AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042027.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042027.01.T01 MTR_8g009770 98.383 433 7 0 1 433 1 433 0.0 871
MsG0880042027.01.T01 MTR_3g110630 39.207 454 239 12 1 427 1 444 4.38e-91 283
MsG0880042027.01.T01 MTR_6g090060 38.636 440 229 11 1 427 1 412 3.69e-85 267
MsG0880042027.01.T01 MTR_5g005420 36.283 452 230 12 1 430 1 416 4.81e-79 251
MsG0880042027.01.T01 MTR_8g102270 39.763 337 162 10 95 427 53 352 6.45e-58 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042027.01.T01 AT5G17640 73.113 424 104 6 1 420 1 418 0.0 598
MsG0880042027.01.T01 AT1G10020 39.262 461 238 13 1 427 1 453 1.14e-90 282
MsG0880042027.01.T01 AT4G29310 39.863 439 226 10 1 427 1 413 5.81e-90 279
MsG0880042027.01.T01 AT3G19680 34.747 495 246 13 1 430 1 483 1.09e-73 239
MsG0880042027.01.T01 AT1G50040 36.229 472 241 15 1 431 1 453 1.54e-67 222
MsG0880042027.01.T01 AT4G29310 38.806 335 182 8 1 323 1 324 2.66e-61 202

Find 136 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTACTCATTTCAGCTTT+TGG 0.238301 8:+2799993 MsG0880042027.01.T01:five_prime_UTR
GGTTTCCCTTCACCCCATTC+AGG 0.245825 8:-2802233 None:intergenic
TTTCAATGTTGCTGTGCTTT+TGG 0.250928 8:-2799810 None:intergenic
TTCCATCTTCAGGTTGTGAT+TGG 0.257792 8:+2803615 MsG0880042027.01.T01:CDS
GGAATTCAACACTGCTATAA+AGG 0.273384 8:+2800014 MsG0880042027.01.T01:five_prime_UTR
ACTCCATTTGTTCCATCTTC+AGG 0.295514 8:+2803605 MsG0880042027.01.T01:CDS
TGGATCCCCAGGCCTTTATT+AGG 0.311476 8:+2801859 MsG0880042027.01.T01:CDS
TAGGTTGTCGATAGGCTCTC+TGG 0.312333 8:+2801878 MsG0880042027.01.T01:CDS
ACCAAAGTCTCCGCTACTTT+GGG 0.330454 8:-2803915 None:intergenic
GAACTGAACACTGGAAAATC+TGG 0.342355 8:+2801921 MsG0880042027.01.T01:CDS
CTATAATCCTCATGCATGTT+TGG 0.342455 8:+2802121 MsG0880042027.01.T01:CDS
GATCAGTTGTGACAAGTATA+TGG 0.350882 8:+2801839 MsG0880042027.01.T01:exon
ATTGTGGAGTTGGTGTTAAA+AGG 0.354539 8:+2802177 MsG0880042027.01.T01:CDS
TTTGGTTGCAAATGCTTTGT+AGG 0.376814 8:-2799792 None:intergenic
CTAAACTTGCAACTGAAGAT+TGG 0.389372 8:-2802434 None:intergenic
TCCCCACGGCTGCCAGCTCT+CGG 0.391454 8:-2803696 None:intergenic
CTTCAGTTGCAAGTTTAGTA+AGG 0.396399 8:+2802439 MsG0880042027.01.T01:CDS
GCCTATCGACAACCTAATAA+AGG 0.397474 8:-2801871 None:intergenic
CGCAATGCCAGCTGTACTAA+TGG 0.400497 8:-2804007 None:intergenic
GTCATGAGCTGTAGAGTTCA+AGG 0.402802 8:+2803965 MsG0880042027.01.T01:CDS
CACCAAAGTCTCCGCTACTT+TGG 0.403157 8:-2803916 None:intergenic
CTACTTTGGGGACTAGGTAT+TGG 0.403650 8:-2803902 None:intergenic
TTTAACGGATGGACAGGTAT+TGG 0.405863 8:+2802266 MsG0880042027.01.T01:CDS
TCTCCGCTACTTTGGGGACT+AGG 0.411180 8:-2803908 None:intergenic
CGGGGAGGAGAGAGAGAAAA+GGG 0.413961 8:+2803525 MsG0880042027.01.T01:CDS
TCGGGGAGGAGAGAGAGAAA+AGG 0.415178 8:+2803524 MsG0880042027.01.T01:CDS
AATTCATATAAATGCCGAAA+AGG 0.425545 8:+2803820 MsG0880042027.01.T01:CDS
GACATTTCTGACTTAGAATC+GGG 0.427448 8:+2803506 MsG0880042027.01.T01:CDS
ACCCTCTTCTGATCTTCCTT+CGG 0.427964 8:-2804114 None:intergenic
TTTAACTTTCAAATGCAATT+CGG 0.430158 8:-2802321 None:intergenic
TGACATTTCTGACTTAGAAT+CGG 0.431555 8:+2803505 MsG0880042027.01.T01:CDS
AAATGCAGGTTGGCCCTGAA+TGG 0.434195 8:+2802219 MsG0880042027.01.T01:CDS
GGAAGATCAGAAGAGGGTTT+CGG 0.438177 8:+2804119 MsG0880042027.01.T01:CDS
GGAGGATGCTGCCATCTTCA+TGG 0.442367 8:+2804045 MsG0880042027.01.T01:CDS
GTGAAGATACATGATCTATC+TGG 0.443249 8:+2803554 MsG0880042027.01.T01:CDS
CAACCTGAAGATGGAACAAA+TGG 0.444232 8:-2803608 None:intergenic
TTCAAATGCAATTCGGCACC+TGG 0.448516 8:-2802314 None:intergenic
TCCCTTCTTCCCTGAAAATA+CGG 0.451160 8:-2802150 None:intergenic
CATGAGAACTGTGGCTTCTA+CGG 0.453039 8:+2803874 MsG0880042027.01.T01:CDS
ATGACAAAACCTCCAACAAC+CGG 0.455042 8:-2803947 None:intergenic
GCACAGCAACATTGAAAGAA+TGG 0.457187 8:+2799816 MsG0880042027.01.T01:five_prime_UTR
CGAACAATCAACCAAGCTCC+TGG 0.461063 8:-2803653 None:intergenic
AGACTTTGGTGCACTGAGTC+CGG 0.461560 8:+2803928 MsG0880042027.01.T01:CDS
TTAAAAGCGTTGTTAGCTCC+TGG 0.463507 8:+2802092 MsG0880042027.01.T01:CDS
TATTTGACAAACAAGGCTAA+TGG 0.468098 8:+2804147 MsG0880042027.01.T01:exon
ACAAACAAGGCTAATGGTAA+TGG 0.472418 8:+2804153 MsG0880042027.01.T01:exon
TCCATCTTCAGGTTGTGATT+GGG 0.472477 8:+2803616 MsG0880042027.01.T01:CDS
GGGACTGATGATGTTTGAAC+AGG 0.472804 8:-2801996 None:intergenic
GGTGCACTGAGTCCGGTTGT+TGG 0.478743 8:+2803935 MsG0880042027.01.T01:CDS
CGACAACCTAATAAAGGCCT+GGG 0.480173 8:-2801865 None:intergenic
TCGACAACCTAATAAAGGCC+TGG 0.481266 8:-2801866 None:intergenic
GTTTCCCTTCACCCCATTCA+GGG 0.481666 8:-2802232 None:intergenic
