AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023222.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023222.01.T01 MTR_8g089650 97.909 287 5 1 1 286 151 437 0.0 588
MsG0480023222.01.T01 MTR_8g089655 97.260 146 4 0 287 432 1 146 8.30e-98 289
MsG0480023222.01.T01 MTR_4g104410 55.319 282 110 7 2 277 92 363 5.28e-97 295
MsG0480023222.01.T01 MTR_5g035980 50.625 320 111 8 1 279 132 445 2.56e-96 296
MsG0480023222.01.T01 MTR_8g089655 97.902 143 3 0 290 432 1 143 3.93e-96 285
MsG0480023222.01.T01 MTR_4g106480 52.083 288 122 6 2 279 117 398 8.98e-94 288
MsG0480023222.01.T01 MTR_3g078380 51.186 295 120 8 2 279 124 411 1.62e-93 288
MsG0480023222.01.T01 MTR_1g021590 43.878 294 151 7 2 290 160 444 2.11e-75 243
MsG0480023222.01.T01 MTR_5g018520 42.857 280 148 5 2 277 148 419 7.71e-72 233
MsG0480023222.01.T01 MTR_2g060070 43.273 275 143 5 2 275 117 379 2.44e-71 231
MsG0480023222.01.T01 MTR_4g068457 38.235 306 176 5 2 301 179 477 6.05e-67 222
MsG0480023222.01.T01 MTR_4g068457 23.673 245 137 9 64 276 131 357 1.85e-11 66.2
MsG0480023222.01.T01 MTR_2g101410 35.517 290 157 7 2 279 138 409 2.29e-52 182
MsG0480023222.01.T01 MTR_2g101410 27.004 237 130 11 64 275 87 305 3.28e-12 68.6
MsG0480023222.01.T01 MTR_3g110185 38.596 285 156 8 1 279 140 411 1.10e-49 181
MsG0480023222.01.T01 MTR_3g110185 26.971 241 137 8 60 276 87 312 1.47e-13 73.2
MsG0480023222.01.T01 MTR_6g465150 26.316 228 117 6 81 275 129 338 2.57e-13 71.6
MsG0480023222.01.T01 MTR_8g028700 27.354 223 126 9 60 275 230 423 6.99e-13 70.9
MsG0480023222.01.T01 MTR_2g102267 25.260 289 163 11 11 282 41 293 8.54e-13 69.3
MsG0480023222.01.T01 MTR_1g072140 27.660 235 141 9 51 280 18 228 2.08e-12 68.2
MsG0480023222.01.T01 MTR_1g072140 27.149 221 125 9 95 311 21 209 5.76e-12 67.0
MsG0480023222.01.T01 MTR_3g088545 23.350 197 96 3 71 218 97 287 3.52e-12 67.8
MsG0480023222.01.T01 MTR_4g105700 27.074 229 134 10 73 280 419 635 6.97e-12 68.2
MsG0480023222.01.T01 MTR_4g123597 30.201 149 93 4 80 225 561 701 1.39e-11 67.0
MsG0480023222.01.T01 MTR_4g069090 31.707 164 89 6 60 218 109 254 2.71e-11 66.2
MsG0480023222.01.T01 MTR_3g106080 32.414 145 87 5 76 217 478 614 4.31e-11 65.5
MsG0480023222.01.T01 MTR_4g119620 26.786 224 128 9 70 280 37 237 4.86e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023222.01.T01 AT1G24530 71.942 278 68 2 2 279 138 405 7.86e-142 412
MsG0480023222.01.T01 AT1G24130 51.724 290 121 7 2 279 130 412 1.49e-92 286
MsG0480023222.01.T01 AT5G50120 48.288 292 127 9 2 277 101 384 7.59e-85 265
MsG0480023222.01.T01 AT2G26490 43.617 282 145 7 2 278 147 419 1.05e-72 236
MsG0480023222.01.T01 AT1G49450 44.406 286 146 5 2 278 186 467 7.95e-72 234
MsG0480023222.01.T01 AT1G49450 28.163 245 125 8 64 276 137 362 6.74e-17 83.2
MsG0480023222.01.T01 AT3G51930 42.034 295 134 8 2 275 114 392 1.31e-69 226
MsG0480023222.01.T01 AT3G50390 41.754 285 150 6 2 278 149 425 6.35e-69 226
MsG0480023222.01.T01 AT3G18950 40.925 281 157 4 2 278 190 465 1.96e-68 225
MsG0480023222.01.T01 AT3G18950 27.347 245 127 7 64 276 141 366 7.38e-16 79.7
MsG0480023222.01.T01 AT4G34380 38.947 285 163 5 2 278 176 457 3.16e-61 207
MsG0480023222.01.T01 AT1G47610 40.989 283 150 9 2 277 76 348 8.20e-60 199
MsG0480023222.01.T01 AT1G16790 54.464 112 48 2 314 423 24 134 4.76e-36 130
MsG0480023222.01.T01 AT1G21651 32.317 164 99 5 60 217 523 680 1.05e-15 80.1
MsG0480023222.01.T01 AT1G21650 32.317 164 99 5 60 217 523 680 1.30e-15 80.1
MsG0480023222.01.T01 AT4G02730 27.679 224 127 10 92 311 34 226 1.65e-13 71.6
MsG0480023222.01.T01 AT1G49040 28.440 218 130 7 60 276 898 1090 1.73e-13 73.2
MsG0480023222.01.T01 AT3G49660 26.316 209 125 7 73 275 127 312 2.45e-12 68.2
MsG0480023222.01.T01 AT3G21540 30.872 149 92 5 80 225 561 701 3.55e-12 68.9
MsG0480023222.01.T01 AT5G16750 26.244 221 127 10 71 278 416 613 4.93e-12 68.6
MsG0480023222.01.T01 AT5G16750 28.676 136 92 2 55 185 96 231 1.63e-11 67.0
MsG0480023222.01.T01 AT5G25150 33.103 145 86 5 76 217 477 613 5.02e-12 68.6
MsG0480023222.01.T01 AT5G25150 33.103 145 86 5 76 217 477 613 5.45e-12 68.2
MsG0480023222.01.T01 AT2G43770 31.351 185 92 9 139 294 46 224 4.51e-11 64.3

Find 113 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCAATTGGGGTTGTTTC+TGG 0.129140 4:+82322469 MsG0480023222.01.T01:CDS
GTTTCTGGTGCTGCTCTTAA+TGG 0.173203 4:+82322484 MsG0480023222.01.T01:CDS
TGTTCATTAAATTAAACTAT+AGG 0.268819 4:-82322615 None:intergenic
CTAACGACTTAACCGGTTTC+CGG 0.279074 4:-82319367 None:intergenic
TTCATCTGGTAAAGGTAAAA+AGG 0.279247 4:+82322345 MsG0480023222.01.T01:CDS
ACACTGAACCGTCCTCGTTT+AGG 0.293115 4:-82319124 None:intergenic
CTGATCGGACGGTTAGGATT+TGG 0.299611 4:+82319294 MsG0480023222.01.T01:CDS
GGGACAAAACACTCAAAATA+TGG 0.300866 4:+82318901 MsG0480023222.01.T01:CDS
TTTCACCTATTGCTCAGATT+TGG 0.309135 4:+82322533 MsG0480023222.01.T01:CDS
