Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023227.01.T01 | XP_013446722.1 | 94.524 | 694 | 30 | 2 | 1 | 686 | 1 | 694 | 0 | 1324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023227.01.T01 | Q9C5S1 | 55.275 | 436 | 154 | 3 | 37 | 455 | 62 | 473 | 5.64E-172 | 514 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023227.01.T01 | A0A072TTA4 | 94.524 | 694 | 30 | 2 | 1 | 686 | 1 | 694 | 0.0 | 1324 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005272.01 | MsG0480023227.01 | 0.808174 | 3.525568e-50 | 2.002006e-47 |
| MsG0480018788.01 | MsG0480023227.01 | -0.806973 | 6.342937e-50 | 3.490400e-47 |
| MsG0480023227.01 | MsG0880042494.01 | 0.809569 | 1.773620e-50 | 1.045006e-47 |
| MsG0480023227.01 | MsG0880044792.01 | 0.806978 | 6.327392e-50 | 3.482300e-47 |
| MsG0480023227.01 | MsG0880045683.01 | 0.818074 | 2.369594e-52 | 1.755967e-49 |
| MsG0380018007.01 | MsG0480023227.01 | 0.805340 | 1.399367e-49 | 7.384719e-47 |
| MsG0280007052.01 | MsG0480023227.01 | 0.800763 | 1.237410e-48 | 5.809211e-46 |
| MsG0280007896.01 | MsG0480023227.01 | 0.814612 | 1.410099e-51 | 9.506200e-49 |
| MsG0280010173.01 | MsG0480023227.01 | 0.808506 | 2.995449e-50 | 1.715788e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023227.01.T01 | MTR_8g089710 | 94.524 | 694 | 30 | 2 | 1 | 686 | 1 | 694 | 0.0 | 1324 |
| MsG0480023227.01.T01 | MTR_3g086540 | 64.873 | 669 | 180 | 17 | 18 | 669 | 14 | 644 | 0.0 | 727 |
| MsG0480023227.01.T01 | MTR_7g023250 | 55.208 | 480 | 145 | 9 | 3 | 441 | 42 | 492 | 4.33e-168 | 504 |
| MsG0480023227.01.T01 | MTR_4g117170 | 34.307 | 137 | 89 | 1 | 111 | 247 | 41 | 176 | 6.75e-20 | 88.2 |
| MsG0480023227.01.T01 | MTR_3g498735 | 31.973 | 147 | 95 | 2 | 109 | 251 | 676 | 821 | 4.76e-16 | 82.8 |
| MsG0480023227.01.T01 | MTR_8g100000 | 34.848 | 132 | 80 | 3 | 115 | 242 | 696 | 825 | 3.80e-15 | 80.1 |
| MsG0480023227.01.T01 | MTR_8g100000 | 34.848 | 132 | 80 | 3 | 115 | 242 | 738 | 867 | 5.21e-15 | 79.7 |
| MsG0480023227.01.T01 | MTR_5g084720 | 30.769 | 143 | 92 | 2 | 111 | 253 | 51 | 186 | 1.05e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023227.01.T01 | AT3G06110 | 35.915 | 142 | 90 | 1 | 106 | 247 | 23 | 163 | 3.71e-23 | 97.1 |
| MsG0480023227.01.T01 | AT3G06110 | 35.915 | 142 | 90 | 1 | 106 | 247 | 23 | 163 | 3.71e-23 | 97.1 |
| MsG0480023227.01.T01 | AT3G23610 | 35.099 | 151 | 93 | 2 | 105 | 255 | 48 | 193 | 1.69e-22 | 96.7 |
| MsG0480023227.01.T01 | AT3G23610 | 36.170 | 141 | 89 | 1 | 105 | 245 | 48 | 187 | 1.96e-22 | 96.3 |
| MsG0480023227.01.T01 | AT3G23610 | 36.170 | 141 | 89 | 1 | 105 | 245 | 48 | 187 | 2.61e-22 | 95.9 |
| MsG0480023227.01.T01 | AT3G23610 | 36.170 | 141 | 89 | 1 | 105 | 245 | 48 | 187 | 2.81e-22 | 95.5 |
| MsG0480023227.01.T01 | AT3G23610 | 36.170 | 141 | 89 | 1 | 105 | 245 | 48 | 187 | 5.76e-22 | 95.5 |
| MsG0480023227.01.T01 | AT3G06110 | 36.364 | 143 | 78 | 3 | 106 | 247 | 23 | 153 | 1.26e-19 | 86.7 |
| MsG0480023227.01.T01 | AT5G23720 | 31.081 | 148 | 97 | 2 | 109 | 252 | 705 | 851 | 4.30e-15 | 79.7 |
| MsG0480023227.01.T01 | AT5G23720 | 31.081 | 148 | 97 | 2 | 109 | 252 | 696 | 842 | 4.86e-15 | 79.7 |
| MsG0480023227.01.T01 | AT5G23720 | 31.293 | 147 | 96 | 2 | 109 | 251 | 621 | 766 | 5.09e-15 | 79.7 |
| MsG0480023227.01.T01 | AT2G04550 | 31.690 | 142 | 86 | 3 | 111 | 250 | 54 | 186 | 7.61e-13 | 69.7 |
| MsG0480023227.01.T01 | AT2G04550 | 34.146 | 123 | 70 | 3 | 111 | 231 | 54 | 167 | 3.40e-12 | 65.9 |
Find 167 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAGTATGATTTGGATTT+TGG | 0.138704 | 4:+82363368 | MsG0480023227.01.T01:CDS |
| TCTTCATTTGGTACCTAAAA+TGG | 0.154315 | 4:+82363007 | MsG0480023227.01.T01:CDS |
| CCTTCCTCAAAGCATCTTTC+TGG | 0.162975 | 4:+82363632 | MsG0480023227.01.T01:CDS |
| GTAAACATGTTCAGCGATTC+TGG | 0.226973 | 4:-82362508 | None:intergenic |
| GATGCATCTTTAACATAAAA+AGG | 0.233790 | 4:-82363968 | None:intergenic |
| ATGAAGAGCCAATGGAGTTT+TGG | 0.246467 | 4:+82363213 | MsG0480023227.01.T01:CDS |
| CGGCCGCCATCGCCTTCTTC+TGG | 0.261754 | 4:+82363926 | MsG0480023227.01.T01:CDS |
| TTATAAAACTCTTTGGTTGC+AGG | 0.267867 | 4:+82362644 | MsG0480023227.01.T01:CDS |
| TTCCTTCTGCTATATATGTT+TGG | 0.269303 | 4:+82363084 | MsG0480023227.01.T01:CDS |
| CTCGCCGAAGGACGAATTAA+AGG | 0.272423 | 4:+82363562 | MsG0480023227.01.T01:CDS |
