 45.0%
TAAGTTAGTGGAGCTGCATG+AGG + Chr4:81825681-81825700 MsG0480023176.01.T01:CDS 45.0%
TCGCCATGGTTATGAGGAAA+TGG - Chr4:81820939-81820958 None:intergenic 45.0%
TGACAAAACTGATACGCCTG+TGG + Chr4:81823103-81823122 MsG0480023176.01.T01:CDS 45.0%
TGCTTCGTATCCAGATCTTG+AGG + Chr4:81823031-81823050 MsG0480023176.01.T01:CDS 45.0%
TGGCTGTATTGTTGCTAGAC+TGG + Chr4:81822465-81822484 MsG0480023176.01.T01:intron 45.0%
TGTCCATCGGCATCATCAAA+GGG - Chr4:81826121-81826140 None:intergenic 45.0%
TTTGAACGAGAAGGTGAAGG+GGG - Chr4:81821144-81821163 None:intergenic 45.0%
! AATCGATTCACTTGTGGTCG+GGG - Chr4:81825865-81825884 None:intergenic 45.0%
! ACATACCTCAGCACGGTTTT+GGG - Chr4:81821655-81821674 None:intergenic 45.0%
! ACGAGCATCAGCTGGATTTT+TGG - Chr4:81825271-81825290 None:intergenic 45.0%
! ACTATGACAGTGGTGGAGAT+TGG - Chr4:81825814-81825833 None:intergenic 45.0%
! AGCTTTAGCCCTGAAAATGC+TGG - Chr4:81826652-81826671 None:intergenic 45.0%
! ATCGAATTCCGCTAGTCTGA+AGG - Chr4:81825350-81825369 None:intergenic 45.0%
! CTGATTGACTCATCTGTACC+CGG - Chr4:81825640-81825659 None:intergenic 45.0%
! CTGGGTTTAGGATTTGAGTG+TGG + Chr4:81826056-81826075 MsG0480023176.01.T01:intron 45.0%
! GCTTTGAACGAGAAGGTGAA+GGG - Chr4:81821146-81821165 None:intergenic 45.0%
! GGATGAGGTTGTTGTTGTTG+CGG - Chr4:81821071-81821090 None:intergenic 45.0%
! GGGGCTATAACATTCAGGTT+TGG + Chr4:81825442-81825461 MsG0480023176.01.T01:intron 45.0%
! TACATACCTCAGCACGGTTT+TGG - Chr4:81821656-81821675 None:intergenic 45.0%
! TCAGTTTTTACCCAGGTGGA+GGG + Chr4:81824853-81824872 MsG0480023176.01.T01:intron 45.0%
! TCTTGCCACTTGTAAGGTTG+TGG + Chr4:81823856-81823875 MsG0480023176.01.T01:intron 45.0%
! TGCTTTGAACGAGAAGGTGA+AGG - Chr4:81821147-81821166 None:intergenic 45.0%
! TTCTGATGCTTTTCCAGGTC+CGG + Chr4:81826535-81826554 MsG0480023176.01.T01:intron 45.0%
!! AAGTTCTGGGATCTAGCTGT+TGG + Chr4:81822211-81822230 MsG0480023176.01.T01:intron 45.0%
!! AGTTCTGGGATCTAGCTGTT+GGG + Chr4:81822212-81822231 MsG0480023176.01.T01:intron 45.0%
!! ATGGCAAGTGGGTTATATCC+CGG - Chr4:81826557-81826576 None:intergenic 45.0%
!! GGCGTATCAGTTTTGTCAAC+AGG - Chr4:81823101-81823120 None:intergenic 45.0%
!! GTGGTTGAGTTAGGTTGAGA+TGG - Chr4:81821021-81821040 None:intergenic 45.0%
!! TTTCCCTTTGATGATGCCGA+TGG + Chr4:81826115-81826134 MsG0480023176.01.T01:intron 45.0%
!!! GCTGTTTTTCCCTCAAGATC+TGG - Chr4:81823044-81823063 None:intergenic 45.0%
!! ATTTAATTGAAATAAATAAT+TGG + Chr4:81823206-81823225 MsG0480023176.01.T01:intron 5.0%
!!! AAAAAAATTCAAATAATTTT+AGG + Chr4:81821531-81821550 MsG0480023176.01.T01:intron 5.0%
