AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007896.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007896.01.T01 MTR_2g034900 85.106 282 29 2 74 355 262 530 7.99e-171 486
MsG0280007896.01.T01 MTR_2g034900 44.939 247 105 5 1 226 1 237 1.36e-53 185
MsG0280007896.01.T01 MTR_1g083810 73.759 282 60 3 74 354 263 531 3.10e-147 426
MsG0280007896.01.T01 MTR_1g083810 39.592 245 122 8 1 226 1 238 1.85e-38 144
MsG0280007896.01.T01 MTR_7g112350 71.277 282 67 3 74 354 263 531 1.47e-137 402
MsG0280007896.01.T01 MTR_7g112350 37.273 330 127 10 1 266 1 314 1.34e-44 160
MsG0280007896.01.T01 MTR_8g027585 71.174 281 68 2 74 354 178 445 1.69e-137 399
MsG0280007896.01.T01 MTR_4g131510 75.294 255 50 2 74 328 185 426 2.44e-134 390
MsG0280007896.01.T01 MTR_4g131510 37.383 214 111 5 57 266 42 236 2.17e-27 112
MsG0280007896.01.T01 MTR_4g121435 65.603 282 78 5 74 354 265 528 6.41e-121 359
MsG0280007896.01.T01 MTR_4g121435 37.238 239 114 6 4 221 12 235 4.07e-38 143
MsG0280007896.01.T01 MTR_4g133040 68.321 262 68 3 74 335 196 442 2.83e-118 351
MsG0280007896.01.T01 MTR_4g133040 30.450 289 157 8 39 314 22 279 3.54e-23 100
MsG0280007896.01.T01 MTR_4g127570 70.229 262 64 4 75 335 113 361 4.78e-115 341
MsG0280007896.01.T01 MTR_4g133030 69.498 259 65 3 74 331 182 427 9.18e-112 335
MsG0280007896.01.T01 MTR_4g132980 75.701 214 48 1 117 330 62 271 1.55e-110 326
MsG0280007896.01.T01 MTR_4g132980 75.701 214 48 1 117 330 190 399 7.87e-109 326
MsG0280007896.01.T01 MTR_4g131000 62.887 291 58 4 74 328 184 460 6.77e-106 318
MsG0280007896.01.T01 MTR_1g053470 50.909 330 117 9 44 354 11 314 9.62e-93 280
MsG0280007896.01.T01 MTR_1g053470 53.465 303 110 7 44 328 11 300 3.71e-92 278
MsG0280007896.01.T01 MTR_4g013265 54.369 309 110 9 57 354 33 321 7.14e-92 278
MsG0280007896.01.T01 MTR_1g053470 53.465 303 110 7 44 328 11 300 6.48e-91 277
MsG0280007896.01.T01 MTR_4g132960 69.898 196 38 2 138 333 3 177 6.87e-83 251
MsG0280007896.01.T01 MTR_4g132967 62.755 196 35 2 138 333 7 164 9.21e-68 212
MsG0280007896.01.T01 MTR_7g112150 47.280 239 110 5 85 323 294 516 3.29e-59 199
MsG0280007896.01.T01 MTR_7g112150 25.524 286 176 12 1 255 1 280 1.87e-13 71.6
MsG0280007896.01.T01 MTR_7g112150 30.000 220 139 4 58 275 137 343 2.95e-13 71.2
MsG0280007896.01.T01 MTR_4g124270 52.349 149 37 2 53 201 8 122 2.21e-39 137
MsG0280007896.01.T01 MTR_7g112160 39.749 239 110 6 85 323 294 498 2.21e-37 140
MsG0280007896.01.T01 MTR_7g112160 37.097 124 67 3 58 179 137 251 7.32e-14 72.8
MsG0280007896.01.T01 MTR_1g066760 27.170 265 163 6 70 323 269 514 9.31e-25 105
MsG0280007896.01.T01 MTR_7g113400 43.382 136 66 3 86 221 294 418 1.64e-23 100
MsG0280007896.01.T01 MTR_7g113400 28.807 243 115 5 57 255 136 364 2.76e-12 67.8
MsG0280007896.01.T01 MTR_7g113402 47.253 91 33 3 244 332 22 99 8.52e-14 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007896.01.T01 AT3G06720 73.239 284 60 5 74 354 261 531 5.16e-143 416
MsG0280007896.01.T01 AT3G06720 38.776 245 112 7 1 221 1 231 2.76e-41 152
MsG0280007896.01.T01 AT3G06720 73.239 284 60 5 74 354 261 531 5.16e-143 416
MsG0280007896.01.T01 AT3G06720 38.776 245 112 7 1 221 1 231 2.76e-41 152
MsG0280007896.01.T01 AT4G16143 73.050 282 62 4 74 354 266 534 9.88e-139 405
MsG0280007896.01.T01 AT4G16143 42.400 250 111 8 1 226 1 241 1.78e-46 166
MsG0280007896.01.T01 AT4G16143 73.050 282 62 4 74 354 266 534 9.88e-139 405
MsG0280007896.01.T01 AT4G16143 42.400 250 111 8 1 226 1 241 1.78e-46 166
MsG0280007896.01.T01 AT1G02690 59.621 317 106 4 48 355 236 539 6.43e-124 367
MsG0280007896.01.T01 AT1G02690 38.182 220 101 7 1 217 1 188 1.84e-33 130
MsG0280007896.01.T01 AT1G02690 63.415 287 87 3 74 355 265 538 6.51e-124 367
MsG0280007896.01.T01 AT1G02690 38.182 220 101 7 1 217 1 188 1.81e-33 130
MsG0280007896.01.T01 AT1G09270 65.263 285 82 5 74 355 186 456 1.22e-119 353
MsG0280007896.01.T01 AT1G09270 65.263 285 82 5 74 355 268 538 1.99e-119 355
MsG0280007896.01.T01 AT1G09270 34.137 249 125 7 1 221 1 238 5.05e-34 132
MsG0280007896.01.T01 AT1G09270 65.263 285 82 5 74 355 268 538 1.99e-119 355
MsG0280007896.01.T01 AT1G09270 34.137 249 125 7 1 221 1 238 5.05e-34 132
MsG0280007896.01.T01 AT4G02150 61.702 282 92 4 74 354 264 530 4.06e-114 342
MsG0280007896.01.T01 AT4G02150 34.568 243 128 6 1 221 1 234 2.35e-31 124
MsG0280007896.01.T01 AT5G49310 57.299 274 95 6 73 340 258 515 2.51e-93 288
MsG0280007896.01.T01 AT5G49310 34.127 252 138 6 1 234 1 242 5.46e-32 126
MsG0280007896.01.T01 AT5G49310 33.333 225 109 5 57 247 116 333 2.19e-24 104
MsG0280007896.01.T01 AT3G05720 54.150 253 96 3 76 321 251 490 5.52e-83 261
MsG0280007896.01.T01 AT3G05720 35.390 308 131 7 11 266 9 300 1.35e-36 139
MsG0280007896.01.T01 AT3G05720 54.150 253 96 3 76 321 251 490 5.52e-83 261
MsG0280007896.01.T01 AT3G05720 35.390 308 131 7 11 266 9 300 1.35e-36 139
MsG0280007896.01.T01 AT5G52000 49.194 248 109 4 75 321 190 421 4.88e-69 223
MsG0280007896.01.T01 AT4G02150 60.403 149 50 1 74 222 264 403 3.62e-55 186
MsG0280007896.01.T01 AT4G02150 34.979 243 127 7 1 221 1 234 1.25e-31 123
MsG0280007896.01.T01 AT1G32880 56.291 151 57 4 183 331 40 183 1.22e-49 165