| GGCGACTTGGAACAGAATTT+CGG | 0.292395 | 4:-82363812 | None:intergenic |
| CGCGCCGCCACCGGTGGCGG+CGG | 0.292813 | 4:+82362201 | MsG0480023227.01.T01:CDS |
| GCGACTTGGAACAGAATTTC+GGG | 0.294998 | 4:-82363811 | None:intergenic |
| GAAAGTTGATGAGTATGATT+TGG | 0.313440 | 4:+82363361 | MsG0480023227.01.T01:CDS |
| TTCAATGCTGCGTTTGTTGA+TGG | 0.316945 | 4:-82362358 | None:intergenic |
| GACCGCGCCGCCACCGGTGG+CGG | 0.317111 | 4:+82362198 | MsG0480023227.01.T01:CDS |
| ACTGCCGCCGCCACCGGTGG+CGG | 0.323060 | 4:-82362205 | None:intergenic |
| CGAGGTTGTATCACAGCATT+TGG | 0.338040 | 4:-82363543 | None:intergenic |
| AATTTGTTTATAAAACTCTT+TGG | 0.351524 | 4:+82362637 | MsG0480023227.01.T01:CDS |
| ACCTTATGATCCTCTTCATT+TGG | 0.352879 | 4:+82362995 | MsG0480023227.01.T01:CDS |
| TCTTCACAAACACAAAGAAT+TGG | 0.364458 | 4:-82363191 | None:intergenic |
| TGTTTCTAGATCAACCTCTT+TGG | 0.364465 | 4:+82362770 | MsG0480023227.01.T01:CDS |
| TGACAAGCAAAACCCATGTT+AGG | 0.365480 | 4:-82362876 | None:intergenic |
| AAGCATCTTTCTGGTTCATC+TGG | 0.367552 | 4:+82363641 | MsG0480023227.01.T01:CDS |
| CGGGCTGTTACTTAAAGAAC+AGG | 0.368529 | 4:-82363792 | None:intergenic |
| TACATCATAAGAACAGAATT+AGG | 0.371833 | 4:-82362954 | None:intergenic |
| GGAACTATCACAATCAGAAT+TGG | 0.373736 | 4:-82363849 | None:intergenic |
| GTGGCGGCGGCAGTGGTTAC+CGG | 0.375091 | 4:+82362214 | MsG0480023227.01.T01:CDS |
| TCTAACCAGCAATTATTGTT+GGG | 0.379145 | 4:+82363245 | MsG0480023227.01.T01:CDS |
| TTCTAACCAGCAATTATTGT+TGG | 0.382236 | 4:+82363244 | MsG0480023227.01.T01:CDS |
| ATCGCCTTGTTCCTAGTGTT+GGG | 0.389681 | 4:+82363726 | MsG0480023227.01.T01:CDS |
| CACACCACGGTAGGGAGAAA+AGG | 0.398444 | 4:+82364064 | MsG0480023227.01.T01:CDS |
| CTCACGTGCTTAATTGTGTT+GGG | 0.406173 | 4:+82362586 | MsG0480023227.01.T01:CDS |
| GCCACCGGTGGCGGCGGCAG+TGG | 0.406304 | 4:+82362207 | MsG0480023227.01.T01:CDS |
| TTCTGATAAGGCAGAGGTGG+TGG | 0.406913 | 4:+82363271 | MsG0480023227.01.T01:CDS |
| TGGTTATTGCTTATCTTATG+TGG | 0.412023 | 4:+82362790 | MsG0480023227.01.T01:CDS |
| GATCGCCTTGTTCCTAGTGT+TGG | 0.412077 | 4:+82363725 | MsG0480023227.01.T01:CDS |
| AACTCCCCAACAATAATTGC+TGG | 0.414528 | 4:-82363250 | None:intergenic |
| ATACTTGTTATATCTTCTGT+TGG | 0.415804 | 4:-82362672 | None:intergenic |
| TTCACCTTTAATTCGTCCTT+CGG | 0.418936 | 4:-82363566 | None:intergenic |
| GATCTGACGATCTCGGAGTT+TGG | 0.423310 | 4:+82362397 | MsG0480023227.01.T01:CDS |
| TCGCAACAGTGTCGCTTCCT+AGG | 0.429130 | 4:-82362530 | None:intergenic |
| CATCTTCCTCTTGGTGTCTC+CGG | 0.430751 | 4:-82362420 | None:intergenic |
| GACATTCACTTTGCCTGCCC+GGG | 0.439145 | 4:+82364201 | MsG0480023227.01.T01:CDS |
| ACTCACGTGCTTAATTGTGT+TGG | 0.447332 | 4:+82362585 | MsG0480023227.01.T01:CDS |
| TGGTGATGGTGTTGTTGATA+CGG | 0.449571 | 4:+82363325 | MsG0480023227.01.T01:CDS |
| TGTTCTTATGATGTATAGAA+TGG | 0.449870 | 4:+82362962 | MsG0480023227.01.T01:CDS |
| CCCTCTGCGCTCTGCAATGG+AGG | 0.450745 | 4:-82364101 | None:intergenic |
| GTTGGCGGCCTTCTGTTTGA+AGG | 0.457206 | 4:-82362276 | None:intergenic |
| ATTGTTGGGGAGTTCTGATA+AGG | 0.458119 | 4:+82363259 | MsG0480023227.01.T01:CDS |
| GGTGATGGTGTTGTTGATAC+GGG | 0.460092 | 4:+82363326 | MsG0480023227.01.T01:CDS |
| TTCCTGCTAGAGAAAATAGC+TGG | 0.462361 | 4:+82363465 | MsG0480023227.01.T01:CDS |
| AGACATTCACTTTGCCTGCC+CGG | 0.464940 | 4:+82364200 | MsG0480023227.01.T01:CDS |
| TTTGAGGATGTTAGATTACA+AGG | 0.468640 | 4:+82362717 | MsG0480023227.01.T01:CDS |
| TCATACTCATCAACTTTCCT+AGG | 0.468793 | 4:-82363356 | None:intergenic |
| TCTGCTATATATGTTTGGAT+TGG | 0.474881 | 4:+82363089 | MsG0480023227.01.T01:CDS |
| TCCTGTATTAGATACAGAAA+AGG | 0.481769 | 4:-82363429 | None:intergenic |
| TTCACCGCCGCCGACGGTGT+TGG | 0.484830 | 4:-82362294 | None:intergenic |
| CTAAGGAGGAAGCTTGCTAA+TGG | 0.485206 | 4:+82363494 | MsG0480023227.01.T01:CDS |
| TGAACCAGAAAGATGCTTTG+AGG | 0.486329 | 4:-82363636 | None:intergenic |
| ACCAAATGAAGAGGATCATA+AGG | 0.490423 | 4:-82362996 | None:intergenic |
| CGCCGCCACCGGTGGCGGCG+CGG | 0.491553 | 4:-82362200 | None:intergenic |
| GCCGCCAACACCGTCGGCGG+CGG | 0.491668 | 4:+82362290 | MsG0480023227.01.T01:CDS |
| GCCTTCTGTTTGAAGGTGAA+CGG | 0.495651 | 4:-82362269 | None:intergenic |
| ACTCCCTCTGCGCTCTGCAA+TGG | 0.496011 | 4:-82364104 | None:intergenic |
| TTGATACGGGGATTCATCCT+AGG | 0.497396 | 4:+82363339 | MsG0480023227.01.T01:CDS |
