AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008912.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008912.01.T01 MTR_2g460760 96.359 357 13 0 1 357 1 357 0.0 682
MsG0280008912.01.T01 MTR_4g130860 70.081 371 97 6 34 401 26 385 2.94e-174 499
MsG0280008912.01.T01 MTR_2g460740 95.833 48 2 0 354 401 17 64 1.01e-23 99.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008912.01.T01 AT2G24200 67.941 340 103 3 62 401 4 337 5.27e-156 451
MsG0280008912.01.T01 AT2G24200 67.941 340 103 3 62 401 4 337 5.27e-156 451
MsG0280008912.01.T01 AT4G30920 68.406 345 99 5 60 401 63 400 1.25e-151 442
MsG0280008912.01.T01 AT4G30910 61.316 380 131 8 25 401 33 399 5.47e-140 412
MsG0280008912.01.T01 AT4G30910 64.928 345 111 5 60 401 62 399 1.40e-139 412
MsG0280008912.01.T01 AT2G24200 60.000 340 94 4 62 401 4 301 4.84e-128 378
MsG0280008912.01.T01 AT5G13940 72.917 48 13 0 294 341 66 113 1.00e-15 80.1

Find 114 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAATCACTTGATATTAT+TGG 0.174623 2:+41472779 MsG0280008912.01.T01:CDS
CAATAATATCAAGTGATTTA+AGG 0.213855 2:-41472778 None:intergenic
TTAAGTTTCTTCTCGAATTC+AGG 0.248834 2:-41472815 None:intergenic
GACTACTTGTGTTAGGTATC+TGG 0.263483 2:+41476346 MsG0280008912.01.T01:intron
TCTAAATTAGGCGGTTTATT+AGG 0.263788 2:+41472431 MsG0280008912.01.T01:CDS
TTTAAGGGCCGGTTTCTTCT+TGG 0.272500 2:-41472762 None:intergenic
GATATTATTGGTCTTGGAAC+AGG 0.287196 2:+41472791 MsG0280008912.01.T01:CDS
GTATCTTCTGGAATCATTCT+TGG 0.293774 2:+41472851 MsG0280008912.01.T01:CDS
TGAGCTCATGAAATTTGATA+TGG 0.294915 2:+41475683 MsG0280008912.01.T01:CDS
GCAGTGTAAGGAATTGAATA+TGG 0.300638 2:+41473798 MsG0280008912.01.T01:CDS
AGGTATCTGGTGGTATTGAT+AGG 0.322374 2:+41476359 MsG0280008912.01.T01:intron
TCACTTGATATTATTGGTCT+TGG 0.336063 2:+41472785 MsG0280008912.01.T01:CDS
GTGTTCTCAATATCTGATTC+TGG 0.337101 2:-41472403 None:intergenic
GCGATTGCAGAAGCAATGTT+AGG 0.343895 2:-41472689 None:intergenic
ATTGAATATGGGATCCTATC+TGG 0.350799 2:+41473810 MsG0280008912.01.T01:CDS
CTACCTGGTGTGAGCACATT+AGG 0.353631 2:-41472896 None:intergenic
CCGTCACAGCAACTGCTAAT+AGG 0.361373 2:-41472346 None:intergenic
AATAATATCAAGTGATTTAA+GGG 0.375912 2:-41472777 None:intergenic
AGAACACTAGACTCTAAATT+AGG 0.382808 2:+41472419 MsG0280008912.01.T01:CDS
TTTGGAGCAGCAAAGGCTAT+TGG 0.389431 2:+41475723 MsG0280008912.01.T01:CDS
AGGATAAATAAATACAGAAT+TGG 0.390622 2:+41471770 MsG0280008912.01.T01:five_prime_UTR
GTCCAGCAGCAGGTGTAATT+CGG 0.413560 2:-41472508 None:intergenic
TCCAAGAGACTCGCCTTGAT+TGG 0.429219 2:+41472536 MsG0280008912.01.T01:CDS
TTGTGAGAGAACAGAACATT+TGG 0.430239 2:+41471735 MsG0280008912.01.T01:five_prime_UTR
ATTACACCTGCTGCTGGACT+TGG 0.432997 2:+41472512 MsG0280008912.01.T01:CDS
GCCAATCAAGGCGAGTCTCT+TGG 0.434300 2:-41472537 None:intergenic
TCAGAAGTAGACTCGGTCTA+AGG 0.443475 2:+41471906 MsG0280008912.01.T01:CDS
ATTGCTTCTGCAATCGCCAC+TGG 0.445457 2:+41472695 MsG0280008912.01.T01:CDS
TATGCAGGAGATGTATCTTC+TGG 0.447764 2:+41472839 MsG0280008912.01.T01:CDS
ATGCCTCCTCGCGCCACTCT+CGG 0.454279 2:+41471992 MsG0280008912.01.T01:CDS
GACTGTCGTGGGAACATTTG+AGG 0.457993 2:+41472718 MsG0280008912.01.T01:CDS
ACATTTGGACATGACATGAT+AGG 0.461391 2:+41471750 MsG0280008912.01.T01:five_prime_UTR
GAGACGAGAAGAGGAGAATG+AGG 0.464529 2:-41471879 None:intergenic
CTGTGTTATAAACCACCAAC+TGG 0.477290 2:+41473874 MsG0280008912.01.T01:CDS
TTCTGGAATCATTCTTGGAC+GGG 0.477480 2:+41472856 MsG0280008912.01.T01:CDS
CGATTGCAGAAGCAATGTTA+GGG 0.480670 2:-41472688 None:intergenic
AATGCCAACTTGACATTGAC+AGG 0.483813 2:-41473898 None:intergenic
AAGTTGGCATTAGTCGGAAA+AGG 0.484155 2:+41473910 MsG0280008912.01.T01:CDS
ATTGGTCAAATCAAACCTCT+TGG 0.491039 2:+41475741 MsG0280008912.01.T01:CDS
CTGATGTGGCGGAATGGAAA+GGG 0.491199 2:+41472321 MsG0280008912.01.T01:CDS
GTCTGAGTCCAAGAAGAAAC+CGG 0.492672 2:+41472754 MsG0280008912.01.T01:CDS
TTCTGCAGCTAACTTCGCTC+AGG 0.495755 2:+41472616 MsG0280008912.01.T01:CDS
ATATCAAGTGATTTAAGGGC+CGG 0.505431 2:-41472773 None:intergenic
CTGCTCAGCATCCAATACTT+TGG 0.511072 2:-41473779 None:intergenic
ACATTGACAGGTCCAGTTGG+TGG 0.511434 2:-41473886 None:intergenic
AGTGAAGTCCTCTTCGGACG+AGG 0.513926 2:-41472459 None:intergenic
ATTGGATGCTGAGCAGTGTA+AGG 0.514214 2:+41473786 MsG0280008912.01.T01:CDS
AGTGAGAATAGTAGATGAGG+AGG 0.515044 2:-41471837 None:intergenic
GGCTGCAGCAACAGCCAGAT+AGG 0.519387 2:-41473824 None:intergenic
CCGCCTAATGTGCTCACACC+AGG 0.520105 2:+41472893 MsG0280008912.01.T01:CDS
CCTATTAGCAGTTGCTGTGA+CGG 0.521774 2:+41472346 MsG0280008912.01.T01:CDS
CTCTTCATCAGAAGTAGACT+CGG 0.522942 2:+41471899 MsG0280008912.01.T01:CDS
AATCGCCACTGGGACTGTCG+TGG 0.526073 2:+41472706 MsG0280008912.01.T01:CDS
AGTAGTGAGAATAGTAGATG+AGG 0.528530 2:-41471840 None:intergenic
AGATGAGCCGAGGCCAATCA+AGG 0.528615 2:-41472549 None:intergenic
TCGTCCGAAGAGGACTTCAC+TGG 0.529813 2:+41472461 MsG0280008912.01.T01:CDS
GAGCTCATGAAATTTGATAT+GGG 0.529929 2:+41475684 MsG0280008912.01.T01:CDS
CTCCGAATTACACCTGCTGC+TGG 0.532926 2:+41472506 MsG0280008912.01.T01:CDS