CCCCAAAGTAGCGGAGACTT+TGG 0.482551 8:+2803914 MsG0880042027.01.T01:CDS
GATCCGAGAGCTGGCAGCCG+TGG 0.487143 8:+2803693 MsG0880042027.01.T01:CDS
AACTTCGGCAGAGGTTATCA+AGG 0.487315 8:-2802018 None:intergenic
ATTGCCTCCATCTTGAGGTT+CGG 0.487757 8:-2803783 None:intergenic
GCAAAATTGATACTTGAAGA+AGG 0.488246 8:-2799974 None:intergenic
GAGAGAGAGAAAAGGGTGGA+AGG 0.491297 8:+2803532 MsG0880042027.01.T01:CDS
CAAAATTGATACTTGAAGAA+GGG 0.494701 8:-2799973 None:intergenic
TGGCAAGCCATTAGTACAGC+TGG 0.494897 8:+2804000 MsG0880042027.01.T01:CDS
CTTCTGATCTTCCTTCGGAA+AGG 0.500164 8:-2804109 None:intergenic
CTCGTTGAGCACATACTGGT+CGG 0.500573 8:+2803475 MsG0880042027.01.T01:CDS
TGCCGCAAGTGCCATGAAGA+TGG 0.500784 8:-2804056 None:intergenic
GTTGGCCCTGAATGGGGTGA+AGG 0.501092 8:+2802227 MsG0880042027.01.T01:CDS
AAGGGATCTCATTGTGGAGT+TGG 0.502031 8:+2802167 MsG0880042027.01.T01:CDS
TCGGATCTACCAACCACATC+GGG 0.502382 8:-2803677 None:intergenic
CAAGATCCAACCCAGGAGCT+TGG 0.503040 8:+2803642 MsG0880042027.01.T01:CDS
AGGTATTGGCAAGAACAAAC+AGG 0.506986 8:+2802280 MsG0880042027.01.T01:CDS
CTTGAGGTTCGGATAGAAGA+TGG 0.507376 8:-2803772 None:intergenic
GTTGCAAGTTTAGTAAGGAC+AGG 0.508269 8:+2802444 MsG0880042027.01.T01:CDS
ATTCATATAAATGCCGAAAA+GGG 0.511316 8:+2803821 MsG0880042027.01.T01:CDS
AATGCAGGTTGGCCCTGAAT+GGG 0.514543 8:+2802220 MsG0880042027.01.T01:CDS
ACCCAATCACAACCTGAAGA+TGG 0.516099 8:-2803617 None:intergenic
GCCTTTATTAGGTTGTCGAT+AGG 0.516364 8:+2801870 MsG0880042027.01.T01:CDS
GTTTGTGAGATACGACTTCG+AGG 0.518240 8:+2801969 MsG0880042027.01.T01:CDS
AAAATTGATACTTGAAGAAG+GGG 0.523445 8:-2799972 None:intergenic
AAAGAATGGAGACAGATTTG+TGG 0.528079 8:+2799830 MsG0880042027.01.T01:five_prime_UTR
TCTCTGGGTTTGAGAAGTAC+TGG 0.531608 8:+2801894 MsG0880042027.01.T01:CDS
AAACAGGAGAACGGAAAACC+AGG 0.532501 8:+2802296 MsG0880042027.01.T01:CDS
CTTGAAGCATGGCGCGAGCG+TGG 0.532811 8:+2803722 MsG0880042027.01.T01:CDS
ATCCGAGAGCTGGCAGCCGT+GGG 0.537636 8:+2803694 MsG0880042027.01.T01:CDS
GGTGTTAAAAGGCAGCAAAT+CGG 0.539455 8:+2802188 MsG0880042027.01.T01:CDS
AGGTTGTCGATAGGCTCTCT+GGG 0.543318 8:+2801879 MsG0880042027.01.T01:CDS
TTGGCCCTGAATGGGGTGAA+GGG 0.544814 8:+2802228 MsG0880042027.01.T01:CDS
TTGACTCGTTGAGCACATAC+TGG 0.554206 8:+2803471 MsG0880042027.01.T01:CDS
CTTCTATCCGAACCTCAAGA+TGG 0.556068 8:+2803776 MsG0880042027.01.T01:CDS
TCGTTGAGCACATACTGGTC+GGG 0.560757 8:+2803476 MsG0880042027.01.T01:CDS
TGACAAGTATATGGATCCCC+AGG 0.561569 8:+2801848 MsG0880042027.01.T01:exon
AGAAGATTGCCTCCATCTTG+AGG 0.562373 8:-2803788 None:intergenic
GATTCTAAGTCAGAAATGTC+AGG 0.563508 8:-2803503 None:intergenic
AATCAACCAAGCTCCTGGGT+TGG 0.563544 8:-2803648 None:intergenic
GGAGGAGAGAGAGAAAAGGG+TGG 0.566007 8:+2803528 MsG0880042027.01.T01:CDS
TGCCATCTTCATGGCACTTG+CGG 0.566182 8:+2804054 MsG0880042027.01.T01:CDS
AGCTGTAGAGTTCAAGGTGA+AGG 0.578146 8:+2803971 MsG0880042027.01.T01:CDS
GCACTGAGTCCGGTTGTTGG+AGG 0.582970 8:+2803938 MsG0880042027.01.T01:CDS
TGGTTGGTAGATCCGAGAGC+TGG 0.587077 8:+2803684 MsG0880042027.01.T01:CDS
CATGCTTCAAGCTTTCCCCA+CGG 0.589453 8:-2803710 None:intergenic
GGAACTCTATTTGACAAACA+AGG 0.593032 8:+2804140 MsG0880042027.01.T01:exon
ACTGGAATTGAACTGAACAC+TGG 0.594978 8:+2801912 MsG0880042027.01.T01:CDS
CGTGGGGAAAGCTTGAAGCA+TGG 0.596348 8:+2803711 MsG0880042027.01.T01:CDS
AGATCACGAGGACAAGAAGA+AGG 0.597587 8:-2799883 None:intergenic
ATCACGTATAACTTCGGCAG+AGG 0.604581 8:-2802027 None:intergenic
GGCAAGAACAAACAGGAGAA+CGG 0.605160 8:+2802287 MsG0880042027.01.T01:CDS
CATATAAATGCCGAAAAGGG+TGG 0.606361 8:+2803824 MsG0880042027.01.T01:CDS
GAACAATCAACCAAGCTCCT+GGG 0.607466 8:-2803652 None:intergenic
TTCCGAAGGAAGATCAGAAG+AGG 0.608044 8:+2804112 MsG0880042027.01.T01:CDS
CTGTGTATCACGTATAACTT+CGG 0.610865 8:-2802033 None:intergenic
TCCGAAGGAAGATCAGAAGA+GGG 0.612207 8:+2804113 MsG0880042027.01.T01:CDS
ATTGTTCGTCCCGATGTGGT+TGG 0.613008 8:+2803668 MsG0880042027.01.T01:CDS
AACAAATGGAGTTGTTATGA+AGG 0.614304 8:-2803594 None:intergenic
CTGAGAGTGCACAGATCACG+AGG 0.620566 8:-2799895 None:intergenic
GCTTGCATGCCTCAATGCTG+AGG 0.626470 8:-2804087 None:intergenic
AGCTGTTGACCTCAGCATTG+AGG 0.627543 8:+2804078 MsG0880042027.01.T01:CDS
ACTTCGGCAGAGGTTATCAA+GGG 0.632357 8:-2802017 None:intergenic
CCTCAGATAGTTCTGCTGCA+AGG 0.634975 8:+2802398 MsG0880042027.01.T01:CDS
AGGCATGCAAGCCTTTCCGA+AGG 0.638060 8:+2804098 MsG0880042027.01.T01:CDS
CTCGGATCTACCAACCACAT+CGG 0.640213 8:-2803678 None:intergenic
GGGAAGAAGGGATCTCATTG+TGG 0.645030 8:+2802161 MsG0880042027.01.T01:CDS
CCAAAGTCTCCGCTACTTTG+GGG 0.645734 8:-2803914 None:intergenic
CCTTGCAGCAGAACTATCTG+AGG 0.650920 8:-2802398 None:intergenic