| GGTGGTAAAGAATCAACAAC+AGG | 0.500069 | 4:-82363611 | None:intergenic |
| GATGAAAGAATGGAGATTGA+TGG | 0.502040 | 4:+82363305 | MsG0480023227.01.T01:CDS |
| ACAAGGCGATCAACGAGTAC+AGG | 0.502172 | 4:-82363713 | None:intergenic |
| GTAACCACTGCCGCCGCCAC+CGG | 0.503733 | 4:-82362211 | None:intergenic |
| GTGATTGAACATCTTCCTCT+TGG | 0.506958 | 4:-82362429 | None:intergenic |
| ATTTGTCATTCATGTCCTCT+CGG | 0.507731 | 4:+82363906 | MsG0480023227.01.T01:CDS |
| AGGAGAAAATGTCGGCGACT+TGG | 0.508270 | 4:-82363825 | None:intergenic |
| ACCGCCGCCGACGGTGTTGG+CGG | 0.510545 | 4:-82362291 | None:intergenic |
| TACCAGGACTTTGTGAGCAC+GGG | 0.513706 | 4:-82364170 | None:intergenic |
| TGACGATCTCGGAGTTTGGC+CGG | 0.513962 | 4:+82362401 | MsG0480023227.01.T01:CDS |
| AAAATAGCTGGGGAAGACTA+AGG | 0.519760 | 4:+82363477 | MsG0480023227.01.T01:CDS |
| GACGGATTCTGATGAAAGAA+TGG | 0.520273 | 4:+82363295 | MsG0480023227.01.T01:CDS |
| ATTGAAGAATGGCCAAGTGC+TGG | 0.521388 | 4:+82362375 | MsG0480023227.01.T01:CDS |
| CTTGCTAATGGCATCATGAA+AGG | 0.522231 | 4:+82363506 | MsG0480023227.01.T01:CDS |
| TTGTTTAATCACACCACGGT+AGG | 0.523071 | 4:+82364055 | MsG0480023227.01.T01:CDS |
| GTTCTTGTTCATTGTTGTCA+AGG | 0.523163 | 4:+82362747 | MsG0480023227.01.T01:CDS |
| ATCAAATTATCGTCCCGGGC+AGG | 0.524067 | 4:-82364214 | None:intergenic |
| CCTCCATTGCAGAGCGCAGA+GGG | 0.524253 | 4:+82364101 | MsG0480023227.01.T01:CDS |
| AGAACAGAATTAGGACTTGA+AGG | 0.525195 | 4:-82362945 | None:intergenic |
| ACACCACGGTAGGGAGAAAA+GGG | 0.525369 | 4:+82364065 | MsG0480023227.01.T01:CDS |
| ACCACTGCCGCCGCCACCGG+TGG | 0.528267 | 4:-82362208 | None:intergenic |
| GAATCAAGCGCTTTAGCACA+AGG | 0.528424 | 4:-82363038 | None:intergenic |
| AGCTCGGACAAGGCAAAAGA+TGG | 0.532243 | 4:+82363689 | MsG0480023227.01.T01:CDS |
| ACTTCATCAAATTATCGTCC+CGG | 0.534158 | 4:-82364219 | None:intergenic |
| TAAGGCAGAGGTGGTGGGGA+CGG | 0.535156 | 4:+82363277 | MsG0480023227.01.T01:CDS |
| CTAACCAGCAATTATTGTTG+GGG | 0.536766 | 4:+82363246 | MsG0480023227.01.T01:CDS |
| GATACCAACATTTGAGGCGG+CGG | 0.542124 | 4:-82364130 | None:intergenic |
| CCTGTATTAGATACAGAAAA+GGG | 0.542186 | 4:-82363428 | None:intergenic |
| CTGCGTTTGTTGATGGAAAG+AGG | 0.544376 | 4:-82362351 | None:intergenic |
| TCCTGCTAGAGAAAATAGCT+GGG | 0.544513 | 4:+82363466 | MsG0480023227.01.T01:CDS |
| AGTGCTGGATCTGACGATCT+CGG | 0.544807 | 4:+82362390 | MsG0480023227.01.T01:CDS |
| ATCCCGTGCTCACAAAGTCC+TGG | 0.544939 | 4:+82364168 | MsG0480023227.01.T01:CDS |
| GCTTATCTTATGTGGAGAGA+AGG | 0.545756 | 4:+82362798 | MsG0480023227.01.T01:CDS |
| TGCACGATCGGCAGCTACGC+AGG | 0.546719 | 4:+82363142 | MsG0480023227.01.T01:CDS |
| TCAGACCAATGTGTAGATGC+AGG | 0.547916 | 4:-82363884 | None:intergenic |
| ACAGAAGATACCAACATTTG+AGG | 0.549613 | 4:-82364136 | None:intergenic |
| AACGACCGCGCCGCCACCGG+TGG | 0.551406 | 4:+82362195 | MsG0480023227.01.T01:CDS |
| AGAGGAAGATGTTCAATCAC+TGG | 0.551453 | 4:+82362432 | MsG0480023227.01.T01:CDS |
| TCTGATAAGGCAGAGGTGGT+GGG | 0.553929 | 4:+82363272 | MsG0480023227.01.T01:CDS |
| AGCATCTTTGCGAAGTGAAG+AGG | 0.559053 | 4:-82364005 | None:intergenic |
| TGAATGTCTGTGATCTTACC+AGG | 0.560885 | 4:-82364186 | None:intergenic |
| CTTTAATTCGTCCTTCGGCG+AGG | 0.562509 | 4:-82363561 | None:intergenic |
| ACAAACGCAGCATTGAAGAA+TGG | 0.562904 | 4:+82362364 | MsG0480023227.01.T01:CDS |
| AGTAACGACCGCGCCGCCAC+CGG | 0.567192 | 4:+82362192 | MsG0480023227.01.T01:CDS |
| TGGTGTTACAAATCCTAACA+TGG | 0.568450 | 4:+82362863 | MsG0480023227.01.T01:CDS |
| AGATGCAGGCGAAAATGTAA+AGG | 0.571187 | 4:-82363870 | None:intergenic |
| CTTCATCAAATTATCGTCCC+GGG | 0.572160 | 4:-82364218 | None:intergenic |
| CCTCTGCGCTCTGCAATGGA+GGG | 0.572567 | 4:-82364100 | None:intergenic |
| TAAACCGCCGCCTCAAATGT+TGG | 0.573060 | 4:+82364126 | MsG0480023227.01.T01:CDS |
| CATTATGTCAAGAATGCTCG+TGG | 0.574766 | 4:+82362843 | MsG0480023227.01.T01:CDS |
| AGATCGTCAGATCCAGCACT+TGG | 0.575830 | 4:-82362387 | None:intergenic |
| AGAGCAACCCAAAACTCCAT+TGG | 0.576878 | 4:-82363221 | None:intergenic |
| CAGAAGGCCGCCAACACCGT+CGG | 0.577132 | 4:+82362284 | MsG0480023227.01.T01:CDS |
| TATAGATAGCAGCTCGGACA+AGG | 0.578337 | 4:+82363679 | MsG0480023227.01.T01:CDS |
| TGTTTAATCACACCACGGTA+GGG | 0.581679 | 4:+82364056 | MsG0480023227.01.T01:CDS |