GCAGAGAGTCCTTGAGAAGT+GGG 0.535817 2:-41472665 None:intergenic
GAGGACTTCACTGGAAAACT+CGG 0.540308 2:+41472470 MsG0280008912.01.T01:CDS
GGCAGAGAGTCCTTGAGAAG+TGG 0.543326 2:-41472666 None:intergenic
TTGCTTCTGCAATCGCCACT+GGG 0.543365 2:+41472696 MsG0280008912.01.T01:CDS
CAGTGTAAGGAATTGAATAT+GGG 0.544881 2:+41473799 MsG0280008912.01.T01:CDS
GAGAAGAAACTTAAGTATGC+AGG 0.546266 2:+41472824 MsG0280008912.01.T01:CDS
CTGATACTGATGTGGCGGAA+TGG 0.546886 2:+41472315 MsG0280008912.01.T01:CDS
GGCATAATGAGGTTGCGGAC+AGG 0.548592 2:-41471974 None:intergenic
GAAGATATCATTTGCAGCGA+AGG 0.548980 2:+41472289 MsG0280008912.01.T01:intron
AATGTCAAGTTGGCATTAGT+CGG 0.549056 2:+41473904 MsG0280008912.01.T01:CDS
GGTGGCTACAATATAAAGAC+AGG 0.551468 2:+41475645 MsG0280008912.01.T01:CDS
ACTGATGTGGCGGAATGGAA+AGG 0.554911 2:+41472320 MsG0280008912.01.T01:CDS
CTTCTGGAATCATTCTTGGA+CGG 0.556172 2:+41472855 MsG0280008912.01.T01:CDS
TTGGATCCAAGTCCAGCAGC+AGG 0.562328 2:-41472518 None:intergenic
GGTATCTGGTGGTATTGATA+GGG 0.566478 2:+41476360 MsG0280008912.01.T01:intron
AGACTCGCCTTGATTGGCCT+CGG 0.567237 2:+41472542 MsG0280008912.01.T01:CDS
ATATTATTGGTCTTGGAACA+GGG 0.572432 2:+41472792 MsG0280008912.01.T01:CDS
GAGGAGGCATAATGAGGTTG+CGG 0.572965 2:-41471979 None:intergenic
ATGAGCTCAATCATACAGCC+AGG 0.573251 2:-41475669 None:intergenic
ATCGCCACTGGGACTGTCGT+GGG 0.578510 2:+41472707 MsG0280008912.01.T01:CDS
TGGACCTGTCAATGTCAAGT+TGG 0.580098 2:+41473894 MsG0280008912.01.T01:CDS
AATCAAACCTCTTGGAGTGG+AGG 0.584428 2:+41475749 MsG0280008912.01.T01:CDS
GTTGTTCTACCCACTTCTCA+AGG 0.589480 2:+41472656 MsG0280008912.01.T01:CDS
GGTTGCGGACAGGTACTTCG+CGG 0.599917 2:-41471964 None:intergenic
AAGCCGAGAGTGGCGCGAGG+AGG 0.600377 2:-41471995 None:intergenic
GGGGTGAGTGAAGCCGAGAG+TGG 0.604519 2:-41472005 None:intergenic
TAGAGGAAGCAGATGAGCCG+AGG 0.607505 2:-41472559 None:intergenic
TGGCGCGAGGAGGCATAATG+AGG 0.611619 2:-41471985 None:intergenic
TACAATATAAAGACAGGACC+TGG 0.618282 2:+41475651 MsG0280008912.01.T01:CDS
GTGAAGCCGAGAGTGGCGCG+AGG 0.619609 2:-41471998 None:intergenic
TCTGATGAAGAGACGAGAAG+AGG 0.620668 2:-41471888 None:intergenic
CTTCGCGGGTCAAACAAAGA+TGG 0.623294 2:-41471949 None:intergenic
TAACAGACCTCCACTCCAAG+AGG 0.623708 2:-41475756 None:intergenic
TAGAACAACGACAGCAACAT+CGG 0.625044 2:-41472642 None:intergenic
TTGACATTGACAGGTCCAGT+TGG 0.625230 2:-41473889 None:intergenic
TCAAATCAAACCTCTTGGAG+TGG 0.631046 2:+41475746 MsG0280008912.01.T01:CDS
ACACTAGACTCTAAATTAGG+CGG 0.637017 2:+41472422 MsG0280008912.01.T01:CDS
AGGTGAAGCCTCGTCCGAAG+AGG 0.638183 2:+41472451 MsG0280008912.01.T01:CDS
GTTGCGGACAGGTACTTCGC+GGG 0.641251 2:-41471963 None:intergenic
CTCATGAAATTTGATATGGG+TGG 0.641407 2:+41475687 MsG0280008912.01.T01:CDS
GGATACTGATACTGATGTGG+CGG 0.642793 2:+41472310 MsG0280008912.01.T01:CDS
ACTGCCGCATTTAAAACCCT+CGG 0.643946 2:+41472581 MsG0280008912.01.T01:CDS
TGATGTGGCGGAATGGAAAG+GGG 0.646316 2:+41472322 MsG0280008912.01.T01:CDS
CACAGATGAATAAACTGAGG+AGG 0.647289 2:-41473856 None:intergenic
TGATATGGGTGGATCAGCTG+CGG 0.648554 2:+41475698 MsG0280008912.01.T01:CDS
CCTGGTGTGAGCACATTAGG+CGG 0.655495 2:-41472893 None:intergenic
TACTTGTGTTAGGTATCTGG+TGG 0.656092 2:+41476349 MsG0280008912.01.T01:intron
GAAGGATACTGATACTGATG+TGG 0.662024 2:+41472307 MsG0280008912.01.T01:CDS
AACAAACGCACGGACCTTGG+GGG 0.670089 2:-41472041 None:intergenic
GATTGCAGAAGCAATGTTAG+GGG 0.690061 2:-41472687 None:intergenic
TAACACAGATGAATAAACTG+AGG 0.696832 2:-41473859 None:intergenic
CAGAAGCAACAGACTCACCG+AGG 0.700899 2:-41472598 None:intergenic
GTCAAACAAAGATGGCGTAG+CGG 0.704194 2:-41471941 None:intergenic
TGTTCCCACGACAGTCCCAG+TGG 0.709007 2:-41472711 None:intergenic
AAACTGAGGAGGATTTGCTG+AGG 0.722190 2:-41473845 None:intergenic
AGAAGCAACAGACTCACCGA+GGG 0.728785 2:-41472597 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATCAAGTGATTTAA+GGG - Chr2:41472780-41472799 None:intergenic 15.0%
!!! ATTTAAAATTGATTACTATG+TGG - Chr2:41473030-41473049 None:intergenic 15.0%
!!! TAATAGTTTCTAGAAATATA+TGG - Chr2:41474182-41474201 None:intergenic 15.0%
!!! TTTAAAATTGATTACTATGT+GGG - Chr2:41473029-41473048 None:intergenic 15.0%
!! ACAATAAATTTAAGCATCAA+GGG - Chr2:41475279-41475298 None:intergenic 20.0%
!! AGGATAAATAAATACAGAAT+TGG + Chr2:41471770-41471789 MsG0280008912.01.T01:five_prime_UTR 20.0%
!! ATAGTTTATTTGAATCAGTA+AGG + Chr2:41473233-41473252 MsG0280008912.01.T01:intron 20.0%
!! ATATCAGTCATTATTAGATA+AGG - Chr2:41474944-41474963 None:intergenic 20.0%
!! CAAATTATAGAAACAGTAAA+TGG + Chr2:41475875-41475894 MsG0280008912.01.T01:intron 20.0%
!! CAATAATATCAAGTGATTTA+AGG - Chr2:41472781-41472800 None:intergenic 20.0%
!! CGAAATATCATAAAAGTTTA+TGG - Chr2:41474249-41474268 None:intergenic 20.0%
!! CTTAAATCACTTGATATTAT+TGG + Chr2:41472779-41472798 MsG0280008912.01.T01:CDS 20.0%
!! TAGTTTATTTGAATCAGTAA+GGG + Chr2:41473234-41473253 MsG0280008912.01.T01:intron 20.0%
!! TGAAAAGGAAAAAATATACA+GGG - Chr2:41475791-41475810 None:intergenic 20.0%
