AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023291.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023291.01.T01 MTR_8g089975 76.696 339 1 2 1 261 1 339 0.0 501
MsG0480023291.01.T01 MTR_5g064540 60.417 336 56 2 1 259 1 336 1.48e-141 401
MsG0480023291.01.T01 MTR_3g086940 66.667 282 45 1 2 234 3 284 2.47e-134 383
MsG0480023291.01.T01 MTR_4g086855 57.849 344 60 5 2 261 21 363 1.51e-131 376
MsG0480023291.01.T01 MTR_4g099240 57.101 338 57 5 2 257 3 334 2.90e-127 365
MsG0480023291.01.T01 MTR_2g006330 65.556 270 44 1 1 221 1 270 4.39e-125 360
MsG0480023291.01.T01 MTR_3g097320 64.599 274 48 1 1 225 1 274 5.54e-125 359
MsG0480023291.01.T01 MTR_8g095330 63.504 274 51 1 1 225 2 275 7.54e-124 357
MsG0480023291.01.T01 MTR_1g034030 63.214 280 51 2 2 232 22 298 1.31e-123 356
MsG0480023291.01.T01 MTR_8g079560 54.519 343 72 5 2 261 21 362 4.40e-122 352
MsG0480023291.01.T01 MTR_8g089975 69.962 263 1 2 77 261 1 263 7.71e-122 348
MsG0480023291.01.T01 MTR_5g013550 60.967 269 54 2 2 221 4 270 2.93e-116 337
MsG0480023291.01.T01 MTR_5g064540 65.992 247 35 1 1 198 1 247 4.14e-114 328
MsG0480023291.01.T01 MTR_1g034030 65.984 244 34 1 2 196 22 265 7.89e-111 322
MsG0480023291.01.T01 MTR_5g018050 51.744 344 78 5 2 261 16 355 2.06e-110 322
MsG0480023291.01.T01 MTR_4g099220 59.216 255 55 1 16 221 23 277 3.16e-102 301
MsG0480023291.01.T01 MTR_5g018050 49.508 305 68 4 40 261 21 322 2.40e-90 270
MsG0480023291.01.T01 MTR_5g018050 60.731 219 35 2 2 169 16 234 2.25e-87 260
MsG0480023291.01.T01 MTR_4g086855 52.045 269 44 5 77 261 1 268 4.46e-84 252
MsG0480023291.01.T01 MTR_2g006330 62.371 194 24 1 77 221 1 194 2.52e-79 241
MsG0480023291.01.T01 MTR_8g088740 50.267 187 47 1 1 141 1 187 1.59e-60 189
MsG0480023291.01.T01 MTR_5g075100 34.783 276 119 5 3 223 22 291 2.74e-43 152
MsG0480023291.01.T01 MTR_6g048250 34.082 267 119 4 1 216 16 276 1.43e-42 149
MsG0480023291.01.T01 MTR_5g088350 33.333 276 123 6 4 224 13 282 1.87e-42 148
MsG0480023291.01.T01 MTR_6g048250 34.082 267 119 4 1 216 16 276 4.80e-42 149
MsG0480023291.01.T01 MTR_5g088350 33.333 276 123 6 4 224 13 282 7.89e-42 148
MsG0480023291.01.T01 MTR_6g012990 33.708 267 120 4 1 216 16 276 1.41e-41 146
MsG0480023291.01.T01 MTR_4g114670 33.846 260 126 6 3 222 10 263 1.63e-41 147
MsG0480023291.01.T01 MTR_2g045470 32.453 265 119 6 1 211 17 275 1.76e-41 148
MsG0480023291.01.T01 MTR_5g088350 33.333 276 123 6 4 224 13 282 1.97e-41 147
MsG0480023291.01.T01 MTR_6g048250 34.082 267 119 4 1 216 16 276 2.52e-41 148
MsG0480023291.01.T01 MTR_6g012990 33.708 267 120 4 1 216 16 276 9.58e-41 147
MsG0480023291.01.T01 MTR_4g114670 32.234 273 126 6 3 222 10 276 4.44e-40 142
MsG0480023291.01.T01 MTR_3g099920 32.210 267 124 4 1 216 16 276 1.39e-39 143
MsG0480023291.01.T01 MTR_4g114670 32.234 273 126 6 3 222 10 276 1.47e-39 142
MsG0480023291.01.T01 MTR_4g123940 31.597 288 136 6 1 233 23 304 1.17e-38 138
MsG0480023291.01.T01 MTR_5g067150 31.985 272 126 6 3 221 8 273 3.70e-38 137
MsG0480023291.01.T01 MTR_4g123940 31.597 288 136 6 1 233 23 304 8.33e-38 138
MsG0480023291.01.T01 MTR_5g067150 32.000 275 128 6 3 224 8 276 1.08e-37 137
MsG0480023291.01.T01 MTR_4g029020 29.904 311 153 8 1 253 9 312 1.54e-37 137
MsG0480023291.01.T01 MTR_5g067150 32.000 275 128 6 3 224 8 276 1.58e-37 137
MsG0480023291.01.T01 MTR_3g466400 33.704 270 116 8 1 215 11 272 2.98e-37 137
MsG0480023291.01.T01 MTR_8g024590 30.292 274 133 4 3 224 16 283 4.04e-37 136
MsG0480023291.01.T01 MTR_2g049790 28.814 295 149 6 3 242 22 310 9.75e-37 135
MsG0480023291.01.T01 MTR_8g024600 30.545 275 132 5 3 224 16 284 2.56e-36 134
MsG0480023291.01.T01 MTR_3g466480 32.982 285 129 7 3 232 20 297 7.70e-36 132
MsG0480023291.01.T01 MTR_8g086380 32.075 265 120 6 1 211 23 281 4.01e-35 131
MsG0480023291.01.T01 MTR_6g012980 31.086 267 127 5 1 216 70 330 4.31e-35 130
MsG0480023291.01.T01 MTR_2g016340 29.963 267 126 6 1 213 9 268 8.95e-35 130
MsG0480023291.01.T01 MTR_1g013700 29.430 316 141 8 3 261 12 302 4.98e-34 127
MsG0480023291.01.T01 MTR_7g072575 33.209 268 120 8 1 215 9 270 7.10e-34 127
MsG0480023291.01.T01 MTR_5g075060 31.321 265 121 7 1 211 9 266 7.70e-34 127
MsG0480023291.01.T01 MTR_3g072320 33.984 256 112 7 1 205 9 258 1.50e-33 126
MsG0480023291.01.T01 MTR_4g006970 30.038 263 123 5 3 211 19 274 8.98e-33 124
MsG0480023291.01.T01 MTR_4g131060 30.224 268 126 6 3 216 17 277 1.31e-32 124
MsG0480023291.01.T01 MTR_1g040875 30.855 269 126 6 1 215 21 283 3.37e-32 122
MsG0480023291.01.T01 MTR_4g128820 30.769 260 123 5 3 211 9 262 6.67e-32 122
MsG0480023291.01.T01 MTR_1g103760 31.119 286 137 8 1 232 9 288 1.59e-30 118
MsG0480023291.01.T01 MTR_2g105010 30.798 263 121 7 3 211 13 268 7.89e-30 116
MsG0480023291.01.T01 MTR_1g076370 31.022 274 127 8 1 218 17 284 1.14e-29 115
MsG0480023291.01.T01 MTR_7g072605 28.409 264 128 5 3 211 15 272 1.07e-27 110
MsG0480023291.01.T01 MTR_5g092810 31.061 264 121 8 4 211 92 350 8.40e-27 108
MsG0480023291.01.T01 MTR_4g066660 30.526 285 133 10 2 231 70 344 1.76e-26 108
MsG0480023291.01.T01 MTR_3g051770 29.924 264 124 7 4 211 84 342 6.13e-26 106
MsG0480023291.01.T01 MTR_8g088745 57.333 75 32 0 144 218 1 75 1.44e-25 98.2
MsG0480023291.01.T01 MTR_5g092815 31.061 264 121 9 4 211 91 349 2.62e-25 103
MsG0480023291.01.T01 MTR_1g041150 30.189 265 126 7 2 211 116 376 3.19e-25 104