| ATCCAAACATATATAGCAGA+AGG | 0.583455 | 4:-82363086 | None:intergenic |
| CAAGGCGATCAACGAGTACA+GGG | 0.584046 | 4:-82363712 | None:intergenic |
| TTACCAGGACTTTGTGAGCA+CGG | 0.586809 | 4:-82364171 | None:intergenic |
| ACCGTTCACCTTCAAACAGA+AGG | 0.590953 | 4:+82362268 | MsG0480023227.01.T01:CDS |
| GCTGAATCAAGTCCAGAAGA+AGG | 0.592092 | 4:-82363938 | None:intergenic |
| AGAGGATCATAAGGTGAATG+AGG | 0.594160 | 4:-82362987 | None:intergenic |
| GGACGAATTAAAGGTGAATG+TGG | 0.594243 | 4:+82363571 | MsG0480023227.01.T01:CDS |
| ATGGAAAGAGGACGAAGCGG+TGG | 0.594925 | 4:-82362339 | None:intergenic |
| AAGATAAGCAATAACCAAAG+AGG | 0.595753 | 4:-82362784 | None:intergenic |
| GAAAGATGCTTTGAGGAAGG+TGG | 0.601886 | 4:-82363629 | None:intergenic |
| CCAGAAAGATGCTTTGAGGA+AGG | 0.603369 | 4:-82363632 | None:intergenic |
| TATGAGTTGTAATGCACGAT+CGG | 0.608229 | 4:+82363130 | MsG0480023227.01.T01:CDS |
| GGGGAGTTCTGATAAGGCAG+AGG | 0.609058 | 4:+82363265 | MsG0480023227.01.T01:CDS |
| CTGTGATACAACCTCGCCGA+AGG | 0.609111 | 4:+82363550 | MsG0480023227.01.T01:CDS |
| TTTCGCCTGCATCTACACAT+TGG | 0.611802 | 4:+82363879 | MsG0480023227.01.T01:CDS |
| AGAAGGCGATGGCGGCCGAG+AGG | 0.612251 | 4:-82363921 | None:intergenic |
| GGCAACGACGACCCAACACT+AGG | 0.613604 | 4:-82363737 | None:intergenic |
| TTGTGAAGATGAAGAGCCAA+TGG | 0.614791 | 4:+82363205 | MsG0480023227.01.T01:CDS |
| ACGACCCAACACTAGGAACA+AGG | 0.621202 | 4:-82363730 | None:intergenic |
| AGTCCAGAAGAAGGCGATGG+CGG | 0.623021 | 4:-82363929 | None:intergenic |
| TTTCACAAAGCACTTGCTGG+TGG | 0.624800 | 4:+82363395 | MsG0480023227.01.T01:CDS |
| GTGATGGTGTTGTTGATACG+GGG | 0.631108 | 4:+82363327 | MsG0480023227.01.T01:CDS |
| GCTAAAGCGCTTGATTCTCG+CGG | 0.631454 | 4:+82363044 | MsG0480023227.01.T01:CDS |
| AAGGCCGCCAACACCGTCGG+CGG | 0.632371 | 4:+82362287 | MsG0480023227.01.T01:CDS |
| TTTGCAGTGTCAGAAAAGAG+TGG | 0.633522 | 4:+82362902 | MsG0480023227.01.T01:CDS |
| GAGTTCTGATAAGGCAGAGG+TGG | 0.635116 | 4:+82363268 | MsG0480023227.01.T01:CDS |
| CTGATAAGGCAGAGGTGGTG+GGG | 0.636758 | 4:+82363273 | MsG0480023227.01.T01:CDS |
| CTATCACAATCAGAATTGGA+AGG | 0.646372 | 4:-82363845 | None:intergenic |
| GGGCTGTTACTTAAAGAACA+GGG | 0.646777 | 4:-82363791 | None:intergenic |
| CCCTCCATTGCAGAGCGCAG+AGG | 0.647201 | 4:+82364100 | MsG0480023227.01.T01:CDS |
| TCAAGTCCAGAAGAAGGCGA+TGG | 0.651509 | 4:-82363932 | None:intergenic |
| GGTGTTACAAATCCTAACAT+GGG | 0.653103 | 4:+82362864 | MsG0480023227.01.T01:CDS |
| CTATATTATAGATAGCAGCT+CGG | 0.662581 | 4:+82363673 | MsG0480023227.01.T01:CDS |
| AGAATGGAGATTGATGGTGA+TGG | 0.663820 | 4:+82363311 | MsG0480023227.01.T01:CDS |
| ATCGCTGAACATGTTTACCT+AGG | 0.665469 | 4:+82362513 | MsG0480023227.01.T01:CDS |
| CACTGTTGCGAAGAATCACG+AGG | 0.670634 | 4:+82362542 | MsG0480023227.01.T01:CDS |
| AGCGGTGGAAGCAACGATCG+TGG | 0.680931 | 4:-82362324 | None:intergenic |
| GAAGATACCAACATTTGAGG+CGG | 0.682503 | 4:-82364133 | None:intergenic |
| CTGACCGTGAAAATGTACTC+CGG | 0.684468 | 4:-82362233 | None:intergenic |
| GTATTAGATACAGAAAAGGG+TGG | 0.691133 | 4:-82363425 | None:intergenic |
| ATAGCTGGGGAAGACTAAGG+AGG | 0.691984 | 4:+82363480 | MsG0480023227.01.T01:CDS |
| GAATTGGAAGGAGAAAATGT+CGG | 0.694868 | 4:-82363833 | None:intergenic |
| TTGATGGAAAGAGGACGAAG+CGG | 0.697231 | 4:-82362342 | None:intergenic |
| CCTGCTAGAGAAAATAGCTG+GGG | 0.699748 | 4:+82363467 | MsG0480023227.01.T01:CDS |
| GAGGATGTTAGATTACAAGG+TGG | 0.721438 | 4:+82362720 | MsG0480023227.01.T01:CDS |
| GTTTGGCCGGAGACACCAAG+AGG | 0.740096 | 4:+82362414 | MsG0480023227.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGTTTATAAAACTCTT+TGG | + | Chr4:82362637-82362656 | MsG0480023227.01.T01:CDS | 15.0% |
| !!! | AATTCACTTTTGAAATATTC+AGG | - | Chr4:82362621-82362640 | None:intergenic | 20.0% |
| !!! | TGATGTTTTTGATTATTTTG+AGG | + | Chr4:82362701-82362720 | MsG0480023227.01.T01:CDS | 20.0% |
| ! | GATGCATCTTTAACATAAAA+AGG | - | Chr4:82363971-82363990 | None:intergenic | 25.0% |
| ! | TACATCATAAGAACAGAATT+AGG | - | Chr4:82362957-82362976 | None:intergenic | 25.0% |
| ! | TGTTCTTATGATGTATAGAA+TGG | + | Chr4:82362962-82362981 | MsG0480023227.01.T01:CDS | 25.0% |
| !!! | AATTTTGTTTAATCACACCA+CGG | + | Chr4:82364051-82364070 | MsG0480023227.01.T01:CDS | 25.0% |
| !!! | ATACTTGTTATATCTTCTGT+TGG | - | Chr4:82362675-82362694 | None:intergenic | 25.0% |