!!! AAAAAATTCAAATAATTTTA+GGG + Chr4:81821532-81821551 MsG0480023176.01.T01:intron 5.0%
!!! AGTTTTATTAATATTAAAAA+TGG - Chr4:81826502-81826521 None:intergenic 5.0%
!!! ATTTTTAATATTAATAAAAC+TGG + Chr4:81826501-81826520 MsG0480023176.01.T01:intron 5.0%
!!! TAATATTTTTTTTTTTTTGT+AGG + Chr4:81821484-81821503 MsG0480023176.01.T01:intron 5.0%
ACAAATCTCCTGTTGTGGCC+AGG - Chr4:81826193-81826212 None:intergenic 50.0%
ACAGTACAGTTGTGCTGTGG+CGG - Chr4:81820891-81820910 None:intergenic 50.0%
ACGTCGTGCAGCAGCATTTA+CGG - Chr4:81826613-81826632 None:intergenic 50.0%
ACTGATACTGTCTTCGCCAG+GGG + Chr4:81825964-81825983 MsG0480023176.01.T01:intron 50.0%
AGTTCACAAGGCTCCTGTTG+TGG - Chr4:81824490-81824509 None:intergenic 50.0%
CAAAACTGATACGCCTGTGG+GGG + Chr4:81823106-81823125 MsG0480023176.01.T01:CDS 50.0%
CACCTTCAGAGCTAAGATCG+TGG + Chr4:81821775-81821794 MsG0480023176.01.T01:CDS 50.0%
CACTGATACTGTCTTCGCCA+GGG + Chr4:81825963-81825982 MsG0480023176.01.T01:intron 50.0%
CGATCACACAATAACCCTCG+AGG + Chr4:81826683-81826702 MsG0480023176.01.T01:CDS 50.0%
CTAGCAAGAACCTGCATACG+AGG - Chr4:81824338-81824357 None:intergenic 50.0%
GACTGAGGATCAGGTGTACT+GGG + Chr4:81826038-81826057 MsG0480023176.01.T01:intron 50.0%
GAGACAGTACAGTTGTGCTG+TGG - Chr4:81820894-81820913 None:intergenic 50.0%
GCAGCTGAATACCGCCAAAA+TGG - Chr4:81823014-81823033 None:intergenic 50.0%
GCATTGTAGTCCTCGTATGC+AGG + Chr4:81824325-81824344 MsG0480023176.01.T01:intron 50.0%
GGATCAGGTGTACTGGGTTT+AGG + Chr4:81826044-81826063 MsG0480023176.01.T01:intron 50.0%
GGGTCACCAAATCCTAAGAC+AGG - Chr4:81826224-81826243 None:intergenic 50.0%
GTGTCCATCGGCATCATCAA+AGG - Chr4:81826122-81826141 None:intergenic 50.0%
TACACTTGAACCCTCCACCT+GGG - Chr4:81824866-81824885 None:intergenic 50.0%
TATATGCACCTGGCCACAAC+AGG + Chr4:81826182-81826201 MsG0480023176.01.T01:intron 50.0%
TCACTGATACTGTCTTCGCC+AGG + Chr4:81825962-81825981 MsG0480023176.01.T01:intron 50.0%
TCGCTCAGCAAATGGCAAGT+GGG - Chr4:81826568-81826587 None:intergenic 50.0%
TCGGCTTACAACTGTGGTTC+CGG + Chr4:81825618-81825637 MsG0480023176.01.T01:CDS 50.0%
TCTAACACACCTTTGCTGGC+CGG + Chr4:81823603-81823622 MsG0480023176.01.T01:intron 50.0%
TGAAAACAGGAGGGCGAACT+GGG + Chr4:81825935-81825954 MsG0480023176.01.T01:intron 50.0%
TGGTGTGAAATCGCGTCATG+TGG + Chr4:81824922-81824941 MsG0480023176.01.T01:intron 50.0%
TGTGCCTACTATGACAGTGG+TGG - Chr4:81825821-81825840 None:intergenic 50.0%
! CATACCTCAGCACGGTTTTG+GGG - Chr4:81821654-81821673 None:intergenic 50.0%
! GTCAGTTTTTACCCAGGTGG+AGG + Chr4:81824852-81824871 MsG0480023176.01.T01:intron 50.0%