MsG0280007896.01.T01 AT5G49305 48.515 202 95 5 130 330 189 382 2.04e-49 170
MsG0280007896.01.T01 AT5G49305 48.515 202 95 5 130 330 189 382 2.04e-49 170
MsG0280007896.01.T01 AT5G49305 48.515 202 95 5 130 330 189 382 2.04e-49 170
MsG0280007896.01.T01 AT5G49305 48.515 202 95 5 130 330 189 382 2.04e-49 170
MsG0280007896.01.T01 AT5G49305 48.515 202 95 5 130 330 189 382 2.04e-49 170
MsG0280007896.01.T01 AT5G03070 25.094 267 166 6 70 323 269 514 8.93e-19 87.8

Find 96 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTCTCAATCGGAAATT+AGG 0.091826 2:+22665155 MsG0280007896.01.T01:five_prime_UTR
GAGCGACATCGTTTCGAATT+AGG 0.152846 2:-22665237 None:intergenic
TTCCTCCATTGTTGAGAAAA+AGG 0.222437 2:+22665445 MsG0280007896.01.T01:CDS
AGCGACATCGTTTCGAATTA+GGG 0.266727 2:-22665236 None:intergenic
TTAAAATTCTTGAGACATAT+TGG 0.290602 2:+22669036 MsG0280007896.01.T01:CDS
AGACAGACGGTAACAATTCT+TGG 0.292280 2:-22668852 None:intergenic
TAATTCTCAATCGGAAATTA+GGG 0.303459 2:+22665156 MsG0280007896.01.T01:five_prime_UTR
TCGAAGATGAAAATGCGATT+TGG 0.328364 2:-22665196 None:intergenic
CGAAGATGAAAATGCGATTT+GGG 0.337338 2:-22665195 None:intergenic
TCTTGTGATTATGGGTCAAC+AGG 0.349313 2:-22668002 None:intergenic
CTTAGTATTCTCAGAAGTTC+CGG 0.363293 2:-22666039 None:intergenic
CTAAGTAGCTTCACAAATAT+CGG 0.376675 2:-22666086 None:intergenic
CGAACTTCGGTTCTTGCATT+GGG 0.377205 2:-22665263 None:intergenic
TGTTTAGTTTGAGGCTGCTT+GGG 0.385395 2:+22665998 MsG0280007896.01.T01:intron
GATAGATGAGGCTGAGGGAT+TGG 0.388407 2:+22668959 MsG0280007896.01.T01:CDS
TACAAGGTACTTGGTGAGCC+AGG 0.395402 2:+22668788 MsG0280007896.01.T01:CDS
CATTGTTGTCATGACTCTGC+AGG 0.398737 2:-22668995 None:intergenic
ACGAACTTCGGTTCTTGCAT+TGG 0.399588 2:-22665264 None:intergenic
GTATTAAGAAAGAAGCTTGC+TGG 0.403332 2:+22668028 MsG0280007896.01.T01:CDS
GTTCACAAGTGATGATGTTC+GGG 0.403934 2:+22666108 MsG0280007896.01.T01:CDS
AGTTCACAAGTGATGATGTT+CGG 0.408997 2:+22666107 MsG0280007896.01.T01:CDS
AGCCGGACTGATTGCTCCTC+TGG 0.418448 2:+22668578 MsG0280007896.01.T01:CDS
TTTCCCACCGTGCGAAGTGC+AGG 0.425467 2:-22666772 None:intergenic
TTGTTTAGTTTGAGGCTGCT+TGG 0.428269 2:+22665997 MsG0280007896.01.T01:intron
TGTCAGGCTATTATTGGTCA+TGG 0.429466 2:+22667958 MsG0280007896.01.T01:intron
GGAGAAGCAGAGAAAAGCTT+TGG 0.434883 2:+22668903 MsG0280007896.01.T01:CDS
ACGGTAACAATTCTTGGATC+GGG 0.454150 2:-22668846 None:intergenic
GTAACGGTTGCGACGAACTT+CGG 0.460293 2:-22665276 None:intergenic
ACTAAGGTGGTAATTGATCA+TGG 0.461341 2:+22666056 MsG0280007896.01.T01:CDS
AATGACCTTCCGGTCCCATC+TGG 0.465197 2:+22669125 MsG0280007896.01.T01:CDS
TCTCTCTCTTAATTCTCAAT+CGG 0.480800 2:+22665147 MsG0280007896.01.T01:five_prime_UTR
GCACTCTCCAATGCTACATC+TGG 0.481318 2:+22668651 MsG0280007896.01.T01:CDS
AAGTGATGATGTTCGGGAGC+AGG 0.481412 2:+22666114 MsG0280007896.01.T01:CDS
AGTTCGTCGCAACCGTTACA+AGG 0.482319 2:+22665280 MsG0280007896.01.T01:CDS
AATTCTTGAGACATATTGGT+TGG 0.486170 2:+22669040 MsG0280007896.01.T01:CDS
GCGACCTTCGTCGGCGTCGA+CGG 0.488941 2:-22665306 None:intergenic
CCAGGCGATGGTTCTCAACC+TGG 0.495510 2:+22669086 MsG0280007896.01.T01:CDS
CCATCTGGTGGATTTAACTT+CGG 0.506669 2:+22669140 MsG0280007896.01.T01:CDS
ACGGTGGGAAATATTGTAAC+GGG 0.515526 2:+22666784 MsG0280007896.01.T01:CDS
GACCTTCCGGTCCCATCTGG+TGG 0.518360 2:+22669128 MsG0280007896.01.T01:CDS
TGGAAACAAAGAGCAGATAC+AGG 0.519637 2:+22668071 MsG0280007896.01.T01:CDS
ACTATATCAAACATTACAGC+TGG 0.520999 2:+22668051 MsG0280007896.01.T01:CDS
CATCGTTTCGAATTAGGGCT+AGG 0.523726 2:-22665231 None:intergenic
GACGGTAACAATTCTTGGAT+CGG 0.531873 2:-22668847 None:intergenic
CTAAGGTGGTAATTGATCAT+GGG 0.534361 2:+22666057 MsG0280007896.01.T01:CDS
TCAGATGATAGATGAGGCTG+AGG 0.537362 2:+22668953 MsG0280007896.01.T01:CDS
CGGAACTTCTGAGAATACTA+AGG 0.537666 2:+22666040 MsG0280007896.01.T01:CDS
ATGTAGGCTGTTATTGAAGC+CGG 0.538904 2:+22668561 MsG0280007896.01.T01:intron
ATTGTTACCGTCTGTCTAGA+AGG 0.541249 2:+22668858 MsG0280007896.01.T01:CDS
CCATGTTATCCTCTCTTCTC+CGG 0.544238 2:-22665328 None:intergenic
GGGATCAGTACTGAAGGAGA+TGG 0.544723 2:-22666751 None:intergenic
ATCCCTGCACTTCGCACGGT+GGG 0.546677 2:+22666769 MsG0280007896.01.T01:CDS
GGGAGATGATGCGCAGACTC+AGG 0.546817 2:+22666804 MsG0280007896.01.T01:CDS
GACCAGAGGAGCAATCAGTC+CGG 0.553350 2:-22668580 None:intergenic
TCGACGCCGACGAAGGTCGC+CGG 0.556503 2:+22665309 MsG0280007896.01.T01:CDS
GTCAACAGGCTCAAAAGACA+TGG 0.559325 2:-22667988 None:intergenic
ACAAGGTACTTGGTGAGCCA+GGG 0.559926 2:+22668789 MsG0280007896.01.T01:CDS
TCTTCTCCGGCGACCTTCGT+CGG 0.566497 2:-22665315 None:intergenic
CCAGGTTGAGAACCATCGCC+TGG 0.572971 2:-22669086 None:intergenic
CAACAATGAAATTTATGAGA+AGG 0.576333 2:+22669010 MsG0280007896.01.T01:CDS
CTCAAGACCTTCTAGACAGA+CGG 0.579113 2:-22668865 None:intergenic
GCTCTTACAAACATAGCATC+CGG 0.584215 2:+22666020 MsG0280007896.01.T01:CDS
CTCTTGAAGAAACGTCGTGA+AGG 0.587356 2:+22665383 MsG0280007896.01.T01:CDS
TTAAATCCACCAGATGGGAC+CGG 0.591642 2:-22669134 None:intergenic
GGTACCGCCAGATGTAGCAT+TGG 0.592074 2:-22668658 None:intergenic