| !!! | ATGAGTATGATTTGGATTTT+GGG | + | Chr4:82363369-82363388 | MsG0480023227.01.T01:CDS | 25.0% |
| AAGATAAGCAATAACCAAAG+AGG | - | Chr4:82362787-82362806 | None:intergenic | 30.0% | |
| ATCCAAACATATATAGCAGA+AGG | - | Chr4:82363089-82363108 | None:intergenic | 30.0% | |
| CCTGTATTAGATACAGAAAA+GGG | - | Chr4:82363431-82363450 | None:intergenic | 30.0% | |
| CTATATTATAGATAGCAGCT+CGG | + | Chr4:82363673-82363692 | MsG0480023227.01.T01:CDS | 30.0% | |
| TCCTGTATTAGATACAGAAA+AGG | - | Chr4:82363432-82363451 | None:intergenic | 30.0% | |
| TCTAACCAGCAATTATTGTT+GGG | + | Chr4:82363245-82363264 | MsG0480023227.01.T01:CDS | 30.0% | |
| TCTGCTATATATGTTTGGAT+TGG | + | Chr4:82363089-82363108 | MsG0480023227.01.T01:CDS | 30.0% | |
| TCTTCACAAACACAAAGAAT+TGG | - | Chr4:82363194-82363213 | None:intergenic | 30.0% | |
| TCTTCATTTGGTACCTAAAA+TGG | + | Chr4:82363007-82363026 | MsG0480023227.01.T01:CDS | 30.0% | |
| TGGTTATTGCTTATCTTATG+TGG | + | Chr4:82362790-82362809 | MsG0480023227.01.T01:CDS | 30.0% | |
| TTATAAAACTCTTTGGTTGC+AGG | + | Chr4:82362644-82362663 | MsG0480023227.01.T01:CDS | 30.0% | |
| TTCCTTCTGCTATATATGTT+TGG | + | Chr4:82363084-82363103 | MsG0480023227.01.T01:CDS | 30.0% | |
| TTCTAACCAGCAATTATTGT+TGG | + | Chr4:82363244-82363263 | MsG0480023227.01.T01:CDS | 30.0% | |
| TTTGAGGATGTTAGATTACA+AGG | + | Chr4:82362717-82362736 | MsG0480023227.01.T01:CDS | 30.0% | |
| !! | ATTTTAGGTACCAAATGAAG+AGG | - | Chr4:82363008-82363027 | None:intergenic | 30.0% |
| !! | GAAAGTTGATGAGTATGATT+TGG | + | Chr4:82363361-82363380 | MsG0480023227.01.T01:CDS | 30.0% |
| !! | GATGAGTATGATTTGGATTT+TGG | + | Chr4:82363368-82363387 | MsG0480023227.01.T01:CDS | 30.0% |
| !!! | ACGAGGTTTTAAGAAAGAAT+GGG | + | Chr4:82362559-82362578 | MsG0480023227.01.T01:CDS | 30.0% |
| ACAGAAGATACCAACATTTG+AGG | - | Chr4:82364139-82364158 | None:intergenic | 35.0% | |
| ACCAAATGAAGAGGATCATA+AGG | - | Chr4:82362999-82363018 | None:intergenic | 35.0% | |
| ACCTTATGATCCTCTTCATT+TGG | + | Chr4:82362995-82363014 | MsG0480023227.01.T01:CDS | 35.0% | |
| ACTTCATCAAATTATCGTCC+CGG | - | Chr4:82364222-82364241 | None:intergenic | 35.0% | |
| AGAACAGAATTAGGACTTGA+AGG | - | Chr4:82362948-82362967 | None:intergenic | 35.0% | |
| ATTTGTCATTCATGTCCTCT+CGG | + | Chr4:82363906-82363925 | MsG0480023227.01.T01:CDS | 35.0% | |
| CTAACCAGCAATTATTGTTG+GGG | + | Chr4:82363246-82363265 | MsG0480023227.01.T01:CDS | 35.0% | |
| CTATCACAATCAGAATTGGA+AGG | - | Chr4:82363848-82363867 | None:intergenic | 35.0% | |
| GAATTGGAAGGAGAAAATGT+CGG | - | Chr4:82363836-82363855 | None:intergenic | 35.0% | |
| GATGAAAGAATGGAGATTGA+TGG | + | Chr4:82363305-82363324 | MsG0480023227.01.T01:CDS | 35.0% | |
| GGAACTATCACAATCAGAAT+TGG | - | Chr4:82363852-82363871 | None:intergenic | 35.0% | |
| GTATTAGATACAGAAAAGGG+TGG | - | Chr4:82363428-82363447 | None:intergenic | 35.0% | |
| GTTCTTGTTCATTGTTGTCA+AGG | + | Chr4:82362747-82362766 | MsG0480023227.01.T01:CDS | 35.0% | |
| TATGAGTTGTAATGCACGAT+CGG | + | Chr4:82363130-82363149 | MsG0480023227.01.T01:CDS | 35.0% | |
| TCATACTCATCAACTTTCCT+AGG | - | Chr4:82363359-82363378 | None:intergenic | 35.0% | |
| TTCACCTTTAATTCGTCCTT+CGG | - | Chr4:82363569-82363588 | None:intergenic | 35.0% | |
| ! | AAAGAATCTGATTTTCGACG+AGG | - | Chr4:82363770-82363789 | None:intergenic | 35.0% |
| ! | CCCTTTTCTGTATCTAATAC+AGG | + | Chr4:82363428-82363447 | MsG0480023227.01.T01:CDS | 35.0% |
| ! | GGTGTTACAAATCCTAACAT+GGG | + | Chr4:82362864-82362883 | MsG0480023227.01.T01:CDS | 35.0% |
| !! | ATTTTTCACAAAGCACTTGC+TGG | + | Chr4:82363392-82363411 | MsG0480023227.01.T01:CDS | 35.0% |
| !! | TGGTGTTACAAATCCTAACA+TGG | + | Chr4:82362863-82362882 | MsG0480023227.01.T01:CDS | 35.0% |
| !! | TGTTTCTAGATCAACCTCTT+TGG | + | Chr4:82362770-82362789 | MsG0480023227.01.T01:CDS | 35.0% |
| !!! | CAAGGCTTGTTAACCATTTT+AGG | - | Chr4:82363023-82363042 | None:intergenic | 35.0% |
| !!! | CACGAGGTTTTAAGAAAGAA+TGG | + | Chr4:82362558-82362577 | MsG0480023227.01.T01:CDS | 35.0% |
| AAAATAGCTGGGGAAGACTA+AGG | + | Chr4:82363477-82363496 | MsG0480023227.01.T01:CDS | 40.0% | |
| AACTCCCCAACAATAATTGC+TGG | - | Chr4:82363253-82363272 | None:intergenic | 40.0% | |
| ACTCACGTGCTTAATTGTGT+TGG | + | Chr4:82362585-82362604 | MsG0480023227.01.T01:CDS | 40.0% | |