! GTGCATCTGCTCCATTTTGG+CGG + Chr4:81823000-81823019 MsG0480023176.01.T01:CDS 50.0%
! TCTGATGCTTTTCCAGGTCC+GGG + Chr4:81826536-81826555 MsG0480023176.01.T01:intron 50.0%
! TGAGGTTGTTGTTGTTGCGG+CGG - Chr4:81821068-81821087 None:intergenic 50.0%
! TGGGTGCATCTGCTCCATTT+TGG + Chr4:81822997-81823016 MsG0480023176.01.T01:CDS 50.0%
!! CACACGATTTCGGTGTTCGT+TGG + Chr4:81821259-81821278 MsG0480023176.01.T01:CDS 50.0%
!! GTCCACGATCTTAGCTCTGA+AGG - Chr4:81821780-81821799 None:intergenic 50.0%
AACGAGAAGGTGAAGGGGGA+GGG - Chr4:81821140-81821159 None:intergenic 55.0%
AGATCCCCAAAACCGTGCTG+AGG + Chr4:81821647-81821666 MsG0480023176.01.T01:CDS 55.0%
CGGCTTACAACTGTGGTTCC+GGG + Chr4:81825619-81825638 MsG0480023176.01.T01:CDS 55.0%
CTACACTTGAACCCTCCACC+TGG - Chr4:81824867-81824886 None:intergenic 55.0%
CTCAGTTGCAGTGAGGACTG+AGG + Chr4:81826023-81826042 MsG0480023176.01.T01:intron 55.0%
CTCGCTCAGCAAATGGCAAG+TGG - Chr4:81826569-81826588 None:intergenic 55.0%
GACACCACAGTCTCCTCCAA+TGG + Chr4:81821114-81821133 MsG0480023176.01.T01:CDS 55.0%
GATGCCGATGGACACAGTCT+TGG + Chr4:81826127-81826146 MsG0480023176.01.T01:intron 55.0%
GCTGATGTACGAGCATCAGC+TGG - Chr4:81825279-81825298 None:intergenic 55.0%
GGACTGAGGATCAGGTGTAC+TGG + Chr4:81826037-81826056 MsG0480023176.01.T01:intron 55.0%
GGACTGCAACCATCTTCCCT+GGG - Chr4:81822775-81822794 None:intergenic 55.0%
GGTAGGTGGGAAGAAGAGTG+TGG - Chr4:81821040-81821059 None:intergenic 55.0%
GTGAAAACAGGAGGGCGAAC+TGG + Chr4:81825934-81825953 MsG0480023176.01.T01:intron 55.0%
GTGTGGTCGCCATGGTTATG+AGG - Chr4:81820945-81820964 None:intergenic 55.0%
GTGTTCGTTGGCGATGAGAG+TGG + Chr4:81821271-81821290 MsG0480023176.01.T01:CDS 55.0%
TACAGGTTACTGGGGACCCA+GGG + Chr4:81822756-81822775 MsG0480023176.01.T01:intron 55.0%
TGCAGTGAGGACTGAGGATC+AGG + Chr4:81826029-81826048 MsG0480023176.01.T01:intron 55.0%
TGGACTGCAACCATCTTCCC+TGG - Chr4:81822776-81822795 None:intergenic 55.0%
TGGAGTTTGTGTGGTCGCCA+TGG - Chr4:81820953-81820972 None:intergenic 55.0%
TTACAGGTTACTGGGGACCC+AGG + Chr4:81822755-81822774 MsG0480023176.01.T01:intron 55.0%
! GAGGTTGTTGTTGTTGCGGC+GGG - Chr4:81821067-81821086 None:intergenic 55.0%
! GCTGGAGTGTTTGCGAGAAG+AGG + Chr4:81821310-81821329 MsG0480023176.01.T01:CDS 55.0%
!! AGTGGGTTATATCCCGGACC+TGG - Chr4:81826551-81826570 None:intergenic 55.0%
AGGGCCATTGGAGGAGACTG+TGG - Chr4:81821121-81821140 None:intergenic 60.0%
GAACGAGAAGGTGAAGGGGG+AGG - Chr4:81821141-81821160 None:intergenic 60.0%
TACTGGGGACCCAGGGAAGA+TGG + Chr4:81822763-81822782 MsG0480023176.01.T01:CDS 60.0%