CGAAGGTCGCCGGAGAAGAG+AGG 0.592800 2:+22665319 MsG0280007896.01.T01:CDS
GAGAAAAGCTTTGGTAACGC+GGG 0.594515 2:+22668912 MsG0280007896.01.T01:CDS
CCGAAGTTAAATCCACCAGA+TGG 0.595364 2:-22669140 None:intergenic
ACTGATCCCTGCACTTCGCA+CGG 0.599265 2:+22666765 MsG0280007896.01.T01:CDS
CACGGTGGGAAATATTGTAA+CGG 0.599546 2:+22666783 MsG0280007896.01.T01:CDS
TTCCCACCGTGCGAAGTGCA+GGG 0.602360 2:-22666771 None:intergenic
CGTCGACGGCAACCTTGTAA+CGG 0.602526 2:-22665292 None:intergenic
GGATCAGTACTGAAGGAGAT+GGG 0.607387 2:-22666750 None:intergenic
ATCCACCAGATGGGACCGGA+AGG 0.609092 2:-22669130 None:intergenic
ACAGAGGCTTAATGCAACCC+TGG 0.616878 2:-22668806 None:intergenic
TAAGGTGGTAATTGATCATG+GGG 0.620054 2:+22666058 MsG0280007896.01.T01:CDS
TTGCCTCCAAAATTAAAACC+AGG 0.621885 2:-22669104 None:intergenic
CTCTCCAATGCTACATCTGG+CGG 0.629473 2:+22668654 MsG0280007896.01.T01:CDS
CGAAGTTAAATCCACCAGAT+GGG 0.629888 2:-22669139 None:intergenic
AGTGCAGGGATCAGTACTGA+AGG 0.630936 2:-22666757 None:intergenic
AGAGAAAAGCTTTGGTAACG+CGG 0.631578 2:+22668911 MsG0280007896.01.T01:CDS
GTTGCCGTCGACGCCGACGA+AGG 0.635885 2:+22665302 MsG0280007896.01.T01:CDS
CCGGAGAAGAGAGGATAACA+TGG 0.641054 2:+22665328 MsG0280007896.01.T01:CDS
CGGTAACAATTCTTGGATCG+GGG 0.651650 2:-22668845 None:intergenic
CGTTTCGAATTAGGGCTAGG+TGG 0.654629 2:-22665228 None:intergenic
AACTTCTGAGAATACTAAGG+TGG 0.670449 2:+22666043 MsG0280007896.01.T01:CDS
GAGACACTACCACCAGGCGA+TGG 0.678997 2:+22669074 MsG0280007896.01.T01:CDS
CAGATGATAGATGAGGCTGA+GGG 0.681344 2:+22668954 MsG0280007896.01.T01:CDS
TCAACAGGCTCAAAAGACAT+GGG 0.682804 2:-22667987 None:intergenic
GTATGCTCAGATGATAGATG+AGG 0.690490 2:+22668947 MsG0280007896.01.T01:CDS
GATCCCTGCACTTCGCACGG+TGG 0.694785 2:+22666768 MsG0280007896.01.T01:CDS
GACGACGAGACACTACCACC+AGG 0.699781 2:+22669068 MsG0280007896.01.T01:CDS
ACAATGGAGGAAGATTGAAG+AGG 0.704929 2:-22665434 None:intergenic
GGTTGAGAACCATCGCCTGG+TGG 0.713046 2:-22669083 None:intergenic
TGAAGAGGAGTAGCAAACTG+CGG 0.741605 2:-22665419 None:intergenic
CAAACAAGAAGATCACACAG+AGG 0.829322 2:-22668822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGGTTTTAAAAAAAAAACAA+GGG + Chr2:22667146-22667165 MsG0280007896.01.T01:intron 15.0%
!!! TTAGGTTTTTTTTTGTTAAT+TGG + Chr2:22665556-22665575 MsG0280007896.01.T01:intron 15.0%
!!! TTGGTTTTAAAAAAAAAACA+AGG + Chr2:22667145-22667164 MsG0280007896.01.T01:intron 15.0%
!!! TTGTTTTTTTTTTAAAACCA+AGG - Chr2:22667146-22667165 None:intergenic 15.0%
!!! TTTGAATTTTGATATTATGT+TGG + Chr2:22667431-22667450 MsG0280007896.01.T01:intron 15.0%
!!! TTTTTTTTTTAAGAAAAGAC+AGG + Chr2:22668384-22668403 MsG0280007896.01.T01:intron 15.0%
!! AATTGAGTTATCATAAACAT+GGG - Chr2:22668109-22668128 None:intergenic 20.0%
!! ATAATTTATTTACCACAGAA+TGG - Chr2:22668335-22668354 None:intergenic 20.0%
!! ATTGATGTATGTAATTGAAA+TGG - Chr2:22668417-22668436 None:intergenic 20.0%
!! GATTATCTAATATAAAGCAA+CGG - Chr2:22667318-22667337 None:intergenic 20.0%
!! TAAAACCTTTCATAAGATTT+AGG + Chr2:22667516-22667535 MsG0280007896.01.T01:intron 20.0%
!! TAATTGAGTTATCATAAACA+TGG - Chr2:22668110-22668129 None:intergenic 20.0%
!! TACCTTGTAACAAAAATATT+TGG - Chr2:22668777-22668796 None:intergenic 20.0%
!! TATTTCATAGTAGTTAATAG+CGG - Chr2:22667737-22667756 None:intergenic 20.0%
!! TGTTAATTGGTTAGAAAAAA+CGG + Chr2:22665569-22665588 MsG0280007896.01.T01:intron 20.0%
!! TTAAAATTCTTGAGACATAT+TGG + Chr2:22669036-22669055 MsG0280007896.01.T01:CDS 20.0%
!!! AATACTTTTCTTGTGATTAT+GGG - Chr2:22668013-22668032 None:intergenic 20.0%
!!! AATTATCAGTTCTTTTCTTT+AGG + Chr2:22667379-22667398 MsG0280007896.01.T01:intron 20.0%
!!! AATTGAAGTACTTTAATTAG+TGG + Chr2:22666903-22666922 MsG0280007896.01.T01:intron 20.0%
!!! AATTTATATGCATGTTTTGT+AGG + Chr2:22666725-22666744 MsG0280007896.01.T01:intron 20.0%
!!! ACTAATTAAAGTACTTCAAT+TGG - Chr2:22666904-22666923 None:intergenic 20.0%
!!! ATTGTTGTTTGAATTTTGAT+TGG + Chr2:22665951-22665970 MsG0280007896.01.T01:intron 20.0%
!!! CTTTTGTGTATTAATGATAA+TGG + Chr2:22666456-22666475 MsG0280007896.01.T01:intron 20.0%
!!! GGATTTAATGTTTTGAATTT+TGG + Chr2:22667400-22667419 MsG0280007896.01.T01:intron 20.0%
!!! TAATACTTTTCTTGTGATTA+TGG - Chr2:22668014-22668033 None:intergenic 20.0%
!!! TACCAAATATTTTTGTTACA+AGG + Chr2:22668772-22668791 MsG0280007896.01.T01:CDS 20.0%
!!! TATTCAAGTTTGATGTTTTT+GGG + Chr2:22668186-22668205 MsG0280007896.01.T01:intron 20.0%
!!! TTATTCAAGTTTGATGTTTT+TGG + Chr2:22668185-22668204 MsG0280007896.01.T01:intron 20.0%
!!! TTTCGTAATGTTTTGAATTT+TGG + Chr2:22667466-22667485 MsG0280007896.01.T01:intron 20.0%
! AAAATCAGATAAACTCTCAA+AGG - Chr2:22667924-22667943 None:intergenic 25.0%
! AAATCAGATAAACTCTCAAA+GGG - Chr2:22667923-22667942 None:intergenic 25.0%
! ATATATCTACAAGACTACAA+TGG - Chr2:22668252-22668271 None:intergenic 25.0%
! CAACAATGAAATTTATGAGA+AGG + Chr2:22669010-22669029 MsG0280007896.01.T01:CDS 25.0%
! CTTGTGAATTGTTTAACAAT+TGG + Chr2:22666841-22666860 MsG0280007896.01.T01:intron 25.0%
! GTGGTAAATAAATTATCGAA+GGG + Chr2:22668339-22668358 MsG0280007896.01.T01:intron 25.0%
! TAATTCTCAATCGGAAATTA+GGG + Chr2:22665156-22665175 MsG0280007896.01.T01:five_prime_UTR 25.0%