!! TTATCTAATAATGACTGATA+TGG + Chr2:41474943-41474962 MsG0280008912.01.T01:intron 20.0%
!! TTCAAATAAACTATCAAGTT+CGG - Chr2:41473227-41473246 None:intergenic 20.0%
!! TTCAATGTATTAACTTTACA+AGG + Chr2:41475176-41475195 MsG0280008912.01.T01:intron 20.0%
!! TTGAAAAGGAAAAAATATAC+AGG - Chr2:41475792-41475811 None:intergenic 20.0%
!!! AAACTTGTTTTTATATTCGA+TGG + Chr2:41473286-41473305 MsG0280008912.01.T01:intron 20.0%
!!! AACTTGTTTTTATATTCGAT+GGG + Chr2:41473287-41473306 MsG0280008912.01.T01:intron 20.0%
!!! AAGGTTATTTTTGGATTTTT+AGG + Chr2:41474880-41474899 MsG0280008912.01.T01:intron 20.0%
!!! AGGTTATTTTTGGATTTTTA+GGG + Chr2:41474881-41474900 MsG0280008912.01.T01:intron 20.0%
!!! AGTTGAATTGAGAATTTTAT+TGG + Chr2:41473418-41473437 MsG0280008912.01.T01:intron 20.0%
!!! CCAAAAAATATTCTTTGAAA+AGG - Chr2:41475806-41475825 None:intergenic 20.0%
!!! CCTTTTCAAAGAATATTTTT+TGG + Chr2:41475803-41475822 MsG0280008912.01.T01:intron 20.0%
!!! TCTCATTTTAAGGTTATTTT+TGG + Chr2:41474871-41474890 MsG0280008912.01.T01:intron 20.0%
!!! TGATCAATTGTTGATTTAAA+AGG - Chr2:41475234-41475253 None:intergenic 20.0%
!!! TTTACTGTTTCTATAATTTG+AGG - Chr2:41475875-41475894 None:intergenic 20.0%
! AAATCGTAATAGTTACATGA+AGG + Chr2:41475383-41475402 MsG0280008912.01.T01:intron 25.0%
! AACATAACTGATTATGATAC+AGG - Chr2:41473510-41473529 None:intergenic 25.0%
! ACATAACTGATTATGATACA+GGG - Chr2:41473509-41473528 None:intergenic 25.0%
! ATAATTCAATTCTCTGTACA+TGG + Chr2:41475145-41475164 MsG0280008912.01.T01:intron 25.0%
! ATAGCATATCTACAACAATA+AGG - Chr2:41475038-41475057 None:intergenic 25.0%
! ATTATCCTTAAGTGAAATCT+TGG - Chr2:41476146-41476165 None:intergenic 25.0%
! CAATTAGAATGATAAACTAC+TGG + Chr2:41474222-41474241 MsG0280008912.01.T01:intron 25.0%
! CACAATCTAAACTAAAAACT+AGG - Chr2:41475502-41475521 None:intergenic 25.0%
! CAGTAGTTTATCATTCTAAT+TGG - Chr2:41474224-41474243 None:intergenic 25.0%
! GACAATAAATTTAAGCATCA+AGG - Chr2:41475280-41475299 None:intergenic 25.0%
! TAAAAAAAGAAACAAACGCA+CGG - Chr2:41472054-41472073 None:intergenic 25.0%
! TAAAATGAGAATTTACAGAG+AGG - Chr2:41474861-41474880 None:intergenic 25.0%
! TATATCACAAAATGAAGTAC+AGG + Chr2:41474353-41474372 MsG0280008912.01.T01:intron 25.0%
! TGATACATGACTCTTAAAAA+AGG - Chr2:41475073-41475092 None:intergenic 25.0%
! TTATCCTTAAGTGAAATCTT+GGG - Chr2:41476145-41476164 None:intergenic 25.0%
! TTGCCTAGATTGATAAATAA+GGG + Chr2:41475529-41475548 MsG0280008912.01.T01:intron 25.0%
! TTGTATAAACACAGATGAAT+AGG - Chr2:41473975-41473994 None:intergenic 25.0%
! TTTAAACATATTCTAACGTG+TGG - Chr2:41474429-41474448 None:intergenic 25.0%
!! ATCAAAGCACTCAATAAATT+TGG + Chr2:41473126-41473145 MsG0280008912.01.T01:intron 25.0%
!! CAATCTATTGATAACTTGAT+GGG + Chr2:41475430-41475449 MsG0280008912.01.T01:intron 25.0%
!! CTATTCTTTGAAAACTTAGA+AGG - Chr2:41476270-41476289 None:intergenic 25.0%
!! CTCTGTAAATTCTCATTTTA+AGG + Chr2:41474861-41474880 MsG0280008912.01.T01:intron 25.0%
!! CTTTGTTTGAAACAATGTTA+TGG + Chr2:41474021-41474040 MsG0280008912.01.T01:intron 25.0%
!! TAACCCTTATTTATCAATCT+AGG - Chr2:41475535-41475554 None:intergenic 25.0%
!! TCAATCTATTGATAACTTGA+TGG + Chr2:41475429-41475448 MsG0280008912.01.T01:intron 25.0%
!!! AACAATACTTTAAAGTCAGA+AGG - Chr2:41476312-41476331 None:intergenic 25.0%
!!! AATTTCTGGAATAGAAAGAT+TGG - Chr2:41476118-41476137 None:intergenic 25.0%
!!! TCTTTTTGTTATTGTGTTAG+TGG + Chr2:41475624-41475643 MsG0280008912.01.T01:intron 25.0%
AAAATACCTGCTTGTTTGTT+TGG + Chr2:41472973-41472992 MsG0280008912.01.T01:intron 30.0%
AAACACTAATAAGTGAGTGT+TGG - Chr2:41472261-41472280 None:intergenic 30.0%
AAAGCAATAACCTTCGAATT+TGG - Chr2:41474473-41474492 None:intergenic 30.0%
AAATACCTGCTTGTTTGTTT+GGG + Chr2:41472974-41472993 MsG0280008912.01.T01:intron 30.0%
AAATATTGAGGAATATTCCG+CGG + Chr2:41473585-41473604 MsG0280008912.01.T01:intron 30.0%
AAGTGAAAGATAACTGCTAA+AGG + Chr2:41475938-41475957 MsG0280008912.01.T01:intron 30.0%
AATAACCTTCGAATTTGGAA+GGG - Chr2:41474468-41474487 None:intergenic 30.0%
AATCTCTTATTCTTTGTTGG+TGG - Chr2:41473634-41473653 None:intergenic 30.0%
AATGTAAAGTGCAATTCAGA+TGG - Chr2:41475346-41475365 None:intergenic 30.0%
AGAACACTAGACTCTAAATT+AGG + Chr2:41472419-41472438 MsG0280008912.01.T01:CDS 30.0%
AGAGTGGAATTCAGTTATAA+TGG - Chr2:41475995-41476014 None:intergenic 30.0%
ATAAACACAGATGAATAGGT+TGG - Chr2:41473971-41473990 None:intergenic 30.0%
ATCTGTGTTTATACAATGCT+TGG + Chr2:41473979-41473998 MsG0280008912.01.T01:intron 30.0%
ATGTTTGTATGTGAATTACG+TGG + Chr2:41473525-41473544 MsG0280008912.01.T01:intron 30.0%
CAAGTATAAAAACGCTGTAA+TGG + Chr2:41474330-41474349 MsG0280008912.01.T01:intron 30.0%
CAGTGTAAGGAATTGAATAT+GGG + Chr2:41473799-41473818 MsG0280008912.01.T01:CDS 30.0%
CCAAATCTCTTATTCTTTGT+TGG - Chr2:41473637-41473656 None:intergenic 30.0%
CCAACAAAGAATAAGAGATT+TGG + Chr2:41473634-41473653 MsG0280008912.01.T01:intron 30.0%
GAAAAAAGAAACGAAACAGA+AGG + Chr2:41474754-41474773 MsG0280008912.01.T01:intron 30.0%