MsG0480023291.01.T01 MTR_1g052530 28.571 266 131 9 1 211 49 310 1.02e-24 102
MsG0480023291.01.T01 MTR_1g055255 29.699 266 128 6 2 212 122 383 1.32e-24 102
MsG0480023291.01.T01 MTR_5g089320 30.216 278 127 8 4 226 68 333 1.65e-24 102
MsG0480023291.01.T01 MTR_1g052530 28.571 266 131 9 1 211 49 310 1.82e-24 101
MsG0480023291.01.T01 MTR_8g095440 29.104 268 131 7 2 214 28 291 3.64e-24 101
MsG0480023291.01.T01 MTR_1g096490 30.075 266 127 8 2 212 28 289 3.69e-24 101
MsG0480023291.01.T01 MTR_1g054865 30.916 262 122 10 4 210 161 418 4.12e-24 101
MsG0480023291.01.T01 MTR_8g095440 29.478 268 130 8 2 214 28 291 4.47e-24 100
MsG0480023291.01.T01 MTR_2g016280 30.126 239 125 6 1 213 28 250 4.57e-24 100
MsG0480023291.01.T01 MTR_7g106730 29.924 264 126 6 2 210 86 345 5.58e-24 99.8
MsG0480023291.01.T01 MTR_8g040300 26.538 260 137 5 4 214 10 264 6.18e-24 97.8
MsG0480023291.01.T01 MTR_8g024600 30.435 207 89 4 67 224 1 201 4.81e-23 96.7
MsG0480023291.01.T01 MTR_8g035890 26.923 260 136 5 4 214 16 270 5.67e-23 95.1
MsG0480023291.01.T01 MTR_1g026190 31.086 267 121 9 4 211 78 340 6.67e-23 97.8
MsG0480023291.01.T01 MTR_2g045470 29.442 197 83 5 65 211 5 195 7.00e-23 96.7
MsG0480023291.01.T01 MTR_0028s0170 28.777 278 131 8 4 226 78 343 7.02e-23 97.8
MsG0480023291.01.T01 MTR_4g132070 29.924 264 124 8 4 211 91 349 1.33e-22 97.1
MsG0480023291.01.T01 MTR_7g091890 29.057 265 129 10 3 212 57 317 2.37e-22 96.3
MsG0480023291.01.T01 MTR_7g091890 28.679 265 130 9 3 212 57 317 4.90e-22 94.7
MsG0480023291.01.T01 MTR_4g019410 28.137 263 129 8 4 211 19 276 1.54e-21 94.0
MsG0480023291.01.T01 MTR_4g019410 28.137 263 129 8 4 211 19 276 1.66e-21 94.0
MsG0480023291.01.T01 MTR_4g107490 28.014 282 127 12 2 217 71 342 2.48e-21 93.2
MsG0480023291.01.T01 MTR_3g098090 27.444 266 134 7 2 212 30 291 3.05e-21 92.8
MsG0480023291.01.T01 MTR_3g098070 27.985 268 134 7 2 214 27 290 6.57e-21 92.0
MsG0480023291.01.T01 MTR_3g110405 24.231 260 143 5 4 214 37 291 1.07e-20 89.4
MsG0480023291.01.T01 MTR_3g098070 27.444 266 134 6 2 212 27 288 1.21e-20 90.1
MsG0480023291.01.T01 MTR_5g099240 27.444 266 134 6 4 214 24 285 3.89e-20 89.7
MsG0480023291.01.T01 MTR_2g094090 26.792 265 128 8 10 214 125 383 4.04e-20 89.0
MsG0480023291.01.T01 MTR_7g068710 27.437 277 135 10 2 217 54 325 4.68e-20 89.4
MsG0480023291.01.T01 MTR_3g099767 27.381 252 126 8 10 212 118 361 4.87e-20 89.4
MsG0480023291.01.T01 MTR_5g099240 27.444 266 134 6 4 214 96 357 5.49e-20 89.4
MsG0480023291.01.T01 MTR_2g019575 38.983 118 65 3 108 224 56 167 9.26e-20 86.7
MsG0480023291.01.T01 MTR_5g022030 27.675 271 125 9 2 210 97 358 1.15e-19 88.2
MsG0480023291.01.T01 MTR_2g019575 38.983 118 65 3 108 224 56 167 1.44e-19 86.7
MsG0480023291.01.T01 MTR_5g022030 27.675 271 125 9 2 210 97 358 1.90e-19 87.8
MsG0480023291.01.T01 MTR_7g106710 28.788 264 129 8 2 210 133 392 3.70e-19 87.0
MsG0480023291.01.T01 MTR_7g106710 28.788 264 129 8 2 210 133 392 5.17e-19 86.7
MsG0480023291.01.T01 MTR_7g106710 28.679 265 130 8 2 211 133 393 8.38e-19 85.9
MsG0480023291.01.T01 MTR_7g106710 28.679 265 130 8 2 211 133 393 9.59e-19 85.5
MsG0480023291.01.T01 MTR_5g009830 27.652 264 130 8 4 211 67 325 1.90e-18 84.7
MsG0480023291.01.T01 MTR_5g009830 27.652 264 130 8 4 211 67 325 2.83e-18 84.0
MsG0480023291.01.T01 MTR_7g116390 25.564 266 141 6 2 213 14 276 4.96e-18 82.0
MsG0480023291.01.T01 MTR_4g059560 25.279 269 127 7 10 214 123 381 9.77e-17 79.3
MsG0480023291.01.T01 MTR_1g080020 25.758 264 138 8 3 213 8 266 3.11e-16 76.6
MsG0480023291.01.T01 MTR_4g132040 26.038 265 134 9 4 211 95 354 2.64e-15 75.5
MsG0480023291.01.T01 MTR_2g040150 40.952 105 57 3 109 211 319 420 7.13e-14 71.2
MsG0480023291.01.T01 MTR_0464s0040 29.630 189 79 5 1 136 9 196 1.41e-13 67.8
MsG0480023291.01.T01 MTR_7g097150 38.168 131 68 7 109 232 317 441 6.78e-13 68.6
MsG0480023291.01.T01 MTR_3g088715 29.907 107 70 2 108 214 27 128 7.95e-13 64.3
MsG0480023291.01.T01 MTR_1g026075 35.398 113 68 2 4 111 74 186 1.09e-12 66.2
MsG0480023291.01.T01 MTR_3g104700 35.211 142 82 6 109 244 300 437 2.54e-12 66.6
MsG0480023291.01.T01 MTR_1g442790 33.793 145 86 6 109 247 309 449 3.02e-12 66.6
MsG0480023291.01.T01 MTR_1g442790 33.793 145 86 6 109 247 309 449 3.83e-12 66.2
MsG0480023291.01.T01 MTR_8g070530 30.675 163 85 7 105 249 781 933 2.01e-11 64.3
MsG0480023291.01.T01 MTR_1g019340 39.815 108 54 6 109 211 307 408 4.73e-11 62.8
MsG0480023291.01.T01 MTR_4g035835 29.032 186 106 7 43 211 871 1047 4.87e-11 63.2
MsG0480023291.01.T01 MTR_1g019340 39.091 110 52 6 109 211 307 408 6.36e-11 62.4
MsG0480023291.01.T01 MTR_1g042700 39.815 108 53 7 109 211 314 414 8.37e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023291.01.T01 AT4G40010 69.847 262 30 1 1 213 1 262 2.31e-131 375
MsG0480023291.01.T01 AT1G78290 66.906 278 40 2 1 226 1 278 1.39e-128 368
MsG0480023291.01.T01 AT1G78290 66.906 278 40 2 1 226 1 278 1.39e-128 368
MsG0480023291.01.T01 AT4G33950 66.052 271 43 1 2 223 19 289 5.96e-127 364
MsG0480023291.01.T01 AT5G08590 63.504 274 51 1 1 225 1 274 1.86e-124 358
MsG0480023291.01.T01 AT5G66880 61.986 292 59 2 2 244 20 308 3.69e-124 358
MsG0480023291.01.T01 AT5G66880 61.986 292 59 2 2 244 20 308 3.69e-124 358
MsG0480023291.01.T01 AT4G33950 56.977 344 64 4 2 261 19 362 7.85e-124 357
MsG0480023291.01.T01 AT1G60940 65.556 270 44 1 1 221 1 270 1.48e-123 356