! TCCTAAAAGTTATGAAATAG+CGG + Chr2:22667650-22667669 MsG0280007896.01.T01:intron 25.0%
! TGTGGTAAATAAATTATCGA+AGG + Chr2:22668338-22668357 MsG0280007896.01.T01:intron 25.0%
! TTAATTCTCAATCGGAAATT+AGG + Chr2:22665155-22665174 MsG0280007896.01.T01:five_prime_UTR 25.0%
! TTTCACGTAAAATGAAATAG+CGG - Chr2:22667111-22667130 None:intergenic 25.0%
!! AATTACCTTTTTCTCAACAA+TGG - Chr2:22665453-22665472 None:intergenic 25.0%
!! AGAGTTTATCTGATTTTGTT+GGG + Chr2:22667927-22667946 MsG0280007896.01.T01:intron 25.0%
!! TATATAATGTTTGTTGCAGT+TGG + Chr2:22665606-22665625 MsG0280007896.01.T01:intron 25.0%
!!! CTTGAGAATATTTTGAAGAT+TGG + Chr2:22668882-22668901 MsG0280007896.01.T01:CDS 25.0%
!!! GTAATTTTGATCGTTGATTT+GGG + Chr2:22665467-22665486 MsG0280007896.01.T01:intron 25.0%
!!! TAATGATAATGGATCTTTGA+TGG + Chr2:22666467-22666486 MsG0280007896.01.T01:intron 25.0%
!!! TATTTTTGTTACAAGGTACT+TGG + Chr2:22668779-22668798 MsG0280007896.01.T01:CDS 25.0%
!!! TCTGTGTTTTGATTTGAATT+GGG + Chr2:22665518-22665537 MsG0280007896.01.T01:intron 25.0%
!!! TTCTGTGTTTTGATTTGAAT+TGG + Chr2:22665517-22665536 MsG0280007896.01.T01:intron 25.0%
!!! TTTGTTGTTTGTTTAGTTTG+AGG + Chr2:22665989-22666008 MsG0280007896.01.T01:intron 25.0%
AAATTTCAAACCTGAAGTTG+GGG - Chr2:22665893-22665912 None:intergenic 30.0%
AACAATTACTGTGTATAACC+TGG - Chr2:22668282-22668301 None:intergenic 30.0%
AACCACCTAAATCTTATGAA+AGG - Chr2:22667524-22667543 None:intergenic 30.0%
AACCTTTCATAAGATTTAGG+TGG + Chr2:22667519-22667538 MsG0280007896.01.T01:intron 30.0%
AACGCATTTCTCTCAAAAAA+CGG + Chr2:22667259-22667278 MsG0280007896.01.T01:intron 30.0%
AATCAGATAAACTCTCAAAG+GGG - Chr2:22667922-22667941 None:intergenic 30.0%
AATTCTTGAGACATATTGGT+TGG + Chr2:22669040-22669059 MsG0280007896.01.T01:CDS 30.0%
ACAAATTTCAAACCTGAAGT+TGG - Chr2:22665895-22665914 None:intergenic 30.0%
ACAATTACTGTGTATAACCT+GGG - Chr2:22668281-22668300 None:intergenic 30.0%
ACAGTAATTGTTGGATTGTT+AGG + Chr2:22668290-22668309 MsG0280007896.01.T01:intron 30.0%
ACATTAAAAAAGAAGCTGCA+TGG + Chr2:22668628-22668647 MsG0280007896.01.T01:CDS 30.0%
ACTATATCAAACATTACAGC+TGG + Chr2:22668051-22668070 MsG0280007896.01.T01:CDS 30.0%
AGAGAGAAACTGAAGTTATT+AGG - Chr2:22667195-22667214 None:intergenic 30.0%
AGGTTATACACAGTAATTGT+TGG + Chr2:22668281-22668300 MsG0280007896.01.T01:intron 30.0%
ATCAAATGACAAAATCCAAG+CGG + Chr2:22666591-22666610 MsG0280007896.01.T01:intron 30.0%
ATCATAAACATGGGATTTAC+AGG - Chr2:22668100-22668119 None:intergenic 30.0%
ATCATAACTGAACATGCAAA+CGG + Chr2:22666428-22666447 MsG0280007896.01.T01:intron 30.0%
ATTCCAACATAACATAGCAT+TGG - Chr2:22667362-22667381 None:intergenic 30.0%
ATTGAGGAAGTTATTCAATC+CGG + Chr2:22665825-22665844 MsG0280007896.01.T01:intron 30.0%
CAAATTTCAAACCTGAAGTT+GGG - Chr2:22665894-22665913 None:intergenic 30.0%
CATTAAAAAAGAAGCTGCAT+GGG + Chr2:22668629-22668648 MsG0280007896.01.T01:CDS 30.0%
CTAAGTAGCTTCACAAATAT+CGG - Chr2:22666089-22666108 None:intergenic 30.0%
CTTCCTTCTTTCATTCTTTA+CGG + Chr2:22667213-22667232 MsG0280007896.01.T01:intron 30.0%
GAACCATTTATGTATGATGT+AGG + Chr2:22668545-22668564 MsG0280007896.01.T01:intron 30.0%
GAAGAATCATTACTCACAAA+AGG - Chr2:22666654-22666673 None:intergenic 30.0%
GAGAGAAACTGAAGTTATTA+GGG - Chr2:22667194-22667213 None:intergenic 30.0%
GATTGAATAACTTCCTCAAT+CGG - Chr2:22665825-22665844 None:intergenic 30.0%
TAAAGCAGAGTAGTTAATAG+CGG + Chr2:22666962-22666981 MsG0280007896.01.T01:intron 30.0%
TACCACAGAATGGTAAATAA+GGG - Chr2:22668325-22668344 None:intergenic 30.0%
TATCTAATATAAAGCAACGG+CGG - Chr2:22667315-22667334 None:intergenic 30.0%
TCTCTCTCTTAATTCTCAAT+CGG + Chr2:22665147-22665166 MsG0280007896.01.T01:five_prime_UTR 30.0%
TGAAAATAGAAGATTCTCCT+TGG + Chr2:22667126-22667145 MsG0280007896.01.T01:intron 30.0%
TTACCACAGAATGGTAAATA+AGG - Chr2:22668326-22668345 None:intergenic 30.0%
TTTCCAATGCTATGTTATGT+TGG + Chr2:22667356-22667375 MsG0280007896.01.T01:intron 30.0%
! GAGAGTTTATCTGATTTTGT+TGG + Chr2:22667926-22667945 MsG0280007896.01.T01:intron 30.0%
! TCTTTTTGTCAGGCTATTAT+TGG + Chr2:22667952-22667971 MsG0280007896.01.T01:intron 30.0%
! TGAATTTTTGCTGAACTATG+TGG + Chr2:22666169-22666188 MsG0280007896.01.T01:intron 30.0%
! TGTAGATATATTTAGTTCCC+AGG + Chr2:22668261-22668280 MsG0280007896.01.T01:intron 30.0%
!! ACCGCTATTTCATAACTTTT+AGG - Chr2:22667654-22667673 None:intergenic 30.0%
!! CGTAATGTTTTGAATTTTGG+TGG + Chr2:22667469-22667488 MsG0280007896.01.T01:intron 30.0%
!! GGTAATTTTGATCGTTGATT+TGG + Chr2:22665466-22665485 MsG0280007896.01.T01:intron 30.0%
!! GTTAGAAAAAACGGTTTTGA+CGG + Chr2:22665578-22665597 MsG0280007896.01.T01:intron 30.0%
!! TTTCTTCACGCTTACTTTTA+CGG - Chr2:22665361-22665380 None:intergenic 30.0%
!! TTTTTAAGAAAAGACAGGTG+TGG + Chr2:22668389-22668408 MsG0280007896.01.T01:intron 30.0%
!!! TCTCAACCTGGTTTTAATTT+TGG + Chr2:22669098-22669117 MsG0280007896.01.T01:CDS 30.0%
!!! TGCCATTTTGTTTTCTGTTT+GGG + Chr2:22668451-22668470 MsG0280007896.01.T01:intron 30.0%
!!! TTGCCATTTTGTTTTCTGTT+TGG + Chr2:22668450-22668469 MsG0280007896.01.T01:intron 30.0%
!!! TTGTGTTGGTAATTTTGTGT+GGG + Chr2:22667773-22667792 MsG0280007896.01.T01:intron 30.0%