| AGAGGAAGATGTTCAATCAC+TGG | + | Chr4:82362432-82362451 | MsG0480023227.01.T01:CDS | 40.0% | |
| AGAGGATCATAAGGTGAATG+AGG | - | Chr4:82362990-82363009 | None:intergenic | 40.0% | |
| AGATGCAGGCGAAAATGTAA+AGG | - | Chr4:82363873-82363892 | None:intergenic | 40.0% | |
| ATCGCTGAACATGTTTACCT+AGG | + | Chr4:82362513-82362532 | MsG0480023227.01.T01:CDS | 40.0% | |
| CATTATGTCAAGAATGCTCG+TGG | + | Chr4:82362843-82362862 | MsG0480023227.01.T01:CDS | 40.0% | |
| CTCACGTGCTTAATTGTGTT+GGG | + | Chr4:82362586-82362605 | MsG0480023227.01.T01:CDS | 40.0% | |
| CTTCATCAAATTATCGTCCC+GGG | - | Chr4:82364221-82364240 | None:intergenic | 40.0% | |
| CTTGCTAATGGCATCATGAA+AGG | + | Chr4:82363506-82363525 | MsG0480023227.01.T01:CDS | 40.0% | |
| GAAGATACCAACATTTGAGG+CGG | - | Chr4:82364136-82364155 | None:intergenic | 40.0% | |
| GAGGATGTTAGATTACAAGG+TGG | + | Chr4:82362720-82362739 | MsG0480023227.01.T01:CDS | 40.0% | |
| GCTTATCTTATGTGGAGAGA+AGG | + | Chr4:82362798-82362817 | MsG0480023227.01.T01:CDS | 40.0% | |
| GGACGAATTAAAGGTGAATG+TGG | + | Chr4:82363571-82363590 | MsG0480023227.01.T01:CDS | 40.0% | |
| GGTGGTAAAGAATCAACAAC+AGG | - | Chr4:82363614-82363633 | None:intergenic | 40.0% | |
| GTAAACATGTTCAGCGATTC+TGG | - | Chr4:82362511-82362530 | None:intergenic | 40.0% | |
| GTGATTGAACATCTTCCTCT+TGG | - | Chr4:82362432-82362451 | None:intergenic | 40.0% | |
| TCCTGCTAGAGAAAATAGCT+GGG | + | Chr4:82363466-82363485 | MsG0480023227.01.T01:CDS | 40.0% | |
| TGAACCAGAAAGATGCTTTG+AGG | - | Chr4:82363639-82363658 | None:intergenic | 40.0% | |
| TGAATGTCTGTGATCTTACC+AGG | - | Chr4:82364189-82364208 | None:intergenic | 40.0% | |
| TGACAAGCAAAACCCATGTT+AGG | - | Chr4:82362879-82362898 | None:intergenic | 40.0% | |
| TGTTTAATCACACCACGGTA+GGG | + | Chr4:82364056-82364075 | MsG0480023227.01.T01:CDS | 40.0% | |
| TTCCTGCTAGAGAAAATAGC+TGG | + | Chr4:82363465-82363484 | MsG0480023227.01.T01:CDS | 40.0% | |
| TTGTGAAGATGAAGAGCCAA+TGG | + | Chr4:82363205-82363224 | MsG0480023227.01.T01:CDS | 40.0% | |
| TTGTTTAATCACACCACGGT+AGG | + | Chr4:82364055-82364074 | MsG0480023227.01.T01:CDS | 40.0% | |
| TTTGCAGTGTCAGAAAAGAG+TGG | + | Chr4:82362902-82362921 | MsG0480023227.01.T01:CDS | 40.0% | |
| ! | ACAAACGCAGCATTGAAGAA+TGG | + | Chr4:82362364-82362383 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | ATGAAGAGCCAATGGAGTTT+TGG | + | Chr4:82363213-82363232 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | ATTGTTGGGGAGTTCTGATA+AGG | + | Chr4:82363259-82363278 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | ATTTTCTCTAGCAGGAAGCA+AGG | - | Chr4:82363462-82363481 | None:intergenic | 40.0% |
| ! | CATTTTCACGGTCAGTTTCA+TGG | + | Chr4:82362241-82362260 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | GACGGATTCTGATGAAAGAA+TGG | + | Chr4:82363295-82363314 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | GGGCTGTTACTTAAAGAACA+GGG | - | Chr4:82363794-82363813 | None:intergenic | 40.0% |
| ! | GTTACCGGAGTACATTTTCA+CGG | + | Chr4:82362229-82362248 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | TGAAGAGCCAATGGAGTTTT+GGG | + | Chr4:82363214-82363233 | MsG0480023227.01.T01:CDS | 40.0% |
| ! | TTCAATGCTGCGTTTGTTGA+TGG | - | Chr4:82362361-82362380 | None:intergenic | 40.0% |
| !! | AAGCATCTTTCTGGTTCATC+TGG | + | Chr4:82363641-82363660 | MsG0480023227.01.T01:CDS | 40.0% |
| !! | AGAATGGAGATTGATGGTGA+TGG | + | Chr4:82363311-82363330 | MsG0480023227.01.T01:CDS | 40.0% |
| !! | TGGTGATGGTGTTGTTGATA+CGG | + | Chr4:82363325-82363344 | MsG0480023227.01.T01:CDS | 40.0% |
| ACCGTTCACCTTCAAACAGA+AGG | + | Chr4:82362268-82362287 | MsG0480023227.01.T01:CDS | 45.0% | |
| AGAGCAACCCAAAACTCCAT+TGG | - | Chr4:82363224-82363243 | None:intergenic | 45.0% | |
| AGCATCTTTGCGAAGTGAAG+AGG | - | Chr4:82364008-82364027 | None:intergenic | 45.0% | |
| ATTGAAGAATGGCCAAGTGC+TGG | + | Chr4:82362375-82362394 | MsG0480023227.01.T01:CDS | 45.0% | |
| CCTGCTAGAGAAAATAGCTG+GGG | + | Chr4:82363467-82363486 | MsG0480023227.01.T01:CDS | 45.0% | |
| CGAGGTTGTATCACAGCATT+TGG | - | Chr4:82363546-82363565 | None:intergenic | 45.0% | |
| CTGACCGTGAAAATGTACTC+CGG | - | Chr4:82362236-82362255 | None:intergenic | 45.0% | |
| GAATCAAGCGCTTTAGCACA+AGG | - | Chr4:82363041-82363060 | None:intergenic | 45.0% | |
| GCCTTCTGTTTGAAGGTGAA+CGG | - | Chr4:82362272-82362291 | None:intergenic | 45.0% | |