TAGCAGCGGCGGATAGGATG+AGG - Chr4:81821086-81821105 None:intergenic 60.0%
TTGTTGCGGCGGGAAGTGGT+AGG - Chr4:81821057-81821076 None:intergenic 60.0%
! CTATCCGCCGCTGCTACTTC+CGG + Chr4:81821090-81821109 MsG0480023176.01.T01:CDS 60.0%
! GGTGTCACCGGAAGTAGCAG+CGG - Chr4:81821100-81821119 None:intergenic 60.0%
! GTTGTTGTTGCGGCGGGAAG+TGG - Chr4:81821061-81821080 None:intergenic 60.0%
!! GGAGGAGACTGTGGTGTCAC+CGG - Chr4:81821112-81821131 None:intergenic 60.0%
AGGTGAAGGGGGAGGGCCAT+TGG - Chr4:81821133-81821152 None:intergenic 65.0%
CGGAAGTAGCAGCGGCGGAT+AGG - Chr4:81821092-81821111 None:intergenic 65.0%
GTCACCGGAAGTAGCAGCGG+CGG - Chr4:81821097-81821116 None:intergenic 65.0%
TGAAGGGGGAGGGCCATTGG+AGG - Chr4:81821130-81821149 None:intergenic 65.0%
TGCGGCGGGAAGTGGTAGGT+GGG - Chr4:81821053-81821072 None:intergenic 65.0%
TTGCGGCGGGAAGTGGTAGG+TGG - Chr4:81821054-81821073 None:intergenic 65.0%
! AAGGCTGCACCGGCCAGCAA+AGG - Chr4:81823615-81823634 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 81820852 81826758 81820852 ID=MsG0480023176.01;Name=MsG0480023176.01
Chr4 mRNA 81820852 81826758 81820852 ID=MsG0480023176.01.T01;Parent=MsG0480023176.01;Name=MsG0480023176.01.T01;_AED=0.46;_eAED=0.46;_QI=100|1|0.9|1|0.88|0.8|10|0|445
Chr4 exon 81820852 81821163 81820852 ID=MsG0480023176.01.T01:exon:737;Parent=MsG0480023176.01.T01
Chr4 exon 81821249 81821462 81821249 ID=MsG0480023176.01.T01:exon:738;Parent=MsG0480023176.01.T01
Chr4 exon 81821585 81821668 81821585 ID=MsG0480023176.01.T01:exon:739;Parent=MsG0480023176.01.T01
Chr4 exon 81821758 81821826 81821758 ID=MsG0480023176.01.T01:exon:740;Parent=MsG0480023176.01.T01
Chr4 exon 81822761 81822844 81822761 ID=MsG0480023176.01.T01:exon:741;Parent=MsG0480023176.01.T01
Chr4 exon 81822975 81823127 81822975 ID=MsG0480023176.01.T01:exon:742;Parent=MsG0480023176.01.T01
Chr4 exon 81824197 81824283 81824197 ID=MsG0480023176.01.T01:exon:743;Parent=MsG0480023176.01.T01
Chr4 exon 81825354 81825458 81825354 ID=MsG0480023176.01.T01:exon:744;Parent=MsG0480023176.01.T01
Chr4 exon 81825580 81825702 81825580 ID=MsG0480023176.01.T01:exon:745;Parent=MsG0480023176.01.T01
Chr4 exon 81826552 81826758 81826552 ID=MsG0480023176.01.T01:exon:746;Parent=MsG0480023176.01.T01
Chr4 five_prime_UTR 81820852 81820951 81820852 ID=MsG0480023176.01.T01:five_prime_utr;Parent=MsG0480023176.01.T01