TTTCTGGTGCTGCTCTTAAT+GGG 0.309649 4:+82322485 MsG0480023222.01.T01:CDS
GCGATCGTTCGATATTAGTA+TGG 0.311845 4:+82319162 MsG0480023222.01.T01:CDS
AAGGTTTGGCAACTTTCTAT+TGG 0.313481 4:+82319482 MsG0480023222.01.T01:CDS
CATCCCTTGTGATTCATAAT+AGG 0.316088 4:-82322260 None:intergenic
GATTTACAAAAGGCTTTGTT+TGG 0.326034 4:+82322316 MsG0480023222.01.T01:CDS
CACTGAACCGTCCTCGTTTA+GGG 0.326660 4:-82319123 None:intergenic
TGGGTGTGATCTGGCCTCTC+AGG 0.327971 4:+82319502 MsG0480023222.01.T01:CDS
CCGCGTCTTCATGTGCTTTG+AGG 0.338253 4:-82318953 None:intergenic
CGCGTCTTCATGTGCTTTGA+GGG 0.347304 4:-82318952 None:intergenic
GTTCATTAAATTAAACTATA+GGG 0.349162 4:-82322614 None:intergenic
TGTTTATTCAGTTGTTGAAA+TGG 0.351022 4:+82322144 MsG0480023222.01.T01:intron
AACACAGAAACGACGCCGTT+TGG 0.351900 4:-82319434 None:intergenic
CGGATAAACGAATACGCGTT+TGG 0.358390 4:+82319024 MsG0480023222.01.T01:CDS
TGGTTGTGAGTGGGGCTTTG+AGG 0.360564 4:+82319210 MsG0480023222.01.T01:CDS
ACTTTCTATTGGGTGTGATC+TGG 0.363822 4:+82319493 MsG0480023222.01.T01:CDS
AGGTTTGGCAACTTTCTATT+GGG 0.364284 4:+82319483 MsG0480023222.01.T01:CDS
TGTCAAGTATAGCAAGTCTT+TGG 0.367093 4:-82322411 None:intergenic
GCGTTATCTACTCCGTTTCA+TGG 0.381531 4:+82318880 MsG0480023222.01.T01:CDS
TAATAGGATATCAATTCCTT+TGG 0.387539 4:-82322244 None:intergenic
TCAGGTATAGAAGGTACATT+TGG 0.388079 4:-82322181 None:intergenic
GCACGTTCTAGTTGCGACTT+TGG 0.398974 4:+82319070 MsG0480023222.01.T01:CDS
GGTTGTGAGTGGGGCTTTGA+GGG 0.403858 4:+82319211 MsG0480023222.01.T01:CDS
TTGTTTGGAGTAATTTCATC+TGG 0.404252 4:+82322331 MsG0480023222.01.T01:CDS
TTGTTGAGACATTTGCAATT+GGG 0.407069 4:+82322458 MsG0480023222.01.T01:CDS
GAATTCCAAATCTGAGCAAT+AGG 0.408372 4:-82322538 None:intergenic
TTCTTTAGACGGTGAAATAA+AGG 0.410331 4:+82319463 MsG0480023222.01.T01:CDS
GGTGCTGCTCTTAATGGGAT+TGG 0.417263 4:+82322490 MsG0480023222.01.T01:CDS
TTTGTTGAGACATTTGCAAT+TGG 0.417495 4:+82322457 MsG0480023222.01.T01:CDS
GAATGAATCTTCTAGAAAGA+TGG 0.426190 4:+82322378 MsG0480023222.01.T01:CDS
GGATAAACGAATACGCGTTT+GGG 0.431453 4:+82319025 MsG0480023222.01.T01:CDS
TAGACGGTGAAATAAAGGTT+TGG 0.432760 4:+82319468 MsG0480023222.01.T01:CDS
TCATTGAGGGGTAGATTTAG+TGG 0.436309 4:-82322572 None:intergenic
ATTTGGAAGCGGGTTTATGA+TGG 0.440066 4:+82319311 MsG0480023222.01.T01:CDS
TCTCGATGGTCACCGGAAAC+CGG 0.448997 4:+82319355 MsG0480023222.01.T01:CDS
TGCTGAGTGGTTCTGCTGAT+CGG 0.460135 4:+82319279 MsG0480023222.01.T01:CDS
ATTGCCGCTAACGACTTAAC+CGG 0.460335 4:-82319374 None:intergenic
GACGGTTAGGATTTGGAAGC+GGG 0.467016 4:+82319301 MsG0480023222.01.T01:CDS
GTTCTGCTGATCGGACGGTT+AGG 0.471712 4:+82319288 MsG0480023222.01.T01:CDS
GGAGTAATTTCATCTGGTAA+AGG 0.473380 4:+82322337 MsG0480023222.01.T01:CDS
GGTGATAGAGGATTTACAAA+AGG 0.474496 4:+82322306 MsG0480023222.01.T01:CDS
ATGAAGCTTGATACTAAGCC+TGG 0.476553 4:+82322433 MsG0480023222.01.T01:CDS
GGCGTCGTTTCTGTGTTTAG+TGG 0.477810 4:+82319440 MsG0480023222.01.T01:CDS
GTGTTTAGTGGTTCTTTAGA+CGG 0.480377 4:+82319452 MsG0480023222.01.T01:CDS
GTCGCCACGTAAAACGTCTC+TGG 0.481507 4:+82318814 MsG0480023222.01.T01:CDS
TATAGAAGGTACATTTGGCT+TGG 0.481909 4:-82322176 None:intergenic
GGAGGAGGAAACGGCGGAGA+CGG 0.486240 4:-82318770 None:intergenic
GGGTGTGATCTGGCCTCTCA+GGG 0.499450 4:+82319503 MsG0480023222.01.T01:CDS
AGAGGATAGTGCGAATCATA+TGG 0.503924 4:+82319190 MsG0480023222.01.T01:CDS
TGTGGTGGTGGTTCCAGACA+CGG 0.508169 4:-82318698 None:intergenic
ATGAATCACAAATGTAATTG+AGG 0.508325 4:-82322662 None:intergenic
ACGGACCTTGCCGTCTCCAA+CGG 0.513299 4:+82318858 MsG0480023222.01.T01:CDS
CGTTATCTACTCCGTTTCAT+GGG 0.513874 4:+82318881 MsG0480023222.01.T01:CDS
TGTTGAGACATTTGCAATTG+GGG 0.514795 4:+82322459 MsG0480023222.01.T01:CDS
TTGTGAGTGGGGCTTTGAGG+GGG 0.519148 4:+82319213 MsG0480023222.01.T01:CDS
GCAAATGTCTCAACAAATCC+AGG 0.521051 4:-82322451 None:intergenic
AGCCTCATTGAAGGTGATAG+AGG 0.521712 4:+82322294 MsG0480023222.01.T01:CDS
AAGACTGTAAAATCCGTGTC+TGG 0.524903 4:+82318685 MsG0480023222.01.T01:CDS
AGGGGTAGATTTAGTGGCTG+AGG 0.534389 4:-82322566 None:intergenic
TGTTGTGTTGGTGTTCTCGA+TGG 0.537133 4:+82319341 MsG0480023222.01.T01:CDS
GGACGGTTAGGATTTGGAAG+CGG 0.537738 4:+82319300 MsG0480023222.01.T01:CDS
TTTGGAAGCGGGTTTATGAT+GGG 0.537861 4:+82319312 MsG0480023222.01.T01:CDS
CTATTATGAATCACAAGGGA+TGG 0.538033 4:+82322261 MsG0480023222.01.T01:CDS
ACGGCGGAGACGGTCGTTGA+CGG 0.541326 4:-82318760 None:intergenic
TTCACAAGAAGCCTCATTGA+AGG 0.547428 4:+82322285 MsG0480023222.01.T01:CDS
TGAACATGCCGACGCTGTCA+CGG 0.551139 4:+82318839 MsG0480023222.01.T01:CDS
ATCCGATGATCCTGTGTAGA+CGG 0.555899 4:-82319006 None:intergenic
GTTGTGAGTGGGGCTTTGAG+GGG 0.558441 4:+82319212 MsG0480023222.01.T01:CDS
GTAGATAACGCCGTTGGAGA+CGG 0.567014 4:-82318868 None:intergenic
GATATCAATTCCTTTGGCGA+AGG 0.568099 4:-82322238 None:intergenic
GCGAATCATATGGTTGTGAG+TGG 0.573158 4:+82319200 MsG0480023222.01.T01:CDS