ACCCCAAACAGAAAACAAAA+TGG - Chr2:22668456-22668475 None:intergenic 35.0%
ACTAAGGTGGTAATTGATCA+TGG + Chr2:22666056-22666075 MsG0280007896.01.T01:CDS 35.0%
AGACTCAGGTAATGTCATAA+TGG + Chr2:22666818-22666837 MsG0280007896.01.T01:intron 35.0%
CAATAACTGCAAAAGATCAC+TGG - Chr2:22666690-22666709 None:intergenic 35.0%
CACTGAAACTCTGTAATTGT+AGG + Chr2:22666200-22666219 MsG0280007896.01.T01:intron 35.0%
CAGCCTACATCATACATAAA+TGG - Chr2:22668551-22668570 None:intergenic 35.0%
CGAAGATGAAAATGCGATTT+GGG - Chr2:22665198-22665217 None:intergenic 35.0%
CTAAGGTGGTAATTGATCAT+GGG + Chr2:22666057-22666076 MsG0280007896.01.T01:CDS 35.0%
CTTAGTATTCTCAGAAGTTC+CGG - Chr2:22666042-22666061 None:intergenic 35.0%
GATTTCCATGTTAAACAGCA+TGG - Chr2:22668215-22668234 None:intergenic 35.0%
GCGAAAAGAAACTAGACTAA+TGG - Chr2:22667876-22667895 None:intergenic 35.0%
GTATTAAGAAAGAAGCTTGC+TGG + Chr2:22668028-22668047 MsG0280007896.01.T01:CDS 35.0%
TAAGGTGGTAATTGATCATG+GGG + Chr2:22666058-22666077 MsG0280007896.01.T01:CDS 35.0%
TCATAACTGAACATGCAAAC+GGG + Chr2:22666429-22666448 MsG0280007896.01.T01:intron 35.0%
TCGAAGATGAAAATGCGATT+TGG - Chr2:22665199-22665218 None:intergenic 35.0%
TTCCTCCATTGTTGAGAAAA+AGG + Chr2:22665445-22665464 MsG0280007896.01.T01:CDS 35.0%
TTGCCTCCAAAATTAAAACC+AGG - Chr2:22669107-22669126 None:intergenic 35.0%
! AACTTCTGAGAATACTAAGG+TGG + Chr2:22666043-22666062 MsG0280007896.01.T01:CDS 35.0%
! AGTTCACAAGTGATGATGTT+CGG + Chr2:22666107-22666126 MsG0280007896.01.T01:CDS 35.0%
! GCTGGAAACATTGAGATTTT+AGG + Chr2:22668741-22668760 MsG0280007896.01.T01:intron 35.0%
! GGAAACATTGAGATTTTAGG+TGG + Chr2:22668744-22668763 MsG0280007896.01.T01:intron 35.0%
! TACAATGGTTGTTATTGCAC+CGG - Chr2:22668237-22668256 None:intergenic 35.0%
! TACCTTTTTCTCAACAATGG+AGG - Chr2:22665450-22665469 None:intergenic 35.0%
! TATCCCGCTATAGCATTTTT+GGG + Chr2:22667689-22667708 MsG0280007896.01.T01:intron 35.0%
! TGCTGTTTAACATGGAAATC+CGG + Chr2:22668215-22668234 MsG0280007896.01.T01:intron 35.0%
! TTAGGTGGTTTGTAACTTTG+TGG + Chr2:22667534-22667553 MsG0280007896.01.T01:intron 35.0%
! TTTGAGAGAAATGCGTTTTG+AGG - Chr2:22667256-22667275 None:intergenic 35.0%
!! ATAATGGATCTTTGATGGAC+AGG + Chr2:22666472-22666491 MsG0280007896.01.T01:intron 35.0%
!! CACATACTTGATTTGCTCAT+GGG - Chr2:22668682-22668701 None:intergenic 35.0%
!! GCTTTGTTCAGTTTCTAGTT+AGG + Chr2:22665859-22665878 MsG0280007896.01.T01:intron 35.0%
!! GTACTGATTTAGTGTTGTGT+TGG + Chr2:22667759-22667778 MsG0280007896.01.T01:intron 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG - Chr2:22667730-22667749 None:intergenic 35.0%
!! TCACATACTTGATTTGCTCA+TGG - Chr2:22668683-22668702 None:intergenic 35.0%
!! TTGTTCAGTTTCTAGTTAGG+AGG + Chr2:22665862-22665881 MsG0280007896.01.T01:intron 35.0%
!! TTTTGAAGAAGATTGACCAG+AGG - Chr2:22668597-22668616 None:intergenic 35.0%
!!! CAACCTGGTTTTAATTTTGG+AGG + Chr2:22669101-22669120 MsG0280007896.01.T01:CDS 35.0%
!!! GATCGTTGATTTGGGATTTT+GGG + Chr2:22665475-22665494 MsG0280007896.01.T01:intron 35.0%
!!! GCCATTTTGTTTTCTGTTTG+GGG + Chr2:22668452-22668471 MsG0280007896.01.T01:intron 35.0%
!!! GGGTTTTGTTTTGTGATGTT+AGG + Chr2:22665538-22665557 MsG0280007896.01.T01:intron 35.0%
!!! GTTGTGTTGGTAATTTTGTG+TGG + Chr2:22667772-22667791 MsG0280007896.01.T01:intron 35.0%
!!! TGATCGTTGATTTGGGATTT+TGG + Chr2:22665474-22665493 MsG0280007896.01.T01:intron 35.0%
!!! TGTGTTGGTAATTTTGTGTG+GGG + Chr2:22667774-22667793 MsG0280007896.01.T01:intron 35.0%
!!! TTGATTTGGGATTTTGGGTT+TGG + Chr2:22665480-22665499 MsG0280007896.01.T01:intron 35.0%
!!! TTTTGAGGTGAGAAGATGAA+AGG - Chr2:22667241-22667260 None:intergenic 35.0%
AAAAACAAACGCTCAAGAGC+TGG - Chr2:22666512-22666531 None:intergenic 40.0%
ACAATGGAGGAAGATTGAAG+AGG - Chr2:22665437-22665456 None:intergenic 40.0%
ACAGCAACTACCTGATCAAA+TGG - Chr2:22666396-22666415 None:intergenic 40.0%
ACGGTAACAATTCTTGGATC+GGG - Chr2:22668849-22668868 None:intergenic 40.0%
ACGGTGGGAAATATTGTAAC+GGG + Chr2:22666784-22666803 MsG0280007896.01.T01:CDS 40.0%
ACTAGAAACTGAACAAAGCG+AGG - Chr2:22665858-22665877 None:intergenic 40.0%
AGACAGACGGTAACAATTCT+TGG - Chr2:22668855-22668874 None:intergenic 40.0%
AGCGACATCGTTTCGAATTA+GGG - Chr2:22665239-22665258 None:intergenic 40.0%
ATGTAGGCTGTTATTGAAGC+CGG + Chr2:22668561-22668580 MsG0280007896.01.T01:intron 40.0%
ATTCGGAAGCTTCTTTCGAT+TGG + Chr2:22665697-22665716 MsG0280007896.01.T01:intron 40.0%
ATTGTTACCGTCTGTCTAGA+AGG + Chr2:22668858-22668877 MsG0280007896.01.T01:CDS 40.0%
CAAACAAGAAGATCACACAG+AGG - Chr2:22668825-22668844 None:intergenic 40.0%
CACGGTGGGAAATATTGTAA+CGG + Chr2:22666783-22666802 MsG0280007896.01.T01:CDS 40.0%
CATGGCTAAGAACAAGATCA+CGG - Chr2:22666268-22666287 None:intergenic 40.0%
CGAAGTTAAATCCACCAGAT+GGG - Chr2:22669142-22669161 None:intergenic 40.0%
CTACCAATGAGTTATGCTCA+CGG + Chr2:22667826-22667845 MsG0280007896.01.T01:intron 40.0%
GAATAACTTCCTCAATCGGA+GGG - Chr2:22665821-22665840 None:intergenic 40.0%
GACGGTAACAATTCTTGGAT+CGG - Chr2:22668850-22668869 None:intergenic 40.0%
GCACTCTCTTATCTTTCTGA+TGG + Chr2:22666568-22666587 MsG0280007896.01.T01:intron 40.0%