| GCTGAATCAAGTCCAGAAGA+AGG | - | Chr4:82363941-82363960 | None:intergenic | 45.0% | |
| TATAGATAGCAGCTCGGACA+AGG | + | Chr4:82363679-82363698 | MsG0480023227.01.T01:CDS | 45.0% | |
| TCAGACCAATGTGTAGATGC+AGG | - | Chr4:82363887-82363906 | None:intergenic | 45.0% | |
| TTACCAGGACTTTGTGAGCA+CGG | - | Chr4:82364174-82364193 | None:intergenic | 45.0% | |
| TTGATACGGGGATTCATCCT+AGG | + | Chr4:82363339-82363358 | MsG0480023227.01.T01:CDS | 45.0% | |
| TTGATGGAAAGAGGACGAAG+CGG | - | Chr4:82362345-82362364 | None:intergenic | 45.0% | |
| TTTCGCCTGCATCTACACAT+TGG | + | Chr4:82363879-82363898 | MsG0480023227.01.T01:CDS | 45.0% | |
| ! | ATCGCCTTGTTCCTAGTGTT+GGG | + | Chr4:82363726-82363745 | MsG0480023227.01.T01:CDS | 45.0% |
| ! | CCTTCCTCAAAGCATCTTTC+TGG | + | Chr4:82363632-82363651 | MsG0480023227.01.T01:CDS | 45.0% |
| ! | CGGGCTGTTACTTAAAGAAC+AGG | - | Chr4:82363795-82363814 | None:intergenic | 45.0% |
| ! | CTGCGTTTGTTGATGGAAAG+AGG | - | Chr4:82362354-82362373 | None:intergenic | 45.0% |
| ! | GCGACTTGGAACAGAATTTC+GGG | - | Chr4:82363814-82363833 | None:intergenic | 45.0% |
| ! | GGCGACTTGGAACAGAATTT+CGG | - | Chr4:82363815-82363834 | None:intergenic | 45.0% |
| ! | TCTGATTTTCGACGAGGAGT+TGG | - | Chr4:82363764-82363783 | None:intergenic | 45.0% |
| ! | TTTCACAAAGCACTTGCTGG+TGG | + | Chr4:82363395-82363414 | MsG0480023227.01.T01:CDS | 45.0% |
| !! | CCAGAAAGATGCTTTGAGGA+AGG | - | Chr4:82363635-82363654 | None:intergenic | 45.0% |
| !! | CTAAGGAGGAAGCTTGCTAA+TGG | + | Chr4:82363494-82363513 | MsG0480023227.01.T01:CDS | 45.0% |
| !! | GAAAGATGCTTTGAGGAAGG+TGG | - | Chr4:82363632-82363651 | None:intergenic | 45.0% |
| !! | GGTGATGGTGTTGTTGATAC+GGG | + | Chr4:82363326-82363345 | MsG0480023227.01.T01:CDS | 45.0% |
| !! | GTGATGGTGTTGTTGATACG+GGG | + | Chr4:82363327-82363346 | MsG0480023227.01.T01:CDS | 45.0% |
| ACAAGGCGATCAACGAGTAC+AGG | - | Chr4:82363716-82363735 | None:intergenic | 50.0% | |
| ACACCACGGTAGGGAGAAAA+GGG | + | Chr4:82364065-82364084 | MsG0480023227.01.T01:CDS | 50.0% | |
| ACGACCCAACACTAGGAACA+AGG | - | Chr4:82363733-82363752 | None:intergenic | 50.0% | |
| AGACATTCACTTTGCCTGCC+CGG | + | Chr4:82364200-82364219 | MsG0480023227.01.T01:CDS | 50.0% | |
| AGATCGTCAGATCCAGCACT+TGG | - | Chr4:82362390-82362409 | None:intergenic | 50.0% | |
| AGCTCGGACAAGGCAAAAGA+TGG | + | Chr4:82363689-82363708 | MsG0480023227.01.T01:CDS | 50.0% | |
| AGGAGAAAATGTCGGCGACT+TGG | - | Chr4:82363828-82363847 | None:intergenic | 50.0% | |
| ATAGCTGGGGAAGACTAAGG+AGG | + | Chr4:82363480-82363499 | MsG0480023227.01.T01:CDS | 50.0% | |
| ATCAAATTATCGTCCCGGGC+AGG | - | Chr4:82364217-82364236 | None:intergenic | 50.0% | |
| CAAGGCGATCAACGAGTACA+GGG | - | Chr4:82363715-82363734 | None:intergenic | 50.0% | |
| CACTGTTGCGAAGAATCACG+AGG | + | Chr4:82362542-82362561 | MsG0480023227.01.T01:CDS | 50.0% | |
| CTCGCCGAAGGACGAATTAA+AGG | + | Chr4:82363562-82363581 | MsG0480023227.01.T01:CDS | 50.0% | |
| CTTTAATTCGTCCTTCGGCG+AGG | - | Chr4:82363564-82363583 | None:intergenic | 50.0% | |
| GATCTGACGATCTCGGAGTT+TGG | + | Chr4:82362397-82362416 | MsG0480023227.01.T01:CDS | 50.0% | |
| TAAACCGCCGCCTCAAATGT+TGG | + | Chr4:82364126-82364145 | MsG0480023227.01.T01:CDS | 50.0% | |
| TACCAGGACTTTGTGAGCAC+GGG | - | Chr4:82364173-82364192 | None:intergenic | 50.0% | |
| TCAAGTCCAGAAGAAGGCGA+TGG | - | Chr4:82363935-82363954 | None:intergenic | 50.0% | |
| TCTGATAAGGCAGAGGTGGT+GGG | + | Chr4:82363272-82363291 | MsG0480023227.01.T01:CDS | 50.0% | |
| TTCTGATAAGGCAGAGGTGG+TGG | + | Chr4:82363271-82363290 | MsG0480023227.01.T01:CDS | 50.0% | |
| ! | AGTGCTGGATCTGACGATCT+CGG | + | Chr4:82362390-82362409 | MsG0480023227.01.T01:CDS | 50.0% |
| ! | GAGTTCTGATAAGGCAGAGG+TGG | + | Chr4:82363268-82363287 | MsG0480023227.01.T01:CDS | 50.0% |
| ! | GATACCAACATTTGAGGCGG+CGG | - | Chr4:82364133-82364152 | None:intergenic | 50.0% |
| ! | GATCGCCTTGTTCCTAGTGT+TGG | + | Chr4:82363725-82363744 | MsG0480023227.01.T01:CDS | 50.0% |
| ! | GATTTTCGACGAGGAGTTGG+TGG | - | Chr4:82363761-82363780 | None:intergenic | 50.0% |
| ! | GCTAAAGCGCTTGATTCTCG+CGG | + | Chr4:82363044-82363063 | MsG0480023227.01.T01:CDS | 50.0% |
| !! | CATCTTCCTCTTGGTGTCTC+CGG | - | Chr4:82362423-82362442 | None:intergenic | 50.0% |