GTCGTTGACGGTGGGAAGAG+TGG 0.575255 4:-82318748 None:intergenic
CGCGTTTGGGCGAAACCCGT+CGG 0.575820 4:+82319038 MsG0480023222.01.T01:CDS
CGATCGTTCGATATTAGTAT+GGG 0.577039 4:+82319163 MsG0480023222.01.T01:CDS
AACCGTCTACACAGGATCAT+CGG 0.578209 4:+82319004 MsG0480023222.01.T01:CDS
GAAAGTCAAAGTTCTCCAAA+CGG 0.579574 4:+82319419 MsG0480023222.01.T01:CDS
GAGTGGTTCTGCTGATCGGA+CGG 0.588641 4:+82319283 MsG0480023222.01.T01:CDS
AAAGAAGATTCCTTCGCCAA+AGG 0.596578 4:+82322228 MsG0480023222.01.T01:CDS
GTCTCTGATTTGTTGCTGAG+TGG 0.599006 4:+82319266 MsG0480023222.01.T01:CDS
TTGGTGTTCTCGATGGTCAC+CGG 0.602395 4:+82319348 MsG0480023222.01.T01:CDS
GCGGAGACGGTCGTTGACGG+TGG 0.612720 4:-82318757 None:intergenic
CGGAGACGGTCGTTGACGGT+GGG 0.614987 4:-82318756 None:intergenic
GGCAAGGTCCGTGACAGCGT+CGG 0.616914 4:-82318847 None:intergenic
AACGATGGAACCGTCTACAC+AGG 0.620199 4:+82318996 MsG0480023222.01.T01:CDS
AACGGAGTAGATAACGCCGT+TGG 0.621817 4:-82318874 None:intergenic
TAACGCCGTTGGAGACGGCA+AGG 0.624466 4:-82318863 None:intergenic
ATATCCTATTATGAATCACA+AGG 0.626592 4:+82322256 MsG0480023222.01.T01:CDS
CAGAAAATATTGACCCTGAG+AGG 0.634509 4:-82319516 None:intergenic
GAATCATATGGTTGTGAGTG+GGG 0.638813 4:+82319202 MsG0480023222.01.T01:CDS
GCGGTTGCAGTTTCTAACGA+TGG 0.639355 4:+82318981 MsG0480023222.01.T01:CDS
GCTTTAGCCCTAAACGAGGA+CGG 0.641974 4:+82319116 MsG0480023222.01.T01:CDS
CGAATCATATGGTTGTGAGT+GGG 0.642385 4:+82319201 MsG0480023222.01.T01:CDS
GAAGAGTGGTTAACTTGCGG+TGG 0.646427 4:-82318734 None:intergenic
GATATTAGTATGGGAACGAG+AGG 0.652105 4:+82319172 MsG0480023222.01.T01:CDS
AATTCAAGAGTATAATGATG+AGG 0.660610 4:+82319394 MsG0480023222.01.T01:CDS
ATCCTCTATCACCTTCAATG+AGG 0.662478 4:-82322296 None:intergenic
GAAACCGGTTAAGTCGTTAG+CGG 0.662961 4:+82319370 MsG0480023222.01.T01:CDS
TGGGAAGAGTGGTTAACTTG+CGG 0.663058 4:-82318737 None:intergenic
CCTCAAAGCACATGAAGACG+CGG 0.680860 4:+82318953 MsG0480023222.01.T01:CDS
TTTGGAGAAGCATAAATCAG+CGG 0.685092 4:+82319088 MsG0480023222.01.T01:CDS
GCAATAGGTGAAAGAATGTG+AGG 0.686454 4:-82322523 None:intergenic
TATCCTATTATGAATCACAA+GGG 0.698098 4:+82322257 MsG0480023222.01.T01:CDS
TAATGCTTTAGCCCTAAACG+AGG 0.713006 4:+82319112 MsG0480023222.01.T01:CDS
ACATGAAGACGCGGTCAACG+CGG 0.728323 4:+82318962 MsG0480023222.01.T01:CDS
TTTGTGGGAGGAGGAAACGG+CGG 0.729879 4:-82318776 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAATTATTAATAAAT+AGG - Chr4:82320532-82320551 None:intergenic 0.0%
!! AAATATATGAAATATTTGAT+AGG + Chr4:82320139-82320158 MsG0480023222.01.T01:intron 10.0%
!! TGTTATGATAAATATAAATA+GGG + Chr4:82319730-82319749 MsG0480023222.01.T01:intron 10.0%
!! TTGTTATGATAAATATAAAT+AGG + Chr4:82319729-82319748 MsG0480023222.01.T01:intron 10.0%
!!! AAAAAAATTGTTTTATTACT+TGG - Chr4:82320945-82320964 None:intergenic 10.0%
!!! AGATAGTATATATTTTTTTT+AGG + Chr4:82320114-82320133 MsG0480023222.01.T01:intron 10.0%
!!! ATAGTATATATTTTTTTTAG+GGG + Chr4:82320116-82320135 MsG0480023222.01.T01:intron 10.0%
!!! ATTTATATTTTTACTATTTG+TGG + Chr4:82319639-82319658 MsG0480023222.01.T01:intron 10.0%
!!! GATAGTATATATTTTTTTTA+GGG + Chr4:82320115-82320134 MsG0480023222.01.T01:intron 10.0%
!! AAAAAAAATTGACATGTTTA+AGG - Chr4:82321137-82321156 None:intergenic 15.0%
!! ACCTATTTATTAAAAGTAAA+AGG - Chr4:82321101-82321120 None:intergenic 15.0%
!! ATAAATTGTCGATATTTATA+TGG - Chr4:82320089-82320108 None:intergenic 15.0%
!! CTGAATAAACAAATAAATAT+TGG - Chr4:82322135-82322154 None:intergenic 15.0%
!! GTTCATTAAATTAAACTATA+GGG - Chr4:82322617-82322636 None:intergenic 15.0%
!! TAAATTGTCGATATTTATAT+GGG - Chr4:82320088-82320107 None:intergenic 15.0%
!! TATTAAAAGTAAAAGGTTTA+GGG - Chr4:82321094-82321113 None:intergenic 15.0%
!! TGTTCATTAAATTAAACTAT+AGG - Chr4:82322618-82322637 None:intergenic 15.0%
!! TTATTAAAAGTAAAAGGTTT+AGG - Chr4:82321095-82321114 None:intergenic 15.0%
!!! AATTTGAAGTTTTTTAGTTT+TGG - Chr4:82319985-82320004 None:intergenic 15.0%
!!! ACCTTTTACTTTTAATAAAT+AGG + Chr4:82321097-82321116 MsG0480023222.01.T01:intron 15.0%
!!! AGTTAGTGTTTTTTTTTTTT+TGG + Chr4:82320882-82320901 MsG0480023222.01.T01:intron 15.0%
!!! ATTGATACTTTACATTATTT+TGG - Chr4:82320406-82320425 None:intergenic 15.0%
!!! ATTGGAATTTATGTTTTTTT+TGG - Chr4:82321281-82321300 None:intergenic 15.0%
!!! TTCTAAAAGTACTAAAATTT+TGG + Chr4:82321394-82321413 MsG0480023222.01.T01:intron 15.0%
!! AATAAAAACAACATTAGACT+GGG - Chr4:82321631-82321650 None:intergenic 20.0%
!! AATCCAAAAAAAATTACATG+GGG - Chr4:82319770-82319789 None:intergenic 20.0%
!! ACATTTATGTAGAGAAAAAT+TGG - Chr4:82321299-82321318 None:intergenic 20.0%
!! CATATATCAGTAGATTTATT+GGG + Chr4:82321007-82321026 MsG0480023222.01.T01:intron 20.0%
!! CTAAAAAACTTCAAATTACA+AGG + Chr4:82319988-82320007 MsG0480023222.01.T01:intron 20.0%
!! GAAAAAATCTTCAAATTACA+AGG - Chr4:82319797-82319816 None:intergenic 20.0%