GCTCTTACAAACATAGCATC+CGG + Chr2:22666020-22666039 MsG0280007896.01.T01:CDS 40.0%
GTATGCTCAGATGATAGATG+AGG + Chr2:22668947-22668966 MsG0280007896.01.T01:CDS 40.0%
GTGAGCATAACTCATTGGTA+GGG - Chr2:22667827-22667846 None:intergenic 40.0%
TACCAATGAGTTATGCTCAC+GGG + Chr2:22667827-22667846 MsG0280007896.01.T01:intron 40.0%
TAGGGACATCGCAATATGTA+GGG - Chr2:22667809-22667828 None:intergenic 40.0%
TCAACAGGCTCAAAAGACAT+GGG - Chr2:22667990-22668009 None:intergenic 40.0%
TCATTCAACTGGGTTAACAG+CGG - Chr2:22666302-22666321 None:intergenic 40.0%
TCTGTAATTGTAGGCTGTGT+GGG + Chr2:22666209-22666228 MsG0280007896.01.T01:intron 40.0%
TCTTGTGATTATGGGTCAAC+AGG - Chr2:22668005-22668024 None:intergenic 40.0%
TGAATAACTTCCTCAATCGG+AGG - Chr2:22665822-22665841 None:intergenic 40.0%
TGGAAACAAAGAGCAGATAC+AGG + Chr2:22668071-22668090 MsG0280007896.01.T01:CDS 40.0%
TGTCAGGCTATTATTGGTCA+TGG + Chr2:22667958-22667977 MsG0280007896.01.T01:intron 40.0%
! AGCCCTTATTTACCATTCTG+TGG + Chr2:22668320-22668339 MsG0280007896.01.T01:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + Chr2:22667690-22667709 MsG0280007896.01.T01:intron 40.0%
! CGGAACTTCTGAGAATACTA+AGG + Chr2:22666040-22666059 MsG0280007896.01.T01:CDS 40.0%
! CTATCCCGCTATAGCATTTT+TGG + Chr2:22667688-22667707 MsG0280007896.01.T01:intron 40.0%
! GGTATCCATGCTGTTTAACA+TGG + Chr2:22668207-22668226 MsG0280007896.01.T01:intron 40.0%
! GTTCACAAGTGATGATGTTC+GGG + Chr2:22666108-22666127 MsG0280007896.01.T01:CDS 40.0%
! TTGTTGGGACTCTTTTTGTC+AGG + Chr2:22667942-22667961 MsG0280007896.01.T01:intron 40.0%
!! AGAGAAAAGCTTTGGTAACG+CGG + Chr2:22668911-22668930 MsG0280007896.01.T01:CDS 40.0%
!! CCATCTGGTGGATTTAACTT+CGG + Chr2:22669140-22669159 MsG0280007896.01.T01:CDS 40.0%
!! TGTTTAGTTTGAGGCTGCTT+GGG + Chr2:22665998-22666017 MsG0280007896.01.T01:intron 40.0%
!! TTGTTTAGTTTGAGGCTGCT+TGG + Chr2:22665997-22666016 MsG0280007896.01.T01:intron 40.0%
!! TTTTTGACTCTGCTTCATGC+TGG + Chr2:22668723-22668742 MsG0280007896.01.T01:intron 40.0%
AAAACCGCTATGCAGTGTTG+CGG - Chr2:22667077-22667096 None:intergenic 45.0%
AACAAAGCGAGGAACAACAC+CGG - Chr2:22665847-22665866 None:intergenic 45.0%
ACCGAAGCAACTACGCAATT+CGG + Chr2:22665680-22665699 MsG0280007896.01.T01:intron 45.0%
ACCTGATCAAATGGAGGTTG+TGG - Chr2:22666387-22666406 None:intergenic 45.0%
ACGAACTTCGGTTCTTGCAT+TGG - Chr2:22665267-22665286 None:intergenic 45.0%
AGGGACATCGCAATATGTAG+GGG - Chr2:22667808-22667827 None:intergenic 45.0%
AGTTAATAGCGGCGCTATAG+CGG + Chr2:22666973-22666992 MsG0280007896.01.T01:intron 45.0%
AGTTGGAGAGTCTTCTGCAA+TGG + Chr2:22665623-22665642 MsG0280007896.01.T01:intron 45.0%
CAAAATCCAAGCGGTGATTG+AGG + Chr2:22666600-22666619 MsG0280007896.01.T01:intron 45.0%
CAGATGATAGATGAGGCTGA+GGG + Chr2:22668954-22668973 MsG0280007896.01.T01:CDS 45.0%
CATCGTTTCGAATTAGGGCT+AGG - Chr2:22665234-22665253 None:intergenic 45.0%
CATTCAACTGGGTTAACAGC+GGG - Chr2:22666301-22666320 None:intergenic 45.0%
CATTGTTGTCATGACTCTGC+AGG - Chr2:22668998-22669017 None:intergenic 45.0%
CCATGTTATCCTCTCTTCTC+CGG - Chr2:22665331-22665350 None:intergenic 45.0%
CCGAAGTTAAATCCACCAGA+TGG - Chr2:22669143-22669162 None:intergenic 45.0%
CGAACTTCGGTTCTTGCATT+GGG - Chr2:22665266-22665285 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG - Chr2:22667696-22667715 None:intergenic 45.0%
CGGTAACAATTCTTGGATCG+GGG - Chr2:22668848-22668867 None:intergenic 45.0%
CGTGAGCATAACTCATTGGT+AGG - Chr2:22667828-22667847 None:intergenic 45.0%
CGTGATCTTGTTCTTAGCCA+TGG + Chr2:22666266-22666285 MsG0280007896.01.T01:intron 45.0%
CTCAAGACCTTCTAGACAGA+CGG - Chr2:22668868-22668887 None:intergenic 45.0%
CTCTGTAATTGTAGGCTGTG+TGG + Chr2:22666208-22666227 MsG0280007896.01.T01:intron 45.0%
CTCTTGAAGAAACGTCGTGA+AGG + Chr2:22665383-22665402 MsG0280007896.01.T01:CDS 45.0%
CTTTGCCTGCTCATTCAACT+GGG - Chr2:22666312-22666331 None:intergenic 45.0%
GACCCCAAAAATGCTATAGC+GGG - Chr2:22667695-22667714 None:intergenic 45.0%
GACTCTGTCAAACTTTGCAG+GGG + Chr2:22666357-22666376 MsG0280007896.01.T01:intron 45.0%
GAGCGACATCGTTTCGAATT+AGG - Chr2:22665240-22665259 None:intergenic 45.0%
GCAACTACCTGATCAAATGG+AGG - Chr2:22666393-22666412 None:intergenic 45.0%
GCGCCGTAAAGAATGAAAGA+AGG - Chr2:22667219-22667238 None:intergenic 45.0%
GGACTCTGTCAAACTTTGCA+GGG + Chr2:22666356-22666375 MsG0280007896.01.T01:intron 45.0%
GGAGAAGCAGAGAAAAGCTT+TGG + Chr2:22668903-22668922 MsG0280007896.01.T01:CDS 45.0%
GTAGGGACATCGCAATATGT+AGG - Chr2:22667810-22667829 None:intergenic 45.0%
GTCAACAGGCTCAAAAGACA+TGG - Chr2:22667991-22668010 None:intergenic 45.0%
GTTAACCCAGTTGAATGAGC+AGG + Chr2:22666304-22666323 MsG0280007896.01.T01:intron 45.0%
TATCTCATAACGCTACGCCA+TGG - Chr2:22667039-22667058 None:intergenic 45.0%
TCAGATGATAGATGAGGCTG+AGG + Chr2:22668953-22668972 MsG0280007896.01.T01:CDS 45.0%
TCCGAATTGCGTAGTTGCTT+CGG - Chr2:22665684-22665703 None:intergenic 45.0%
TCTTCTGCAATGGTGTGGTT+GGG + Chr2:22665633-22665652 MsG0280007896.01.T01:intron 45.0%
TGAAGAGGAGTAGCAAACTG+CGG - Chr2:22665422-22665441 None:intergenic 45.0%