| !! | CCCCAGCTATTTTCTCTAGC+AGG | - | Chr4:82363470-82363489 | None:intergenic | 50.0% |
| AGTCCAGAAGAAGGCGATGG+CGG | - | Chr4:82363932-82363951 | None:intergenic | 55.0% | |
| ATCCCGTGCTCACAAAGTCC+TGG | + | Chr4:82364168-82364187 | MsG0480023227.01.T01:CDS | 55.0% | |
| ATGGAAAGAGGACGAAGCGG+TGG | - | Chr4:82362342-82362361 | None:intergenic | 55.0% | |
| CACACCACGGTAGGGAGAAA+AGG | + | Chr4:82364064-82364083 | MsG0480023227.01.T01:CDS | 55.0% | |
| CTGATAAGGCAGAGGTGGTG+GGG | + | Chr4:82363273-82363292 | MsG0480023227.01.T01:CDS | 55.0% | |
| CTGTGATACAACCTCGCCGA+AGG | + | Chr4:82363550-82363569 | MsG0480023227.01.T01:CDS | 55.0% | |
| GACATTCACTTTGCCTGCCC+GGG | + | Chr4:82364201-82364220 | MsG0480023227.01.T01:CDS | 55.0% | |
| GTTGGCGGCCTTCTGTTTGA+AGG | - | Chr4:82362279-82362298 | None:intergenic | 55.0% | |
| TGACGATCTCGGAGTTTGGC+CGG | + | Chr4:82362401-82362420 | MsG0480023227.01.T01:CDS | 55.0% | |
| ! | AGACCCTTTTCTCCCTACCG+TGG | - | Chr4:82364071-82364090 | None:intergenic | 55.0% |
| ! | GGGGAGTTCTGATAAGGCAG+AGG | + | Chr4:82363265-82363284 | MsG0480023227.01.T01:CDS | 55.0% |
| !! | TCGCAACAGTGTCGCTTCCT+AGG | - | Chr4:82362533-82362552 | None:intergenic | 55.0% |
| !! | TTGTTTTTCACCGCCGCCGA+CGG | - | Chr4:82362303-82362322 | None:intergenic | 55.0% |
| ACTCCCTCTGCGCTCTGCAA+TGG | - | Chr4:82364107-82364126 | None:intergenic | 60.0% | |
| AGCGGTGGAAGCAACGATCG+TGG | - | Chr4:82362327-82362346 | None:intergenic | 60.0% | |
| CCTCCATTGCAGAGCGCAGA+GGG | + | Chr4:82364101-82364120 | MsG0480023227.01.T01:CDS | 60.0% | |
| CCTCTGCGCTCTGCAATGGA+GGG | - | Chr4:82364103-82364122 | None:intergenic | 60.0% | |
| GGCAACGACGACCCAACACT+AGG | - | Chr4:82363740-82363759 | None:intergenic | 60.0% | |
| GTTTGGCCGGAGACACCAAG+AGG | + | Chr4:82362414-82362433 | MsG0480023227.01.T01:CDS | 60.0% | |
| !! | TAAGGCAGAGGTGGTGGGGA+CGG | + | Chr4:82363277-82363296 | MsG0480023227.01.T01:CDS | 60.0% |
| CAGAAGGCCGCCAACACCGT+CGG | + | Chr4:82362284-82362303 | MsG0480023227.01.T01:CDS | 65.0% | |
| CCCTCCATTGCAGAGCGCAG+AGG | + | Chr4:82364100-82364119 | MsG0480023227.01.T01:CDS | 65.0% | |
| CCCTCTGCGCTCTGCAATGG+AGG | - | Chr4:82364104-82364123 | None:intergenic | 65.0% | |
| TGCACGATCGGCAGCTACGC+AGG | + | Chr4:82363142-82363161 | MsG0480023227.01.T01:CDS | 65.0% | |
| AAGGCCGCCAACACCGTCGG+CGG | + | Chr4:82362287-82362306 | MsG0480023227.01.T01:CDS | 70.0% | |
| AGTAACGACCGCGCCGCCAC+CGG | + | Chr4:82362192-82362211 | MsG0480023227.01.T01:CDS | 70.0% | |
| CGGCCGCCATCGCCTTCTTC+TGG | + | Chr4:82363926-82363945 | MsG0480023227.01.T01:CDS | 70.0% | |
| GTAACCACTGCCGCCGCCAC+CGG | - | Chr4:82362214-82362233 | None:intergenic | 70.0% | |
| GTGGCGGCGGCAGTGGTTAC+CGG | + | Chr4:82362214-82362233 | MsG0480023227.01.T01:CDS | 70.0% | |
| TTCACCGCCGCCGACGGTGT+TGG | - | Chr4:82362297-82362316 | None:intergenic | 70.0% | |
| ! | AGAAGGCGATGGCGGCCGAG+AGG | - | Chr4:82363924-82363943 | None:intergenic | 70.0% |
| ! | ACCGCCGCCGACGGTGTTGG+CGG | - | Chr4:82362294-82362313 | None:intergenic | 75.0% |
| ! | AACGACCGCGCCGCCACCGG+TGG | + | Chr4:82362195-82362214 | MsG0480023227.01.T01:CDS | 80.0% |
| ! | ACCACTGCCGCCGCCACCGG+TGG | - | Chr4:82362211-82362230 | None:intergenic | 80.0% |
| ! | ACTGCCGCCGCCACCGGTGG+CGG | - | Chr4:82362208-82362227 | None:intergenic | 80.0% |
| ! | GCCGCCAACACCGTCGGCGG+CGG | + | Chr4:82362290-82362309 | MsG0480023227.01.T01:CDS | 80.0% |
| ! | GACCGCGCCGCCACCGGTGG+CGG | + | Chr4:82362198-82362217 | MsG0480023227.01.T01:CDS | 85.0% |
| !! | GCCACCGGTGGCGGCGGCAG+TGG | + | Chr4:82362207-82362226 | MsG0480023227.01.T01:CDS | 85.0% |
| !! | CGCCGCCACCGGTGGCGGCG+CGG | - | Chr4:82362222-82362203 | None:intergenic | 90.0% |
| !! | CGCGCCGCCACCGGTGGCGG+CGG | + | Chr4:82362201-82362220 | MsG0480023227.01.T01:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 82362183 | 82364243 | 82362183 | ID=MsG0480023227.01;Name=MsG0480023227.01 |
| Chr4 | mRNA | 82362183 | 82364243 | 82362183 | ID=MsG0480023227.01.T01;Parent=MsG0480023227.01;Name=MsG0480023227.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|686 |
| Chr4 | exon | 82362183 | 82364243 | 82362183 | ID=MsG0480023227.01.T01:exon:2450;Parent=MsG0480023227.01.T01 |
| Chr4 | CDS | 82362183 | 82364243 | 82362183 | ID=MsG0480023227.01.T01:cds;Parent=MsG0480023227.01.T01 |
| Gene Sequence |
| Protein sequence |