!! GAATCCAAAAAAAATTACAT+GGG - Chr4:82319771-82319790 None:intergenic 20.0%
!! TAATTAAATAAGTCAGACAT+TGG - Chr4:82321054-82321073 None:intergenic 20.0%
!! TTGTTTAATATCAGCATATA+TGG - Chr4:82320610-82320629 None:intergenic 20.0%
!!! ATATTTTTACTATTTGTGGT+AGG + Chr4:82319643-82319662 MsG0480023222.01.T01:intron 20.0%
!!! CCAAAAAGAAAATTTTACAA+GGG + Chr4:82320018-82320037 MsG0480023222.01.T01:intron 20.0%
!!! CTAATATCCAATTCAATTTT+TGG + Chr4:82319675-82319694 MsG0480023222.01.T01:intron 20.0%
!!! TATTTTTACTATTTGTGGTA+GGG + Chr4:82319644-82319663 MsG0480023222.01.T01:intron 20.0%
!!! TCCAAAAAGAAAATTTTACA+AGG + Chr4:82320017-82320036 MsG0480023222.01.T01:intron 20.0%
!!! TTTGAAGTGTTATATCAATA+TGG - Chr4:82320651-82320670 None:intergenic 20.0%
!!! TTTTGGTTTAATTTATGCTT+CGG - Chr4:82321963-82321982 None:intergenic 20.0%
!!! TTTTGTTTCATTTTGATTTC+AGG - Chr4:82322202-82322221 None:intergenic 20.0%
! AAAAATGAAATGTCATTGAG+GGG - Chr4:82322587-82322606 None:intergenic 25.0%
! AAAACTTCAAATTACAAGGA+TGG + Chr4:82319992-82320011 MsG0480023222.01.T01:intron 25.0%
! AAATCTTCAAATTACAAGGA+CGG - Chr4:82319793-82319812 None:intergenic 25.0%
! AAATTTCCTCAAATTACAAG+GGG - Chr4:82319847-82319866 None:intergenic 25.0%
! AATAGGTTAAATTACACAAG+TGG - Chr4:82320515-82320534 None:intergenic 25.0%
! ACAAAAATGAAATGTCATTG+AGG - Chr4:82322589-82322608 None:intergenic 25.0%
! AGGTAAATGTATAATTTCAG+AGG + Chr4:82321355-82321374 MsG0480023222.01.T01:intron 25.0%
! ATATCCTATTATGAATCACA+AGG + Chr4:82322256-82322275 MsG0480023222.01.T01:CDS 25.0%
! ATGAATCACAAATGTAATTG+AGG - Chr4:82322665-82322684 None:intergenic 25.0%
! ATTACAAACCTCAAACATAA+AGG - Chr4:82320182-82320201 None:intergenic 25.0%
! CAAAAACTAATTCAAAGTAG+AGG - Chr4:82322072-82322091 None:intergenic 25.0%
! CAAAAATGAAATGTCATTGA+GGG - Chr4:82322588-82322607 None:intergenic 25.0%
! CCTGTAATATAGATTATTTC+CGG - Chr4:82320048-82320067 None:intergenic 25.0%
! CGATAATCCATCTAAAAAAA+TGG - Chr4:82320793-82320812 None:intergenic 25.0%
! CGGAAATAATCTATATTACA+GGG + Chr4:82320046-82320065 MsG0480023222.01.T01:intron 25.0%
! CTTGTAATTTGAGGAAATTT+CGG + Chr4:82319847-82319866 MsG0480023222.01.T01:intron 25.0%
! GAAATAATCTATATTACAGG+GGG + Chr4:82320048-82320067 MsG0480023222.01.T01:intron 25.0%
! GAAATTTCCTCAAATTACAA+GGG - Chr4:82319848-82319867 None:intergenic 25.0%
! GAATAAAAACAACATTAGAC+TGG - Chr4:82321632-82321651 None:intergenic 25.0%
! GATACAAACCTCAAAATTAA+AGG + Chr4:82320488-82320507 MsG0480023222.01.T01:intron 25.0%
! GCATATATCAGTAGATTTAT+TGG + Chr4:82321006-82321025 MsG0480023222.01.T01:intron 25.0%
! GGAAATAATCTATATTACAG+GGG + Chr4:82320047-82320066 MsG0480023222.01.T01:intron 25.0%
! GGAATCCAAAAAAAATTACA+TGG - Chr4:82319772-82319791 None:intergenic 25.0%
! TAATAGGATATCAATTCCTT+TGG - Chr4:82322247-82322266 None:intergenic 25.0%
! TATCCTATTATGAATCACAA+GGG + Chr4:82322257-82322276 MsG0480023222.01.T01:CDS 25.0%
! TGTACAGTCAAAATTCATAA+AGG + Chr4:82319958-82319977 MsG0480023222.01.T01:intron 25.0%
! TGTTTATTCAGTTGTTGAAA+TGG + Chr4:82322144-82322163 MsG0480023222.01.T01:intron 25.0%
! TTACAAACCTCAAACATAAA+GGG - Chr4:82320181-82320200 None:intergenic 25.0%
! TTATTACAGCATTCTATTCT+AGG - Chr4:82319546-82319565 None:intergenic 25.0%
! TTGAAGTTCCTAAATTACTA+GGG - Chr4:82321324-82321343 None:intergenic 25.0%
! TTGTATCAGATTGATCATTT+AGG - Chr4:82320475-82320494 None:intergenic 25.0%
! TTGTTGGTACACAAAAAAAA+AGG + Chr4:82321230-82321249 MsG0480023222.01.T01:intron 25.0%
! TTTAGGAACTTCAAAAAACT+TGG + Chr4:82321330-82321349 MsG0480023222.01.T01:intron 25.0%
!! AAAATTTTACAAGGGAAAAC+CGG + Chr4:82320026-82320045 MsG0480023222.01.T01:intron 25.0%
!! AAATTTGCTCAAATTAACAG+GGG - Chr4:82319908-82319927 None:intergenic 25.0%
!! AATTCAAGAGTATAATGATG+AGG + Chr4:82319394-82319413 MsG0480023222.01.T01:CDS 25.0%
!! CCCTTGTAAAATTTTCTTTT+TGG - Chr4:82320021-82320040 None:intergenic 25.0%
!! CTGTTAATTTGAGCAAATTT+CGG + Chr4:82319908-82319927 MsG0480023222.01.T01:intron 25.0%
!! GAAATTTGCTCAAATTAACA+GGG - Chr4:82319909-82319928 None:intergenic 25.0%
!! GTTTGAGGTTTGTAATATAT+TGG + Chr4:82320186-82320205 MsG0480023222.01.T01:intron 25.0%
!! TTCACATCTAAATTCTTTTG+AGG + Chr4:82320227-82320246 MsG0480023222.01.T01:intron 25.0%
!! TTTGAAGTTCCTAAATTACT+AGG - Chr4:82321325-82321344 None:intergenic 25.0%
!! TTTGGTTTAATTTATGCTTC+GGG - Chr4:82321962-82321981 None:intergenic 25.0%
!! TTTTGTGTACCAACAAATAA+AGG - Chr4:82321226-82321245 None:intergenic 25.0%
!!! ATATCCAATTCAATTTTTGG+TGG + Chr4:82319678-82319697 MsG0480023222.01.T01:intron 25.0%
!!! ATCATCATTTTTGTAACGTT+TGG + Chr4:82320333-82320352 MsG0480023222.01.T01:intron 25.0%
!!! ATTTTGATTTCAGGTATAGA+AGG - Chr4:82322193-82322212 None:intergenic 25.0%
!!! TAATAATCATCGCTTTTGAT+AGG + Chr4:82321680-82321699 MsG0480023222.01.T01:intron 25.0%