TGGACTCTGTCAAACTTTGC+AGG + Chr2:22666355-22666374 MsG0280007896.01.T01:intron 45.0%
TTAAATCCACCAGATGGGAC+CGG - Chr2:22669137-22669156 None:intergenic 45.0%
! GGATCAGTACTGAAGGAGAT+GGG - Chr2:22666753-22666772 None:intergenic 45.0%
! TAATTTTGTGTGGGGAACCC+CGG + Chr2:22667782-22667801 MsG0280007896.01.T01:intron 45.0%
!! GAGAAAAGCTTTGGTAACGC+GGG + Chr2:22668912-22668931 MsG0280007896.01.T01:CDS 45.0%
!! TTTTGGAGGCAATGACCTTC+CGG + Chr2:22669115-22669134 MsG0280007896.01.T01:CDS 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG + Chr2:22667694-22667713 MsG0280007896.01.T01:intron 45.0%
AAGTCCTGACAGATGCATGC+TGG + Chr2:22666545-22666564 MsG0280007896.01.T01:intron 50.0%
AATTGTAGGCTGTGTGGGCA+TGG + Chr2:22666214-22666233 MsG0280007896.01.T01:intron 50.0%
ACAGAGGCTTAATGCAACCC+TGG - Chr2:22668809-22668828 None:intergenic 50.0%
ACATCGCAATATGTAGGGGC+CGG - Chr2:22667804-22667823 None:intergenic 50.0%
ACGTTGCTGGTGATTCACCT+AGG + Chr2:22666240-22666259 MsG0280007896.01.T01:intron 50.0%
AGAACAAGATCACGGCACCT+AGG - Chr2:22666260-22666279 None:intergenic 50.0%
AGTCCTGACAGATGCATGCT+GGG + Chr2:22666546-22666565 MsG0280007896.01.T01:intron 50.0%
AGTTCGTCGCAACCGTTACA+AGG + Chr2:22665280-22665299 MsG0280007896.01.T01:CDS 50.0%
ATTGTAGGCTGTGTGGGCAT+GGG + Chr2:22666215-22666234 MsG0280007896.01.T01:intron 50.0%
CCGGAGAAGAGAGGATAACA+TGG + Chr2:22665328-22665347 MsG0280007896.01.T01:CDS 50.0%
CGCCATGGCTTATTGCATAG+CGG - Chr2:22667024-22667043 None:intergenic 50.0%
CGTTTCGAATTAGGGCTAGG+TGG - Chr2:22665231-22665250 None:intergenic 50.0%
CTCTCCAATGCTACATCTGG+CGG + Chr2:22668654-22668673 MsG0280007896.01.T01:CDS 50.0%
GAAATAGCGGTCATAGCGCT+AGG + Chr2:22667663-22667682 MsG0280007896.01.T01:intron 50.0%
GACCGCTATGCAATAAGCCA+TGG + Chr2:22667019-22667038 MsG0280007896.01.T01:intron 50.0%
GAGAGTCTTCTGCAATGGTG+TGG + Chr2:22665628-22665647 MsG0280007896.01.T01:intron 50.0%
GATAGATGAGGCTGAGGGAT+TGG + Chr2:22668959-22668978 MsG0280007896.01.T01:CDS 50.0%
GCACTCTCCAATGCTACATC+TGG + Chr2:22668651-22668670 MsG0280007896.01.T01:CDS 50.0%
GCCACAACCTCCATTTGATC+AGG + Chr2:22666383-22666402 MsG0280007896.01.T01:intron 50.0%
GCTTTGCCTGCTCATTCAAC+TGG - Chr2:22666313-22666332 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG + Chr2:22667040-22667059 MsG0280007896.01.T01:intron 50.0%
GTAACGGTTGCGACGAACTT+CGG - Chr2:22665279-22665298 None:intergenic 50.0%
GTCCCGTGAGCATAACTCAT+TGG - Chr2:22667832-22667851 None:intergenic 50.0%
GTCTTCTGCAATGGTGTGGT+TGG + Chr2:22665632-22665651 MsG0280007896.01.T01:intron 50.0%
GTGATTGAGGCAGGTGTATG+TGG + Chr2:22666613-22666632 MsG0280007896.01.T01:intron 50.0%
TCGATGCTGAGAAATGCACG+TGG + Chr2:22666335-22666354 MsG0280007896.01.T01:intron 50.0%
TGGCTTATTGCATAGCGGTC+CGG - Chr2:22667019-22667038 None:intergenic 50.0%
! AAAGCAACGGCGGCGTTTTA+CGG - Chr2:22667305-22667324 None:intergenic 50.0%
! AAGTGATGATGTTCGGGAGC+AGG + Chr2:22666114-22666133 MsG0280007896.01.T01:CDS 50.0%
! ACAAGGTACTTGGTGAGCCA+GGG + Chr2:22668789-22668808 MsG0280007896.01.T01:CDS 50.0%
! AGTGCAGGGATCAGTACTGA+AGG - Chr2:22666760-22666779 None:intergenic 50.0%
! ATGAGATAGCGGCGCAATAG+CGG + Chr2:22667051-22667070 MsG0280007896.01.T01:intron 50.0%
! GGAGGATTTTCCCCAACTTC+AGG + Chr2:22665880-22665899 MsG0280007896.01.T01:intron 50.0%
! GGATCTTTGATGGACAGGTG+AGG + Chr2:22666477-22666496 MsG0280007896.01.T01:intron 50.0%
! GGGATCAGTACTGAAGGAGA+TGG - Chr2:22666754-22666773 None:intergenic 50.0%
! TACAAGGTACTTGGTGAGCC+AGG + Chr2:22668788-22668807 MsG0280007896.01.T01:CDS 50.0%
!! AATGGTGTGGTTGGGTTGGT+CGG + Chr2:22665641-22665660 MsG0280007896.01.T01:intron 50.0%
AATGACCTTCCGGTCCCATC+TGG + Chr2:22669125-22669144 MsG0280007896.01.T01:CDS 55.0%
ACTGATCCCTGCACTTCGCA+CGG + Chr2:22666765-22666784 MsG0280007896.01.T01:CDS 55.0%
ACTGGGTTAACAGCGGGATC+AGG - Chr2:22666295-22666314 None:intergenic 55.0%
ATCCAAGCGGTGATTGAGGC+AGG + Chr2:22666604-22666623 MsG0280007896.01.T01:intron 55.0%
ATCGCAATATGTAGGGGCCG+GGG - Chr2:22667802-22667821 None:intergenic 55.0%
CATCGCAATATGTAGGGGCC+GGG - Chr2:22667803-22667822 None:intergenic 55.0%
CGTCGACGGCAACCTTGTAA+CGG - Chr2:22665295-22665314 None:intergenic 55.0%
CTGCAATGGTGTGGTTGGGT+TGG + Chr2:22665637-22665656 MsG0280007896.01.T01:intron 55.0%
CTGGGTTAACAGCGGGATCA+GGG - Chr2:22666294-22666313 None:intergenic 55.0%
GACCAGAGGAGCAATCAGTC+CGG - Chr2:22668583-22668602 None:intergenic 55.0%
GGTACCGCCAGATGTAGCAT+TGG - Chr2:22668661-22668680 None:intergenic 55.0%
AGAGCGAAGCCCTCCGATTG+AGG + Chr2:22665809-22665828 MsG0280007896.01.T01:intron 60.0%
AGCCGGACTGATTGCTCCTC+TGG + Chr2:22668578-22668597 MsG0280007896.01.T01:CDS 60.0%
ATCCACCAGATGGGACCGGA+AGG - Chr2:22669133-22669152 None:intergenic 60.0%
ATCCCTGCACTTCGCACGGT+GGG + Chr2:22666769-22666788 MsG0280007896.01.T01:CDS 60.0%
CACCTGCCTCAATCACCGCT+TGG - Chr2:22666609-22666628 None:intergenic 60.0%
CCAGGCGATGGTTCTCAACC+TGG + Chr2:22669086-22669105 MsG0280007896.01.T01:CDS 60.0%
GACGACGAGACACTACCACC+AGG + Chr2:22669068-22669087 MsG0280007896.01.T01:CDS 60.0%
GAGACACTACCACCAGGCGA+TGG + Chr2:22669074-22669093 MsG0280007896.01.T01:CDS 60.0%