MsG0480023291.01.T01 AT1G60940 65.556 270 44 1 1 221 1 270 1.48e-123 356
MsG0480023291.01.T01 AT1G10940 64.234 274 49 1 1 225 1 274 2.67e-123 355
MsG0480023291.01.T01 AT5G63650 63.504 274 51 1 1 225 1 274 3.21e-123 355
MsG0480023291.01.T01 AT3G50500 59.589 292 66 2 2 244 21 309 2.00e-119 345
MsG0480023291.01.T01 AT2G23030 60.741 270 57 1 1 221 1 270 6.06e-113 328
MsG0480023291.01.T01 AT3G50500 56.187 299 72 3 2 244 21 316 2.58e-110 323
MsG0480023291.01.T01 AT1G10940 57.092 282 64 5 1 225 1 282 2.19e-103 305
MsG0480023291.01.T01 AT5G08590 60.101 198 30 1 77 225 1 198 4.79e-79 240
MsG0480023291.01.T01 AT4G24400 33.456 272 122 6 3 221 8 273 6.29e-43 151
MsG0480023291.01.T01 AT4G24400 33.456 272 122 6 3 221 8 273 1.52e-42 150
MsG0480023291.01.T01 AT3G01090 33.708 267 120 4 1 216 16 276 6.06e-42 150
MsG0480023291.01.T01 AT3G01090 33.708 267 120 4 1 216 16 276 6.06e-42 150
MsG0480023291.01.T01 AT3G01090 33.708 267 120 4 1 216 39 299 6.29e-42 150
MsG0480023291.01.T01 AT5G35410 33.700 273 122 6 3 222 10 276 1.18e-41 147
MsG0480023291.01.T01 AT5G25110 33.333 276 121 6 3 222 42 310 1.55e-41 149
MsG0480023291.01.T01 AT5G35410 33.700 273 122 6 3 222 10 276 5.23e-41 146
MsG0480023291.01.T01 AT3G29160 33.333 267 121 4 1 216 17 277 9.46e-41 144
MsG0480023291.01.T01 AT2G26980 31.206 282 134 5 3 230 13 288 2.30e-40 143
MsG0480023291.01.T01 AT5G10930 32.852 277 122 6 3 222 11 280 5.75e-40 144
MsG0480023291.01.T01 AT2G26980 31.206 282 134 5 3 230 13 288 6.51e-40 143
MsG0480023291.01.T01 AT2G26980 31.206 282 134 5 3 230 13 288 8.60e-40 143
MsG0480023291.01.T01 AT2G26980 31.206 282 134 5 3 230 23 298 1.07e-39 143
MsG0480023291.01.T01 AT3G29160 33.333 267 121 4 1 216 17 277 1.08e-39 144
MsG0480023291.01.T01 AT3G29160 33.333 267 121 4 1 216 17 277 1.08e-39 144
MsG0480023291.01.T01 AT3G17510 33.208 265 117 6 1 211 17 275 3.86e-39 141
MsG0480023291.01.T01 AT5G21326 30.851 282 135 5 3 230 12 287 3.28e-38 139
MsG0480023291.01.T01 AT1G30270 29.710 276 134 5 3 224 30 299 3.55e-38 139
MsG0480023291.01.T01 AT1G30270 29.710 276 134 5 3 224 30 299 3.74e-38 139
MsG0480023291.01.T01 AT2G34180 34.201 269 116 5 1 215 54 315 3.94e-38 140
MsG0480023291.01.T01 AT1G01140 30.492 305 133 7 4 254 19 298 4.91e-38 139
MsG0480023291.01.T01 AT1G01140 31.206 282 133 6 4 230 19 294 4.95e-38 139
MsG0480023291.01.T01 AT2G30360 31.579 266 121 4 3 213 20 279 9.25e-38 137
MsG0480023291.01.T01 AT1G01140 30.492 305 135 7 4 254 19 300 1.24e-37 137
MsG0480023291.01.T01 AT5G39440 33.209 268 121 6 1 217 16 276 1.46e-37 138
MsG0480023291.01.T01 AT1G48260 31.179 263 121 5 3 211 10 266 2.26e-37 136
MsG0480023291.01.T01 AT3G23000 32.959 267 119 6 3 215 24 284 1.12e-36 134
MsG0480023291.01.T01 AT5G01810 33.829 269 117 7 1 215 9 270 1.22e-36 133
MsG0480023291.01.T01 AT5G01810 33.829 269 117 7 1 215 9 270 1.41e-36 134
MsG0480023291.01.T01 AT5G01810 33.829 269 117 7 1 215 9 270 1.41e-36 134
MsG0480023291.01.T01 AT2G26980 31.855 248 109 5 3 196 13 254 2.95e-36 130
MsG0480023291.01.T01 AT1G29230 33.086 269 119 5 1 215 71 332 4.65e-35 131
MsG0480023291.01.T01 AT4G18700 30.323 310 147 8 1 255 23 318 6.67e-35 130
MsG0480023291.01.T01 AT4G14580 30.147 272 129 5 1 217 18 283 1.19e-34 129
MsG0480023291.01.T01 AT5G07070 30.741 270 126 6 2 217 10 272 3.34e-34 128
MsG0480023291.01.T01 AT5G45810 30.483 269 126 5 1 215 25 286 4.57e-34 128
MsG0480023291.01.T01 AT5G58380 30.627 271 127 7 2 218 10 273 6.36e-34 128
MsG0480023291.01.T01 AT5G45820 29.779 272 124 5 1 215 9 270 3.43e-33 125
MsG0480023291.01.T01 AT5G21222 30.496 282 136 5 3 230 12 287 1.04e-32 126
MsG0480023291.01.T01 AT5G21222 30.496 282 136 5 3 230 12 287 1.04e-32 126
MsG0480023291.01.T01 AT5G21222 30.496 282 136 5 3 230 12 287 1.04e-32 126
MsG0480023291.01.T01 AT5G21222 30.496 282 136 5 3 230 12 287 1.04e-32 126
MsG0480023291.01.T01 AT2G38490 34.601 263 111 6 3 211 27 282 1.05e-32 124
MsG0480023291.01.T01 AT5G57630 34.221 263 110 7 3 211 11 264 3.72e-32 122
MsG0480023291.01.T01 AT5G57630 34.221 263 110 7 3 211 11 264 4.12e-32 122
MsG0480023291.01.T01 AT2G25090 30.797 276 123 6 2 215 13 282 3.47e-31 120
MsG0480023291.01.T01 AT4G11373 77.941 68 15 0 32 99 1 68 5.80e-31 111
MsG0480023291.01.T01 AT5G01820 32.319 263 117 5 3 211 21 276 6.09e-30 117
MsG0480023291.01.T01 AT4G30960 29.323 266 127 5 3 214 23 281 7.02e-30 116
MsG0480023291.01.T01 AT2G45490 28.462 260 132 5 4 214 22 276 5.44e-29 111
MsG0480023291.01.T01 AT1G50700 29.167 264 126 6 4 211 73 331 9.05e-27 108
MsG0480023291.01.T01 AT1G50700 29.167 264 126 6 4 211 73 331 1.15e-26 108
MsG0480023291.01.T01 AT1G50700 29.167 264 126 6 4 211 73 331 1.39e-26 107
MsG0480023291.01.T01 AT5G12180 30.000 280 129 8 4 228 73 340 1.44e-26 108
MsG0480023291.01.T01 AT2G25880 27.193 228 144 5 4 214 25 247 4.04e-26 103
MsG0480023291.01.T01 AT5G19360 30.714 280 127 9 4 228 68 335 5.11e-26 106
MsG0480023291.01.T01 AT2G31500 31.559 263 121 9 3 210 65 323 3.19e-25 104
MsG0480023291.01.T01 AT1G76040 30.798 263 123 7 4 211 112 370 3.88e-25 104
MsG0480023291.01.T01 AT1G76040 30.798 263 123 7 4 211 112 370 4.86e-25 103
MsG0480023291.01.T01 AT3G20410 28.409 264 128 6 4 211 91 349 5.98e-25 103
MsG0480023291.01.T01 AT3G20410 28.409 264 128 6 4 211 91 349 5.98e-25 103
MsG0480023291.01.T01 AT5G04870 29.924 264 126 7 2 210 148 407 9.37e-25 103