!!! TTACCCCATGTAATTTTTTT+TGG + Chr4:82319764-82319783 MsG0480023222.01.T01:intron 25.0%
AAATGTGACCCTAGTAATTT+AGG + Chr4:82321313-82321332 MsG0480023222.01.T01:intron 30.0%
AACCTCCCATTTCAAAATAA+AGG - Chr4:82321931-82321950 None:intergenic 30.0%
ACTGTACAAAATCGATGATA+TGG - Chr4:82319946-82319965 None:intergenic 30.0%
AGCGTATATCAATATCAACA+CGG + Chr4:82321750-82321769 MsG0480023222.01.T01:intron 30.0%
CCGGAAATAATCTATATTAC+AGG + Chr4:82320045-82320064 MsG0480023222.01.T01:intron 30.0%
CGAAATTTCCTCAAATTACA+AGG - Chr4:82319849-82319868 None:intergenic 30.0%
GATTCCACCAAAAATTGAAT+TGG - Chr4:82319685-82319704 None:intergenic 30.0%
GTTACATACCTCAAACTTAA+AGG + Chr4:82320428-82320447 MsG0480023222.01.T01:intron 30.0%
TCATTATAAAAGCAGAGCAT+AGG + Chr4:82321517-82321536 MsG0480023222.01.T01:intron 30.0%
TCCCATTTCAAAATAAAGGA+GGG - Chr4:82321927-82321946 None:intergenic 30.0%
TGATAGGCTAAATTACATCA+GGG + Chr4:82320155-82320174 MsG0480023222.01.T01:intron 30.0%
TTCATCTGGTAAAGGTAAAA+AGG + Chr4:82322345-82322364 MsG0480023222.01.T01:CDS 30.0%
TTCTTTAGACGGTGAAATAA+AGG + Chr4:82319463-82319482 MsG0480023222.01.T01:CDS 30.0%
TTGATAGGCTAAATTACATC+AGG + Chr4:82320154-82320173 MsG0480023222.01.T01:intron 30.0%
TTGTTGAGACATTTGCAATT+GGG + Chr4:82322458-82322477 MsG0480023222.01.T01:CDS 30.0%
TTTGTTGAGACATTTGCAAT+TGG + Chr4:82322457-82322476 MsG0480023222.01.T01:CDS 30.0%
! AATTTGCTCAAATTAACAGG+GGG - Chr4:82319907-82319926 None:intergenic 30.0%
! ACATAAGTCCTTTAAGTTTG+AGG - Chr4:82320439-82320458 None:intergenic 30.0%
! ATACGAAAAGAAGAAGTACA+AGG + Chr4:82319575-82319594 MsG0480023222.01.T01:intron 30.0%
! ATATTCCCACCTTTATTTGT+TGG + Chr4:82321214-82321233 MsG0480023222.01.T01:intron 30.0%
! ATCGAAATTTGCTCAAATTG+CGG - Chr4:82319881-82319900 None:intergenic 30.0%
! CGAAATTTGCTCAAATTAAC+AGG - Chr4:82319910-82319929 None:intergenic 30.0%
! GAATGAATCTTCTAGAAAGA+TGG + Chr4:82322378-82322397 MsG0480023222.01.T01:CDS 30.0%
! TTGTTTGGAGTAATTTCATC+TGG + Chr4:82322331-82322350 MsG0480023222.01.T01:CDS 30.0%
!! GAAAATTACTTTTGCCTCAA+TGG + Chr4:82320723-82320742 MsG0480023222.01.T01:intron 30.0%
!! GATTTACAAAAGGCTTTGTT+TGG + Chr4:82322316-82322335 MsG0480023222.01.T01:CDS 30.0%
!!! AACCCTCCTTTATTTTGAAA+TGG + Chr4:82321922-82321941 MsG0480023222.01.T01:intron 30.0%
!!! ACCCTCCTTTATTTTGAAAT+GGG + Chr4:82321923-82321942 MsG0480023222.01.T01:intron 30.0%
!!! ATGACAGCCATTTTTTTAGA+TGG + Chr4:82320783-82320802 MsG0480023222.01.T01:intron 30.0%
!!! ATTTTTGGTGGAATCATATG+TGG + Chr4:82319690-82319709 MsG0480023222.01.T01:intron 30.0%
AAGGTTTGGCAACTTTCTAT+TGG + Chr4:82319482-82319501 MsG0480023222.01.T01:CDS 35.0%
AAGTACAAGGAATGTGTACA+AGG + Chr4:82319588-82319607 MsG0480023222.01.T01:intron 35.0%
ACAAAATCGATGATATGGCA+GGG - Chr4:82319941-82319960 None:intergenic 35.0%
AGGTTTGGCAACTTTCTATT+GGG + Chr4:82319483-82319502 MsG0480023222.01.T01:CDS 35.0%
ATTCATTCACATGCACGAAT+AGG - Chr4:82320756-82320775 None:intergenic 35.0%
ATTCGTGCATGTGAATGAAT+TGG + Chr4:82320756-82320775 MsG0480023222.01.T01:intron 35.0%
ATTGAAATGTACCAGTAGAC+AGG - Chr4:82322036-82322055 None:intergenic 35.0%
CATACTCTCATCTTCAGTTT+AGG + Chr4:82321482-82321501 MsG0480023222.01.T01:intron 35.0%
CATCCCTTGTGATTCATAAT+AGG - Chr4:82322263-82322282 None:intergenic 35.0%
CCAAAAAAACCAGTCTCTAA+CGG + Chr4:82321977-82321996 MsG0480023222.01.T01:intron 35.0%
CGATCGTTCGATATTAGTAT+GGG + Chr4:82319163-82319182 MsG0480023222.01.T01:CDS 35.0%
CTATTATGAATCACAAGGGA+TGG + Chr4:82322261-82322280 MsG0480023222.01.T01:CDS 35.0%
CTCCCATTTCAAAATAAAGG+AGG - Chr4:82321928-82321947 None:intergenic 35.0%
CTGGTAAAGGTAAAAAGGAT+AGG + Chr4:82322350-82322369 MsG0480023222.01.T01:CDS 35.0%
GAAAGTCAAAGTTCTCCAAA+CGG + Chr4:82319419-82319438 MsG0480023222.01.T01:CDS 35.0%
GAATTCCAAATCTGAGCAAT+AGG - Chr4:82322541-82322560 None:intergenic 35.0%
GACAATAAAACAAACTGCGA+TGG - Chr4:82321834-82321853 None:intergenic 35.0%
GGAGTAATTTCATCTGGTAA+AGG + Chr4:82322337-82322356 MsG0480023222.01.T01:CDS 35.0%
GGGACAAAACACTCAAAATA+TGG + Chr4:82318901-82318920 MsG0480023222.01.T01:CDS 35.0%
GGTGATAGAGGATTTACAAA+AGG + Chr4:82322306-82322325 MsG0480023222.01.T01:CDS 35.0%
GTGTACCAACAAATAAAGGT+GGG - Chr4:82321222-82321241 None:intergenic 35.0%
GTGTTTAGTGGTTCTTTAGA+CGG + Chr4:82319452-82319471 MsG0480023222.01.T01:CDS 35.0%
TACAAAATCGATGATATGGC+AGG - Chr4:82319942-82319961 None:intergenic 35.0%
TAGACGGTGAAATAAAGGTT+TGG + Chr4:82319468-82319487 MsG0480023222.01.T01:CDS 35.0%
TGTAACGTTTGGTTAACAGA+TGG + Chr4:82320344-82320363 MsG0480023222.01.T01:intron 35.0%
TGTCAAGTATAGCAAGTCTT+TGG - Chr4:82322414-82322433 None:intergenic 35.0%
TGTGTACCAACAAATAAAGG+TGG - Chr4:82321223-82321242 None:intergenic 35.0%
TGTTGAGACATTTGCAATTG+GGG + Chr4:82322459-82322478 MsG0480023222.01.T01:CDS 35.0%
TTAATGAACCTCTTTCACCT+GGG + Chr4:82320906-82320925 MsG0480023222.01.T01:intron 35.0%