GGCAGGTGTATGTGGCAGAC+TGG + Chr2:22666621-22666640 MsG0280007896.01.T01:intron 60.0%
GGGAGATGATGCGCAGACTC+AGG + Chr2:22666804-22666823 MsG0280007896.01.T01:CDS 60.0%
GGTTGAGAACCATCGCCTGG+TGG - Chr2:22669086-22669105 None:intergenic 60.0%
GTGCCCAGCATGCATCTGTC+AGG - Chr2:22666552-22666571 None:intergenic 60.0%
GTGGGCATGGGAAACGTTGC+TGG + Chr2:22666227-22666246 MsG0280007896.01.T01:intron 60.0%
TCTTCTCCGGCGACCTTCGT+CGG - Chr2:22665318-22665337 None:intergenic 60.0%
TTCCCACCGTGCGAAGTGCA+GGG - Chr2:22666774-22666793 None:intergenic 60.0%
TTTCCCACCGTGCGAAGTGC+AGG - Chr2:22666775-22666794 None:intergenic 60.0%
! CCAGGTTGAGAACCATCGCC+TGG - Chr2:22669089-22669108 None:intergenic 60.0%
! CGCTCAAGAGCTGGAAGTGC+TGG - Chr2:22666503-22666522 None:intergenic 60.0%
CGAAGGTCGCCGGAGAAGAG+AGG + Chr2:22665319-22665338 MsG0280007896.01.T01:CDS 65.0%
GACCTTCCGGTCCCATCTGG+TGG + Chr2:22669128-22669147 MsG0280007896.01.T01:CDS 65.0%
GATCCCTGCACTTCGCACGG+TGG + Chr2:22666768-22666787 MsG0280007896.01.T01:CDS 65.0%
GCGGCCGCAACACTGCATAG+CGG + Chr2:22667070-22667089 MsG0280007896.01.T01:intron 65.0%
! ACAGCGGGATCAGGGCACCA+TGG - Chr2:22666286-22666305 None:intergenic 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG - Chr2:22667720-22667739 None:intergenic 65.0%
GTTGCCGTCGACGCCGACGA+AGG + Chr2:22665302-22665321 MsG0280007896.01.T01:CDS 70.0%
TCGACGCCGACGAAGGTCGC+CGG + Chr2:22665309-22665328 MsG0280007896.01.T01:CDS 70.0%
! GCGACCTTCGTCGGCGTCGA+CGG - Chr2:22665309-22665328 None:intergenic 70.0%
GCTATAGCGGCCGCGCGGTG+CGG + Chr2:22666986-22667005 MsG0280007896.01.T01:intron 75.0%
! CGCGCGGTGCGGTGCGGTAC+CGG + Chr2:22666997-22667016 MsG0280007896.01.T01:intron 80.0%
! CGGTACCGCACCGCACCGCG+CGG - Chr2:22666999-22667018 None:intergenic 80.0%
! GCGGCGCTATAGCGGCCGCG+CGG + Chr2:22666981-22667000 MsG0280007896.01.T01:intron 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + Chr2:22666991-22667010 MsG0280007896.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr2 gene 22665136 22669166 22665136 ID=MsG0280007896.01;Name=MsG0280007896.01
Chr2 mRNA 22665136 22669166 22665136 ID=MsG0280007896.01.T01;Parent=MsG0280007896.01;Name=MsG0280007896.01.T01;_AED=0.38;_eAED=0.39;_QI=115|0.4|0.66|1|1|1|6|0|355
Chr2 exon 22665136 22665466 22665136 ID=MsG0280007896.01.T01:exon:40296;Parent=MsG0280007896.01.T01
Chr2 exon 22666005 22666135 22666005 ID=MsG0280007896.01.T01:exon:40297;Parent=MsG0280007896.01.T01
Chr2 exon 22666747 22666825 22666747 ID=MsG0280007896.01.T01:exon:40298;Parent=MsG0280007896.01.T01
Chr2 exon 22667964 22668092 22667964 ID=MsG0280007896.01.T01:exon:40299;Parent=MsG0280007896.01.T01
Chr2 exon 22668567 22668675 22668567 ID=MsG0280007896.01.T01:exon:40300;Parent=MsG0280007896.01.T01
Chr2 exon 22668763 22669166 22668763 ID=MsG0280007896.01.T01:exon:40301;Parent=MsG0280007896.01.T01
Chr2 five_prime_UTR 22665136 22665250 22665136 ID=MsG0280007896.01.T01:five_prime_utr;Parent=MsG0280007896.01.T01
Chr2 CDS 22665251 22665466 22665251 ID=MsG0280007896.01.T01:cds;Parent=MsG0280007896.01.T01
Chr2 CDS 22666005 22666135 22666005 ID=MsG0280007896.01.T01:cds;Parent=MsG0280007896.01.T01
Chr2 CDS 22666747 22666825 22666747 ID=MsG0280007896.01.T01:cds;Parent=MsG0280007896.01.T01
Chr2 CDS 22667964 22668092 22667964 ID=MsG0280007896.01.T01:cds;Parent=MsG0280007896.01.T01
Chr2 CDS 22668567 22668675 22668567 ID=MsG0280007896.01.T01:cds;Parent=MsG0280007896.01.T01
Chr2 CDS 22668763 22669166 22668763 ID=MsG0280007896.01.T01:cds;Parent=MsG0280007896.01.T01
Gene Sequence

>MsG0280007896.01.T01

ATGTCGCTCAGACCCAATGCAAGAACCGAAGTTCGTCGCAACCGTTACAAGGTTGCCGTCGACGCCGACGAAGGTCGCCGGAGAAGAGAGGATAACATGGTCGAGATCCGTAAAAGTAAGCGTGAAGAAAGTCTCTTGAAGAAACGTCGTGAAGGTCTTCAAAATCAACCGCAGTTTGCTACTCCTCTTCAATCTTCCTCCATTGTTGAGAAAAAGTTTGAGGCTGCTTGGGCTCTTACAAACATAGCATCCGGAACTTCTGAGAATACTAAGGTGGTAATTGATCATGGGGCAGTGCCGATATTTGTGAAGCTACTTAGTTCACAAGTGATGATGTTCGGGAGCAGGCACCCATCTCCTTCAGTACTGATCCCTGCACTTCGCACGGTGGGAAATATTGTAACGGGAGATGATGCGCAGACTCAGGCTATTATTGGTCATGGTTCACTCCCATGTCTTTTGAGCCTGTTGACCCATAATCACAAGAAAAGTATTAAGAAAGAAGCTTGCTGGACTATATCAAACATTACAGCTGGAAACAAAGAGCAGATACAGGCTGTTATTGAAGCCGGACTGATTGCTCCTCTGGTCAATCTTCTTCAAAATGCTGAGTTTGACATTAAAAAAGAAGCTGCATGGGCACTCTCCAATGCTACATCTGGCGGTGGTAACTTACCAAATATTTTTGTTACAAGGTACTTGGTGAGCCAGGGTTGCATTAAGCCTCTGTGTGATCTTCTTGTTTGCCCCGATCCAAGAATTGTTACCGTCTGTCTAGAAGGTCTTGAGAATATTTTGAAGATTGGAGAAGCAGAGAAAAGCTTTGGTAACGCGGGAGATGTCAACTTGTATGCTCAGATGATAGATGAGGCTGAGGGATTGGAAAAGATTGAGAACCTGCAGAGTCATGACAACAATGAAATTTATGAGAAGGCTGTTAAAATTCTTGAGACATATTGGTTGGAAGATGACGACGAGACACTACCACCAGGCGATGGTTCTCAACCTGGTTTTAATTTTGGAGGCAATGACCTTCCGGTCCCATCTGGTGGATTTAACTTCGGTTAA
Protein sequence

>MsG0280007896.01.T01

MSLRPNARTEVRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLLKKRREGLQNQPQFATPLQSSSIVEKKFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLSSQVMMFGSRHPSPSVLIPALRTVGNIVTGDDAQTQAIIGHGSLPCLLSLLTHNHKKSIKKEACWTISNITAGNKEQIQAVIEAGLIAPLVNLLQNAEFDIKKEAAWALSNATSGGGNLPNIFVTRYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKIGEAEKSFGNAGDVNLYAQMIDEAEGLEKIENLQSHDNNEIYEKAVKILETYWLEDDDETLPPGDGSQPGFNFGGNDLPVPSGGFNFG*