GTTGATTGTTCGTCCCGATG+TGG 0.653420 8:+2803664 MsG0880042027.01.T01:CDS
CTATCCGAACCTCAAGATGG+AGG 0.654553 8:+2803779 MsG0880042027.01.T01:CDS
TAGTACCATAGATAAAATGA+CGG 0.658183 8:+2801817 MsG0880042027.01.T01:five_prime_UTR
ATACCTAGTCCCCAAAGTAG+CGG 0.662442 8:+2803905 MsG0880042027.01.T01:CDS
TCCGAGAGCTGGCAGCCGTG+GGG 0.668783 8:+2803695 MsG0880042027.01.T01:CDS
GCGATCTCCAAACATGCATG+AGG 0.673993 8:-2802128 None:intergenic
ATTGCGACACGTGACGTGCG+TGG 0.677610 8:+2804024 MsG0880042027.01.T01:CDS
ATGCAGGTTGGCCCTGAATG+GGG 0.680133 8:+2802221 MsG0880042027.01.T01:CDS
TTTCTGACTTAGAATCGGGG+AGG 0.692661 8:+2803510 MsG0880042027.01.T01:CDS
GTTCAAGGTGAAGGAAAGCG+TGG 0.694457 8:+2803980 MsG0880042027.01.T01:CDS
TGAGGATTATAGAAACAACC+AGG 0.699777 8:-2802110 None:intergenic
TGGGTTGCAAGATCCAACCC+AGG 0.701236 8:+2803635 MsG0880042027.01.T01:CDS
ACATTTCTGACTTAGAATCG+GGG 0.708791 8:+2803507 MsG0880042027.01.T01:CDS
CTTCGGCAGAGGTTATCAAG+GGG 0.718907 8:-2802016 None:intergenic
GACAACCTAATAAAGGCCTG+GGG 0.731055 8:-2801864 None:intergenic
GCGACACGTGACGTGCGTGG+AGG 0.761972 8:+2804027 MsG0880042027.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTACAGAAAATAA+GGG - Chr8:2801047-2801066 None:intergenic 10.0%
!! TAATTTAATTACAGAAAATA+AGG - Chr8:2801048-2801067 None:intergenic 10.0%
!! TACATGTATAAAAAATTAAA+AGG - Chr8:2800110-2800129 None:intergenic 10.0%
!! TTAAATTAAATTTCAAAACA+AGG + Chr8:2801060-2801079 MsG0880042027.01.T01:intron 10.0%
!! AAAAAGAGTTAAATAACTTA+TGG - Chr8:2800877-2800896 None:intergenic 15.0%
!! AAAAGAGTTAAATAACTTAT+GGG - Chr8:2800876-2800895 None:intergenic 15.0%
!! CAATAATACTATATGTATAT+CGG - Chr8:2801254-2801273 None:intergenic 15.0%
!! TTTGCAACAAAAAAAAAAAA+TGG + Chr8:2802726-2802745 MsG0880042027.01.T01:intron 15.0%
!!! AAAAAAACTGATTTTTCTTT+AGG - Chr8:2803272-2803291 None:intergenic 15.0%
!!! AAAAAACTGATTTTTCTTTA+GGG - Chr8:2803271-2803290 None:intergenic 15.0%
!!! ACTTTTTTTTTTCTTATCTA+TGG + Chr8:2801396-2801415 MsG0880042027.01.T01:intron 15.0%
!!! CTTTTTTTTTTCTTATCTAT+GGG + Chr8:2801397-2801416 MsG0880042027.01.T01:intron 15.0%
!!! TAAAAGTACAAACTTTATTT+TGG + Chr8:2803128-2803147 MsG0880042027.01.T01:intron 15.0%
!!! TTCTTTTTTGTAAATTATGT+TGG + Chr8:2800466-2800485 MsG0880042027.01.T01:intron 15.0%
!!! TTTTCTAACATTTCATTTAT+TGG + Chr8:2801217-2801236 MsG0880042027.01.T01:intron 15.0%
!! AAAGAGTTAAATAACTTATG+GGG - Chr8:2800875-2800894 None:intergenic 20.0%
!! AATACACGATAAAGTTAATT+TGG + Chr8:2802925-2802944 MsG0880042027.01.T01:intron 20.0%
!!! AAAAAGAATGGATTTTTAAG+TGG - Chr8:2800070-2800089 None:intergenic 20.0%
!!! AAAGTGACTAATTTTATAGT+AGG - Chr8:2802681-2802700 None:intergenic 20.0%
!!! AAGTGACTAATTTTATAGTA+GGG - Chr8:2802680-2802699 None:intergenic 20.0%
!!! GTTTTCTCAAATTTAAATGA+AGG - Chr8:2800948-2800967 None:intergenic 20.0%
!!! TTGATAGTTATTAAATGACA+GGG + Chr8:2803439-2803458 MsG0880042027.01.T01:intron 20.0%
!!! TTTAACTTTCAAATGCAATT+CGG - Chr8:2802324-2802343 None:intergenic 20.0%
!!! TTTGATAGTTATTAAATGAC+AGG + Chr8:2803438-2803457 MsG0880042027.01.T01:intron 20.0%
! AAAATTGATACTTGAAGAAG+GGG - Chr8:2799975-2799994 None:intergenic 25.0%
! AAACCTAACCTATCATAAAA+TGG + Chr8:2801428-2801447 MsG0880042027.01.T01:intron 25.0%
! AAATTATTCACTCATCAGAT+AGG + Chr8:2800584-2800603 MsG0880042027.01.T01:intron 25.0%
! AACCTAACCTATCATAAAAT+GGG + Chr8:2801429-2801448 MsG0880042027.01.T01:intron 25.0%
! AATTCATATAAATGCCGAAA+AGG + Chr8:2803820-2803839 MsG0880042027.01.T01:CDS 25.0%
! AATTTGAGAAAACTTATGAG+AGG + Chr8:2800955-2800974 MsG0880042027.01.T01:intron 25.0%
! ACTTAAGCTTATAGTAAAGA+TGG + Chr8:2801160-2801179 MsG0880042027.01.T01:intron 25.0%
! ATTCATATAAATGCCGAAAA+GGG + Chr8:2803821-2803840 MsG0880042027.01.T01:CDS 25.0%
! CAAAATTGATACTTGAAGAA+GGG - Chr8:2799976-2799995 None:intergenic 25.0%
! CATGTATATGTTTATGTAAG+AGG + Chr8:2800124-2800143 MsG0880042027.01.T01:intron 25.0%
! GCTTAATATATAAAGACCTT+AGG - Chr8:2801120-2801139 None:intergenic 25.0%
! GTCTTCTCTATTAAAAGAAA+GGG + Chr8:2803066-2803085 MsG0880042027.01.T01:intron 25.0%
! TAGTACCATAGATAAAATGA+CGG + Chr8:2801817-2801836 MsG0880042027.01.T01:five_prime_UTR 25.0%
! TATATGTTTATGTAAGAGGT+TGG + Chr8:2800128-2800147 MsG0880042027.01.T01:intron 25.0%
! TGTCTTCTCTATTAAAAGAA+AGG + Chr8:2803065-2803084 MsG0880042027.01.T01:intron 25.0%
!! AAACCTGTGATTCTTTTTAA+CGG + Chr8:2802251-2802270 MsG0880042027.01.T01:CDS 25.0%
!! AAAGTGTCAGAAAAAAAGAA+TGG - Chr8:2800082-2800101 None:intergenic 25.0%
!! ACATGCATTTTATCAACATT+TGG - Chr8:2803389-2803408 None:intergenic 25.0%
!! AGTTAGTTGAATTTGCATTT+TGG + Chr8:2800177-2800196 MsG0880042027.01.T01:intron 25.0%
!! ATTTTATAGTAGGGATGATA+AGG - Chr8:2802671-2802690 None:intergenic 25.0%
!! GTTAAAACACATTTTTCACT+TGG + Chr8:2800336-2800355 MsG0880042027.01.T01:intron 25.0%
!! GTTAGCTCAAATTTGTTTAA+AGG - Chr8:2800853-2800872 None:intergenic 25.0%
!! GTTTTGTCTGATACTATTTA+TGG + Chr8:2800305-2800324 MsG0880042027.01.T01:intron 25.0%
!! TAAAGATCCCATTTTATGAT+AGG - Chr8:2801439-2801458 None:intergenic 25.0%
!!! AAACTTTTTAACTTGCTAAC+TGG - Chr8:2801335-2801354 None:intergenic 25.0%
AAAAAATAACTGTCTCCGAA+TGG + Chr8:2802784-2802803 MsG0880042027.01.T01:intron 30.0%
AAAACTTCTGCTCTATATCA+AGG - Chr8:2803298-2803317 None:intergenic 30.0%
AACAAATGGAGTTGTTATGA+AGG - Chr8:2803597-2803616 None:intergenic 30.0%
AATAAGTGAAGAACAAGAAC+AGG - Chr8:2800279-2800298 None:intergenic 30.0%
AATTGAAATTGACAGCCATT+CGG - Chr8:2802802-2802821 None:intergenic 30.0%
ACGTCAATCATAGTTAGATA+GGG + Chr8:2800665-2800684 MsG0880042027.01.T01:intron 30.0%
ATACTAATCAAACAAGTGCT+TGG + Chr8:2801721-2801740 MsG0880042027.01.T01:intron 30.0%
CAAAGTTGAGCTAACATAAT+GGG + Chr8:2800734-2800753 MsG0880042027.01.T01:intron 30.0%
CAAATGCAATGTAACTACAA+TGG - Chr8:2801533-2801552 None:intergenic 30.0%
CCAAAAAAAAGAGAGATCAA+AGG - Chr8:2801581-2801600 None:intergenic 30.0%
CTATATGTATATCGGTATGT+TGG - Chr8:2801246-2801265 None:intergenic 30.0%
CTCAAATTTAAATGAAGGAC+AGG - Chr8:2800943-2800962 None:intergenic 30.0%
GATAAAGTTCAAAGTCATGA+TGG - Chr8:2801023-2801042 None:intergenic 30.0%
GCAAAATTGATACTTGAAGA+AGG - Chr8:2799977-2799996 None:intergenic 30.0%
TACGTCAATCATAGTTAGAT+AGG + Chr8:2800664-2800683 MsG0880042027.01.T01:intron 30.0%
TATTTGACAAACAAGGCTAA+TGG + Chr8:2804147-2804166 MsG0880042027.01.T01:exon 30.0%
TCAAACCGAAAAACATATCT+AGG - Chr8:2802359-2802378 None:intergenic 30.0%
TCAAAGTTGAGCTAACATAA+TGG + Chr8:2800733-2800752 MsG0880042027.01.T01:intron 30.0%
TCACTTTGCACTTATGATAA+TGG + Chr8:2802900-2802919 MsG0880042027.01.T01:intron 30.0%
TGACATTTCTGACTTAGAAT+CGG + Chr8:2803505-2803524 MsG0880042027.01.T01:CDS 30.0%
TGATATGAAAAATGAAGCAG+TGG - Chr8:2799933-2799952 None:intergenic 30.0%
TGCACATAGTATTAGTTAGA+TGG - Chr8:2802859-2802878 None:intergenic 30.0%
TGCATAAAATATGCAAAGTC+CGG - Chr8:2801623-2801642 None:intergenic 30.0%
TTAAATGCAGACTGTGATTA+AGG + Chr8:2801355-2801374 MsG0880042027.01.T01:intron 30.0%
TTTCTTATCTATGGGTTCTA+AGG + Chr8:2801405-2801424 MsG0880042027.01.T01:intron 30.0%
! ATCCCATTTTATGATAGGTT+AGG - Chr8:2801434-2801453 None:intergenic 30.0%
! CATTACTTGATAGTTTCACA+TGG + Chr8:2800622-2800641 MsG0880042027.01.T01:intron 30.0%
! CTGATCCTAGATATGTTTTT+CGG + Chr8:2802351-2802370 MsG0880042027.01.T01:CDS 30.0%
! CTTTTAAATCAGATTCTTCG+AGG - Chr8:2802079-2802098 None:intergenic 30.0%
! GAAACATGTGATAGAAGTTT+TGG + Chr8:2800802-2800821 MsG0880042027.01.T01:intron 30.0%
! TAGTTGAATTTGCATTTTGG+TGG + Chr8:2800180-2800199 MsG0880042027.01.T01:intron 30.0%
!! CTGTTATTTCACACAAACTA+AGG - Chr8:2802988-2803007 None:intergenic 30.0%
!! GGTATATTTTGTTTCATTGC+TGG + Chr8:2801742-2801761 MsG0880042027.01.T01:intron 30.0%
!! GTTGATGGTTATTTGTTGAA+GGG + Chr8:2801501-2801520 MsG0880042027.01.T01:intron 30.0%
!! TCAATTTCTAGAGTTTGTTG+TGG + Chr8:2800540-2800559 MsG0880042027.01.T01:intron 30.0%
!!! AAAGGTGAGATTTTTTCATC+TGG + Chr8:2800032-2800051 MsG0880042027.01.T01:intron 30.0%
!!! AAGGTGAGATTTTTTCATCT+GGG + Chr8:2800033-2800052 MsG0880042027.01.T01:intron 30.0%
!!! AATCGGCATTTTTAAAATGC+AGG + Chr8:2802205-2802224 MsG0880042027.01.T01:CDS 30.0%
!!! CCTTTGATCTCTCTTTTTTT+TGG + Chr8:2801578-2801597 MsG0880042027.01.T01:intron 30.0%
!!! TTGATCTCTCTTTTTTTTGG+TGG + Chr8:2801581-2801600 MsG0880042027.01.T01:intron 30.0%
AAAGAATGGAGACAGATTTG+TGG + Chr8:2799830-2799849 MsG0880042027.01.T01:five_prime_UTR 35.0%
AAATGCTAACAAGTGACCTT+AGG + Chr8:2803089-2803108 MsG0880042027.01.T01:intron 35.0%
AATGCTAACAAGTGACCTTA+GGG + Chr8:2803090-2803109 MsG0880042027.01.T01:intron 35.0%
ACAAACAAGGCTAATGGTAA+TGG + Chr8:2804153-2804172 MsG0880042027.01.T01:exon 35.0%
ACATTTCTGACTTAGAATCG+GGG + Chr8:2803507-2803526 MsG0880042027.01.T01:CDS 35.0%
AGGTGAAACAACATGAACTT+CGG - Chr8:2800923-2800942 None:intergenic 35.0%
AGTTACATTGCATTTGCAAG+AGG + Chr8:2801537-2801556 MsG0880042027.01.T01:intron 35.0%
ATTCCTTAAATCTCCACTCT+AGG + Chr8:2800493-2800512 MsG0880042027.01.T01:intron 35.0%
CAGGTCTGTCTTATATTAAC+AGG + Chr8:2801774-2801793 MsG0880042027.01.T01:intron 35.0%
CATCCGTTAAAAAGAATCAC+AGG - Chr8:2802257-2802276 None:intergenic 35.0%
CCATGTATCAAAGGATAACA+AGG + Chr8:2801479-2801498 MsG0880042027.01.T01:intron 35.0%
CTAAACTTGCAACTGAAGAT+TGG - Chr8:2802437-2802456 None:intergenic 35.0%
CTATAATCCTCATGCATGTT+TGG + Chr8:2802121-2802140 MsG0880042027.01.T01:CDS 35.0%
CTGTGTATCACGTATAACTT+CGG - Chr8:2802036-2802055 None:intergenic 35.0%
CTTCAGTTGCAAGTTTAGTA+AGG + Chr8:2802439-2802458 MsG0880042027.01.T01:CDS 35.0%
GACATTTCTGACTTAGAATC+GGG + Chr8:2803506-2803525 MsG0880042027.01.T01:CDS 35.0%
GATCAGTTGTGACAAGTATA+TGG + Chr8:2801839-2801858 MsG0880042027.01.T01:exon 35.0%
GATTCTAAGTCAGAAATGTC+AGG - Chr8:2803506-2803525 None:intergenic 35.0%
GCAAATGTGACACTCATAAT+GGG - Chr8:2802764-2802783 None:intergenic 35.0%
GCATAAAATATGCAAAGTCC+GGG - Chr8:2801622-2801641 None:intergenic 35.0%
GGAACTCTATTTGACAAACA+AGG + Chr8:2804140-2804159 MsG0880042027.01.T01:exon 35.0%
GGAATTCAACACTGCTATAA+AGG + Chr8:2800014-2800033 MsG0880042027.01.T01:five_prime_UTR 35.0%
GTACTTGAGATTGTTATGGT+TGG + Chr8:2800516-2800535 MsG0880042027.01.T01:intron 35.0%
GTGAAGATACATGATCTATC+TGG + Chr8:2803554-2803573 MsG0880042027.01.T01:CDS 35.0%
GTTGCTAGCTAACATATGAA+TGG - Chr8:2801142-2801161 None:intergenic 35.0%
TAGGTTTATCCAGTAGCAAA+TGG - Chr8:2801101-2801120 None:intergenic 35.0%
TCAAAGGATAACAAGGTTGA+TGG + Chr8:2801486-2801505 MsG0880042027.01.T01:intron 35.0%
TGAGGATTATAGAAACAACC+AGG - Chr8:2802113-2802132 None:intergenic 35.0%
TGCAAATGTGACACTCATAA+TGG - Chr8:2802765-2802784 None:intergenic 35.0%
TGTACCTCAAGCAACATATT+TGG - Chr8:2802605-2802624 None:intergenic 35.0%
TTCCTTAAATCTCCACTCTA+GGG + Chr8:2800494-2800513 MsG0880042027.01.T01:intron 35.0%
TTTGCTACTGGATAAACCTA+AGG + Chr8:2801101-2801120 MsG0880042027.01.T01:intron 35.0%
TTTGGTTGCAAATGCTTTGT+AGG - Chr8:2799795-2799814 None:intergenic 35.0%
! CACAGTTCTCATGTGTTTTT+CGG - Chr8:2803867-2803886 None:intergenic 35.0%
! CCTTGTTATCCTTTGATACA+TGG - Chr8:2801482-2801501 None:intergenic 35.0%
! CGAAAAACATATCTAGGATC+AGG - Chr8:2802353-2802372 None:intergenic 35.0%
! CTATTTTCGCAAAACTCAGA+TGG - Chr8:2801800-2801819 None:intergenic 35.0%
! CTGTGATTCTTTTTAACGGA+TGG + Chr8:2802255-2802274 MsG0880042027.01.T01:CDS 35.0%
! TAGGGTACTTGAGATTGTTA+TGG + Chr8:2800512-2800531 MsG0880042027.01.T01:intron 35.0%
! TTGCTACTCATTTCAGCTTT+TGG + Chr8:2799993-2800012 MsG0880042027.01.T01:five_prime_UTR 35.0%
! TTTCAATGTTGCTGTGCTTT+TGG - Chr8:2799813-2799832 None:intergenic 35.0%
! TTTCTTTGCAATCTGAAGCA+TGG + Chr8:2803345-2803364 MsG0880042027.01.T01:intron 35.0%
! TTTTTGTTGCAAAACCCAGA+GGG - Chr8:2802719-2802738 None:intergenic 35.0%
!! ATTCTTTTTAACGGATGGAC+AGG + Chr8:2802260-2802279 MsG0880042027.01.T01:CDS 35.0%
!! ATTGTGGAGTTGGTGTTAAA+AGG + Chr8:2802177-2802196 MsG0880042027.01.T01:CDS 35.0%
!! CTAAACTTGCTGCATGATAT+AGG + Chr8:2802636-2802655 MsG0880042027.01.T01:intron 35.0%
!! CTGATCCGTCATTTTATCTA+TGG - Chr8:2801825-2801844 None:intergenic 35.0%
!! GGTTGATGGTTATTTGTTGA+AGG + Chr8:2801500-2801519 MsG0880042027.01.T01:intron 35.0%
!! TCATTGCTGGTTTGATTAAC+AGG + Chr8:2801755-2801774 MsG0880042027.01.T01:intron 35.0%
!! TGGGATCTTTAGAACTAAGT+CGG + Chr8:2801448-2801467 MsG0880042027.01.T01:intron 35.0%
!!! ATCTCTCTTTTTTTTGGTGG+TGG + Chr8:2801584-2801603 MsG0880042027.01.T01:intron 35.0%
!!! GGCATTTTTAAAATGCAGGT+TGG + Chr8:2802209-2802228 MsG0880042027.01.T01:CDS 35.0%
!!! TAGAAGTTTTGGACGAAAAG+AGG + Chr8:2800813-2800832 MsG0880042027.01.T01:intron 35.0%
!!! TTTTTTGTTGCAAAACCCAG+AGG - Chr8:2802720-2802739 None:intergenic 35.0%
AACAGATGTGACACTCACAA+TGG + Chr8:2803003-2803022 MsG0880042027.01.T01:intron 40.0%
ACAGATGTGACACTCACAAT+GGG + Chr8:2803004-2803023 MsG0880042027.01.T01:intron 40.0%
ACATATTTGGACCAAGGACA+TGG - Chr8:2802592-2802611 None:intergenic 40.0%
ACTCCATTTGTTCCATCTTC+AGG + Chr8:2803605-2803624 MsG0880042027.01.T01:CDS 40.0%
ACTGGAATTGAACTGAACAC+TGG + Chr8:2801912-2801931 MsG0880042027.01.T01:CDS 40.0%
AGGAACAGGAACAATCATAC+AGG - Chr8:2800253-2800272 None:intergenic 40.0%
ATGACAAAACCTCCAACAAC+CGG - Chr8:2803950-2803969 None:intergenic 40.0%
CAACCTGAAGATGGAACAAA+TGG - Chr8:2803611-2803630 None:intergenic 40.0%
CAAGCAACATATTTGGACCA+AGG - Chr8:2802598-2802617 None:intergenic 40.0%
CATATAAATGCCGAAAAGGG+TGG + Chr8:2803824-2803843 MsG0880042027.01.T01:CDS 40.0%
CATTAGAGATTACTCCCTCT+GGG + Chr8:2802702-2802721 MsG0880042027.01.T01:intron 40.0%
CCATGTGACAAAGAGATCAA+AGG - Chr8:2801683-2801702 None:intergenic 40.0%
CCTTTGATCTCTTTGTCACA+TGG + Chr8:2801680-2801699 MsG0880042027.01.T01:intron 40.0%
CGAAAAACACATGAGAACTG+TGG + Chr8:2803865-2803884 MsG0880042027.01.T01:CDS 40.0%
GAACTGAACACTGGAAAATC+TGG + Chr8:2801921-2801940 MsG0880042027.01.T01:CDS 40.0%
GCACAGCAACATTGAAAGAA+TGG + Chr8:2799816-2799835 MsG0880042027.01.T01:five_prime_UTR 40.0%
GCCTATCGACAACCTAATAA+AGG - Chr8:2801874-2801893 None:intergenic 40.0%
GGATTGTCACCATGTATCAA+AGG + Chr8:2801470-2801489 MsG0880042027.01.T01:intron 40.0%
GGTGTTAAAAGGCAGCAAAT+CGG + Chr8:2802188-2802207 MsG0880042027.01.T01:CDS 40.0%
GTTGCAAGTTTAGTAAGGAC+AGG + Chr8:2802444-2802463 MsG0880042027.01.T01:CDS 40.0%
GTTTCTTAACTAGTGCCCTA+AGG - Chr8:2803108-2803127 None:intergenic 40.0%
TACCCTAGAGTGGAGATTTA+AGG - Chr8:2800499-2800518 None:intergenic 40.0%
TATGCTAACAAGTGCCCTTA+GGG - Chr8:2803247-2803266 None:intergenic 40.0%
TCAGAAGTTTCTCAACTGCT+TGG + Chr8:2800408-2800427 MsG0880042027.01.T01:intron 40.0%
TCCCTTCTTCCCTGAAAATA+CGG - Chr8:2802153-2802172 None:intergenic 40.0%
TGAAGAACAAGAACAGGAAC+AGG - Chr8:2800273-2800292 None:intergenic 40.0%
TTATGCTAACAAGTGCCCTT+AGG - Chr8:2803248-2803267 None:intergenic 40.0%
! GCCTTTATTAGGTTGTCGAT+AGG + Chr8:2801870-2801889 MsG0880042027.01.T01:CDS 40.0%
! TGGTCCAAATATGTTGCTTG+AGG + Chr8:2802598-2802617 MsG0880042027.01.T01:intron 40.0%
! TTTAACGGATGGACAGGTAT+TGG + Chr8:2802266-2802285 MsG0880042027.01.T01:CDS 40.0%
!! AGGTATTGGCAAGAACAAAC+AGG + Chr8:2802280-2802299 MsG0880042027.01.T01:CDS 40.0%
!! GAGTCTTTTCCATTTGCTAC+TGG + Chr8:2801089-2801108 MsG0880042027.01.T01:intron 40.0%
!! GGGATCTTTAGAACTAAGTC+GGG + Chr8:2801449-2801468 MsG0880042027.01.T01:intron 40.0%
!! TCCATCTTCAGGTTGTGATT+GGG + Chr8:2803616-2803635 MsG0880042027.01.T01:CDS 40.0%
!! TGGGAGTTGACTTTGTCTTT+TGG + Chr8:2800753-2800772 MsG0880042027.01.T01:intron 40.0%
!! TTAAAAGCGTTGTTAGCTCC+TGG + Chr8:2802092-2802111 MsG0880042027.01.T01:CDS 40.0%
!! TTCCATCTTCAGGTTGTGAT+TGG + Chr8:2803615-2803634 MsG0880042027.01.T01:CDS 40.0%
!!! AAGTTTTGGACGAAAAGAGG+AGG + Chr8:2800816-2800835 MsG0880042027.01.T01:intron 40.0%
!!! AGTTTTGGACGAAAAGAGGA+GGG + Chr8:2800817-2800836 MsG0880042027.01.T01:intron 40.0%
AAACAGGAGAACGGAAAACC+AGG + Chr8:2802296-2802315 MsG0880042027.01.T01:CDS 45.0%
AACCAAACACTCCATGTCCT+TGG + Chr8:2802578-2802597 MsG0880042027.01.T01:intron 45.0%
AACTTCGGCAGAGGTTATCA+AGG - Chr8:2802021-2802040 None:intergenic 45.0%
AAGGGATCTCATTGTGGAGT+TGG + Chr8:2802167-2802186 MsG0880042027.01.T01:CDS 45.0%
ACAACATGAACTTCGGAGTG+AGG - Chr8:2800916-2800935 None:intergenic 45.0%
ACAAGAACAGGAACAGGAAC+AGG - Chr8:2800267-2800286 None:intergenic 45.0%
ACCCAATCACAACCTGAAGA+TGG - Chr8:2803620-2803639 None:intergenic 45.0%
ACCCTCTTCTGATCTTCCTT+CGG - Chr8:2804117-2804136 None:intergenic 45.0%
ACTTCGGCAGAGGTTATCAA+GGG - Chr8:2802020-2802039 None:intergenic 45.0%
AGATCACGAGGACAAGAAGA+AGG - Chr8:2799886-2799905 None:intergenic 45.0%
AGCTGTAGAGTTCAAGGTGA+AGG + Chr8:2803971-2803990 MsG0880042027.01.T01:CDS 45.0%
AGTTCAAAGTCATGATGGCC+TGG - Chr8:2801018-2801037 None:intergenic 45.0%
ATACCTAGTCCCCAAAGTAG+CGG + Chr8:2803905-2803924 MsG0880042027.01.T01:CDS 45.0%
ATCACGTATAACTTCGGCAG+AGG - Chr8:2802030-2802049 None:intergenic 45.0%
ATCCTTAACTAGTGCCCCTA+AGG + Chr8:2803229-2803248 MsG0880042027.01.T01:intron 45.0%
ATGCTAACAAGTGCCCTTAG+GGG - Chr8:2803246-2803265 None:intergenic 45.0%
ATGTGACACTCACAATGGGA+CGG + Chr8:2803008-2803027 MsG0880042027.01.T01:intron 45.0%
CAATCTCAAGTACCCTAGAG+TGG - Chr8:2800509-2800528 None:intergenic 45.0%
CATGAGAACTGTGGCTTCTA+CGG + Chr8:2803874-2803893 MsG0880042027.01.T01:CDS 45.0%
CGACAACCTAATAAAGGCCT+GGG - Chr8:2801868-2801887 None:intergenic 45.0%
CTAGACATGTATCGCAACCT+TGG + Chr8:2800989-2801008 MsG0880042027.01.T01:intron 45.0%
CTTCGGAGTGAGGCAAAATT+TGG - Chr8:2800906-2800925 None:intergenic 45.0%
CTTCTGATCTTCCTTCGGAA+AGG - Chr8:2804112-2804131 None:intergenic 45.0%
GAACAATCAACCAAGCTCCT+GGG - Chr8:2803655-2803674 None:intergenic 45.0%
GACAACCTAATAAAGGCCTG+GGG - Chr8:2801867-2801886 None:intergenic 45.0%
GCATTAGAGATTACTCCCTC+TGG + Chr8:2802701-2802720 MsG0880042027.01.T01:intron 45.0%
GGAAGATCAGAAGAGGGTTT+CGG + Chr8:2804119-2804138 MsG0880042027.01.T01:CDS 45.0%
GGCAAGAACAAACAGGAGAA+CGG + Chr8:2802287-2802306 MsG0880042027.01.T01:CDS 45.0%
GTCATGAGCTGTAGAGTTCA+AGG + Chr8:2803965-2803984 MsG0880042027.01.T01:CDS 45.0%
GTTTGTGAGATACGACTTCG+AGG + Chr8:2801969-2801988 MsG0880042027.01.T01:CDS 45.0%
TCCGAAGGAAGATCAGAAGA+GGG + Chr8:2804113-2804132 MsG0880042027.01.T01:CDS 45.0%
TCCTTAACTAGTGCCCCTAA+GGG + Chr8:2803230-2803249 MsG0880042027.01.T01:intron 45.0%
TCGACAACCTAATAAAGGCC+TGG - Chr8:2801869-2801888 None:intergenic 45.0%
TCTCAACTGCTTGGACTTTG+TGG + Chr8:2800417-2800436 MsG0880042027.01.T01:intron 45.0%
TGACAAGTATATGGATCCCC+AGG + Chr8:2801848-2801867 MsG0880042027.01.T01:exon 45.0%
TTCAAATGCAATTCGGCACC+TGG - Chr8:2802317-2802336 None:intergenic 45.0%
TTCCGAAGGAAGATCAGAAG+AGG + Chr8:2804112-2804131 MsG0880042027.01.T01:CDS 45.0%
TTTCTGACTTAGAATCGGGG+AGG + Chr8:2803510-2803529 MsG0880042027.01.T01:CDS 45.0%
! ACCAAAGTCTCCGCTACTTT+GGG - Chr8:2803918-2803937 None:intergenic 45.0%
! CTACTTTGGGGACTAGGTAT+TGG - Chr8:2803905-2803924 None:intergenic 45.0%
! GAAAAACTCGCCACCCTTTT+CGG - Chr8:2803837-2803856 None:intergenic 45.0%
! GGGACTGATGATGTTTGAAC+AGG - Chr8:2801999-2802018 None:intergenic 45.0%
! TCTCTGGGTTTGAGAAGTAC+TGG + Chr8:2801894-2801913 MsG0880042027.01.T01:CDS 45.0%
! TGAGCATAGCTCAGTTGGTA+TGG - Chr8:2801650-2801669 None:intergenic 45.0%
! TGGAGATCGCCGTATTTTCA+GGG + Chr8:2802141-2802160 MsG0880042027.01.T01:CDS 45.0%
! TTGACTCGTTGAGCACATAC+TGG + Chr8:2803471-2803490 MsG0880042027.01.T01:CDS 45.0%
! TTGGAGATCGCCGTATTTTC+AGG + Chr8:2802140-2802159 MsG0880042027.01.T01:CDS 45.0%
!! GCCGTATTTTCAGGGAAGAA+GGG + Chr8:2802149-2802168 MsG0880042027.01.T01:CDS 45.0%
AATCAACCAAGCTCCTGGGT+TGG - Chr8:2803651-2803670 None:intergenic 50.0%
AGCTGTTGACCTCAGCATTG+AGG + Chr8:2804078-2804097 MsG0880042027.01.T01:CDS 50.0%
AGGTTGTCGATAGGCTCTCT+GGG + Chr8:2801879-2801898 MsG0880042027.01.T01:CDS 50.0%
ATTGTTCGTCCCGATGTGGT+TGG + Chr8:2803668-2803687 MsG0880042027.01.T01:CDS 50.0%
CAAAGTCCGGGTTCAAACCA+GGG - Chr8:2801610-2801629 None:intergenic 50.0%
CACCAAAGTCTCCGCTACTT+TGG - Chr8:2803919-2803938 None:intergenic 50.0%
CATGCTTCAAGCTTTCCCCA+CGG - Chr8:2803713-2803732 None:intergenic 50.0%
CCTTGCAGCAGAACTATCTG+AGG - Chr8:2802401-2802420 None:intergenic 50.0%
CGAACAATCAACCAAGCTCC+TGG - Chr8:2803656-2803675 None:intergenic 50.0%
CGCAATGCCAGCTGTACTAA+TGG - Chr8:2804010-2804029 None:intergenic 50.0%
CTCGGATCTACCAACCACAT+CGG - Chr8:2803681-2803700 None:intergenic 50.0%
CTCGTTGAGCACATACTGGT+CGG + Chr8:2803475-2803494 MsG0880042027.01.T01:CDS 50.0%
CTTCGGCAGAGGTTATCAAG+GGG - Chr8:2802019-2802038 None:intergenic 50.0%
GAGAGAGAGAAAAGGGTGGA+AGG + Chr8:2803532-2803551 MsG0880042027.01.T01:CDS 50.0%
GCGATCTCCAAACATGCATG+AGG - Chr8:2802131-2802150 None:intergenic 50.0%
GGGAAGAAGGGATCTCATTG+TGG + Chr8:2802161-2802180 MsG0880042027.01.T01:CDS 50.0%
GTTCAAGGTGAAGGAAAGCG+TGG + Chr8:2803980-2803999 MsG0880042027.01.T01:CDS 50.0%
GTTGATTGTTCGTCCCGATG+TGG + Chr8:2803664-2803683 MsG0880042027.01.T01:CDS 50.0%
GTTTCCCTTCACCCCATTCA+GGG - Chr8:2802235-2802254 None:intergenic 50.0%
TAGGTTGTCGATAGGCTCTC+TGG + Chr8:2801878-2801897 MsG0880042027.01.T01:CDS 50.0%
TCGGATCTACCAACCACATC+GGG - Chr8:2803680-2803699 None:intergenic 50.0%
TCGTTGAGCACATACTGGTC+GGG + Chr8:2803476-2803495 MsG0880042027.01.T01:CDS 50.0%
TGCCATCTTCATGGCACTTG+CGG + Chr8:2804054-2804073 MsG0880042027.01.T01:CDS 50.0%
TGGATCCCCAGGCCTTTATT+AGG + Chr8:2801859-2801878 MsG0880042027.01.T01:CDS 50.0%
TGGCAAGCCATTAGTACAGC+TGG + Chr8:2804000-2804019 MsG0880042027.01.T01:CDS 50.0%
! AAATGCAGGTTGGCCCTGAA+TGG + Chr8:2802219-2802238 MsG0880042027.01.T01:CDS 50.0%
! AATGCAGGTTGGCCCTGAAT+GGG + Chr8:2802220-2802239 MsG0880042027.01.T01:CDS 50.0%
! AGACTTTGGTGCACTGAGTC+CGG + Chr8:2803928-2803947 MsG0880042027.01.T01:CDS 50.0%
! CCAAAGTCTCCGCTACTTTG+GGG - Chr8:2803917-2803936 None:intergenic 50.0%
! CCTCAGATAGTTCTGCTGCA+AGG + Chr8:2802398-2802417 MsG0880042027.01.T01:CDS 50.0%
! GACCAAGGACATGGAGTGTT+TGG - Chr8:2802583-2802602 None:intergenic 50.0%
!! CGCCGTATTTTCAGGGAAGA+AGG + Chr8:2802148-2802167 MsG0880042027.01.T01:CDS 50.0%
!!! CTTTTTTTTGGTGGTGGCCC+TGG + Chr8:2801590-2801609 MsG0880042027.01.T01:intron 50.0%
AGGCATGCAAGCCTTTCCGA+AGG + Chr8:2804098-2804117 MsG0880042027.01.T01:CDS 55.0%
CAAGATCCAACCCAGGAGCT+TGG + Chr8:2803642-2803661 MsG0880042027.01.T01:CDS 55.0%
CCAACTGAGCTATGCTCACG+AGG + Chr8:2801652-2801671 MsG0880042027.01.T01:intron 55.0%
CCTCGTGAGCATAGCTCAGT+TGG - Chr8:2801655-2801674 None:intergenic 55.0%
CGGGGAGGAGAGAGAGAAAA+GGG + Chr8:2803525-2803544 MsG0880042027.01.T01:CDS 55.0%
CGTGGGGAAAGCTTGAAGCA+TGG + Chr8:2803711-2803730 MsG0880042027.01.T01:CDS 55.0%
GACACTCACAATGGGACGGA+GGG + Chr8:2803012-2803031 MsG0880042027.01.T01:intron 55.0%
GCAAAGTCCGGGTTCAAACC+AGG - Chr8:2801611-2801630 None:intergenic 55.0%
GCTTGCATGCCTCAATGCTG+AGG - Chr8:2804090-2804109 None:intergenic 55.0%
GGAGGAGAGAGAGAAAAGGG+TGG + Chr8:2803528-2803547 MsG0880042027.01.T01:CDS 55.0%
GGAGGATGCTGCCATCTTCA+TGG + Chr8:2804045-2804064 MsG0880042027.01.T01:CDS 55.0%
GGTTTCCCTTCACCCCATTC+AGG - Chr8:2802236-2802255 None:intergenic 55.0%
TCGGGGAGGAGAGAGAGAAA+AGG + Chr8:2803524-2803543 MsG0880042027.01.T01:CDS 55.0%
TGACACTCACAATGGGACGG+AGG + Chr8:2803011-2803030 MsG0880042027.01.T01:intron 55.0%
TGCCGCAAGTGCCATGAAGA+TGG - Chr8:2804059-2804078 None:intergenic 55.0%
TGGGTTGCAAGATCCAACCC+AGG + Chr8:2803635-2803654 MsG0880042027.01.T01:CDS 55.0%
TTGGCCCTGAATGGGGTGAA+GGG + Chr8:2802228-2802247 MsG0880042027.01.T01:CDS 55.0%
! ATGCAGGTTGGCCCTGAATG+GGG + Chr8:2802221-2802240 MsG0880042027.01.T01:CDS 55.0%
! CCCCAAAGTAGCGGAGACTT+TGG + Chr8:2803914-2803933 MsG0880042027.01.T01:CDS 55.0%
! CTGAGAGTGCACAGATCACG+AGG - Chr8:2799898-2799917 None:intergenic 55.0%
! TCTCCGCTACTTTGGGGACT+AGG - Chr8:2803911-2803930 None:intergenic 55.0%
!! GCCCTTAGGGGCACTAGTTA+AGG - Chr8:2803234-2803253 None:intergenic 55.0%
!! TGGTTGGTAGATCCGAGAGC+TGG + Chr8:2803684-2803703 MsG0880042027.01.T01:CDS 55.0%
ATTGCGACACGTGACGTGCG+TGG + Chr8:2804024-2804043 MsG0880042027.01.T01:CDS 60.0%
GCACTGAGTCCGGTTGTTGG+AGG + Chr8:2803938-2803957 MsG0880042027.01.T01:CDS 60.0%
GGTGCACTGAGTCCGGTTGT+TGG + Chr8:2803935-2803954 MsG0880042027.01.T01:CDS 60.0%
GTATCGCAACCTTGGCGACC+AGG + Chr8:2800997-2801016 MsG0880042027.01.T01:intron 60.0%
GTTGGCCCTGAATGGGGTGA+AGG + Chr8:2802227-2802246 MsG0880042027.01.T01:CDS 60.0%
TCATGATGGCCTGGTCGCCA+AGG - Chr8:2801009-2801028 None:intergenic 60.0%
! TGGTGGCCCTGGTTTGAACC+CGG + Chr8:2801601-2801620 MsG0880042027.01.T01:intron 60.0%
ATCCGAGAGCTGGCAGCCGT+GGG + Chr8:2803694-2803713 MsG0880042027.01.T01:CDS 65.0%
CTTGAAGCATGGCGCGAGCG+TGG + Chr8:2803722-2803741 MsG0880042027.01.T01:CDS 65.0%
GATCCGAGAGCTGGCAGCCG+TGG + Chr8:2803693-2803712 MsG0880042027.01.T01:CDS 70.0%
GCGACACGTGACGTGCGTGG+AGG + Chr8:2804027-2804046 MsG0880042027.01.T01:CDS 70.0%
TCCCCACGGCTGCCAGCTCT+CGG - Chr8:2803699-2803718 None:intergenic 70.0%
TCCGAGAGCTGGCAGCCGTG+GGG + Chr8:2803695-2803714 MsG0880042027.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2799790 2804364 2799790 ID=MsG0880042027.01;Name=MsG0880042027.01
Chr8 mRNA 2799790 2804364 2799790 ID=MsG0880042027.01.T01;Parent=MsG0880042027.01;Name=MsG0880042027.01.T01;_AED=0.32;_eAED=0.32;_QI=308|1|1|1|0.5|0.33|3|211|433
Chr8 exon 2799790 2800035 2799790 ID=MsG0880042027.01.T01:exon:1926;Parent=MsG0880042027.01.T01
Chr8 exon 2801796 2802465 2801796 ID=MsG0880042027.01.T01:exon:1927;Parent=MsG0880042027.01.T01
Chr8 exon 2803460 2804364 2803460 ID=MsG0880042027.01.T01:exon:1928;Parent=MsG0880042027.01.T01
Chr8 five_prime_UTR 2799790 2800035 2799790 ID=MsG0880042027.01.T01:five_prime_utr;Parent=MsG0880042027.01.T01
Chr8 five_prime_UTR 2801796 2801857 2801796 ID=MsG0880042027.01.T01:five_prime_utr;Parent=MsG0880042027.01.T01
Chr8 CDS 2801858 2802465 2801858 ID=MsG0880042027.01.T01:cds;Parent=MsG0880042027.01.T01
Chr8 CDS 2803460 2804153 2803460 ID=MsG0880042027.01.T01:cds;Parent=MsG0880042027.01.T01
Chr8 three_prime_UTR 2804154 2804364 2804154 ID=MsG0880042027.01.T01:three_prime_utr;Parent=MsG0880042027.01.T01
Gene Sequence

>MsG0880042027.01.T01

ATGGATCCCCAGGCCTTTATTAGGTTGTCGATAGGCTCTCTGGGTTTGAGAAGTACTGGAATTGAACTGAACACTGGAAAATCTGGAATTCAAAGACTTTCTTCAACTTATGTTTGTGAGATACGACTTCGAGGTTTTCCTGTTCAAACATCATCAGTCCCCTTGATAACCTCTGCCGAAGTTATACGTGATACACAGAACATTGCTTCAAGCTTTTACCTCGAAGAATCTGATTTAAAAGCGTTGTTAGCTCCTGGTTGTTTCTATAATCCTCATGCATGTTTGGAGATCGCCGTATTTTCAGGGAAGAAGGGATCTCATTGTGGAGTTGGTGTTAAAAGGCAGCAAATCGGCATTTTTAAAATGCAGGTTGGCCCTGAATGGGGTGAAGGGAAACCTGTGATTCTTTTTAACGGATGGACAGGTATTGGCAAGAACAAACAGGAGAACGGAAAACCAGGTGCCGAATTGCATTTGAAAGTTAAACTAGATCCTGATCCTAGATATGTTTTTCGGTTTGAAGATATAACAACATTGAGTCCTCAGATAGTTCTGCTGCAAGGATCAATCAAGCAGCCAATCTTCAGTTGCAAGTTTAGTAAGGACAGGGTTTCTCAGATTGACTCGTTGAGCACATACTGGTCGGGTTCTCCTGACATTTCTGACTTAGAATCGGGGAGGAGAGAGAGAAAAGGGTGGAAGGTGAAGATACATGATCTATCTGGTTCAGCTGTAGCTGCAGCCTTCATAACAACTCCATTTGTTCCATCTTCAGGTTGTGATTGGGTTGCAAGATCCAACCCAGGAGCTTGGTTGATTGTTCGTCCCGATGTGGTTGGTAGATCCGAGAGCTGGCAGCCGTGGGGAAAGCTTGAAGCATGGCGCGAGCGTGGCATTAAAGACTCTATATGTTGCAAATTCCATCTTCTATCCGAACCTCAAGATGGAGGCAATCTTCTTATGTCTGAAATTCATATAAATGCCGAAAAGGGTGGCGAGTTTTTCATTGATACCGAAAAACACATGAGAACTGTGGCTTCTACGGCAAGTCCAATACCTAGTCCCCAAAGTAGCGGAGACTTTGGTGCACTGAGTCCGGTTGTTGGAGGTTTTGTCATGAGCTGTAGAGTTCAAGGTGAAGGAAAGCGTGGCAAGCCATTAGTACAGCTGGCATTGCGACACGTGACGTGCGTGGAGGATGCTGCCATCTTCATGGCACTTGCGGCAGCTGTTGACCTCAGCATTGAGGCATGCAAGCCTTTCCGAAGGAAGATCAGAAGAGGGTTTCGGAACTCTATTTGA
Protein sequence

>MsG0880042027.01.T01

MDPQAFIRLSIGSLGLRSTGIELNTGKSGIQRLSSTYVCEIRLRGFPVQTSSVPLITSAEVIRDTQNIASSFYLEESDLKALLAPGCFYNPHACLEIAVFSGKKGSHCGVGVKRQQIGIFKMQVGPEWGEGKPVILFNGWTGIGKNKQENGKPGAELHLKVKLDPDPRYVFRFEDITTLSPQIVLLQGSIKQPIFSCKFSKDRVSQIDSLSTYWSGSPDISDLESGRRERKGWKVKIHDLSGSAVAAAFITTPFVPSSGCDWVARSNPGAWLIVRPDVVGRSESWQPWGKLEAWRERGIKDSICCKFHLLSEPQDGGNLLMSEIHINAEKGGEFFIDTEKHMRTVASTASPIPSPQSSGDFGALSPVVGGFVMSCRVQGEGKRGKPLVQLALRHVTCVEDAAIFMALAAAVDLSIEACKPFRRKIRRGFRNSI*