TTATGTGTGACGCAACTTAA+AGG - Chr4:82320269-82320288 None:intergenic 35.0%
TTTCACCTATTGCTCAGATT+TGG + Chr4:82322533-82322552 MsG0480023222.01.T01:CDS 35.0%
! AAACTGAAGATGAGAGTATG+TGG - Chr4:82321482-82321501 None:intergenic 35.0%
! AACTGAAGATGAGAGTATGT+GGG - Chr4:82321481-82321500 None:intergenic 35.0%
! GAACTTCAAAAAACTTGGTG+AGG + Chr4:82321335-82321354 MsG0480023222.01.T01:intron 35.0%
! GAATTGTTGTTGCTTCACAA+TGG + Chr4:82321897-82321916 MsG0480023222.01.T01:intron 35.0%
! TATAGAAGGTACATTTGGCT+TGG - Chr4:82322179-82322198 None:intergenic 35.0%
! TCAGGTATAGAAGGTACATT+TGG - Chr4:82322184-82322203 None:intergenic 35.0%
! TCGAAATTTGCTCAAATTGC+GGG - Chr4:82319880-82319899 None:intergenic 35.0%
! TTTGGAGAAGCATAAATCAG+CGG + Chr4:82319088-82319107 MsG0480023222.01.T01:CDS 35.0%
!! CAAGTGGTCCTTTAATTTTG+AGG - Chr4:82320499-82320518 None:intergenic 35.0%
!! GTGGGCTTTGAAAAAGTAAA+GGG - Chr4:82321463-82321482 None:intergenic 35.0%
!! TGGGCTTTGAAAAAGTAAAG+GGG - Chr4:82321462-82321481 None:intergenic 35.0%
!! TGGTTAACAGATGGACTAAA+TGG + Chr4:82320353-82320372 MsG0480023222.01.T01:intron 35.0%
!! TGTGGGCTTTGAAAAAGTAA+AGG - Chr4:82321464-82321483 None:intergenic 35.0%
!!! CTCCTTTATTTTGAAATGGG+AGG + Chr4:82321926-82321945 MsG0480023222.01.T01:intron 35.0%
!!! GGATGGTTATGTAGTTTTGT+GGG - Chr4:82318794-82318813 None:intergenic 35.0%
AAAGAAGATTCCTTCGCCAA+AGG + Chr4:82322228-82322247 MsG0480023222.01.T01:CDS 40.0%
AAGACTGTAAAATCCGTGTC+TGG + Chr4:82318685-82318704 MsG0480023222.01.T01:CDS 40.0%
AAGGTGGGAATATGTCTGAT+CGG - Chr4:82321207-82321226 None:intergenic 40.0%
AATATGTCTGATCGGTCTAG+AGG - Chr4:82321199-82321218 None:intergenic 40.0%
ACTTTCTATTGGGTGTGATC+TGG + Chr4:82319493-82319512 MsG0480023222.01.T01:CDS 40.0%
AGAAGCCCAGTCGTATATAT+GGG + Chr4:82321419-82321438 MsG0480023222.01.T01:intron 40.0%
AGAGGATAGTGCGAATCATA+TGG + Chr4:82319190-82319209 MsG0480023222.01.T01:CDS 40.0%
ATATGTCTGATCGGTCTAGA+GGG - Chr4:82321198-82321217 None:intergenic 40.0%
ATCCTCTATCACCTTCAATG+AGG - Chr4:82322299-82322318 None:intergenic 40.0%
ATGAAGCTTGATACTAAGCC+TGG + Chr4:82322433-82322452 MsG0480023222.01.T01:CDS 40.0%
ATTCTGCCCCTTGTAATTTG+AGG + Chr4:82319838-82319857 MsG0480023222.01.T01:intron 40.0%
CAAAATCGATGATATGGCAG+GGG - Chr4:82319940-82319959 None:intergenic 40.0%
CAGAAAATATTGACCCTGAG+AGG - Chr4:82319519-82319538 None:intergenic 40.0%
CGAATCATATGGTTGTGAGT+GGG + Chr4:82319201-82319220 MsG0480023222.01.T01:CDS 40.0%
CGTTATCTACTCCGTTTCAT+GGG + Chr4:82318881-82318900 MsG0480023222.01.T01:CDS 40.0%
CTTAATGAACCTCTTTCACC+TGG + Chr4:82320905-82320924 MsG0480023222.01.T01:intron 40.0%
GAAAAAGTAAAGGGGAGTTG+TGG - Chr4:82321454-82321473 None:intergenic 40.0%
GAATAGGTGATACACCATTG+AGG - Chr4:82320740-82320759 None:intergenic 40.0%
GAATCATATGGTTGTGAGTG+GGG + Chr4:82319202-82319221 MsG0480023222.01.T01:CDS 40.0%
GATATCAATTCCTTTGGCGA+AGG - Chr4:82322241-82322260 None:intergenic 40.0%
GATATTAGTATGGGAACGAG+AGG + Chr4:82319172-82319191 MsG0480023222.01.T01:CDS 40.0%
GCAAATGTCTCAACAAATCC+AGG - Chr4:82322454-82322473 None:intergenic 40.0%
GCAATAGGTGAAAGAATGTG+AGG - Chr4:82322526-82322545 None:intergenic 40.0%
GCGATCGTTCGATATTAGTA+TGG + Chr4:82319162-82319181 MsG0480023222.01.T01:CDS 40.0%
GGATAAACGAATACGCGTTT+GGG + Chr4:82319025-82319044 MsG0480023222.01.T01:CDS 40.0%
GTAGATTTATTGGGCTTTGC+AGG + Chr4:82321016-82321035 MsG0480023222.01.T01:intron 40.0%
GTCAACTGAGTTAAGTTCAC+TGG - Chr4:82320568-82320587 None:intergenic 40.0%
TAATGCTTTAGCCCTAAACG+AGG + Chr4:82319112-82319131 MsG0480023222.01.T01:CDS 40.0%
TAGAAGCCCAGTCGTATATA+TGG + Chr4:82321418-82321437 MsG0480023222.01.T01:intron 40.0%
TATGCACTTCGAAGAGAAGA+GGG + Chr4:82320824-82320843 MsG0480023222.01.T01:intron 40.0%
TCATTGAGGGGTAGATTTAG+TGG - Chr4:82322575-82322594 None:intergenic 40.0%
TTCACAAGAAGCCTCATTGA+AGG + Chr4:82322285-82322304 MsG0480023222.01.T01:CDS 40.0%
TTGGTATAAAGTTCCAACCC+AGG - Chr4:82320926-82320945 None:intergenic 40.0%
! AAATTTGCTCAAATTGCGGG+AGG - Chr4:82319877-82319896 None:intergenic 40.0%
! AGACACGGATTTTACAGTCT+TGG - Chr4:82318686-82318705 None:intergenic 40.0%
! AGGGGCAGAATTTTTCATGA+AGG - Chr4:82319829-82319848 None:intergenic 40.0%
! ATTTGGAAGCGGGTTTATGA+TGG + Chr4:82319311-82319330 MsG0480023222.01.T01:CDS 40.0%
! GAGTGTTTTGTCCCATGAAA+CGG - Chr4:82318895-82318914 None:intergenic 40.0%
! GATTTTACAGTCTTGGTGAG+TGG - Chr4:82318679-82318698 None:intergenic 40.0%
! TTTGCAATTGGGGTTGTTTC+TGG + Chr4:82322469-82322488 MsG0480023222.01.T01:CDS 40.0%
! TTTGGAAGCGGGTTTATGAT+GGG + Chr4:82319312-82319331 MsG0480023222.01.T01:CDS 40.0%
!! CGGATGGTTATGTAGTTTTG+TGG - Chr4:82318795-82318814 None:intergenic 40.0%
!! TTTCTGGTGCTGCTCTTAAT+GGG + Chr4:82322485-82322504 MsG0480023222.01.T01:CDS 40.0%
!!! AACGTGCTTTTTTTCTCCGA+CGG - Chr4:82319057-82319076 None:intergenic 40.0%