GAAAAGAAGATGGAAAGAAT+AGG + Chr2:41473471-41473490 MsG0280008912.01.T01:intron 30.0%
GAGCTCATGAAATTTGATAT+GGG + Chr2:41475684-41475703 MsG0280008912.01.T01:CDS 30.0%
GAGTGGAATTCAGTTATAAT+GGG - Chr2:41475994-41476013 None:intergenic 30.0%
GTAGTTAAATAGTAGATCTG+CGG - Chr2:41475115-41475134 None:intergenic 30.0%
GTTGCCTAGATTGATAAATA+AGG + Chr2:41475528-41475547 MsG0280008912.01.T01:intron 30.0%
TAAACACAGATGAATAGGTT+GGG - Chr2:41473970-41473989 None:intergenic 30.0%
TAACACAAGTAGTCAAGAAA+AGG - Chr2:41476340-41476359 None:intergenic 30.0%
TAACACAGATGAATAAACTG+AGG - Chr2:41473862-41473881 None:intergenic 30.0%
TCTAAATTAGGCGGTTTATT+AGG + Chr2:41472431-41472450 MsG0280008912.01.T01:CDS 30.0%
TCTAATAATGACTGATATGG+CGG + Chr2:41474946-41474965 MsG0280008912.01.T01:intron 30.0%
TGAGCTCATGAAATTTGATA+TGG + Chr2:41475683-41475702 MsG0280008912.01.T01:CDS 30.0%
TGATATGCAATTTGACCATT+TGG + Chr2:41476057-41476076 MsG0280008912.01.T01:intron 30.0%
TTAAGTTTCTTCTCGAATTC+AGG - Chr2:41472818-41472837 None:intergenic 30.0%
TTACATGAAGGTCATATTGT+TGG + Chr2:41475395-41475414 MsG0280008912.01.T01:intron 30.0%
TTGCATTGTATTGCATTTGT+AGG - Chr2:41472227-41472246 None:intergenic 30.0%
! AAAGCACTCAATAAATTTGG+TGG + Chr2:41473129-41473148 MsG0280008912.01.T01:intron 30.0%
! AAATCTTGGGTTCTAATTTC+TGG - Chr2:41476132-41476151 None:intergenic 30.0%
! AAGGTCTAATCTAACTTTTG+AGG - Chr2:41475844-41475863 None:intergenic 30.0%
! ATAATTTGAGGTTCACATCA+AGG - Chr2:41475863-41475882 None:intergenic 30.0%
! ATTTAAAATGTGGAGAAGTG+AGG + Chr2:41472104-41472123 MsG0280008912.01.T01:intron 30.0%
! CAGAAATGCAGAAGTATATT+AGG - Chr2:41473666-41473685 None:intergenic 30.0%
! CATTACAGCGTTTTTATACT+TGG - Chr2:41474332-41474351 None:intergenic 30.0%
! CTATTGCACTTGACTTTTAT+TGG - Chr2:41474708-41474727 None:intergenic 30.0%
! CTTTATGAATTGTTTTCCAC+AGG + Chr2:41473700-41473719 MsG0280008912.01.T01:intron 30.0%
! GTAAATGGAAGAAAAGCATA+TGG + Chr2:41475890-41475909 MsG0280008912.01.T01:intron 30.0%
! TCACTTGATATTATTGGTCT+TGG + Chr2:41472785-41472804 MsG0280008912.01.T01:CDS 30.0%
! TGCAGAAGTATATTAGGATT+TGG - Chr2:41473660-41473679 None:intergenic 30.0%
! TGTCACACTATAGCATTTTT+GGG + Chr2:41474600-41474619 MsG0280008912.01.T01:intron 30.0%
! TTTTCTTGACTACTTGTGTT+AGG + Chr2:41476339-41476358 MsG0280008912.01.T01:intron 30.0%
!! ATATTATTGGTCTTGGAACA+GGG + Chr2:41472792-41472811 MsG0280008912.01.T01:CDS 30.0%
!! ATTTGGAATGATTGATGATG+TGG - Chr2:41476021-41476040 None:intergenic 30.0%
!!! CTTTTTTCACTTCAGACTTT+TGG - Chr2:41474742-41474761 None:intergenic 30.0%
!!! TTTTGTTATTGTGTTAGTGG+TGG + Chr2:41475627-41475646 MsG0280008912.01.T01:intron 30.0%
AAAAACCCTTCCAAATTCGA+AGG + Chr2:41474460-41474479 MsG0280008912.01.T01:intron 35.0%
AAAGTGCAATTCAGATGGTA+TGG - Chr2:41475341-41475360 None:intergenic 35.0%
AAATTGCATATCAGCAGAAG+AGG - Chr2:41476050-41476069 None:intergenic 35.0%
ACACTAGACTCTAAATTAGG+CGG + Chr2:41472422-41472441 MsG0280008912.01.T01:CDS 35.0%
ACATTTGGACATGACATGAT+AGG + Chr2:41471750-41471769 MsG0280008912.01.T01:five_prime_UTR 35.0%
AGAACCCAAGATTTCACTTA+AGG + Chr2:41476138-41476157 MsG0280008912.01.T01:intron 35.0%
AGCAGTTATCTTTCACTTTC+AGG - Chr2:41475936-41475955 None:intergenic 35.0%
AGTAGTGAGAATAGTAGATG+AGG - Chr2:41471843-41471862 None:intergenic 35.0%
ATAGACACTTGACACTTGTT+AGG + Chr2:41474079-41474098 MsG0280008912.01.T01:intron 35.0%
ATATCAAGTGATTTAAGGGC+CGG - Chr2:41472776-41472795 None:intergenic 35.0%
ATTGAATATGGGATCCTATC+TGG + Chr2:41473810-41473829 MsG0280008912.01.T01:CDS 35.0%
ATTGGTCAAATCAAACCTCT+TGG + Chr2:41475741-41475760 MsG0280008912.01.T01:CDS 35.0%
CAATAACCTTCGAATTTGGA+AGG - Chr2:41474469-41474488 None:intergenic 35.0%
CAATTTAACAGTTGTGGCAT+CGG - Chr2:41474991-41475010 None:intergenic 35.0%
CATCAATCATTCCAAATCGT+CGG + Chr2:41476024-41476043 MsG0280008912.01.T01:intron 35.0%
CTCATGAAATTTGATATGGG+TGG + Chr2:41475687-41475706 MsG0280008912.01.T01:CDS 35.0%
CTGGAATAGAAAGATTGGTA+AGG - Chr2:41476113-41476132 None:intergenic 35.0%
GAGAAGAAACTTAAGTATGC+AGG + Chr2:41472824-41472843 MsG0280008912.01.T01:CDS 35.0%
GCAGTGTAAGGAATTGAATA+TGG + Chr2:41473798-41473817 MsG0280008912.01.T01:CDS 35.0%
GGTTTATCCATTGAAGAGTT+TGG + Chr2:41474152-41474171 MsG0280008912.01.T01:intron 35.0%
GTATCGCAACAAAAAATGTC+AGG + Chr2:41471809-41471828 MsG0280008912.01.T01:exon 35.0%
GTGTTCTCAATATCTGATTC+TGG - Chr2:41472406-41472425 None:intergenic 35.0%
GTTATCGAACTTCAGAGTTT+AGG + Chr2:41472999-41473018 MsG0280008912.01.T01:intron 35.0%
TAAATTTAGCCGCTGCATAT+TGG - Chr2:41476189-41476208 None:intergenic 35.0%
TACAATATAAAGACAGGACC+TGG + Chr2:41475651-41475670 MsG0280008912.01.T01:CDS 35.0%
TGGACTTTCATTCCTCAATT+GGG + Chr2:41476077-41476096 MsG0280008912.01.T01:intron 35.0%
TGTATGTGAATTACGTGGTA+AGG + Chr2:41473530-41473549 MsG0280008912.01.T01:intron 35.0%
TTAATACGAAGTTACCTACC+TGG - Chr2:41472914-41472933 None:intergenic 35.0%
TTGAGGAATGAAAGTCCAAA+TGG - Chr2:41476075-41476094 None:intergenic 35.0%
TTGGACTTTCATTCCTCAAT+TGG + Chr2:41476076-41476095 MsG0280008912.01.T01:intron 35.0%