MsG0480023291.01.T01 AT5G12480 29.434 265 128 9 3 212 58 318 1.53e-24 102
MsG0480023291.01.T01 AT2G41860 27.925 265 132 8 2 211 52 312 2.05e-24 102
MsG0480023291.01.T01 AT1G30270 28.846 208 92 4 67 224 1 202 2.08e-24 100
MsG0480023291.01.T01 AT2G41860 27.925 265 132 8 2 211 52 312 2.37e-24 102
MsG0480023291.01.T01 AT2G17290 29.699 266 128 7 4 214 85 346 3.75e-24 101
MsG0480023291.01.T01 AT2G17290 29.699 266 128 7 4 214 85 346 3.75e-24 101
MsG0480023291.01.T01 AT4G09570 31.203 266 124 8 2 212 23 284 4.29e-24 101
MsG0480023291.01.T01 AT1G35670 31.203 266 124 8 2 212 24 285 4.30e-24 100
MsG0480023291.01.T01 AT4G35310 29.699 266 128 6 4 214 97 358 9.84e-24 100
MsG0480023291.01.T01 AT4G35310 29.699 266 128 6 4 214 97 358 9.84e-24 100
MsG0480023291.01.T01 AT3G10660 29.167 264 128 7 2 210 184 443 1.10e-23 100
MsG0480023291.01.T01 AT3G10660 29.167 264 128 7 2 210 184 443 1.10e-23 100
MsG0480023291.01.T01 AT1G12580 28.679 265 130 6 2 211 42 302 1.25e-23 99.8
MsG0480023291.01.T01 AT3G17510 31.980 197 78 5 65 211 5 195 2.46e-23 97.8
MsG0480023291.01.T01 AT2G38910 29.771 262 125 10 4 210 134 391 2.92e-23 99.0
MsG0480023291.01.T01 AT5G23580 31.008 258 119 9 10 212 28 281 5.27e-23 97.8
MsG0480023291.01.T01 AT4G04720 28.137 263 130 7 4 211 80 338 1.08e-22 97.1
MsG0480023291.01.T01 AT4G04720 28.137 263 130 7 4 211 80 338 1.08e-22 97.1
MsG0480023291.01.T01 AT4G04695 29.057 265 119 8 9 211 33 290 1.11e-22 97.1
MsG0480023291.01.T01 AT2G35890 29.057 265 129 8 2 211 130 390 1.89e-22 96.7
MsG0480023291.01.T01 AT2G35890 29.057 265 129 8 2 211 130 390 1.89e-22 96.7
MsG0480023291.01.T01 AT4G04700 29.588 267 125 8 4 211 28 290 2.81e-22 95.9
MsG0480023291.01.T01 AT4G38230 27.444 266 134 6 4 214 54 315 3.11e-22 95.9
MsG0480023291.01.T01 AT4G38230 27.444 266 134 6 4 214 24 285 3.27e-22 95.5
MsG0480023291.01.T01 AT4G38230 27.444 266 134 6 4 214 24 285 3.27e-22 95.5
MsG0480023291.01.T01 AT5G19450 28.137 263 130 10 4 211 57 315 4.05e-22 95.5
MsG0480023291.01.T01 AT5G19450 28.137 263 130 10 4 211 57 315 4.05e-22 95.5
MsG0480023291.01.T01 AT1G12680 27.907 258 129 8 4 212 107 356 6.02e-22 94.7
MsG0480023291.01.T01 AT2G25880 24.231 260 143 5 4 214 38 292 1.07e-21 92.4
MsG0480023291.01.T01 AT2G25880 24.231 260 143 5 4 214 25 279 1.11e-21 92.0
MsG0480023291.01.T01 AT1G61950 28.947 266 129 8 2 211 96 357 1.35e-21 94.0
MsG0480023291.01.T01 AT4G32830 24.615 260 142 5 4 214 31 285 1.91e-21 91.3
MsG0480023291.01.T01 AT2G25880 24.231 260 143 5 4 214 86 340 2.19e-21 92.0
MsG0480023291.01.T01 AT2G17890 29.520 271 118 9 3 210 107 367 8.17e-21 92.0
MsG0480023291.01.T01 AT1G18890 26.950 282 130 11 2 217 61 332 9.43e-21 91.7
MsG0480023291.01.T01 AT4G23650 29.658 263 126 8 4 211 78 336 9.60e-21 91.7
MsG0480023291.01.T01 AT3G51850 27.174 276 137 9 2 217 52 323 1.36e-20 91.3
MsG0480023291.01.T01 AT3G51850 27.174 276 137 9 2 217 52 323 1.39e-20 90.9
MsG0480023291.01.T01 AT1G48260 29.412 187 76 4 75 211 1 181 2.70e-20 89.0
MsG0480023291.01.T01 AT1G48260 29.412 187 76 4 75 211 1 181 2.70e-20 89.0
MsG0480023291.01.T01 AT1G48260 29.412 187 76 4 75 211 1 181 2.70e-20 89.0
MsG0480023291.01.T01 AT1G48260 29.412 187 76 4 75 211 1 181 2.70e-20 89.0
MsG0480023291.01.T01 AT3G51850 27.174 276 137 9 2 217 52 323 2.75e-20 89.7
MsG0480023291.01.T01 AT5G60550 25.182 274 137 7 1 212 104 371 5.62e-20 89.0
MsG0480023291.01.T01 AT4G21940 26.894 264 132 8 4 211 102 360 7.81e-20 89.0
MsG0480023291.01.T01 AT4G21940 26.894 264 132 8 4 211 102 360 8.42e-20 89.0
MsG0480023291.01.T01 AT4G21940 26.894 264 132 8 4 211 102 360 9.07e-20 88.6
MsG0480023291.01.T01 AT3G04530 26.792 265 135 8 4 213 11 271 2.24e-19 85.5
MsG0480023291.01.T01 AT4G04710 26.909 275 130 9 2 216 34 297 5.41e-19 86.3
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.09e-18 85.5
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.25e-18 85.5
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.25e-18 85.5
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.25e-18 85.5
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.25e-18 85.5
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.25e-18 85.5
MsG0480023291.01.T01 AT4G04740 26.953 256 124 7 6 211 85 327 1.25e-18 85.5
MsG0480023291.01.T01 AT5G66210 27.068 266 133 7 2 210 60 321 2.99e-18 84.0
MsG0480023291.01.T01 AT5G66210 27.068 266 133 7 2 210 60 321 2.99e-18 84.0
MsG0480023291.01.T01 AT5G66210 27.068 266 133 7 2 210 60 321 3.43e-18 84.0
MsG0480023291.01.T01 AT5G66210 27.068 266 133 7 2 210 60 321 3.62e-18 84.0
MsG0480023291.01.T01 AT5G66210 27.306 271 126 8 2 210 60 321 4.28e-18 84.0
MsG0480023291.01.T01 AT5G66210 27.306 271 126 8 2 210 60 321 4.28e-18 84.0
MsG0480023291.01.T01 AT1G08650 23.308 266 147 5 2 213 13 275 1.12e-17 80.9
MsG0480023291.01.T01 AT3G45240 25.670 261 131 7 8 211 112 366 1.22e-17 82.0
MsG0480023291.01.T01 AT3G45240 25.379 264 131 7 8 211 112 369 3.64e-17 80.5
MsG0480023291.01.T01 AT3G45240 25.379 264 131 7 8 211 112 369 3.64e-17 80.5
MsG0480023291.01.T01 AT5G57630 40.517 116 56 4 103 211 67 176 3.18e-15 74.7
MsG0480023291.01.T01 AT3G25250 37.681 138 65 5 86 211 201 329 6.47e-15 74.3
MsG0480023291.01.T01 AT3G23310 35.948 153 86 7 109 255 320 466 1.19e-14 73.6
MsG0480023291.01.T01 AT4G14350 42.593 108 51 6 109 211 317 418 4.53e-14 72.0