!!! CAGCTTTTGATTTTGCCTTG+CGG - Chr4:82321581-82321600 None:intergenic 40.0%
!!! CCGTTAGAGACTGGTTTTTT+TGG - Chr4:82321980-82321999 None:intergenic 40.0%
!!! GACGGTTCAGTGTTATTTTC+AGG + Chr4:82319134-82319153 MsG0480023222.01.T01:CDS 40.0%
!!! GGTGGTTGTTGTTGTTTTTG+TGG - Chr4:82318719-82318738 None:intergenic 40.0%
!!! GGTTGTTGTTGTTTTTGTGG+TGG - Chr4:82318716-82318735 None:intergenic 40.0%
!!! TGGTTATGTAGTTTTGTGGG+AGG - Chr4:82318791-82318810 None:intergenic 40.0%
!!! TGTTGTTGTTTTTGTGGTGG+TGG - Chr4:82318713-82318732 None:intergenic 40.0%
!!! TTATGTAGTTTTGTGGGAGG+AGG - Chr4:82318788-82318807 None:intergenic 40.0%
AACCGTCTACACAGGATCAT+CGG + Chr4:82319004-82319023 MsG0480023222.01.T01:CDS 45.0%
AGCCTCATTGAAGGTGATAG+AGG + Chr4:82322294-82322313 MsG0480023222.01.T01:CDS 45.0%
ATCAGGGCCCTTTATGTTTG+AGG + Chr4:82320171-82320190 MsG0480023222.01.T01:intron 45.0%
ATCCGATGATCCTGTGTAGA+CGG - Chr4:82319009-82319028 None:intergenic 45.0%
ATTGCCGCTAACGACTTAAC+CGG - Chr4:82319377-82319396 None:intergenic 45.0%
CGGATAAACGAATACGCGTT+TGG + Chr4:82319024-82319043 MsG0480023222.01.T01:CDS 45.0%
GAAACCGGTTAAGTCGTTAG+CGG + Chr4:82319370-82319389 MsG0480023222.01.T01:CDS 45.0%
GAAATGTACCAGTAGACAGG+TGG - Chr4:82322033-82322052 None:intergenic 45.0%
GAAGAGAAGAGGGTCGTTAT+AGG + Chr4:82320834-82320853 MsG0480023222.01.T01:intron 45.0%
GCGAATCATATGGTTGTGAG+TGG + Chr4:82319200-82319219 MsG0480023222.01.T01:CDS 45.0%
GCGTTATCTACTCCGTTTCA+TGG + Chr4:82318880-82318899 MsG0480023222.01.T01:CDS 45.0%
GCTTTCGTTGACACGTACTT+CGG - Chr4:82321733-82321752 None:intergenic 45.0%
GTATGCACTTCGAAGAGAAG+AGG + Chr4:82320823-82320842 MsG0480023222.01.T01:intron 45.0%
TAAAGGGGAGTTGTGGATTC+CGG - Chr4:82321447-82321466 None:intergenic 45.0%
TATGTCTGATCGGTCTAGAG+GGG - Chr4:82321197-82321216 None:intergenic 45.0%
! CAATCCAGAGACGTTTTACG+TGG - Chr4:82318821-82318840 None:intergenic 45.0%
! CTAACGACTTAACCGGTTTC+CGG - Chr4:82319370-82319389 None:intergenic 45.0%
! TGGGAAGAGTGGTTAACTTG+CGG - Chr4:82318740-82318759 None:intergenic 45.0%
! TGTTGTGTTGGTGTTCTCGA+TGG + Chr4:82319341-82319360 MsG0480023222.01.T01:CDS 45.0%
! TTGATTTTGCCTTGCGGCTA+GGG - Chr4:82321575-82321594 None:intergenic 45.0%
!! AGTTTTGTGGGAGGAGGAAA+CGG - Chr4:82318782-82318801 None:intergenic 45.0%
!! GATGGGTCGTTTTGTTGTGT+TGG + Chr4:82319329-82319348 MsG0480023222.01.T01:CDS 45.0%
!! GTCTCTGATTTGTTGCTGAG+TGG + Chr4:82319266-82319285 MsG0480023222.01.T01:CDS 45.0%
!! GTTTCTGGTGCTGCTCTTAA+TGG + Chr4:82322484-82322503 MsG0480023222.01.T01:CDS 45.0%
!! TTTGATTTTGCCTTGCGGCT+AGG - Chr4:82321576-82321595 None:intergenic 45.0%
!!! ACGTGCTTTTTTTCTCCGAC+GGG - Chr4:82319056-82319075 None:intergenic 45.0%
AAAGGGGAGTTGTGGATTCC+GGG - Chr4:82321446-82321465 None:intergenic 50.0%
AACACAGAAACGACGCCGTT+TGG - Chr4:82319437-82319456 None:intergenic 50.0%
AACGATGGAACCGTCTACAC+AGG + Chr4:82318996-82319015 MsG0480023222.01.T01:CDS 50.0%
AACGGAGTAGATAACGCCGT+TGG - Chr4:82318877-82318896 None:intergenic 50.0%
ACACTGAACCGTCCTCGTTT+AGG - Chr4:82319127-82319146 None:intergenic 50.0%
AGGGGTAGATTTAGTGGCTG+AGG - Chr4:82322569-82322588 None:intergenic 50.0%
AGTTCCAACCCAGGTGAAAG+AGG - Chr4:82320917-82320936 None:intergenic 50.0%
CACTGAACCGTCCTCGTTTA+GGG - Chr4:82319126-82319145 None:intergenic 50.0%
CCAGTCGTATATATGGGTCC+CGG + Chr4:82321425-82321444 MsG0480023222.01.T01:intron 50.0%
CCTCAAAGCACATGAAGACG+CGG + Chr4:82318953-82318972 MsG0480023222.01.T01:CDS 50.0%
CGCGTCTTCATGTGCTTTGA+GGG - Chr4:82318955-82318974 None:intergenic 50.0%
CGGGACCCATATATACGACT+GGG - Chr4:82321427-82321446 None:intergenic 50.0%
CTGATCGGACGGTTAGGATT+TGG + Chr4:82319294-82319313 MsG0480023222.01.T01:CDS 50.0%
GACGGTTAGGATTTGGAAGC+GGG + Chr4:82319301-82319320 MsG0480023222.01.T01:CDS 50.0%
GCGGTTGCAGTTTCTAACGA+TGG + Chr4:82318981-82319000 MsG0480023222.01.T01:CDS 50.0%
GCTTTAGCCCTAAACGAGGA+CGG + Chr4:82319116-82319135 MsG0480023222.01.T01:CDS 50.0%
GGACGGTTAGGATTTGGAAG+CGG + Chr4:82319300-82319319 MsG0480023222.01.T01:CDS 50.0%
GGCGTCGTTTCTGTGTTTAG+TGG + Chr4:82319440-82319459 MsG0480023222.01.T01:CDS 50.0%
GTAGATAACGCCGTTGGAGA+CGG - Chr4:82318871-82318890 None:intergenic 50.0%
TACACTGAGCCGTTAGAGAC+TGG - Chr4:82321989-82322008 None:intergenic 50.0%
TGAACCTCTTTCACCTGGGT+TGG + Chr4:82320910-82320929 MsG0480023222.01.T01:intron 50.0%
! AGAGACGTTTTACGTGGCGA+CGG - Chr4:82318815-82318834 None:intergenic 50.0%
! GCACGTTCTAGTTGCGACTT+TGG + Chr4:82319070-82319089 MsG0480023222.01.T01:CDS 50.0%
! TGCTGAGTGGTTCTGCTGAT+CGG + Chr4:82319279-82319298 MsG0480023222.01.T01:CDS 50.0%
! TTGGTGTTCTCGATGGTCAC+CGG + Chr4:82319348-82319367 MsG0480023222.01.T01:CDS 50.0%
!! GAAGAGTGGTTAACTTGCGG+TGG - Chr4:82318737-82318756 None:intergenic 50.0%
!! GGTGCTGCTCTTAATGGGAT+TGG + Chr4:82322490-82322509 MsG0480023222.01.T01:CDS 50.0%