TTGTGAGAGAACAGAACATT+TGG + Chr2:41471735-41471754 MsG0280008912.01.T01:five_prime_UTR 35.0%
! AAACAAGCAGGTATTTTGTG+AGG - Chr2:41472970-41472989 None:intergenic 35.0%
! AACAAGCAGGTATTTTGTGA+GGG - Chr2:41472969-41472988 None:intergenic 35.0%
! CTATTGATAACTTGATGGGT+TGG + Chr2:41475434-41475453 MsG0280008912.01.T01:intron 35.0%
! CTGTCACACTATAGCATTTT+TGG + Chr2:41474599-41474618 MsG0280008912.01.T01:intron 35.0%
! TAGACACTTGACACTTGTTA+GGG + Chr2:41474080-41474099 MsG0280008912.01.T01:intron 35.0%
! TGAGATTTTGCATGTCTGTA+TGG + Chr2:41473330-41473349 MsG0280008912.01.T01:intron 35.0%
! TGTTTTCACTGCCAAAGTAT+TGG + Chr2:41473768-41473787 MsG0280008912.01.T01:CDS 35.0%
!! AATGTCAAGTTGGCATTAGT+CGG + Chr2:41473904-41473923 MsG0280008912.01.T01:CDS 35.0%
!! ATTGTTTTCCACAGGAGTAT+TGG + Chr2:41473708-41473727 MsG0280008912.01.T01:intron 35.0%
!! CGATTCTAAAGCAAATGTGT+AGG - Chr2:41473196-41473215 None:intergenic 35.0%
!! GAAAAGGTTTGACTTTTGAC+AGG + Chr2:41473926-41473945 MsG0280008912.01.T01:CDS 35.0%
!! GATATTATTGGTCTTGGAAC+AGG + Chr2:41472791-41472810 MsG0280008912.01.T01:CDS 35.0%
!! GTATCTTCTGGAATCATTCT+TGG + Chr2:41472851-41472870 MsG0280008912.01.T01:CDS 35.0%
!! TGAGTATCGAGTATTGATAG+TGG + Chr2:41474116-41474135 MsG0280008912.01.T01:intron 35.0%
!! TGAGTTTAGCTCTGTTGATA+GGG - Chr2:41472173-41472192 None:intergenic 35.0%
!! TTATAATGGGTAGCAGAGAA+CGG - Chr2:41475981-41476000 None:intergenic 35.0%
!! TTCATTTTTCATTCTCTCCC+TGG + Chr2:41474572-41474591 MsG0280008912.01.T01:intron 35.0%
AAACGAAACAGAAGGAATCC+TGG + Chr2:41474762-41474781 MsG0280008912.01.T01:intron 40.0%
AACGAAACAGAAGGAATCCT+GGG + Chr2:41474763-41474782 MsG0280008912.01.T01:intron 40.0%
AAGTTGGCATTAGTCGGAAA+AGG + Chr2:41473910-41473929 MsG0280008912.01.T01:CDS 40.0%
AATGCCAACTTGACATTGAC+AGG - Chr2:41473901-41473920 None:intergenic 40.0%
AGAGTAAGATAGAGTGAGTG+AGG - Chr2:41474548-41474567 None:intergenic 40.0%
AGTGAGAATAGTAGATGAGG+AGG - Chr2:41471840-41471859 None:intergenic 40.0%
CAATACTCGATACTCAACCA+TGG - Chr2:41474112-41474131 None:intergenic 40.0%
CACAAAATGAAGTACAGGAG+CGG + Chr2:41474358-41474377 MsG0280008912.01.T01:intron 40.0%
CACAGATGAATAAACTGAGG+AGG - Chr2:41473859-41473878 None:intergenic 40.0%
CCATTTCAACCAATATGCAG+CGG + Chr2:41476177-41476196 MsG0280008912.01.T01:intron 40.0%
CGATTGCAGAAGCAATGTTA+GGG - Chr2:41472691-41472710 None:intergenic 40.0%
CTCTTCATCAGAAGTAGACT+CGG + Chr2:41471899-41471918 MsG0280008912.01.T01:CDS 40.0%
CTGTGTTATAAACCACCAAC+TGG + Chr2:41473874-41473893 MsG0280008912.01.T01:CDS 40.0%
GAAGATATCATTTGCAGCGA+AGG + Chr2:41472289-41472308 MsG0280008912.01.T01:intron 40.0%
GAAGCGCAATTCATACAGTA+AGG - Chr2:41475210-41475229 None:intergenic 40.0%
GAAGGATACTGATACTGATG+TGG + Chr2:41472307-41472326 MsG0280008912.01.T01:CDS 40.0%
GAATTTACAGAGAGGAGCTA+AGG - Chr2:41474853-41474872 None:intergenic 40.0%
GACTACTTGTGTTAGGTATC+TGG + Chr2:41476346-41476365 MsG0280008912.01.T01:intron 40.0%
GATATTGCATGGTATATGCG+GGG - Chr2:41472151-41472170 None:intergenic 40.0%
GATTGCAGAAGCAATGTTAG+GGG - Chr2:41472690-41472709 None:intergenic 40.0%
GCAAGGAAAGGAAAAGAAGA+TGG + Chr2:41473461-41473480 MsG0280008912.01.T01:intron 40.0%
GCATGTCTGTATGGTTCATA+AGG + Chr2:41473339-41473358 MsG0280008912.01.T01:intron 40.0%
GGATATTGCATGGTATATGC+GGG - Chr2:41472152-41472171 None:intergenic 40.0%
GGGATATTGCATGGTATATG+CGG - Chr2:41472153-41472172 None:intergenic 40.0%
GGTGGCTACAATATAAAGAC+AGG + Chr2:41475645-41475664 MsG0280008912.01.T01:CDS 40.0%
TACTTGTGTTAGGTATCTGG+TGG + Chr2:41476349-41476368 MsG0280008912.01.T01:intron 40.0%
TAGAACAACGACAGCAACAT+CGG - Chr2:41472645-41472664 None:intergenic 40.0%
TAGAGAGCTGGGAAATATTG+AGG + Chr2:41473573-41473592 MsG0280008912.01.T01:intron 40.0%
TAGGCGCAATTTAACAGTTG+TGG - Chr2:41474997-41475016 None:intergenic 40.0%
TATGCAGGAGATGTATCTTC+TGG + Chr2:41472839-41472858 MsG0280008912.01.T01:CDS 40.0%
TCAAATCAAACCTCTTGGAG+TGG + Chr2:41475746-41475765 MsG0280008912.01.T01:CDS 40.0%
TGAATTACGTGGTAAGGAGA+AGG + Chr2:41473536-41473555 MsG0280008912.01.T01:intron 40.0%
! ATCTCGTAGTTTGTAGAGCA+AGG + Chr2:41473444-41473463 MsG0280008912.01.T01:intron 40.0%
! CTGTTGATAGGGATATTGCA+TGG - Chr2:41472162-41472181 None:intergenic 40.0%
! GAGCTCGCACATTTAAAATG+TGG + Chr2:41472094-41472113 MsG0280008912.01.T01:intron 40.0%
! GCATATTGGTTGAAATGGCA+AGG - Chr2:41476175-41476194 None:intergenic 40.0%
! GTAGTTTGTAGAGCAAGGAA+AGG + Chr2:41473449-41473468 MsG0280008912.01.T01:intron 40.0%
! TTTTCCAGTGAAGTCCTCTT+CGG - Chr2:41472468-41472487 None:intergenic 40.0%
!! AAGGTTATTGCTTTTGCCAG+GGG + Chr2:41474479-41474498 MsG0280008912.01.T01:intron 40.0%
!! AGGTATCTGGTGGTATTGAT+AGG + Chr2:41476359-41476378 MsG0280008912.01.T01:intron 40.0%
!! CAGATGAATAGGTTGGGTTT+TGG - Chr2:41473964-41473983 None:intergenic 40.0%
!! CTAATAAGTGAGTGTTGGCA+TGG - Chr2:41472256-41472275 None:intergenic 40.0%
!! CTTCTGGAATCATTCTTGGA+CGG + Chr2:41472855-41472874 MsG0280008912.01.T01:CDS 40.0%
!! GAAGGTTATTGCTTTTGCCA+GGG + Chr2:41474478-41474497 MsG0280008912.01.T01:intron 40.0%
!! GGTATCTGGTGGTATTGATA+GGG + Chr2:41476360-41476379 MsG0280008912.01.T01:intron 40.0%
!! GTGAGTTTAGCTCTGTTGAT+AGG - Chr2:41472174-41472193 None:intergenic 40.0%
!! TTCTGGAATCATTCTTGGAC+GGG + Chr2:41472856-41472875 MsG0280008912.01.T01:CDS 40.0%
AACCTCCCAAACAAACAAGC+AGG - Chr2:41472982-41473001 None:intergenic 45.0%
AATCAAACCTCTTGGAGTGG+AGG + Chr2:41475749-41475768 MsG0280008912.01.T01:CDS 45.0%
ACAGGAGCGGTTTAGTGTTA+TGG + Chr2:41474371-41474390 MsG0280008912.01.T01:intron 45.0%
ATAGTAGATCTGCGGTGCAA+TGG - Chr2:41475107-41475126 None:intergenic 45.0%
ATGAGCTCAATCATACAGCC+AGG - Chr2:41475672-41475691 None:intergenic 45.0%
ATTACGTGGTAAGGAGAAGG+AGG + Chr2:41473539-41473558 MsG0280008912.01.T01:intron 45.0%
ATTGGATGCTGAGCAGTGTA+AGG + Chr2:41473786-41473805 MsG0280008912.01.T01:CDS 45.0%
CAAGTAGTTACAACGATCCG+CGG - Chr2:41473605-41473624 None:intergenic 45.0%
CAATAAGGCCCTCAAACCTA+TGG - Chr2:41475023-41475042 None:intergenic 45.0%
CCAAAACCAGGTGCAAATTC+AGG + Chr2:41473170-41473189 MsG0280008912.01.T01:intron 45.0%
CCTATTAGCAGTTGCTGTGA+CGG + Chr2:41472346-41472365 MsG0280008912.01.T01:CDS 45.0%
CTGCTCAGCATCCAATACTT+TGG - Chr2:41473782-41473801 None:intergenic 45.0%
GAGGACTTCACTGGAAAACT+CGG + Chr2:41472470-41472489 MsG0280008912.01.T01:CDS 45.0%
GCGATTGCAGAAGCAATGTT+AGG - Chr2:41472692-41472711 None:intergenic 45.0%
GGATACTGATACTGATGTGG+CGG + Chr2:41472310-41472329 MsG0280008912.01.T01:CDS 45.0%
GGCCAAAATAGCTGATGTTG+CGG + Chr2:41474392-41474411 MsG0280008912.01.T01:intron 45.0%
GGTCTGATAGAACCCAATTG+AGG - Chr2:41476092-41476111 None:intergenic 45.0%
GTAGCAGAGAACGGTACATT+AGG - Chr2:41475972-41475991 None:intergenic 45.0%
GTCAAACAAAGATGGCGTAG+CGG - Chr2:41471944-41471963 None:intergenic 45.0%
GTCTGAGTCCAAGAAGAAAC+CGG + Chr2:41472754-41472773 MsG0280008912.01.T01:CDS 45.0%
GTTGTTCTACCCACTTCTCA+AGG + Chr2:41472656-41472675 MsG0280008912.01.T01:CDS 45.0%
TAAATTGCGCCTACCACCAT+AGG + Chr2:41475004-41475023 MsG0280008912.01.T01:intron 45.0%
TACCTGCTTGTTTGTTTGGG+AGG + Chr2:41472977-41472996 MsG0280008912.01.T01:intron 45.0%
TAGTAGATCTGCGGTGCAAT+GGG - Chr2:41475106-41475125 None:intergenic 45.0%
TATAGTGTGACAGCTGACCA+GGG - Chr2:41474592-41474611 None:intergenic 45.0%
TCAACAGAGCTAAACTCACG+AGG + Chr2:41472175-41472194 MsG0280008912.01.T01:intron 45.0%
TCGGAATTTCGCAGACAAAC+TGG - Chr2:41474825-41474844 None:intergenic 45.0%
TCTGATGAAGAGACGAGAAG+AGG - Chr2:41471891-41471910 None:intergenic 45.0%
TGGACCTGTCAATGTCAAGT+TGG + Chr2:41473894-41473913 MsG0280008912.01.T01:CDS 45.0%
TGGTGCACCAAACTCTTCAA+TGG - Chr2:41474162-41474181 None:intergenic 45.0%
TTACGTGGTAAGGAGAAGGA+GGG + Chr2:41473540-41473559 MsG0280008912.01.T01:intron 45.0%
TTCTTCTGCCAATACTCCTG+TGG - Chr2:41473719-41473738 None:intergenic 45.0%
TTGACATTGACAGGTCCAGT+TGG - Chr2:41473892-41473911 None:intergenic 45.0%
! ACTGCCGCATTTAAAACCCT+CGG + Chr2:41472581-41472600 MsG0280008912.01.T01:CDS 45.0%
! ACTTGTTAGGGTAGTGACCA+TGG + Chr2:41474092-41474111 MsG0280008912.01.T01:intron 45.0%
! ATGTGCGAGCTCTAACAACT+AGG - Chr2:41472086-41472105 None:intergenic 45.0%
! CCGCTGCATATTGGTTGAAA+TGG - Chr2:41476180-41476199 None:intergenic 45.0%
! CCTGAATTTGCACCTGGTTT+TGG - Chr2:41473173-41473192 None:intergenic 45.0%
! GAGAGGAGCTAAGGTCTTTT+CGG - Chr2:41474844-41474863 None:intergenic 45.0%
! TCAGAAGTAGACTCGGTCTA+AGG + Chr2:41471906-41471925 MsG0280008912.01.T01:CDS 45.0%
! TCGCAGACAAACTGGCTTAA+GGG - Chr2:41474817-41474836 None:intergenic 45.0%
! TGCCGCAACATCAGCTATTT+TGG - Chr2:41474397-41474416 None:intergenic 45.0%
! TTCGCAGACAAACTGGCTTA+AGG - Chr2:41474818-41474837 None:intergenic 45.0%
! TTTAAGGGCCGGTTTCTTCT+TGG - Chr2:41472765-41472784 None:intergenic 45.0%
!! AAACTGAGGAGGATTTGCTG+AGG - Chr2:41473848-41473867 None:intergenic 45.0%
!! ATCGAGTATTGATAGTGGCG+TGG + Chr2:41474121-41474140 MsG0280008912.01.T01:intron 45.0%
!! ATTCGATGGGTTGTAACTGC+TGG + Chr2:41473300-41473319 MsG0280008912.01.T01:intron 45.0%
!! ATTGATGATGTGGCAGAGAG+TGG - Chr2:41476011-41476030 None:intergenic 45.0%
!! CGAAGGTTATTGCTTTTGCC+AGG + Chr2:41474477-41474496 MsG0280008912.01.T01:intron 45.0%
!! CTTGATGGGTTGGAAGCAAT+AGG + Chr2:41475444-41475463 MsG0280008912.01.T01:intron 45.0%
!! GCAAAATCCAAAAGTACCCC+TGG - Chr2:41474498-41474517 None:intergenic 45.0%
!! TGTCCTTTGAAGCCAAAACC+AGG + Chr2:41473158-41473177 MsG0280008912.01.T01:intron 45.0%
!!! CTCACCGAGGGTTTTAAATG+CGG - Chr2:41472588-41472607 None:intergenic 45.0%
!!! GGTTTTAAATGCGGCAGTAG+AGG - Chr2:41472579-41472598 None:intergenic 45.0%
AAACAAACGCACGGACCTTG+GGG - Chr2:41472045-41472064 None:intergenic 50.0%
AACCTATTGAGCCGCACAGT+GGG - Chr2:41474912-41474931 None:intergenic 50.0%
ACATTGACAGGTCCAGTTGG+TGG - Chr2:41473889-41473908 None:intergenic 50.0%
AGAAACAAACGCACGGACCT+TGG - Chr2:41472047-41472066 None:intergenic 50.0%
AGAAGCAACAGACTCACCGA+GGG - Chr2:41472600-41472619 None:intergenic 50.0%
ATTACACCTGCTGCTGGACT+TGG + Chr2:41472512-41472531 MsG0280008912.01.T01:CDS 50.0%
ATTGCTTCTGCAATCGCCAC+TGG + Chr2:41472695-41472714 MsG0280008912.01.T01:CDS 50.0%
CCGTCACAGCAACTGCTAAT+AGG - Chr2:41472349-41472368 None:intergenic 50.0%
CTAATGTGCTCACACCAGGT+AGG + Chr2:41472897-41472916 MsG0280008912.01.T01:intron 50.0%
CTACCTGGTGTGAGCACATT+AGG - Chr2:41472899-41472918 None:intergenic 50.0%
CTATAGTGTGACAGCTGACC+AGG - Chr2:41474593-41474612 None:intergenic 50.0%
CTTCGCGGGTCAAACAAAGA+TGG - Chr2:41471952-41471971 None:intergenic 50.0%
GAAACAAACGCACGGACCTT+GGG - Chr2:41472046-41472065 None:intergenic 50.0%
GACTGTCGTGGGAACATTTG+AGG + Chr2:41472718-41472737 MsG0280008912.01.T01:CDS 50.0%
GAGACGAGAAGAGGAGAATG+AGG - Chr2:41471882-41471901 None:intergenic 50.0%
GCAGAGAGTCCTTGAGAAGT+GGG - Chr2:41472668-41472687 None:intergenic 50.0%
GCCTACCACCATAGGTTTGA+GGG + Chr2:41475012-41475031 MsG0280008912.01.T01:intron 50.0%
GCTTCGATGTACCCCTATCT+GGG - Chr2:41474310-41474329 None:intergenic 50.0%
GTCCAGCAGCAGGTGTAATT+CGG - Chr2:41472511-41472530 None:intergenic 50.0%
TAACAGACCTCCACTCCAAG+AGG - Chr2:41475759-41475778 None:intergenic 50.0%
TAAGGCCCTCAAACCTATGG+TGG - Chr2:41475020-41475039 None:intergenic 50.0%
TCCAAGAGACTCGCCTTGAT+TGG + Chr2:41472536-41472555 MsG0280008912.01.T01:CDS 50.0%
TCCCAGCTCTCTATAACCAG+CGG - Chr2:41473566-41473585 None:intergenic 50.0%
TCGTGTGATGCTTTCATCCC+AGG - Chr2:41474783-41474802 None:intergenic 50.0%
TGATATGGGTGGATCAGCTG+CGG + Chr2:41475698-41475717 MsG0280008912.01.T01:CDS 50.0%
TGTAGGCCTGAATTTGCACC+TGG - Chr2:41473179-41473198 None:intergenic 50.0%
TTCAGATGGTATGGAGCCTG+AGG - Chr2:41475332-41475351 None:intergenic 50.0%
TTCTGCAGCTAACTTCGCTC+AGG + Chr2:41472616-41472635 MsG0280008912.01.T01:CDS 50.0%
TTGCTTCTGCAATCGCCACT+GGG + Chr2:41472696-41472715 MsG0280008912.01.T01:CDS 50.0%
TTGTCAACCCCACCCAGATA+GGG + Chr2:41474295-41474314 MsG0280008912.01.T01:intron 50.0%
! ACTGATGTGGCGGAATGGAA+AGG + Chr2:41472320-41472339 MsG0280008912.01.T01:CDS 50.0%
! CTGATACTGATGTGGCGGAA+TGG + Chr2:41472315-41472334 MsG0280008912.01.T01:CDS 50.0%
! CTGATGTGGCGGAATGGAAA+GGG + Chr2:41472321-41472340 MsG0280008912.01.T01:CDS 50.0%
! GAGGAGGCATAATGAGGTTG+CGG - Chr2:41471982-41472001 None:intergenic 50.0%
! TGATGTGGCGGAATGGAAAG+GGG + Chr2:41472322-41472341 MsG0280008912.01.T01:CDS 50.0%
!! GATAGTGGCGTGGTTTTGCA+TGG + Chr2:41474131-41474150 MsG0280008912.01.T01:intron 50.0%
!!! GCACCTGGTTTTGGCTTCAA+AGG - Chr2:41473164-41473183 None:intergenic 50.0%
!!! GCTTTTGCCAGGGGTACTTT+TGG + Chr2:41474488-41474507 MsG0280008912.01.T01:intron 50.0%
AACAAACGCACGGACCTTGG+GGG - Chr2:41472044-41472063 None:intergenic 55.0%
AGATGAGCCGAGGCCAATCA+AGG - Chr2:41472552-41472571 None:intergenic 55.0%
AGCAGAAGAGGCCGACGATT+TGG - Chr2:41476038-41476057 None:intergenic 55.0%
AGTGAAGTCCTCTTCGGACG+AGG - Chr2:41472462-41472481 None:intergenic 55.0%
ATCGGCGCATCGCAGATTGA+AGG - Chr2:41474973-41474992 None:intergenic 55.0%
CAGAAGCAACAGACTCACCG+AGG - Chr2:41472601-41472620 None:intergenic 55.0%
CCTGGTGTGAGCACATTAGG+CGG - Chr2:41472896-41472915 None:intergenic 55.0%
CGATGTACCCCTATCTGGGT+GGG - Chr2:41474306-41474325 None:intergenic 55.0%
CGCCTACCACCATAGGTTTG+AGG + Chr2:41475011-41475030 MsG0280008912.01.T01:intron 55.0%
CTCCGAATTACACCTGCTGC+TGG + Chr2:41472506-41472525 MsG0280008912.01.T01:CDS 55.0%
GAACCTATTGAGCCGCACAG+TGG - Chr2:41474913-41474932 None:intergenic 55.0%
GACCTTGGGGGTTTCAGTGT+TGG - Chr2:41472032-41472051 None:intergenic 55.0%
GATGTACCCCTATCTGGGTG+GGG - Chr2:41474305-41474324 None:intergenic 55.0%
GCCAATCAAGGCGAGTCTCT+TGG - Chr2:41472540-41472559 None:intergenic 55.0%
GCCCTCAAACCTATGGTGGT+AGG - Chr2:41475016-41475035 None:intergenic 55.0%
GGCAGAGAGTCCTTGAGAAG+TGG - Chr2:41472669-41472688 None:intergenic 55.0%
GGCATAATGAGGTTGCGGAC+AGG - Chr2:41471977-41471996 None:intergenic 55.0%
GGCTTCGATGTACCCCTATC+TGG - Chr2:41474311-41474330 None:intergenic 55.0%
GGTGTCCGAGGTTTGAACCT+CGG + Chr2:41472125-41472144 MsG0280008912.01.T01:intron 55.0%
GTTGTCAACCCCACCCAGAT+AGG + Chr2:41474294-41474313 MsG0280008912.01.T01:intron 55.0%
TAGAGGAAGCAGATGAGCCG+AGG - Chr2:41472562-41472581 None:intergenic 55.0%
TATTGAGCCGCACAGTGGGA+GGG - Chr2:41474908-41474927 None:intergenic 55.0%
TCACCTGCTTTGTGAGCCTC+AGG + Chr2:41475313-41475332 MsG0280008912.01.T01:intron 55.0%
TCGATGTACCCCTATCTGGG+TGG - Chr2:41474307-41474326 None:intergenic 55.0%
TCGTCCGAAGAGGACTTCAC+TGG + Chr2:41472461-41472480 MsG0280008912.01.T01:CDS 55.0%
TGTCAACCCCACCCAGATAG+GGG + Chr2:41474296-41474315 MsG0280008912.01.T01:intron 55.0%
TTGGATCCAAGTCCAGCAGC+AGG - Chr2:41472521-41472540 None:intergenic 55.0%
! CTTGGGGGTTTCAGTGTTGG+CGG - Chr2:41472029-41472048 None:intergenic 55.0%
! GCCGCTGGTTATAGAGAGCT+GGG + Chr2:41473562-41473581 MsG0280008912.01.T01:intron 55.0%
!! AGACTCGCCTTGATTGGCCT+CGG + Chr2:41472542-41472561 MsG0280008912.01.T01:CDS 55.0%
!! TTGGGGGTTTCAGTGTTGGC+GGG - Chr2:41472028-41472047 None:intergenic 55.0%
AATCGCCACTGGGACTGTCG+TGG + Chr2:41472706-41472725 MsG0280008912.01.T01:CDS 60.0%
AGGTGAAGCCTCGTCCGAAG+AGG + Chr2:41472451-41472470 MsG0280008912.01.T01:CDS 60.0%
ATCGCCACTGGGACTGTCGT+GGG + Chr2:41472707-41472726 MsG0280008912.01.T01:CDS 60.0%
CCGCCTAATGTGCTCACACC+AGG + Chr2:41472893-41472912 MsG0280008912.01.T01:CDS 60.0%
CGCCAACACTGAAACCCCCA+AGG + Chr2:41472027-41472046 MsG0280008912.01.T01:CDS 60.0%
CTATTGAGCCGCACAGTGGG+AGG - Chr2:41474909-41474928 None:intergenic 60.0%
CTCCCACTGTGCGGCTCAAT+AGG + Chr2:41474907-41474926 MsG0280008912.01.T01:intron 60.0%
GAGCCTGAGGCTCACAAAGC+AGG - Chr2:41475319-41475338 None:intergenic 60.0%
GGCTGCAGCAACAGCCAGAT+AGG - Chr2:41473827-41473846 None:intergenic 60.0%
GGTTGCGGACAGGTACTTCG+CGG - Chr2:41471967-41471986 None:intergenic 60.0%
GTTGCGGACAGGTACTTCGC+GGG - Chr2:41471966-41471985 None:intergenic 60.0%
TGTTCCCACGACAGTCCCAG+TGG - Chr2:41472714-41472733 None:intergenic 60.0%
TTAGGGTCCCTCCCACTGTG+CGG + Chr2:41474898-41474917 MsG0280008912.01.T01:intron 60.0%
! GGCCGCTGGTTATAGAGAGC+TGG + Chr2:41473561-41473580 MsG0280008912.01.T01:intron 60.0%
! GTGGAGAAGTGAGGTGTCCG+AGG + Chr2:41472113-41472132 MsG0280008912.01.T01:intron 60.0%
! TGGCGCGAGGAGGCATAATG+AGG - Chr2:41471988-41472007 None:intergenic 60.0%
!! TGGGGGTTTCAGTGTTGGCG+GGG - Chr2:41472027-41472046 None:intergenic 60.0%
ATGCCTCCTCGCGCCACTCT+CGG + Chr2:41471992-41472011 MsG0280008912.01.T01:CDS 65.0%
CGGGGCCGAGGTTCAAACCT+CGG - Chr2:41472133-41472152 None:intergenic 65.0%
GCATGGTATATGCGGGGCCG+AGG - Chr2:41472145-41472164 None:intergenic 65.0%
GGGGTGAGTGAAGCCGAGAG+TGG - Chr2:41472008-41472027 None:intergenic 65.0%
GTAAGGAGAAGGAGGGCCGC+TGG + Chr2:41473547-41473566 MsG0280008912.01.T01:intron 65.0%
AAGCCGAGAGTGGCGCGAGG+AGG - Chr2:41471998-41472017 None:intergenic 70.0%
GTGAAGCCGAGAGTGGCGCG+AGG - Chr2:41472001-41472020 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 41471728 41476417 41471728 ID=MsG0280008912.01;Name=MsG0280008912.01
Chr2 mRNA 41471728 41476417 41471728 ID=MsG0280008912.01.T01;Parent=MsG0280008912.01;Name=MsG0280008912.01.T01;_AED=0.45;_eAED=0.47;_QI=96|0.75|0.8|1|1|1|5|0|418
Chr2 exon 41476361 41476417 41476361 ID=MsG0280008912.01.T01:exon:29833;Parent=MsG0280008912.01.T01
Chr2 exon 41475644 41475770 41475644 ID=MsG0280008912.01.T01:exon:29832;Parent=MsG0280008912.01.T01
Chr2 exon 41473722 41473947 41473722 ID=MsG0280008912.01.T01:exon:29831;Parent=MsG0280008912.01.T01
Chr2 exon 41472293 41472914 41472293 ID=MsG0280008912.01.T01:exon:29830;Parent=MsG0280008912.01.T01
Chr2 exon 41471728 41472048 41471728 ID=MsG0280008912.01.T01:exon:29829;Parent=MsG0280008912.01.T01
Chr2 five_prime_UTR 41471728 41471823 41471728 ID=MsG0280008912.01.T01:five_prime_utr;Parent=MsG0280008912.01.T01
Chr2 CDS 41471824 41472048 41471824 ID=MsG0280008912.01.T01:cds;Parent=MsG0280008912.01.T01
Chr2 CDS 41472293 41472914 41472293 ID=MsG0280008912.01.T01:cds;Parent=MsG0280008912.01.T01
Chr2 CDS 41473722 41473947 41473722 ID=MsG0280008912.01.T01:cds;Parent=MsG0280008912.01.T01
Chr2 CDS 41475644 41475770 41475644 ID=MsG0280008912.01.T01:cds;Parent=MsG0280008912.01.T01
Chr2 CDS 41476361 41476417 41476361 ID=MsG0280008912.01.T01:cds;Parent=MsG0280008912.01.T01
Gene Sequence

>MsG0280008912.01.T01

ATGTCAGGTGCAGCCTCCTCATCTACTATTCTCACTACTTCACTTGTATTTTCTTCCTCATTCTCCTCTTCTCGTCTCTTCATCAGAAGTAGACTCGGTCTAAGGTCAGCTTCATCACCGCTACGCCATCTTTGTTTGACCCGCGAAGTACCTGTCCGCAACCTCATTATGCCTCCTCGCGCCACTCTCGGCTTCACTCACCCCGCCAACACTGAAACCCCCAAGATATCATTTGCAGCGAAGGATACTGATACTGATGTGGCGGAATGGAAAGGGGACCTATTAGCAGTTGCTGTGACGGAAAAAGATGTTACTAGAGACGAAGAGTTGAAATTCCAGAATCAGATATTGAGAACACTAGACTCTAAATTAGGCGGTTTATTAGGTGAAGCCTCGTCCGAAGAGGACTTCACTGGAAAACTCGGACAATCAACGCTTCTCCGAATTACACCTGCTGCTGGACTTGGATCCAAGAGACTCGCCTTGATTGGCCTCGGCTCATCTGCTTCCTCTACTGCCGCATTTAAAACCCTCGGTGAGTCTGTTGCTTCTGCAGCTAACTTCGCTCAGGCTGCCGATGTTGCTGTCGTTGTTCTACCCACTTCTCAAGGACTCTCTGCCCCTAACATTGCTTCTGCAATCGCCACTGGGACTGTCGTGGGAACATTTGAGGATAATAGATTCAAGTCTGAGTCCAAGAAGAAACCGGCCCTTAAATCACTTGATATTATTGGTCTTGGAACAGGGCCTGAATTCGAGAAGAAACTTAAGTATGCAGGAGATGTATCTTCTGGAATCATTCTTGGACGGGAGCTTGTAAATTCTCCGCCTAATGTGCTCACACCAGGAGTATTGGCAGAAGAAGCATCTAAGATAGCTTCAACATATAGTGATGTTTTCACTGCCAAAGTATTGGATGCTGAGCAGTGTAAGGAATTGAATATGGGATCCTATCTGGCTGTTGCTGCAGCCTCAGCAAATCCTCCTCAGTTTATTCATCTGTGTTATAAACCACCAACTGGACCTGTCAATGTCAAGTTGGCATTAGTCGGAAAAGGTTTGACTTTTGACAGTGGTGGCTACAATATAAAGACAGGACCTGGCTGTATGATTGAGCTCATGAAATTTGATATGGGTGGATCAGCTGCGGTTTTTGGAGCAGCAAAGGCTATTGGTCAAATCAAACCTCTTGGAGTGGAGGTATCTGGTGGTATTGATAGGGTAACTGCTGATGCAGTCAGTTATTTTAATATATAG

Protein sequence

>MsG0280008912.01.T01

MSGAASSSTILTTSLVFSSSFSSSRLFIRSRLGLRSASSPLRHLCLTREVPVRNLIMPPRATLGFTHPANTETPKISFAAKDTDTDVAEWKGDLLAVAVTEKDVTRDEELKFQNQILRTLDSKLGGLLGEASSEEDFTGKLGQSTLLRITPAAGLGSKRLALIGLGSSASSTAAFKTLGESVASAANFAQAADVAVVVLPTSQGLSAPNIASAIATGTVVGTFEDNRFKSESKKKPALKSLDIIGLGTGPEFEKKLKYAGDVSSGIILGRELVNSPPNVLTPGVLAEEASKIASTYSDVFTAKVLDAEQCKELNMGSYLAVAAASANPPQFIHLCYKPPTGPVNVKLALVGKGLTFDSGGYNIKTGPGCMIELMKFDMGGSAAVFGAAKAIGQIKPLGVEVSGGIDRVTADAVSYFNI*