MsG0480023291.01.T01 AT4G14350 42.593 108 51 6 109 211 317 418 5.17e-14 72.0
MsG0480023291.01.T01 AT4G14350 42.593 108 51 6 109 211 317 418 5.17e-14 72.0
MsG0480023291.01.T01 AT4G14350 42.593 108 51 6 109 211 317 418 5.17e-14 72.0
MsG0480023291.01.T01 AT1G76040 36.538 104 62 2 108 211 33 132 7.60e-14 70.5
MsG0480023291.01.T01 AT1G76040 36.538 104 62 2 108 211 33 132 7.60e-14 70.5
MsG0480023291.01.T01 AT4G33080 36.735 147 78 8 109 246 300 440 7.62e-14 71.2
MsG0480023291.01.T01 AT4G33080 36.735 147 78 8 109 246 300 440 8.32e-14 71.2
MsG0480023291.01.T01 AT4G04710 26.400 250 113 9 27 216 45 283 2.37e-13 69.7
MsG0480023291.01.T01 AT1G30640 30.811 185 108 8 53 228 173 346 8.25e-13 68.2
MsG0480023291.01.T01 AT1G03920 38.318 107 57 5 109 211 334 435 1.35e-12 67.8
MsG0480023291.01.T01 AT1G03920 38.318 107 57 5 109 211 334 435 1.35e-12 67.8
MsG0480023291.01.T01 AT1G30640 30.811 185 108 8 53 228 266 439 1.54e-12 67.4
MsG0480023291.01.T01 AT1G30640 30.811 185 108 8 53 228 266 439 1.54e-12 67.4
MsG0480023291.01.T01 AT1G03920 38.318 107 57 5 109 211 221 322 1.82e-12 67.0
MsG0480023291.01.T01 AT4G13000 34.848 132 72 4 86 211 199 322 2.49e-12 66.6
MsG0480023291.01.T01 AT2G19400 40.909 110 52 6 109 211 311 414 3.79e-12 66.2
MsG0480023291.01.T01 AT5G12480 35.294 102 62 4 111 212 127 224 4.69e-12 65.9
MsG0480023291.01.T01 AT5G62310 31.319 182 108 7 43 211 866 1043 5.64e-12 65.9
MsG0480023291.01.T01 AT3G45780 29.333 150 96 4 109 254 851 994 7.36e-12 65.5
MsG0480023291.01.T01 AT3G45780 29.333 150 96 4 109 254 851 994 7.36e-12 65.5
MsG0480023291.01.T01 AT4G38230 30.476 105 69 2 110 214 41 141 2.78e-11 63.2
MsG0480023291.01.T01 AT1G79250 33.645 107 62 3 109 211 379 480 8.41e-11 62.4
MsG0480023291.01.T01 AT1G79250 33.645 107 62 3 109 211 379 480 8.41e-11 62.4
MsG0480023291.01.T01 AT1G79250 33.645 107 62 3 109 211 379 480 8.41e-11 62.4
MsG0480023291.01.T01 AT1G79250 33.645 107 62 3 109 211 379 480 8.41e-11 62.4
MsG0480023291.01.T01 AT1G45160 35.000 120 65 5 96 211 845 955 8.57e-11 62.4
MsG0480023291.01.T01 AT1G16440 32.710 107 63 3 109 211 335 436 9.73e-11 62.0

Find 53 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACCACTAGAATTTA+TGG 0.173862 4:+83407484 MsG0480023291.01.T01:CDS
GTTCATTGAAAGAGGCTTTA+AGG 0.221535 4:+83404728 MsG0480023291.01.T01:CDS
CTCTTTAAATCTAACAATAT+TGG 0.229297 4:-83404915 None:intergenic
TTGGTGTTGCAAAGCTTATA+AGG 0.306850 4:+83404673 MsG0480023291.01.T01:CDS
TCTTTAAATCTAACAATATT+GGG 0.314393 4:-83404914 None:intergenic
GGGGTTCCTACAGTTGATTT+TGG 0.324565 4:-83406577 None:intergenic
TATGAGATAATTAAAGATAT+TGG 0.325687 4:+83404639 MsG0480023291.01.T01:CDS
GTGATTAGATTGCAGATGTT+TGG 0.368413 4:+83406759 MsG0480023291.01.T01:intron
ACTTTGTATGTTATGCTTGT+TGG 0.369809 4:+83406794 MsG0480023291.01.T01:CDS
TGAGTAATGCGAACATAGTC+TGG 0.378616 4:-83407016 None:intergenic
AACAATATTGGGATGCTTCA+AGG 0.402487 4:-83404903 None:intergenic
TGGTGTTGCAAAGCTTATAA+GGG 0.406779 4:+83404674 MsG0480023291.01.T01:CDS
ATTTGTTGCCAACCCTGATA+AGG 0.427040 4:+83407066 MsG0480023291.01.T01:CDS
ATCACTATTGCTAAATGAGT+TGG 0.430650 4:-83405358 None:intergenic
TTGCAGATGTTTGGTCTTGT+GGG 0.431939 4:+83406768 MsG0480023291.01.T01:CDS
ACCTCTGGTGCAATGTAAGC+AGG 0.439335 4:-83406598 None:intergenic
GGGTCTTCTGGATCTTCAAA+AGG 0.440409 4:-83406824 None:intergenic
GATATTGGATCAGGTAACTT+TGG 0.453971 4:+83404654 MsG0480023291.01.T01:CDS
GCTGTCAAGTTCATTGAAAG+AGG 0.456433 4:+83404720 MsG0480023291.01.T01:CDS
CAATATTGTTAGATTTAAAG+AGG 0.459630 4:+83404916 MsG0480023291.01.T01:CDS
TTTGAAAGAATTTGTACTGC+TGG 0.460591 4:+83405406 MsG0480023291.01.T01:CDS
ATAATTAAAGATATTGGATC+AGG 0.462914 4:+83404645 MsG0480023291.01.T01:CDS
ATTGCAGATGTTTGGTCTTG+TGG 0.463902 4:+83406767 MsG0480023291.01.T01:CDS
CCACTAGAATTTATGGAGGA+TGG 0.483576 4:+83407491 MsG0480023291.01.T01:CDS
TCTCTTCTTGACAATACCTC+TGG 0.488136 4:-83406613 None:intergenic
AATTATCTCATATCGTTCCA+TGG 0.489564 4:-83404628 None:intergenic
GATTGATGAGCACGTGCAAA+GGG 0.491741 4:+83404862 MsG0480023291.01.T01:intron
GGTAAATTCTTTAAGAACCA+AGG 0.513936 4:-83407470 None:intergenic
CATAGTCTGGAATTGAATAG+TGG 0.524092 4:-83407003 None:intergenic
AGCAGGGGATGGTCCAAAAG+TGG 0.538861 4:+83407594 MsG0480023291.01.T01:intron
AAGAAGAGAATATGATGGAA+AGG 0.550931 4:+83406627 MsG0480023291.01.T01:CDS
ATAGTGATGGAATATGCTGC+TGG 0.561046 4:+83405373 MsG0480023291.01.T01:CDS
CCCTGCTTACATTGCACCAG+AGG 0.562867 4:+83406597 MsG0480023291.01.T01:CDS
TTGTCAAGAAGAGAATATGA+TGG 0.570242 4:+83406622 MsG0480023291.01.T01:CDS
CCTCTGGTGCAATGTAAGCA+GGG 0.574763 4:-83406597 None:intergenic
GTAAATTCTTTAAGAACCAA+GGG 0.575172 4:-83407469 None:intergenic
AACTCATTTAGCAATAGTGA+TGG 0.581745 4:+83405360 MsG0480023291.01.T01:CDS
AGATTGATGAGCACGTGCAA+AGG 0.587475 4:+83404861 MsG0480023291.01.T01:intron
TGGTAGATTCAGTGAGGACG+AGG 0.590664 4:+83405426 MsG0480023291.01.T01:CDS
AAAGGGAGATTATAAATCAT+AGG 0.591024 4:+83404879 MsG0480023291.01.T01:CDS
GGCACAAACAAAATCACCGC+TGG 0.599584 4:-83407689 None:intergenic
TAGTGATGGAATATGCTGCT+GGG 0.616207 4:+83405374 MsG0480023291.01.T01:CDS
GCAGGGGATGGTCCAAAAGT+GGG 0.617182 4:+83407595 MsG0480023291.01.T01:intron
CCATCCTCCATAAATTCTAG+TGG 0.625026 4:-83407491 None:intergenic
TTTACCACTAGAATTTATGG+AGG 0.627871 4:+83407487 MsG0480023291.01.T01:CDS
CTCTGGTGCAATGTAAGCAG+GGG 0.628562 4:-83406596 None:intergenic
TGCAGATGTTTGGTCTTGTG+GGG 0.631552 4:+83406769 MsG0480023291.01.T01:CDS
AGTGATGGAATATGCTGCTG+GGG 0.649360 4:+83405375 MsG0480023291.01.T01:CDS
AGCAAGCATCATCATTCACA+AGG 0.656531 4:-83407710 None:intergenic
TCCCAGCCAAAATCAACTGT+AGG 0.671408 4:+83406571 MsG0480023291.01.T01:CDS
ATCGATGATATTGAAACCAG+CGG 0.674952 4:+83407673 MsG0480023291.01.T01:CDS
TACTGCTGGTAGATTCAGTG+AGG 0.692521 4:+83405420 MsG0480023291.01.T01:CDS
GTGATGGAATATGCTGCTGG+GGG 0.740026 4:+83405376 MsG0480023291.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAATATATTACGTAT+TGG - Chr4:83406949-83406968 None:intergenic 10.0%
!! AATTAAACATCATATATAAA+TGG - Chr4:83404822-83404841 None:intergenic 10.0%
!!! GTAATATATTAATTTTTTTC+TGG + Chr4:83406953-83406972 MsG0480023291.01.T01:intron 10.0%
!!! TTTTTTGTTTTATCAATTAT+TGG - Chr4:83406273-83406292 None:intergenic 10.0%
!! TATGAGATAATTAAAGATAT+TGG + Chr4:83404639-83404658 MsG0480023291.01.T01:CDS 15.0%
!! TCACTTTAATTAATTAATGA+TGG + Chr4:83407335-83407354 MsG0480023291.01.T01:intron 15.0%
!! TCTTTAAATCTAACAATATT+GGG - Chr4:83404917-83404936 None:intergenic 15.0%
!!! AAAAACATTTTAAATGAGTT+AGG + Chr4:83404952-83404971 MsG0480023291.01.T01:intron 15.0%
!!! ATGTTTAATTTAATTCCATT+CGG + Chr4:83404832-83404851 MsG0480023291.01.T01:intron 15.0%
!!! ATTTAACAATTCTTTTTCAA+TGG + Chr4:83406487-83406506 MsG0480023291.01.T01:intron 15.0%
!!! CATTATTACTTTTATAAAGT+TGG - Chr4:83405132-83405151 None:intergenic 15.0%
!!! GTATTCAAAATTTTAAATTG+CGG + Chr4:83407142-83407161 MsG0480023291.01.T01:intron 15.0%
!!! TTGATTTAATTAATTTGCTA+TGG + Chr4:83406900-83406919 MsG0480023291.01.T01:intron 15.0%
!! AAGAAAATGGAGTTAAAAAA+AGG - Chr4:83404755-83404774 None:intergenic 20.0%
!! ATAATTAAAGATATTGGATC+AGG + Chr4:83404645-83404664 MsG0480023291.01.T01:CDS 20.0%
!! CAAGTAATATATTAACAAGT+GGG + Chr4:83405500-83405519 MsG0480023291.01.T01:intron 20.0%
!! CAATATTGTTAGATTTAAAG+AGG + Chr4:83404916-83404935 MsG0480023291.01.T01:CDS 20.0%
!! CTCTTTAAATCTAACAATAT+TGG - Chr4:83404918-83404937 None:intergenic 20.0%
!! TAAAAGACGATAATAAATTG+TGG + Chr4:83407245-83407264 MsG0480023291.01.T01:intron 20.0%
!! TTAACGTTCTTTAAATATTG+AGG + Chr4:83407191-83407210 MsG0480023291.01.T01:intron 20.0%
!!! AAAAGTTTTCCAAAGATTTT+TGG - Chr4:83405286-83405305 None:intergenic 20.0%
!!! AAAATTGTTTTTACCTTATC+AGG - Chr4:83407082-83407101 None:intergenic 20.0%
!!! AAATTGTTTTTACCTTATCA+GGG - Chr4:83407081-83407100 None:intergenic 20.0%
!!! AAGTGTTTTTTTGAAGTTTT+TGG - Chr4:83406849-83406868 None:intergenic 20.0%
!!! AATATTGACTATAATTCAAG+AGG + Chr4:83407564-83407583 MsG0480023291.01.T01:intron 20.0%
!!! AGTGTTTTTTTGAAGTTTTT+GGG - Chr4:83406848-83406867 None:intergenic 20.0%
!!! TAAAACTTTAAGTTTATCTC+CGG - Chr4:83404991-83405010 None:intergenic 20.0%
!!! TTTGTTTTATCAATTATTGG+CGG - Chr4:83406270-83406289 None:intergenic 20.0%
!!! TTTTTTTAACTCCATTTTCT+TGG + Chr4:83404754-83404773 MsG0480023291.01.T01:intron 20.0%
!!! TTTTTTTTCTCCTTTCATAT+AGG + Chr4:83405706-83405725 MsG0480023291.01.T01:intron 20.0%
! AAACTTCAAAAAAACACTTC+AGG + Chr4:83406850-83406869 MsG0480023291.01.T01:CDS 25.0%
! AAAGGAATTCCAAAAATCTT+TGG + Chr4:83405274-83405293 MsG0480023291.01.T01:intron 25.0%
! AAAGGGAGATTATAAATCAT+AGG + Chr4:83404879-83404898 MsG0480023291.01.T01:CDS 25.0%
! AAATATCTTGCCTATATGAA+AGG - Chr4:83405719-83405738 None:intergenic 25.0%
! AATGGACATTTCATATGTAT+TGG - Chr4:83405318-83405337 None:intergenic 25.0%
! ATTGTACGACATTAATTTCA+AGG + Chr4:83407296-83407315 MsG0480023291.01.T01:intron 25.0%
! GAATTTACCACTAGAATTTA+TGG + Chr4:83407484-83407503 MsG0480023291.01.T01:CDS 25.0%
! GCAAGTAATATATTAACAAG+TGG + Chr4:83405499-83405518 MsG0480023291.01.T01:intron 25.0%
! TTGTACGACATTAATTTCAA+GGG + Chr4:83407297-83407316 MsG0480023291.01.T01:intron 25.0%
!! ATTTTAAATGAGTTAGGTTC+CGG + Chr4:83404958-83404977 MsG0480023291.01.T01:intron 25.0%
!! CGTCTTTTATAAGAAAAGTT+TGG - Chr4:83407234-83407253 None:intergenic 25.0%
!! GATTCTAGAAAACAGTAATT+AGG + Chr4:83405469-83405488 MsG0480023291.01.T01:intron 25.0%
!! GTAAATTCTTTAAGAACCAA+GGG - Chr4:83407472-83407491 None:intergenic 25.0%
!!! GTGTTTTTTTGAAGTTTTTG+GGG - Chr4:83406847-83406866 None:intergenic 25.0%
!!! TGATTTGTCAAACTGTTTTA+GGG + Chr4:83406136-83406155 MsG0480023291.01.T01:intron 25.0%
!!! TTGATTTGTCAAACTGTTTT+AGG + Chr4:83406135-83406154 MsG0480023291.01.T01:intron 25.0%
AACTCATTTAGCAATAGTGA+TGG + Chr4:83405360-83405379 MsG0480023291.01.T01:CDS 30.0%
ACATAGAAAGACCAAGAAAA+TGG - Chr4:83404768-83404787 None:intergenic 30.0%
ACTTTGTATGTTATGCTTGT+TGG + Chr4:83406794-83406813 MsG0480023291.01.T01:CDS 30.0%
AGCTCAAAGAAAATAACACA+TGG - Chr4:83405055-83405074 None:intergenic 30.0%
ATCACTATTGCTAAATGAGT+TGG - Chr4:83405361-83405380 None:intergenic 30.0%
CAAAGCTTATAAGGGAAAAA+TGG + Chr4:83404682-83404701 MsG0480023291.01.T01:CDS 30.0%
CACAAGAAAAAAAAAACGTG+TGG + Chr4:83406684-83406703 MsG0480023291.01.T01:intron 30.0%
TTATTGTGCATTTGATCGAT+CGG + Chr4:83406068-83406087 MsG0480023291.01.T01:intron 30.0%
TTGTCAAGAAGAGAATATGA+TGG + Chr4:83406622-83406641 MsG0480023291.01.T01:CDS 30.0%
TTTACCACTAGAATTTATGG+AGG + Chr4:83407487-83407506 MsG0480023291.01.T01:CDS 30.0%
TTTGAAAGAATTTGTACTGC+TGG + Chr4:83405406-83405425 MsG0480023291.01.T01:CDS 30.0%
! AAAAGCTATCATTTTCTTGC+AGG + Chr4:83405845-83405864 MsG0480023291.01.T01:intron 30.0%
! AAGAAGAGAATATGATGGAA+AGG + Chr4:83406627-83406646 MsG0480023291.01.T01:CDS 30.0%
! GGTAAATTCTTTAAGAACCA+AGG - Chr4:83407473-83407492 None:intergenic 30.0%
! TCAAAATTTTAAATTGCGGC+TGG + Chr4:83407146-83407165 MsG0480023291.01.T01:intron 30.0%
! TCACTCTTAGAATTTGCTTT+AGG - Chr4:83406360-83406379 None:intergenic 30.0%
!! GATTTGTCAAACTGTTTTAG+GGG + Chr4:83406137-83406156 MsG0480023291.01.T01:intron 30.0%
!! TTTCTAGCTTAAGATCTCTA+TGG - Chr4:83405878-83405897 None:intergenic 30.0%
!!! GATTTTTGGAATTCCTTTCA+AGG - Chr4:83405272-83405291 None:intergenic 30.0%
!!! GTGTTTTTTAATCTCTGGTA+TGG - Chr4:83407450-83407469 None:intergenic 30.0%
!!! GTTTTTGTTTTCTCCTTGAA+AGG + Chr4:83405256-83405275 MsG0480023291.01.T01:intron 30.0%
AACAATATTGGGATGCTTCA+AGG - Chr4:83404906-83404925 None:intergenic 35.0%
ACAACAGTGATACCATTGAA+TGG - Chr4:83405775-83405794 None:intergenic 35.0%
ATCGATGATATTGAAACCAG+CGG + Chr4:83407673-83407692 MsG0480023291.01.T01:CDS 35.0%
ATGAAATGTCCATTCATTGC+AGG + Chr4:83405324-83405343 MsG0480023291.01.T01:intron 35.0%
ATGTGACTTTGGTTACTCAA+AGG + Chr4:83405938-83405957 MsG0480023291.01.T01:intron 35.0%
CAACTTGCATGTGAGATAAA+AGG - Chr4:83406222-83406241 None:intergenic 35.0%
CAGAGATTAAAAAACACCCT+TGG + Chr4:83407453-83407472 MsG0480023291.01.T01:CDS 35.0%
CATCAATCTACAAAACCGAA+TGG - Chr4:83404850-83404869 None:intergenic 35.0%
CCATACTTCCACCAAAAAAT+TGG - Chr4:83407624-83407643 None:intergenic 35.0%
CGACTCAAAATATGTGACTT+TGG + Chr4:83405927-83405946 MsG0480023291.01.T01:intron 35.0%
CTAGAAAACACACTTCTAGA+TGG + Chr4:83405891-83405910 MsG0480023291.01.T01:intron 35.0%
CTTATAAGGGAAAAATGGAG+TGG + Chr4:83404687-83404706 MsG0480023291.01.T01:CDS 35.0%
GATATTGGATCAGGTAACTT+TGG + Chr4:83404654-83404673 MsG0480023291.01.T01:CDS 35.0%
GTGATTAGATTGCAGATGTT+TGG + Chr4:83406759-83406778 MsG0480023291.01.T01:intron 35.0%
GTTCATTGAAAGAGGCTTTA+AGG + Chr4:83404728-83404747 MsG0480023291.01.T01:CDS 35.0%
TGAGATAAAAGGTTGTGTTG+CGG - Chr4:83406211-83406230 None:intergenic 35.0%
TGGTTATGTATGTTACACCA+GGG - Chr4:83406929-83406948 None:intergenic 35.0%
TTATGGAGGATGGTGAAAAT+TGG + Chr4:83407501-83407520 MsG0480023291.01.T01:intron 35.0%
TTGGTTATGTATGTTACACC+AGG - Chr4:83406930-83406949 None:intergenic 35.0%
! CATAGTCTGGAATTGAATAG+TGG - Chr4:83407006-83407025 None:intergenic 35.0%
! CTAGTCTGAAATGTTGAGTT+AGG - Chr4:83407116-83407135 None:intergenic 35.0%
! TGCAACAATTTGTTTCGTCA+TGG + Chr4:83405612-83405631 MsG0480023291.01.T01:intron 35.0%
! TTTGCTTTAGGCCTCAAAAT+TGG - Chr4:83406348-83406367 None:intergenic 35.0%
!! AAGTCACATATTTTGAGTCG+TGG - Chr4:83405927-83405946 None:intergenic 35.0%
!! TGGTGTTGCAAAGCTTATAA+GGG + Chr4:83404674-83404693 MsG0480023291.01.T01:CDS 35.0%
!! TGTTTTTACCTTATCAGGGT+TGG - Chr4:83407077-83407096 None:intergenic 35.0%
!! TTGGTGTTGCAAAGCTTATA+AGG + Chr4:83404673-83404692 MsG0480023291.01.T01:CDS 35.0%
!!! CAAGGGTGTTTTTTAATCTC+TGG - Chr4:83407455-83407474 None:intergenic 35.0%
!!! CCAATTTTTTGGTGGAAGTA+TGG + Chr4:83407621-83407640 MsG0480023291.01.T01:CDS 35.0%
AGTCAGCTATTGCCATTCAA+TGG + Chr4:83405760-83405779 MsG0480023291.01.T01:intron 40.0%
ATTCAAGAGGCTATGAAAGC+AGG + Chr4:83407577-83407596 MsG0480023291.01.T01:intron 40.0%
CATACACAGATACACGACAT+AGG + Chr4:83406013-83406032 MsG0480023291.01.T01:intron 40.0%
CCACTAGAATTTATGGAGGA+TGG + Chr4:83407491-83407510 MsG0480023291.01.T01:CDS 40.0%
CCATCCTCCATAAATTCTAG+TGG - Chr4:83407494-83407513 None:intergenic 40.0%
CTGCAATCTAATCACTCTCA+AGG - Chr4:83406754-83406773 None:intergenic 40.0%
GCTGTCAAGTTCATTGAAAG+AGG + Chr4:83404720-83404739 MsG0480023291.01.T01:CDS 40.0%
GGTTATGTATGTTACACCAG+GGG - Chr4:83406928-83406947 None:intergenic 40.0%
TCTCTTCTTGACAATACCTC+TGG - Chr4:83406616-83406635 None:intergenic 40.0%
TGAGTAATGCGAACATAGTC+TGG - Chr4:83407019-83407038 None:intergenic 40.0%
TTCAAGAGGCTATGAAAGCA+GGG + Chr4:83407578-83407597 MsG0480023291.01.T01:intron 40.0%
! AAAAATTGGTCGCCCACTTT+TGG - Chr4:83407610-83407629 None:intergenic 40.0%
! ATAGTGATGGAATATGCTGC+TGG + Chr4:83405373-83405392 MsG0480023291.01.T01:CDS 40.0%
! ATTTGTTGCCAACCCTGATA+AGG + Chr4:83407066-83407085 MsG0480023291.01.T01:CDS 40.0%
! TAGTGATGGAATATGCTGCT+GGG + Chr4:83405374-83405393 MsG0480023291.01.T01:CDS 40.0%
! TTCTTCCAGCAACTGATTTC+TGG + Chr4:83405737-83405756 MsG0480023291.01.T01:intron 40.0%
!! ATTGCAGATGTTTGGTCTTG+TGG + Chr4:83406767-83406786 MsG0480023291.01.T01:CDS 40.0%
!! TTAATTTGCTATGGTACCCC+TGG + Chr4:83406909-83406928 MsG0480023291.01.T01:intron 40.0%
!! TTCCTACAGTTGATTTTGGC+TGG - Chr4:83406576-83406595 None:intergenic 40.0%
!! TTGCAGATGTTTGGTCTTGT+GGG + Chr4:83406768-83406787 MsG0480023291.01.T01:CDS 40.0%
!!! AAAGTGGGCGACCAATTTTT+TGG + Chr4:83407610-83407629 MsG0480023291.01.T01:CDS 40.0%
!!! TCCTACAGTTGATTTTGGCT+GGG - Chr4:83406575-83406594 None:intergenic 40.0%
!!! TTGAAGTTTTTGGGGTCTTC+TGG - Chr4:83406839-83406858 None:intergenic 40.0%
!!! TTGTCAAACTGTTTTAGGGG+CGG + Chr4:83406140-83406159 MsG0480023291.01.T01:intron 40.0%
ACAACTAGACCAACCTGGAT+CGG - Chr4:83407172-83407191 None:intergenic 45.0%
AGATTGATGAGCACGTGCAA+AGG + Chr4:83404861-83404880 MsG0480023291.01.T01:intron 45.0%
CGTTAACAACTAGACCAACC+TGG - Chr4:83407177-83407196 None:intergenic 45.0%
GATTGATGAGCACGTGCAAA+GGG + Chr4:83404862-83404881 MsG0480023291.01.T01:intron 45.0%
GGCCTCAAAATTGGTTGAGA+CGG - Chr4:83406339-83406358 None:intergenic 45.0%
GGGTCTTCTGGATCTTCAAA+AGG - Chr4:83406827-83406846 None:intergenic 45.0%
TACTGCTGGTAGATTCAGTG+AGG + Chr4:83405420-83405439 MsG0480023291.01.T01:CDS 45.0%
TCAAGAGGCTATGAAAGCAG+GGG + Chr4:83407579-83407598 MsG0480023291.01.T01:intron 45.0%
TCAGCAACACCTGCAATGAA+TGG - Chr4:83405336-83405355 None:intergenic 45.0%
TCCCAGCCAAAATCAACTGT+AGG + Chr4:83406571-83406590 MsG0480023291.01.T01:CDS 45.0%
TGACTCCAGAAATCAGTTGC+TGG - Chr4:83405745-83405764 None:intergenic 45.0%
! AGTGATGGAATATGCTGCTG+GGG + Chr4:83405375-83405394 MsG0480023291.01.T01:CDS 45.0%
! GTCCGTCTCAACCAATTTTG+AGG + Chr4:83406334-83406353 MsG0480023291.01.T01:intron 45.0%
!! GGGGTTCCTACAGTTGATTT+TGG - Chr4:83406580-83406599 None:intergenic 45.0%
!! TGCAGATGTTTGGTCTTGTG+GGG + Chr4:83406769-83406788 MsG0480023291.01.T01:CDS 45.0%
!!! TGTCAAACTGTTTTAGGGGC+GGG + Chr4:83406141-83406160 MsG0480023291.01.T01:intron 45.0%
!! CATAAAAATATTAAAATTTA+TGG - Chr4:83405594-83405613 None:intergenic 5.0%
ACCTCTGGTGCAATGTAAGC+AGG - Chr4:83406601-83406620 None:intergenic 50.0%
CCTCTGGTGCAATGTAAGCA+GGG - Chr4:83406600-83406619 None:intergenic 50.0%
CTCTGGTGCAATGTAAGCAG+GGG - Chr4:83406599-83406618 None:intergenic 50.0%
GGCACAAACAAAATCACCGC+TGG - Chr4:83407692-83407711 None:intergenic 50.0%
GGTTGTGTTGCGGTTTAGTG+AGG - Chr4:83406201-83406220 None:intergenic 50.0%
GTTTATCTCCGGTGAGCTTC+CGG - Chr4:83404980-83404999 None:intergenic 50.0%
TGGTAGATTCAGTGAGGACG+AGG + Chr4:83405426-83405445 MsG0480023291.01.T01:CDS 50.0%
! GTGATGGAATATGCTGCTGG+GGG + Chr4:83405376-83405395 MsG0480023291.01.T01:CDS 50.0%
!!! GTGGGCGACCAATTTTTTGG+TGG + Chr4:83407613-83407632 MsG0480023291.01.T01:CDS 50.0%
AGCAGGGGATGGTCCAAAAG+TGG + Chr4:83407594-83407613 MsG0480023291.01.T01:intron 55.0%
CCCTGCTTACATTGCACCAG+AGG + Chr4:83406597-83406616 MsG0480023291.01.T01:CDS 55.0%
GAGGCTATGAAAGCAGGGGA+TGG + Chr4:83407583-83407602 MsG0480023291.01.T01:intron 55.0%
GCAGGGGATGGTCCAAAAGT+GGG + Chr4:83407595-83407614 MsG0480023291.01.T01:intron 55.0%
GTTAGGTTCCGGAAGCTCAC+CGG + Chr4:83404969-83404988 MsG0480023291.01.T01:intron 55.0%
! AAATTGCGGCTGGCCGATCC+AGG + Chr4:83407156-83407175 MsG0480023291.01.T01:intron 60.0%
! TGCGGCTGGCCGATCCAGGT+TGG + Chr4:83407160-83407179 MsG0480023291.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 83404630 83407717 83404630 ID=MsG0480023291.01;Name=MsG0480023291.01
Chr4 mRNA 83404630 83407717 83404630 ID=MsG0480023291.01.T01;Parent=MsG0480023291.01;Name=MsG0480023291.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|8|0|261
Chr4 exon 83404630 83404749 83404630 ID=MsG0480023291.01.T01:exon:1082;Parent=MsG0480023291.01.T01
Chr4 exon 83404863 83404937 83404863 ID=MsG0480023291.01.T01:exon:1083;Parent=MsG0480023291.01.T01
Chr4 exon 83405346 83405447 83405346 ID=MsG0480023291.01.T01:exon:1084;Parent=MsG0480023291.01.T01
Chr4 exon 83406556 83406648 83406556 ID=MsG0480023291.01.T01:exon:1085;Parent=MsG0480023291.01.T01
Chr4 exon 83406767 83406871 83406767 ID=MsG0480023291.01.T01:exon:1086;Parent=MsG0480023291.01.T01
Chr4 exon 83406989 83407087 83406989 ID=MsG0480023291.01.T01:exon:1087;Parent=MsG0480023291.01.T01
Chr4 exon 83407440 83407512 83407440 ID=MsG0480023291.01.T01:exon:1088;Parent=MsG0480023291.01.T01
Chr4 exon 83407599 83407717 83407599 ID=MsG0480023291.01.T01:exon:1089;Parent=MsG0480023291.01.T01
Chr4 CDS 83404630 83404749 83404630 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83404863 83404937 83404863 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83405346 83405447 83405346 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83406556 83406648 83406556 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83406767 83406871 83406767 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83406989 83407087 83406989 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83407440 83407512 83407440 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Chr4 CDS 83407599 83407717 83407599 ID=MsG0480023291.01.T01:cds;Parent=MsG0480023291.01.T01
Gene Sequence

>MsG0480023291.01.T01

ATGGAACGATATGAGATAATTAAAGATATTGGATCAGGTAACTTTGGTGTTGCAAAGCTTATAAGGGAAAAATGGAGTGGCGAGTTATATGCTGTCAAGTTCATTGAAAGAGGCTTTAAGATTGATGAGCACGTGCAAAGGGAGATTATAAATCATAGGTCCTTGAAGCATCCCAATATTGTTAGATTTAAAGAGGTGTTGCTGACTCCAACTCATTTAGCAATAGTGATGGAATATGCTGCTGGGGGAGAACTATTTGAAAGAATTTGTACTGCTGGTAGATTCAGTGAGGACGAGTCATCTGTTCTACACTCCCAGCCAAAATCAACTGTAGGAACCCCTGCTTACATTGCACCAGAGGTATTGTCAAGAAGAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGGGTAACTTTGTATGTTATGCTTGTTGGTGCTTATCCTTTTGAAGATCCAGAAGACCCCAAAAACTTCAAAAAAACACTTCAGCGAATTCTTAGTGTCCACTATTCAATTCCAGACTATGTTCGCATTACTCAAGAGTGCAGACATCTTTTATCTAGAATATTTGTTGCCAACCCTGATAAGAGAATTACCATACCAGAGATTAAAAAACACCCTTGGTTCTTAAAGAATTTACCACTAGAATTTATGGAGGATGGGGATGGTCCAAAAGTGGGCGACCAATTTTTTGGTGGAAGTATGGATTTTGATGATTTAGATACAGATGCTGACATCGATGATATTGAAACCAGCGGTGATTTTGTTTGTGCCTTGTGA

Protein sequence

>MsG0480023291.01.T01

MERYEIIKDIGSGNFGVAKLIREKWSGELYAVKFIERGFKIDEHVQREIINHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICTAGRFSEDESSVLHSQPKSTVGTPAYIAPEVLSRREYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFKKTLQRILSVHYSIPDYVRITQECRHLLSRIFVANPDKRITIPEIKKHPWFLKNLPLEFMEDGDGPKVGDQFFGGSMDFDDLDTDADIDDIETSGDFVCAL*