ACACTACGCCACCTGTCTAC+TGG + Chr4:82322022-82322041 MsG0480023222.01.T01:intron 55.0%
ACATGAAGACGCGGTCAACG+CGG + Chr4:82318962-82318981 MsG0480023222.01.T01:CDS 55.0%
AGCGATAAACCCTAGCCGCA+AGG + Chr4:82321563-82321582 MsG0480023222.01.T01:intron 55.0%
CCGCGTCTTCATGTGCTTTG+AGG - Chr4:82318956-82318975 None:intergenic 55.0%
CCGGGACCCATATATACGAC+TGG - Chr4:82321428-82321447 None:intergenic 55.0%
GTCGCCACGTAAAACGTCTC+TGG + Chr4:82318814-82318833 MsG0480023222.01.T01:CDS 55.0%
GTTCTGCTGATCGGACGGTT+AGG + Chr4:82319288-82319307 MsG0480023222.01.T01:CDS 55.0%
TCTCGATGGTCACCGGAAAC+CGG + Chr4:82319355-82319374 MsG0480023222.01.T01:CDS 55.0%
TGAACATGCCGACGCTGTCA+CGG + Chr4:82318839-82318858 MsG0480023222.01.T01:CDS 55.0%
TGGTTGTGAGTGGGGCTTTG+AGG + Chr4:82319210-82319229 MsG0480023222.01.T01:CDS 55.0%
TTTGTGGGAGGAGGAAACGG+CGG - Chr4:82318779-82318798 None:intergenic 55.0%
! ACGTTTTACGTGGCGACGGA+TGG - Chr4:82318811-82318830 None:intergenic 55.0%
! GAGTGGTTCTGCTGATCGGA+CGG + Chr4:82319283-82319302 MsG0480023222.01.T01:CDS 55.0%
! GGTTGTGAGTGGGGCTTTGA+GGG + Chr4:82319211-82319230 MsG0480023222.01.T01:CDS 55.0%
!! GTTGTGAGTGGGGCTTTGAG+GGG + Chr4:82319212-82319231 MsG0480023222.01.T01:CDS 55.0%
!! TGTGGTGGTGGTTCCAGACA+CGG - Chr4:82318701-82318720 None:intergenic 55.0%
!! TTGTGAGTGGGGCTTTGAGG+GGG + Chr4:82319213-82319232 MsG0480023222.01.T01:CDS 55.0%
ACGGACCTTGCCGTCTCCAA+CGG + Chr4:82318858-82318877 MsG0480023222.01.T01:CDS 60.0%
GGGTGTGATCTGGCCTCTCA+GGG + Chr4:82319503-82319522 MsG0480023222.01.T01:CDS 60.0%
GTCGTTGACGGTGGGAAGAG+TGG - Chr4:82318751-82318770 None:intergenic 60.0%
TAACGCCGTTGGAGACGGCA+AGG - Chr4:82318866-82318885 None:intergenic 60.0%
TGGGTGTGATCTGGCCTCTC+AGG + Chr4:82319502-82319521 MsG0480023222.01.T01:CDS 60.0%
ACGGCGGAGACGGTCGTTGA+CGG - Chr4:82318763-82318782 None:intergenic 65.0%
CGCGTTTGGGCGAAACCCGT+CGG + Chr4:82319038-82319057 MsG0480023222.01.T01:CDS 65.0%
CGGAGACGGTCGTTGACGGT+GGG - Chr4:82318759-82318778 None:intergenic 65.0%
GGAGGAGGAAACGGCGGAGA+CGG - Chr4:82318773-82318792 None:intergenic 65.0%
GGCAAGGTCCGTGACAGCGT+CGG - Chr4:82318850-82318869 None:intergenic 65.0%
GCGGAGACGGTCGTTGACGG+TGG - Chr4:82318760-82318779 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 82318666 82322685 82318666 ID=MsG0480023222.01;Name=MsG0480023222.01
Chr4 mRNA 82318666 82322685 82318666 ID=MsG0480023222.01.T01;Parent=MsG0480023222.01;Name=MsG0480023222.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0|0.5|1|1|1|2|91|432
Chr4 exon 82318666 82319524 82318666 ID=MsG0480023222.01.T01:exon:2440;Parent=MsG0480023222.01.T01
Chr4 exon 82322155 82322685 82322155 ID=MsG0480023222.01.T01:exon:2441;Parent=MsG0480023222.01.T01
Chr4 CDS 82318666 82319524 82318666 ID=MsG0480023222.01.T01:cds;Parent=MsG0480023222.01.T01
Chr4 CDS 82322155 82322594 82322155 ID=MsG0480023222.01.T01:cds;Parent=MsG0480023222.01.T01
Chr4 three_prime_UTR 82322595 82322685 82322595 ID=MsG0480023222.01.T01:three_prime_utr;Parent=MsG0480023222.01.T01
Gene Sequence

>MsG0480023222.01.T01

ATGGTCTTCACCACTCACCAAGACTGTAAAATCCGTGTCTGGAACCACCACCACAAAAACAACAACAACCACCGCAAGTTAACCACTCTTCCCACCGTCAACGACCGTCTCCGCCGTTTCCTCCTCCCACAAAACTACATAACCATCCGTCGCCACGTAAAACGTCTCTGGATTGAACATGCCGACGCTGTCACGGACCTTGCCGTCTCCAACGGCGTTATCTACTCCGTTTCATGGGACAAAACACTCAAAATATGGAGAATCTCTGATCTTCGTTGCTTAGAATCCCTCAAAGCACATGAAGACGCGGTCAACGCGGTTGCAGTTTCTAACGATGGAACCGTCTACACAGGATCATCGGATAAACGAATACGCGTTTGGGCGAAACCCGTCGGAGAAAAAAAGCACGTTCTAGTTGCGACTTTGGAGAAGCATAAATCAGCGGTTAATGCTTTAGCCCTAAACGAGGACGGTTCAGTGTTATTTTCAGGTGCATGCGATCGTTCGATATTAGTATGGGAACGAGAGGATAGTGCGAATCATATGGTTGTGAGTGGGGCTTTGAGGGGGCATCAGAAAGCAATACTGTGTTTGATCAACGTCTCTGATTTGTTGCTGAGTGGTTCTGCTGATCGGACGGTTAGGATTTGGAAGCGGGTTTATGATGGGTCGTTTTGTTGTGTTGGTGTTCTCGATGGTCACCGGAAACCGGTTAAGTCGTTAGCGGCAATTCAAGAGTATAATGATGAGGATGAAAGTCAAAGTTCTCCAAACGGCGTCGTTTCTGTGTTTAGTGGTTCTTTAGACGGTGAAATAAAGGTTTGGCAACTTTCTATTGGGTGTGATCTGGCCTCTCAGGTTGTTGAAATGGAACAATCTTCCAAGCCAAATGTACCTTCTATACCTGAAATCAAAATGAAACAAAATCAGAAAAAGAAGATTCCTTCGCCAAAGGAATTGATATCCTATTATGAATCACAAGGGATGGATTCACAAGAAGCCTCATTGAAGGTGATAGAGGATTTACAAAAGGCTTTGTTTGGAGTAATTTCATCTGGTAAAGGTAAAAAGGATAGGCTTATGAATGAATCTTCTAGAAAGATGGATTCAGTTAACCAAAGACTTGCTATACTTGACATGAAGCTTGATACTAAGCCTGGATTTGTTGAGACATTTGCAATTGGGGTTGTTTCTGGTGCTGCTCTTAATGGGATTGGTGCTATAACGCCTCACATTCTTTCACCTATTGCTCAGATTTGGAATTCTGTTACCTCAGCCACTAAATCTACCCCTCAATGA
Protein sequence

>MsG0480023222.01.T01

MVFTTHQDCKIRVWNHHHKNNNNHRKLTTLPTVNDRLRRFLLPQNYITIRRHVKRLWIEHADAVTDLAVSNGVIYSVSWDKTLKIWRISDLRCLESLKAHEDAVNAVAVSNDGTVYTGSSDKRIRVWAKPVGEKKHVLVATLEKHKSAVNALALNEDGSVLFSGACDRSILVWEREDSANHMVVSGALRGHQKAILCLINVSDLLLSGSADRTVRIWKRVYDGSFCCVGVLDGHRKPVKSLAAIQEYNDEDESQSSPNGVVSVFSGSLDGEIKVWQLSIGCDLASQVVEMEQSSKPNVPSIPEIKMKQNQKKKIPSPKELISYYESQGMDSQEASLKVIEDLQKALFGVISSGKGKKDRLMNESSRKMDSVNQRLAILDMKLDTKPGFVETFAIGVVSGAALNGIGAITPHILSPIAQIWNSVTSATKSTPQ*