Chr4 CDS 81820952 81821163 81820952 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81821249 81821462 81821249 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81821585 81821668 81821585 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81821758 81821826 81821758 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81822761 81822844 81822761 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81822975 81823127 81822975 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81824197 81824283 81824197 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81825354 81825458 81825354 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81825580 81825702 81825580 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Chr4 CDS 81826552 81826758 81826552 ID=MsG0480023176.01.T01:cds;Parent=MsG0480023176.01.T01
Gene Sequence

>MsG0480023176.01.T01

ATGGCGACCACACAAACTCCAATTCAAACCTTCAAATTCACTCATTCTGATTCTCCATCTTCATTTCCATCTCAACCTAACTCAACCACACTCTTCTTCCCACCTACCACTTCCCGCCGCAACAACAACAACCTCATCCTATCCGCCGCTGCTACTTCCGGTGACACCACAGTCTCCTCCAATGGCCCTCCCCCTTCACCTTCTCGTTCAAAAGTTCGGAGACACACGATTTCGGTGTTCGTTGGCGATGAGAGTGGAATGATTAACAGAATAGCTGGAGTGTTTGCGAGAAGAGGCTACAACATTGAGTCATTAGCTGTTGGTTTGAATCAAGACAGGGCTCTTTTCACCATTGTTGTTTCTGGTACTGATAGGGTTTTACGTCAAGTTGTTGAACAGCTTCAGAAGCTTGTCAATGTTTTGAAGGTAGAAGATCTTTCACGTGAACCTCAAGTAGAACGTGAATTGATGCTCGTGAAAGTTCATGCAGATCCCCAAAACCGTGCTGAGATTAAGTGGTTGGTGGACACCTTCAGAGCTAAGATCGTGGACATCTCGGAAGATTCCGTTACGATTGAGGTTACTGGGGACCCAGGGAAGATGGTTGCAGTCCAGAGAAATTTCGGCAAGTTTGGAATTAAAGAAATAGCTAGAACTGGAAAGATTGCATTAAGAAGGGAAAAGATGGGTGCATCTGCTCCATTTTGGCGGTATTCAGCTGCTTCGTATCCAGATCTTGAGGGAAAAACAGCTATTAATGCTCTTGTTGGAGCGAAAAGTGTGAATCCTGTTGACAAAACTGATACGCCTGTGGGGGGAGATGTTTATCCTATAGAGCCTTCAGACAGTTTTACAGTCAATCAAGTACTTGATGCTCAGTGGGGTTTTCTCAATGATGAAGATACTAGCGGAATTCGATCACACACTTTGTCTATGCTTGTGAATGATGCTCCTGGAGTTCTAAACATTGTTACAGGAGTCTTTGCTAGAAGGGGCTATAACATTCAGAGTTTAGCTGTAGGACATTCAGAAGTTGAAGGAATCTCTCGGCTTACAACTGTGGTTCCGGGTACAGATGAGTCAATCAGCAAGTTGGTGCAGCAATTGAATAAGTTAGTGGAGCTGCATGAGGTCCGGGATATAACCCACTTGCCATTTGCTGAGCGAGAATTGATGCTCATAAAGATTGCCGTAAATGCTGCTGCACGACGTGATGTTCTTGATATTGCCAGCATTTTCAGGGCTAAAGCTGTTGATGTGTCCGATCACACAATAACCCTCGAGGTAAAGTCTATTTTTTTTTCTTCGAATGGCAAATTAGCAGTTAGTACGTGTTAG
Protein sequence

>MsG0480023176.01.T01

MATTQTPIQTFKFTHSDSPSSFPSQPNSTTLFFPPTTSRRNNNNLILSAAATSGDTTVSSNGPPPSPSRSKVRRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNQDRALFTIVVSGTDRVLRQVVEQLQKLVNVLKVEDLSREPQVERELMLVKVHADPQNRAEIKWLVDTFRAKIVDISEDSVTIEVTGDPGKMVAVQRNFGKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKTAINALVGAKSVNPVDKTDTPVGGDVYPIEPSDSFTVNQVLDAQWGFLNDEDTSGIRSHTLSMLVNDAPGVLNIVTGVFARRGYNIQSLAVGHSEVEGISRLTTVVPGTDESISKLVQQLNKLVELHEVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLEVKSIFFSSNGKLAVSTC*