AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024277.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024277.01.T01 MTR_5g008040 97.574 371 9 0 1 371 1 371 0.0 758
MsG0580024277.01.T01 MTR_5g006800 82.609 368 64 0 3 370 1 368 0.0 648
MsG0580024277.01.T01 MTR_5g006780 81.351 370 67 1 3 370 1 370 0.0 634
MsG0580024277.01.T01 MTR_5g006750 77.027 370 83 1 3 370 1 370 0.0 613
MsG0580024277.01.T01 MTR_5g006740 78.297 364 79 0 7 370 1 364 0.0 607
MsG0580024277.01.T01 MTR_5g006670 78.297 364 73 1 7 370 1 358 0.0 603
MsG0580024277.01.T01 MTR_5g006710 77.446 368 77 1 3 370 1 362 0.0 603
MsG0580024277.01.T01 MTR_5g006740 75.275 364 73 2 7 370 1 347 0.0 571
MsG0580024277.01.T01 MTR_5g006720 70.968 372 70 2 10 370 7 351 0.0 531
MsG0580024277.01.T01 MTR_3g115600 66.852 359 115 1 12 370 8 362 0.0 520
MsG0580024277.01.T01 MTR_4g125470 54.054 370 157 4 14 370 19 388 8.78e-139 401
MsG0580024277.01.T01 MTR_5g006730 72.414 116 32 0 3 118 1 116 1.27e-56 181
MsG0580024277.01.T01 MTR_3g096570 74.324 74 16 1 177 250 8 78 1.81e-30 117
MsG0580024277.01.T01 MTR_3g096562 61.290 93 33 1 158 250 153 242 7.70e-30 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024277.01.T01 AT1G76690 73.514 370 98 0 1 370 1 370 0.0 589
MsG0580024277.01.T01 AT1G76680 73.259 359 96 0 12 370 10 368 0.0 567
MsG0580024277.01.T01 AT1G76680 68.490 384 96 1 12 370 10 393 0.0 554
MsG0580024277.01.T01 AT1G09400 67.879 330 100 1 20 349 1 324 9.51e-177 494
MsG0580024277.01.T01 AT1G09400 69.630 270 76 1 80 349 2 265 7.63e-146 414
MsG0580024277.01.T01 AT1G17990 70.498 261 72 2 8 268 3 258 1.02e-136 390
MsG0580024277.01.T01 AT1G18020 70.498 261 72 2 8 268 3 258 1.02e-136 390
MsG0580024277.01.T01 AT2G06050 50.794 378 161 5 14 370 12 385 2.07e-134 389
MsG0580024277.01.T01 AT2G06050 50.794 378 161 5 14 370 12 385 2.07e-134 389
MsG0580024277.01.T01 AT2G06050 50.794 378 161 5 14 370 12 385 2.07e-134 389
MsG0580024277.01.T01 AT1G17990 67.816 261 71 3 8 268 3 250 2.49e-128 369

Find 96 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATATTGTATTTATTT+AGG 0.097654 5:+2852909 None:intergenic
AAGAATATTGTATTTATTTA+GGG 0.238682 5:+2852910 None:intergenic
ACAAAAGAATATACCTTCTT+TGG 0.264174 5:+2854749 None:intergenic
TTATCGCCTTTCGCAGAATA+TGG 0.269710 5:-2852983 MsG0580024277.01.T01:CDS
TATACAGACTACCCATTTCT+TGG 0.283332 5:-2852605 MsG0580024277.01.T01:CDS
GCGAATCTCTTTGGCAAATC+TGG 0.289004 5:+2852692 None:intergenic
TGAAGAATTGGGGCTTTATA+TGG 0.290560 5:-2852939 MsG0580024277.01.T01:CDS
AGGACAGATCTTGTTGCTTA+TGG 0.306262 5:-2852734 MsG0580024277.01.T01:CDS
GGCATGAACAGCATCTATAA+TGG 0.307487 5:+2854770 None:intergenic
GAGAGTAATACAAAGTAGTA+TGG 0.315383 5:+2857396 None:intergenic
CTCCAAATGCCTGGTGTGTT+TGG 0.320356 5:+2854819 None:intergenic
GACTCCAATCCTGAAGAATT+GGG 0.339508 5:-2852950 MsG0580024277.01.T01:CDS
TCGATGCCATAGTTGAAAAT+AGG 0.349377 5:-2852754 MsG0580024277.01.T01:CDS
TACACATCTGATCCTGTTCA+TGG 0.350651 5:-2852629 MsG0580024277.01.T01:CDS
AGACTCCAATCCTGAAGAAT+TGG 0.353413 5:-2852951 MsG0580024277.01.T01:CDS
ACTATAGTTTAACCAAGAAA+TGG 0.355225 5:+2852593 None:intergenic
GGTGGAAGGGCTTCTAATTC+AGG 0.355726 5:-2854714 MsG0580024277.01.T01:intron
CTCCTCTCAACAAGTATAAC+CGG 0.365420 5:-2852661 MsG0580024277.01.T01:CDS
ATGCCATTGCTTCGAGTTTG+TGG 0.368988 5:+2853420 None:intergenic
CTTTCATAAACTGCTCAATC+AGG 0.376352 5:+2853125 None:intergenic
GCATGAACAGCATCTATAAT+GGG 0.379316 5:+2854771 None:intergenic
GCATCGAGCGCGAATCTCTT+TGG 0.386673 5:+2852683 None:intergenic
TTTGATGGAGTTGAGATTCA+TGG 0.388604 5:-2853160 MsG0580024277.01.T01:CDS
ATCCAAACACACCAGGCATT+TGG 0.397429 5:-2854821 MsG0580024277.01.T01:CDS
GAGATTGGTGCCTGCCCATT+TGG 0.400148 5:+2853465 None:intergenic
CCATTGAAGGCCTTTCTCAT+TGG 0.402287 5:+2852818 None:intergenic
AAACCGTTGTCGATTCGCTT+TGG 0.409098 5:-2853059 MsG0580024277.01.T01:CDS
ATATAAAGCCCCAATTCTTC+AGG 0.429449 5:+2852941 None:intergenic
AATCAACCAACAAATGGAAA+TGG 0.436673 5:-2857643 None:intergenic
GTCAGATTTGGCATGGTGGA+AGG 0.438961 5:-2854728 MsG0580024277.01.T01:CDS
TTGATGGAGTTGAGATTCAT+GGG 0.440869 5:-2853159 MsG0580024277.01.T01:CDS
TGAACAGGTTATCAACCAAA+TGG 0.454311 5:-2853480 MsG0580024277.01.T01:intron
TTCCACCGTATTTATCAGTT+CGG 0.457487 5:+2853089 None:intergenic
GGAAATGGCTGGTGCATTAA+CGG 0.458205 5:-2857628 MsG0580024277.01.T01:CDS
GAGGAATTTCATAGGTCCTT+AGG 0.460370 5:+2853367 None:intergenic
AAGCCCCAATTCTTCAGGAT+TGG 0.460435 5:+2852946 None:intergenic
TAAGGAGTGAGAAGAGGAAT+GGG 0.466735 5:+2857600 None:intergenic
GACAATCTGAGGAATTTCAT+AGG 0.470443 5:+2853359 None:intergenic
AACTATAAAAGTGCCATTGA+AGG 0.470936 5:+2852805 None:intergenic
AGAGTAATACAAAGTAGTAT+GGG 0.477134 5:+2857397 None:intergenic
GTAAGGAGTGAGAAGAGGAA+TGG 0.477825 5:+2857599 None:intergenic
TCATAGGTCCTTAGGCGCCT+TGG 0.480630 5:+2853375 None:intergenic
TAGTCTGTATAACCATGAAC+AGG 0.490112 5:+2852617 None:intergenic
TACAAAGTAGTATGGGGTTG+AGG 0.493113 5:+2857404 None:intergenic
TCTTCTCACTCCTTACAAGA+TGG 0.497609 5:-2857592 MsG0580024277.01.T01:CDS
AGTTGAATGTCTTCACAGCT+TGG 0.498662 5:-2852843 MsG0580024277.01.T01:CDS
CTATAGTTTAACCAAGAAAT+GGG 0.499286 5:+2852594 None:intergenic
CAGCTTGGTGCCAATGAGAA+AGG 0.501105 5:-2852828 MsG0580024277.01.T01:CDS
CCAATGAGAAAGGCCTTCAA+TGG 0.504166 5:-2852818 MsG0580024277.01.T01:CDS
TCAGATTTGGCATGGTGGAA+GGG 0.507126 5:-2854727 MsG0580024277.01.T01:CDS
GAAAAGATCAAGTTGAAACT+TGG 0.507676 5:-2854797 MsG0580024277.01.T01:CDS
TAGGTCCTTAGGCGCCTTGG+TGG 0.512296 5:+2853378 None:intergenic
GCAAGGAATGCTATAGCAGC+TGG 0.514833 5:-2853318 MsG0580024277.01.T01:intron
CTTCTCATAGCTGAATCTAC+TGG 0.515752 5:-2857353 MsG0580024277.01.T01:CDS
GGTGTCTCTGAAACCTCTCT+AGG 0.524407 5:-2857332 MsG0580024277.01.T01:CDS
CTACTTTGTATTACTCTCAA+AGG 0.525931 5:-2857391 MsG0580024277.01.T01:CDS
TCACACCACCAAGGCGCCTA+AGG 0.531884 5:-2853383 MsG0580024277.01.T01:CDS
GACTTGTTAGTAGAAGAGAT+TGG 0.541311 5:+2853450 None:intergenic
GAAGCCGTTGTGAATGAGAT+AGG 0.542870 5:-2853028 MsG0580024277.01.T01:CDS
GATGCTGTTCATGCCAAAGA+AGG 0.542914 5:-2854762 MsG0580024277.01.T01:CDS
GGAGGCTATTCGCGACAAGA+TGG 0.544028 5:-2852779 MsG0580024277.01.T01:CDS
GAACAGGTTATCAACCAAAT+GGG 0.545439 5:-2853479 MsG0580024277.01.T01:intron
CTGAAGTCATTGACAATCTG+AGG 0.547111 5:+2853348 None:intergenic
ATCTTGTCGCGAATAGCCTC+CGG 0.553417 5:+2852781 None:intergenic
CTTCTCACTCCTTACAAGAT+GGG 0.554172 5:-2857591 MsG0580024277.01.T01:CDS
GTTGAGATTCATGGGGCTCA+CGG 0.554844 5:-2853151 MsG0580024277.01.T01:CDS
AACCAACAAATGGAAATGGC+TGG 0.557584 5:-2857639 None:intergenic
TAGAATCTCTGTCTAGTCAA+TGG 0.558746 5:+2857437 None:intergenic
GAGATAGGTGCAGAAAGAGT+TGG 0.559213 5:-2853013 MsG0580024277.01.T01:CDS
GAGGCTATTCGCGACAAGAT+GGG 0.560123 5:-2852778 MsG0580024277.01.T01:CDS
TACTCTCAAAGGACTTCTCA+AGG 0.570486 5:-2857380 MsG0580024277.01.T01:CDS
AATGACCGAACTGATAAATA+CGG 0.575287 5:-2853094 MsG0580024277.01.T01:CDS
AGGTTATCAACCAAATGGGC+AGG 0.575640 5:-2853475 MsG0580024277.01.T01:CDS
CAATATTCTTTACTGCCACA+TGG 0.580930 5:-2852897 MsG0580024277.01.T01:CDS
CAGATGTGTAGAACGTCTCC+CGG 0.586149 5:+2852642 None:intergenic
TCCCGGTTATACTTGTTGAG+AGG 0.589750 5:+2852659 None:intergenic
CATTCTCCATATTCTGCGAA+AGG 0.591746 5:+2852977 None:intergenic
TTCGCAGAATATGGAGAATG+TGG 0.594531 5:-2852974 MsG0580024277.01.T01:CDS
TCATTCTTGGTTCCACCATG+TGG 0.596200 5:+2852882 None:intergenic
GTGTCTCTGAAACCTCTCTA+GGG 0.596574 5:-2857331 MsG0580024277.01.T01:intron
TCCTCTCAACAAGTATAACC+GGG 0.600285 5:-2852660 MsG0580024277.01.T01:CDS
TTTCCAAAGCGAATCGACAA+CGG 0.608562 5:+2853056 None:intergenic
AAACCACAAACTCGAAGCAA+TGG 0.609119 5:-2853423 MsG0580024277.01.T01:CDS
TATGGGGTTGAGGTGCATTG+TGG 0.610097 5:+2857414 None:intergenic
CATGAAGATGTACCCTAGAG+AGG 0.616138 5:+2857319 None:intergenic
TGATGGAGTTGAGATTCATG+GGG 0.616747 5:-2853158 MsG0580024277.01.T01:CDS
ATCTTGTAAGGAGTGAGAAG+AGG 0.617615 5:+2857594 None:intergenic
ACTCCAATCCTGAAGAATTG+GGG 0.628524 5:-2852949 MsG0580024277.01.T01:CDS
ATGACTTCAGACTTGCTGCA+AGG 0.632428 5:-2853335 MsG0580024277.01.T01:CDS
TGCACCTATCTCATTCACAA+CGG 0.632442 5:+2853024 None:intergenic
TGAAGGTATCCAAACACACC+AGG 0.646546 5:-2854828 MsG0580024277.01.T01:intron
GACCGAACTGATAAATACGG+TGG 0.660628 5:-2853091 MsG0580024277.01.T01:CDS
TATTCTTTACTGCCACATGG+TGG 0.671403 5:-2852894 MsG0580024277.01.T01:CDS
GAGTAATACAAAGTAGTATG+GGG 0.673341 5:+2857398 None:intergenic
TAGCTAAGTTCACACCACCA+AGG 0.731237 5:-2853392 MsG0580024277.01.T01:CDS
TCTCAAAGGACTTCTCAAGG+AGG 0.766624 5:-2857377 MsG0580024277.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAATATTGTATTTATTT+AGG + Chr5:2857325-2857344 None:intergenic 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + Chr5:2853652-2853671 None:intergenic 10.0%
!! AAGAATATTGTATTTATTTA+GGG + Chr5:2857324-2857343 None:intergenic 10.0%
!! AATAATATGAAAGATTATAT+CGG + Chr5:2856730-2856749 None:intergenic 10.0%
!! AATTAATAATAAATTAGTTC+AGG - Chr5:2853946-2853965 MsG0580024277.01.T01:intron 10.0%
!! AATTGATATAAAAAAAATGT+AGG - Chr5:2855295-2855314 MsG0580024277.01.T01:intron 10.0%
!! ATAAAATCTATAATGAAATA+TGG + Chr5:2855957-2855976 None:intergenic 10.0%
!! ATTGATATAAAAAAAATGTA+GGG - Chr5:2855296-2855315 MsG0580024277.01.T01:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + Chr5:2853653-2853672 None:intergenic 10.0%
!! TCATATTCATATTATAATAA+TGG + Chr5:2855372-2855391 None:intergenic 10.0%
!!! GTAATTTGTTATAAATTTTT+GGG - Chr5:2854353-2854372 MsG0580024277.01.T01:intron 10.0%
!!! TATATTTCTTTTTTTTTTGA+AGG + Chr5:2854160-2854179 None:intergenic 10.0%
!!! TGTAATTTGTTATAAATTTT+TGG - Chr5:2854352-2854371 MsG0580024277.01.T01:intron 10.0%
!! AAAAAATATTAATGTGTCAA+TGG - Chr5:2854314-2854333 MsG0580024277.01.T01:intron 15.0%
!! AAAAATATTAATGTGTCAAT+GGG - Chr5:2854315-2854334 MsG0580024277.01.T01:intron 15.0%
!! AAATAACTTATAATTTGAGA+TGG - Chr5:2854931-2854950 MsG0580024277.01.T01:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + Chr5:2854427-2854446 None:intergenic 15.0%
!! AATTAGAGTTATATTGTATT+GGG + Chr5:2853587-2853606 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + Chr5:2853651-2853670 None:intergenic 15.0%
!! GATAAAAAAGTAATAAAATC+TGG - Chr5:2854649-2854668 MsG0580024277.01.T01:intron 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + Chr5:2853588-2853607 None:intergenic 15.0%
!! TTACTTAAAAAATCAGAATT+TGG + Chr5:2856619-2856638 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + Chr5:2854517-2854536 None:intergenic 15.0%
!!! AAGGATATAATTTTAATCTA+GGG + Chr5:2855029-2855048 None:intergenic 15.0%
!!! AATTAATCAAACTTTGTTTT+AGG + Chr5:2854492-2854511 None:intergenic 15.0%
!!! AGTAATTATTAGATTTTTCT+AGG + Chr5:2853245-2853264 None:intergenic 15.0%
!!! ATTTTGCAACAAAAAATTTA+GGG + Chr5:2854915-2854934 None:intergenic 15.0%
!!! CACATTAATATTTTTTTTAC+CGG + Chr5:2854310-2854329 None:intergenic 15.0%
!!! TATTTTGCAACAAAAAATTT+AGG + Chr5:2854916-2854935 None:intergenic 15.0%
!!! TTAATATTGTGTTTTAATCA+TGG - Chr5:2853292-2853311 MsG0580024277.01.T01:intron 15.0%
!! AAACAAATTTGAATTGAGTA+GGG - Chr5:2854779-2854798 MsG0580024277.01.T01:CDS 20.0%
!! AAATGTACATGATATATAGA+TGG + Chr5:2853098-2853117 None:intergenic 20.0%
!! ACATCATACAATAAATTAGA+CGG - Chr5:2852979-2852998 MsG0580024277.01.T01:CDS 20.0%
!! ACTAAAATAACATAAATGGA+GGG - Chr5:2855639-2855658 MsG0580024277.01.T01:intron 20.0%
!! AGAGCTATTAAAATTAAGTA+AGG - Chr5:2854841-2854860 MsG0580024277.01.T01:intron 20.0%
!! AGTGCAAAAAAACAAAATTA+GGG - Chr5:2854812-2854831 MsG0580024277.01.T01:CDS 20.0%
!! CTTACATATTTGTAAATACA+TGG - Chr5:2853794-2853813 MsG0580024277.01.T01:intron 20.0%
!! GATAATAGAAAAATGACATA+TGG - Chr5:2856496-2856515 MsG0580024277.01.T01:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - Chr5:2854778-2854797 MsG0580024277.01.T01:CDS 20.0%
!! TAGTGCAAAAAAACAAAATT+AGG - Chr5:2854811-2854830 MsG0580024277.01.T01:CDS 20.0%
!! TGATTCATTTCATTCATATA+TGG + Chr5:2856280-2856299 None:intergenic 20.0%
!! TGATTGAACAATTCTAAATT+TGG + Chr5:2856950-2856969 None:intergenic 20.0%
!! TGTATGATGTCAAATATAAT+GGG + Chr5:2852969-2852988 None:intergenic 20.0%
!! TTCATTCATATATGGTAATA+CGG + Chr5:2856272-2856291 None:intergenic 20.0%
!! TTGTATGATGTCAAATATAA+TGG + Chr5:2852970-2852989 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - Chr5:2854684-2854703 MsG0580024277.01.T01:intron 20.0%
!!! ACTCAATTTTATTTGCATTT+AGG - Chr5:2855588-2855607 MsG0580024277.01.T01:intron 20.0%
!!! AGGATATAATTTTAATCTAG+GGG + Chr5:2855028-2855047 None:intergenic 20.0%
!!! ATATTTCAACTTTAGTTTAC+AGG + Chr5:2853449-2853468 None:intergenic 20.0%
!!! ATATTTGAAACCAATTTGTA+TGG - Chr5:2853137-2853156 MsG0580024277.01.T01:CDS 20.0%
!!! GAAGGATATAATTTTAATCT+AGG + Chr5:2855030-2855049 None:intergenic 20.0%
!!! GACACTTTTTTTTAGTAAAT+GGG + Chr5:2853518-2853537 None:intergenic 20.0%
!!! GATGATATTTATTCATGTTT+TGG - Chr5:2854049-2854068 MsG0580024277.01.T01:intron 20.0%
!!! TCTTCTTAGTATTTTTCTTT+TGG - Chr5:2853369-2853388 MsG0580024277.01.T01:CDS 20.0%
!!! TTAGAGATTTGATTTCTAAT+TGG - Chr5:2854020-2854039 MsG0580024277.01.T01:intron 20.0%
!!! TTTTGGGTTAATTATGTTTT+TGG - Chr5:2854369-2854388 MsG0580024277.01.T01:intron 20.0%
! ACAAAAGAATATACCTTCTT+TGG + Chr5:2855485-2855504 None:intergenic 25.0%
! AGAGTAATACAAAGTAGTAT+GGG + Chr5:2852837-2852856 None:intergenic 25.0%
! AGCCAATTAATATAGTTTGA+AGG - Chr5:2855708-2855727 MsG0580024277.01.T01:intron 25.0%
! ATAGAAAAATGACATATGGT+AGG - Chr5:2856500-2856519 MsG0580024277.01.T01:intron 25.0%
! ATATGATATGATGTGAATGA+AGG - Chr5:2855386-2855405 MsG0580024277.01.T01:intron 25.0%
! GACTAAAATAACATAAATGG+AGG - Chr5:2855638-2855657 MsG0580024277.01.T01:intron 25.0%
! GCAGACTAAAATAACATAAA+TGG - Chr5:2855635-2855654 MsG0580024277.01.T01:intron 25.0%
! GCCAATTAATATAGTTTGAA+GGG - Chr5:2855709-2855728 MsG0580024277.01.T01:intron 25.0%
! TAATAAATCATAAAACGTGC+CGG - Chr5:2854288-2854307 MsG0580024277.01.T01:intron 25.0%
! TAGAATGTTTGTTCTTTAAG+AGG - Chr5:2856991-2857010 MsG0580024277.01.T01:intron 25.0%
! TATCAAAGTTGCTCATAATT+TGG + Chr5:2854103-2854122 None:intergenic 25.0%
! TCAGATTCATTCATTTAAAC+TGG + Chr5:2855776-2855795 None:intergenic 25.0%
! TCCCTTCAAACTATATTAAT+TGG + Chr5:2855713-2855732 None:intergenic 25.0%
! TCTTTCATATTATTCTGAAC+AGG - Chr5:2856736-2856755 MsG0580024277.01.T01:intron 25.0%
! TGCATCTAGATATATATAGT+TGG + Chr5:2855133-2855152 None:intergenic 25.0%
!! AATTTCAAATTTTCAGTGCT+TGG - Chr5:2852733-2852752 MsG0580024277.01.T01:CDS 25.0%
!! AGATTTGATTTCTAATTGGA+GGG - Chr5:2854024-2854043 MsG0580024277.01.T01:intron 25.0%
!! GTATATTCTTTTGTCAGATT+TGG - Chr5:2855491-2855510 MsG0580024277.01.T01:intron 25.0%
!! TCAGTAATAGTTTTCATTCT+TGG + Chr5:2857365-2857384 None:intergenic 25.0%
!! TCTTAGTATTTTTCTTTTGG+TGG - Chr5:2853372-2853391 MsG0580024277.01.T01:CDS 25.0%
!! TTAAATTTTCCCATCTTGTA+AGG + Chr5:2852652-2852671 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG + Chr5:2853541-2853560 None:intergenic 25.0%
!! TTTCTAGTCCCTATAAAATA+GGG + Chr5:2854883-2854902 None:intergenic 25.0%
!!! AAAAAGACAATTAGCTTGTA+TGG + Chr5:2853877-2853896 None:intergenic 25.0%
!!! AAGTATCTTGCTATTAACAA+AGG - Chr5:2855261-2855280 MsG0580024277.01.T01:intron 25.0%
!!! AATCAAACTTTGTTTTAGGA+GGG + Chr5:2854488-2854507 None:intergenic 25.0%
!!! ATAGCTATTTTGATTTGATG+AGG + Chr5:2855559-2855578 None:intergenic 25.0%
!!! ATATAATTTTAATCTAGGGG+AGG + Chr5:2855025-2855044 None:intergenic 25.0%
!!! ATTTTTAGAGTAGGATTTCA+GGG + Chr5:2856081-2856100 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGTAAA+TGG + Chr5:2853519-2853538 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGG+AGG + Chr5:2854489-2854508 None:intergenic 25.0%
!!! TATAATTTTAATCTAGGGGA+GGG + Chr5:2855024-2855043 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG + Chr5:2853540-2853559 None:intergenic 25.0%
AAACCAATTTGTATGGCTAA+TGG - Chr5:2853144-2853163 MsG0580024277.01.T01:CDS 30.0%
AAGTAAGGACTAAACTTAAG+AGG - Chr5:2854856-2854875 MsG0580024277.01.T01:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + Chr5:2854412-2854431 None:intergenic 30.0%
AATGACCGAACTGATAAATA+CGG - Chr5:2857137-2857156 MsG0580024277.01.T01:intron 30.0%
AATGATACCTGTCTTCATAA+AGG - Chr5:2856098-2856117 MsG0580024277.01.T01:intron 30.0%
AGTCAGTTAACACAATTTAG+AGG - Chr5:2853033-2853052 MsG0580024277.01.T01:CDS 30.0%
CAAGATTAGAACACTATGAA+AGG - Chr5:2854551-2854570 MsG0580024277.01.T01:intron 30.0%
CATATATGGTAATACGGTAT+GGG + Chr5:2856266-2856285 None:intergenic 30.0%
CTACTTTGTATTACTCTCAA+AGG - Chr5:2852840-2852859 MsG0580024277.01.T01:CDS 30.0%
GAGAGTAATACAAAGTAGTA+TGG + Chr5:2852838-2852857 None:intergenic 30.0%
GAGTAATACAAAGTAGTATG+GGG + Chr5:2852836-2852855 None:intergenic 30.0%
GTTTGCATTTCGACAAAAAA+GGG + Chr5:2856451-2856470 None:intergenic 30.0%
TATCCATTAGCCATACAAAT+TGG + Chr5:2853150-2853169 None:intergenic 30.0%
TCATATATGGTAATACGGTA+TGG + Chr5:2856267-2856286 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + Chr5:2853644-2853663 None:intergenic 30.0%
TTATATCGGTATAAATCGAC+AGG + Chr5:2856716-2856735 None:intergenic 30.0%
! AACAACTCTAAAAATGGGAA+TGG + Chr5:2852768-2852787 None:intergenic 30.0%
! ATCAAAGTATTAGACTCTAC+TGG + Chr5:2856396-2856415 None:intergenic 30.0%
! ATCTGTCCTATTTTCAACTA+TGG + Chr5:2857486-2857505 None:intergenic 30.0%
! GAGATTTGATTTCTAATTGG+AGG - Chr5:2854023-2854042 MsG0580024277.01.T01:intron 30.0%
! GATTTGATTTCTAATTGGAG+GGG - Chr5:2854025-2854044 MsG0580024277.01.T01:intron 30.0%
! GCCAAAACAACTCTAAAAAT+GGG + Chr5:2852773-2852792 None:intergenic 30.0%
! GTTCTTCTTTGTATTTTGCT+AGG - Chr5:2853405-2853424 MsG0580024277.01.T01:CDS 30.0%
! TAAGAGGTCCCTATTTTATA+GGG - Chr5:2854872-2854891 MsG0580024277.01.T01:intron 30.0%
! TCTTTAGACAGAGATTTGTT+TGG + Chr5:2855052-2855071 None:intergenic 30.0%
! TGCCAAAACAACTCTAAAAA+TGG + Chr5:2852774-2852793 None:intergenic 30.0%
! TGCTAGGATCAATGAAATTT+TGG - Chr5:2853421-2853440 MsG0580024277.01.T01:CDS 30.0%
! TTAAGAGGTCCCTATTTTAT+AGG - Chr5:2854871-2854890 MsG0580024277.01.T01:intron 30.0%
! TTGCTCATAATTTGGAACAA+AGG + Chr5:2854095-2854114 None:intergenic 30.0%
!! AACTATAAAAGTGCCATTGA+AGG + Chr5:2857429-2857448 None:intergenic 30.0%
!! ATAATTTTAATCTAGGGGAG+GGG + Chr5:2855023-2855042 None:intergenic 30.0%
!! GAAAAGATCAAGTTGAAACT+TGG - Chr5:2855434-2855453 MsG0580024277.01.T01:intron 30.0%
!! GTTTCTAGTCCCTATAAAAT+AGG + Chr5:2854884-2854903 None:intergenic 30.0%
!!! ACAGGTATCATTTTTAGAGT+AGG + Chr5:2856090-2856109 None:intergenic 30.0%
!!! CATTTTTAGAGTAGGATTTC+AGG + Chr5:2856082-2856101 None:intergenic 30.0%
!!! TCCCATTTTTAGAGTTGTTT+TGG - Chr5:2852769-2852788 MsG0580024277.01.T01:CDS 30.0%
!!! TTTTCTTTTGGTGGTGTAAA+CGG - Chr5:2853381-2853400 MsG0580024277.01.T01:CDS 30.0%
ACTTAAGAGTTAAGCCAGTA+AGG + Chr5:2856313-2856332 None:intergenic 35.0%
AGCAAACTGACATTCATCAA+TGG + Chr5:2855835-2855854 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG + Chr5:2853505-2853524 None:intergenic 35.0%
AGTAAGTAAAGTGTGTGTGA+AGG + Chr5:2852704-2852723 None:intergenic 35.0%
ATATAAAGCCCCAATTCTTC+AGG + Chr5:2857293-2857312 None:intergenic 35.0%
ATCAAATCCATTGACCTTAC+TGG - Chr5:2856296-2856315 MsG0580024277.01.T01:intron 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - Chr5:2853673-2853692 MsG0580024277.01.T01:intron 35.0%
ATGACATATGGTAGGATACT+AGG - Chr5:2856508-2856527 MsG0580024277.01.T01:intron 35.0%
CAATATTCTTTACTGCCACA+TGG - Chr5:2857334-2857353 MsG0580024277.01.T01:CDS 35.0%
CGTTTGCATTTCGACAAAAA+AGG + Chr5:2856452-2856471 None:intergenic 35.0%
CTTTCATAAACTGCTCAATC+AGG + Chr5:2857109-2857128 None:intergenic 35.0%
GAACAGGTTATCAACCAAAT+GGG - Chr5:2856752-2856771 MsG0580024277.01.T01:intron 35.0%
GACAATCTGAGGAATTTCAT+AGG + Chr5:2856875-2856894 None:intergenic 35.0%
GCATGAACAGCATCTATAAT+GGG + Chr5:2855463-2855482 None:intergenic 35.0%
GTAATGTACCAACATACTTG+TGG - Chr5:2857029-2857048 MsG0580024277.01.T01:intron 35.0%
TAGAATCTCTGTCTAGTCAA+TGG + Chr5:2852797-2852816 None:intergenic 35.0%
TAGTCTGTATAACCATGAAC+AGG + Chr5:2857617-2857636 None:intergenic 35.0%
TATACAGACTACCCATTTCT+TGG - Chr5:2857626-2857645 MsG0580024277.01.T01:CDS 35.0%
TCGATGCCATAGTTGAAAAT+AGG - Chr5:2857477-2857496 MsG0580024277.01.T01:intron 35.0%
TGAACAGGTTATCAACCAAA+TGG - Chr5:2856751-2856770 MsG0580024277.01.T01:intron 35.0%
TTCCACCGTATTTATCAGTT+CGG + Chr5:2857145-2857164 None:intergenic 35.0%
TTCTAGTCCTTTATGAAGAC+AGG + Chr5:2856108-2856127 None:intergenic 35.0%
TTGATGGAGTTGAGATTCAT+GGG - Chr5:2857072-2857091 MsG0580024277.01.T01:intron 35.0%
TTTGATGGAGTTGAGATTCA+TGG - Chr5:2857071-2857090 MsG0580024277.01.T01:intron 35.0%
! AATGGCACTTTTATAGTTGC+CGG - Chr5:2857431-2857450 MsG0580024277.01.T01:CDS 35.0%
! ACTAGAAGCAATGTTTTCCT+GGG - Chr5:2856121-2856140 MsG0580024277.01.T01:intron 35.0%
! CTCTAAAAATGGGAATGGTT+AGG + Chr5:2852763-2852782 None:intergenic 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + Chr5:2854396-2854415 None:intergenic 35.0%
! TAGACAGAGATTTGTTTGGA+AGG + Chr5:2855048-2855067 None:intergenic 35.0%
! TGAAGAATTGGGGCTTTATA+TGG - Chr5:2857292-2857311 MsG0580024277.01.T01:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + Chr5:2854397-2854416 None:intergenic 35.0%
! TTCTTTTGTCAGATTTGGCA+TGG - Chr5:2855496-2855515 MsG0580024277.01.T01:intron 35.0%
!! ATAACCATTGATTTGACTCG+AGG + Chr5:2855185-2855204 None:intergenic 35.0%
!! ATAGTTTGCTAAGCCATTTG+TGG - Chr5:2856174-2856193 MsG0580024277.01.T01:intron 35.0%
!! GACTTGTTAGTAGAAGAGAT+TGG + Chr5:2856784-2856803 None:intergenic 35.0%
!! TAATTTTAATCTAGGGGAGG+GGG + Chr5:2855022-2855041 None:intergenic 35.0%
!! TCGACAAAAAAGGGTTTTGA+AGG + Chr5:2856442-2856461 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG - Chr5:2854687-2854706 MsG0580024277.01.T01:intron 35.0%
AAACCACAAACTCGAAGCAA+TGG - Chr5:2856808-2856827 MsG0580024277.01.T01:intron 40.0%
ACTCCAATCCTGAAGAATTG+GGG - Chr5:2857282-2857301 MsG0580024277.01.T01:intron 40.0%
AGACTCCAATCCTGAAGAAT+TGG - Chr5:2857280-2857299 MsG0580024277.01.T01:intron 40.0%
AGTTAAGCCAGTAAGGTCAA+TGG + Chr5:2856306-2856325 None:intergenic 40.0%
AGTTGAATGTCTTCACAGCT+TGG - Chr5:2857388-2857407 MsG0580024277.01.T01:CDS 40.0%
ATCTCACGTGGTTAACACAT+CGG - Chr5:2855905-2855924 MsG0580024277.01.T01:intron 40.0%
ATCTTGTAAGGAGTGAGAAG+AGG + Chr5:2852640-2852659 None:intergenic 40.0%
ATGTACCAACATACTTGTGG+TGG - Chr5:2857032-2857051 MsG0580024277.01.T01:intron 40.0%
CATTCTCCATATTCTGCGAA+AGG + Chr5:2857257-2857276 None:intergenic 40.0%
CTCCTCTCAACAAGTATAAC+CGG - Chr5:2857570-2857589 MsG0580024277.01.T01:CDS 40.0%
CTGAAGTCATTGACAATCTG+AGG + Chr5:2856886-2856905 None:intergenic 40.0%
CTTCTCACTCCTTACAAGAT+GGG - Chr5:2852640-2852659 MsG0580024277.01.T01:CDS 40.0%
CTTCTCATAGCTGAATCTAC+TGG - Chr5:2852878-2852897 MsG0580024277.01.T01:CDS 40.0%
CTTTCCTCGAGTCAAATCAA+TGG - Chr5:2855178-2855197 MsG0580024277.01.T01:intron 40.0%
GACTCCAATCCTGAAGAATT+GGG - Chr5:2857281-2857300 MsG0580024277.01.T01:intron 40.0%
GAGGAATTTCATAGGTCCTT+AGG + Chr5:2856867-2856886 None:intergenic 40.0%
GCAAACTATCCAACTCAAAC+AGG + Chr5:2856163-2856182 None:intergenic 40.0%
GGCATGAACAGCATCTATAA+TGG + Chr5:2855464-2855483 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG + Chr5:2853504-2853523 None:intergenic 40.0%
TAAGCCATTTGTGGAAGCAA+GGG - Chr5:2856183-2856202 MsG0580024277.01.T01:intron 40.0%
TAAGGAGTGAGAAGAGGAAT+GGG + Chr5:2852634-2852653 None:intergenic 40.0%
TACAAAGTAGTATGGGGTTG+AGG + Chr5:2852830-2852849 None:intergenic 40.0%
TACACATCTGATCCTGTTCA+TGG - Chr5:2857602-2857621 MsG0580024277.01.T01:CDS 40.0%
TACTCTCAAAGGACTTCTCA+AGG - Chr5:2852851-2852870 MsG0580024277.01.T01:CDS 40.0%
TATTCTTTACTGCCACATGG+TGG - Chr5:2857337-2857356 MsG0580024277.01.T01:CDS 40.0%
TCCTCTCAACAAGTATAACC+GGG - Chr5:2857571-2857590 MsG0580024277.01.T01:CDS 40.0%
TCTTCTCACTCCTTACAAGA+TGG - Chr5:2852639-2852658 MsG0580024277.01.T01:CDS 40.0%
TGATGGAGTTGAGATTCATG+GGG - Chr5:2857073-2857092 MsG0580024277.01.T01:intron 40.0%
TGCACCTATCTCATTCACAA+CGG + Chr5:2857210-2857229 None:intergenic 40.0%
TGTCAGTCAGTGCAAGAAAT+TGG - Chr5:2856537-2856556 MsG0580024277.01.T01:intron 40.0%
TTATCGCCTTTCGCAGAATA+TGG - Chr5:2857248-2857267 MsG0580024277.01.T01:intron 40.0%
TTCGCAGAATATGGAGAATG+TGG - Chr5:2857257-2857276 MsG0580024277.01.T01:intron 40.0%
TTTCCAAAGCGAATCGACAA+CGG + Chr5:2857178-2857197 None:intergenic 40.0%
! AGGACAGATCTTGTTGCTTA+TGG - Chr5:2857497-2857516 MsG0580024277.01.T01:intron 40.0%
! CAAACTGGCTCAGATATACT+GGG - Chr5:2853688-2853707 MsG0580024277.01.T01:intron 40.0%
! CAATGTTTTCCTGGGATGAA+GGG - Chr5:2856129-2856148 MsG0580024277.01.T01:intron 40.0%
! GACTAGAAGCAATGTTTTCC+TGG - Chr5:2856120-2856139 MsG0580024277.01.T01:intron 40.0%
! GATGAATGTCAGTTTGCTCT+CGG - Chr5:2855837-2855856 MsG0580024277.01.T01:intron 40.0%
! TGATCTTTTCTCCAAATGCC+TGG + Chr5:2855424-2855443 None:intergenic 40.0%
! TTTTGTCAGATTTGGCATGG+TGG - Chr5:2855499-2855518 MsG0580024277.01.T01:intron 40.0%
AAATGCAAACGCGAAAGGCA+TGG - Chr5:2856461-2856480 MsG0580024277.01.T01:intron 45.0%
AAGCCCCAATTCTTCAGGAT+TGG + Chr5:2857288-2857307 None:intergenic 45.0%
ACGGAGGGAGTAACACATTT+GGG - Chr5:2853711-2853730 MsG0580024277.01.T01:intron 45.0%
AGGAAATGACAGACAGAAGC+AGG + Chr5:2856422-2856441 None:intergenic 45.0%
AGGTTATCAACCAAATGGGC+AGG - Chr5:2856756-2856775 MsG0580024277.01.T01:intron 45.0%
ATCCAAACACACCAGGCATT+TGG - Chr5:2855410-2855429 MsG0580024277.01.T01:intron 45.0%
ATCCTCTCCTTTCTCATCCA+TGG + Chr5:2856218-2856237 None:intergenic 45.0%
CATGAAGATGTACCCTAGAG+AGG + Chr5:2852915-2852934 None:intergenic 45.0%
CATTCATGCTGTCAGCACAT+CGG + Chr5:2856028-2856047 None:intergenic 45.0%
CCAATGAGAAAGGCCTTCAA+TGG - Chr5:2857413-2857432 MsG0580024277.01.T01:CDS 45.0%
CCAGTATATCTGAGCCAGTT+TGG + Chr5:2853690-2853709 None:intergenic 45.0%
CCATTGAAGGCCTTTCTCAT+TGG + Chr5:2857416-2857435 None:intergenic 45.0%
CTAAGCCATTTGTGGAAGCA+AGG - Chr5:2856182-2856201 MsG0580024277.01.T01:intron 45.0%
GAAATCATGACCGTCTGATC+TGG - Chr5:2855990-2856009 MsG0580024277.01.T01:intron 45.0%
GAAGCCGTTGTGAATGAGAT+AGG - Chr5:2857203-2857222 MsG0580024277.01.T01:intron 45.0%
GACCGAACTGATAAATACGG+TGG - Chr5:2857140-2857159 MsG0580024277.01.T01:intron 45.0%
GAGATAGGTGCAGAAAGAGT+TGG - Chr5:2857218-2857237 MsG0580024277.01.T01:intron 45.0%
GAGTAAGGACCTGTTTGAGT+TGG - Chr5:2856151-2856170 MsG0580024277.01.T01:intron 45.0%
GATGCTGTTCATGCCAAAGA+AGG - Chr5:2855469-2855488 MsG0580024277.01.T01:intron 45.0%
GCGAATCTCTTTGGCAAATC+TGG + Chr5:2857542-2857561 None:intergenic 45.0%
GCTGCAGTGTACTTGTCATT+TGG + Chr5:2853907-2853926 None:intergenic 45.0%
GGAAATGGCTGGTGCATTAA+CGG - Chr5:2852603-2852622 MsG0580024277.01.T01:CDS 45.0%
GTAAGGAGTGAGAAGAGGAA+TGG + Chr5:2852635-2852654 None:intergenic 45.0%
TAATAATACTCCCTCCGTCC+CGG - Chr5:2853483-2853502 MsG0580024277.01.T01:intron 45.0%
TAGCTAAGTTCACACCACCA+AGG - Chr5:2856839-2856858 MsG0580024277.01.T01:intron 45.0%
TCATTCTTGGTTCCACCATG+TGG + Chr5:2857352-2857371 None:intergenic 45.0%
TCTCAAAGGACTTCTCAAGG+AGG - Chr5:2852854-2852873 MsG0580024277.01.T01:CDS 45.0%
TGTCGAAATGCAAACGCGAA+AGG - Chr5:2856456-2856475 MsG0580024277.01.T01:intron 45.0%
! ATGCCATTGCTTCGAGTTTG+TGG + Chr5:2856814-2856833 None:intergenic 45.0%
! CCAAACTGGCTCAGATATAC+TGG - Chr5:2853687-2853706 MsG0580024277.01.T01:intron 45.0%
! CGAATCGACAACGGTTTTCA+AGG + Chr5:2857169-2857188 None:intergenic 45.0%
! GCAATGTTTTCCTGGGATGA+AGG - Chr5:2856128-2856147 MsG0580024277.01.T01:intron 45.0%
! TCAGATTTGGCATGGTGGAA+GGG - Chr5:2855504-2855523 MsG0580024277.01.T01:intron 45.0%
! TCCCGGTTATACTTGTTGAG+AGG + Chr5:2857575-2857594 None:intergenic 45.0%
!! AAACCGTTGTCGATTCGCTT+TGG - Chr5:2857172-2857191 MsG0580024277.01.T01:intron 45.0%
!! ATGACTTCAGACTTGCTGCA+AGG - Chr5:2856896-2856915 MsG0580024277.01.T01:intron 45.0%
!! GCGCAAATTGCAGGTTTTGA+TGG - Chr5:2857056-2857075 MsG0580024277.01.T01:intron 45.0%
!! GTGTCTCTGAAACCTCTCTA+GGG - Chr5:2852900-2852919 MsG0580024277.01.T01:CDS 45.0%
!! TGAAGGTATCCAAACACACC+AGG - Chr5:2855403-2855422 MsG0580024277.01.T01:intron 45.0%
!!! AAAAAATTGATATTTTTTAT+AGG - Chr5:2855327-2855346 MsG0580024277.01.T01:intron 5.0%
!!! ATAAGTAAATTTTTTTTATA+GGG + Chr5:2854456-2854475 None:intergenic 5.0%
!!! ATTTTTTTTATATCAATTTT+TGG + Chr5:2855293-2855312 None:intergenic 5.0%
!!! TAATTATATTTTTAATTGTA+AGG + Chr5:2853931-2853950 None:intergenic 5.0%
!!! TATAAGTAAATTTTTTTTAT+AGG + Chr5:2854457-2854476 None:intergenic 5.0%
ATCTTGTCGCGAATAGCCTC+CGG + Chr5:2857453-2857472 None:intergenic 50.0%
ATGGGTCAGATATTCCGGGA+CGG + Chr5:2853500-2853519 None:intergenic 50.0%
CAGATGTGTAGAACGTCTCC+CGG + Chr5:2857592-2857611 None:intergenic 50.0%
CCATCCCTTGCTTCCACAAA+TGG + Chr5:2856190-2856209 None:intergenic 50.0%
CCATTTGTGGAAGCAAGGGA+TGG - Chr5:2856187-2856206 MsG0580024277.01.T01:intron 50.0%
CGGAGGGAGTAACACATTTG+GGG - Chr5:2853712-2853731 MsG0580024277.01.T01:intron 50.0%
CTCAGATATACTGGGACGGA+GGG - Chr5:2853696-2853715 MsG0580024277.01.T01:intron 50.0%
CTCCAAATGCCTGGTGTGTT+TGG + Chr5:2855415-2855434 None:intergenic 50.0%
CTGGCTCAGATATACTGGGA+CGG - Chr5:2853692-2853711 MsG0580024277.01.T01:intron 50.0%
GACGGAGGGAGTAACACATT+TGG - Chr5:2853710-2853729 MsG0580024277.01.T01:intron 50.0%
GAGGCTATTCGCGACAAGAT+GGG - Chr5:2857453-2857472 MsG0580024277.01.T01:CDS 50.0%
GCAAGGAATGCTATAGCAGC+TGG - Chr5:2856913-2856932 MsG0580024277.01.T01:intron 50.0%
GCCATTGGAACCAGATCAGA+CGG + Chr5:2856003-2856022 None:intergenic 50.0%
GCTTGCACAACAATCTCACG+TGG - Chr5:2855893-2855912 MsG0580024277.01.T01:intron 50.0%
GGTGGAAGGGCTTCTAATTC+AGG - Chr5:2855517-2855536 MsG0580024277.01.T01:intron 50.0%
GGTTCTGCCATGGATGAGAA+AGG - Chr5:2856208-2856227 MsG0580024277.01.T01:intron 50.0%
GTTGAGATTCATGGGGCTCA+CGG - Chr5:2857080-2857099 MsG0580024277.01.T01:intron 50.0%
TATGGGGTTGAGGTGCATTG+TGG + Chr5:2852820-2852839 None:intergenic 50.0%
TCACGTGGTTAACACATCGG+TGG - Chr5:2855908-2855927 MsG0580024277.01.T01:intron 50.0%
TGCCATGGATGAGAAAGGAG+AGG - Chr5:2856213-2856232 MsG0580024277.01.T01:intron 50.0%
TTCCTGGGATGAAGGGAGTA+AGG - Chr5:2856136-2856155 MsG0580024277.01.T01:intron 50.0%
TTTAATCTAGGGGAGGGGGA+AGG + Chr5:2855018-2855037 None:intergenic 50.0%
! ACCGTCTGATCTGGTTCCAA+TGG - Chr5:2855999-2856018 MsG0580024277.01.T01:intron 50.0%
! ATGTCAGTTTGCTCTCGGCA+AGG - Chr5:2855842-2855861 MsG0580024277.01.T01:intron 50.0%
! GGCACTTTTATAGTTGCCGG+AGG - Chr5:2857434-2857453 MsG0580024277.01.T01:CDS 50.0%
! GTCAGATTTGGCATGGTGGA+AGG - Chr5:2855503-2855522 MsG0580024277.01.T01:intron 50.0%
!! CAGCTTGGTGCCAATGAGAA+AGG - Chr5:2857403-2857422 MsG0580024277.01.T01:CDS 50.0%
!! GGTGTCTCTGAAACCTCTCT+AGG - Chr5:2852899-2852918 MsG0580024277.01.T01:CDS 50.0%
GCATCGAGCGCGAATCTCTT+TGG + Chr5:2857551-2857570 None:intergenic 55.0%
GCGCACCACCACAAGTATGT+TGG + Chr5:2857040-2857059 None:intergenic 55.0%
GCTCAGATATACTGGGACGG+AGG - Chr5:2853695-2853714 MsG0580024277.01.T01:intron 55.0%
GGAGGCTATTCGCGACAAGA+TGG - Chr5:2857452-2857471 MsG0580024277.01.T01:CDS 55.0%
GTCAGATATTCCGGGACGGA+GGG + Chr5:2853496-2853515 None:intergenic 55.0%
GTCAGCACATCGGTAGCCAT+TGG + Chr5:2856018-2856037 None:intergenic 55.0%
GTCCTTACTCCCTTCATCCC+AGG + Chr5:2856141-2856160 None:intergenic 55.0%
TCATAGGTCCTTAGGCGCCT+TGG + Chr5:2856859-2856878 None:intergenic 55.0%
! AGCAAGGGATGGTTCTGCCA+TGG - Chr5:2856198-2856217 MsG0580024277.01.T01:intron 55.0%
! GAGATTGGTGCCTGCCCATT+TGG + Chr5:2856769-2856788 None:intergenic 55.0%
! TGTGGTGGTGCGCAAATTGC+AGG - Chr5:2857047-2857066 MsG0580024277.01.T01:intron 55.0%
CTAGGGGAGGGGGAAGGAAA+TGG + Chr5:2855012-2855031 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + Chr5:2853497-2853516 None:intergenic 60.0%
TAGGTCCTTAGGCGCCTTGG+TGG + Chr5:2856856-2856875 None:intergenic 60.0%
! TCACACCACCAAGGCGCCTA+AGG - Chr5:2856848-2856867 MsG0580024277.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 2852601 2857652 2852601 ID=MsG0580024277.01;Name=MsG0580024277.01
Chr5 mRNA 2852601 2857652 2852601 ID=MsG0580024277.01.T01;Parent=MsG0580024277.01;Name=MsG0580024277.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|1|1|5|0|371
Chr5 exon 2857570 2857652 2857570 ID=MsG0580024277.01.T01:exon:970;Parent=MsG0580024277.01.T01
Chr5 exon 2857332 2857472 2857332 ID=MsG0580024277.01.T01:exon:969;Parent=MsG0580024277.01.T01
Chr5 exon 2854715 2854845 2854715 ID=MsG0580024277.01.T01:exon:968;Parent=MsG0580024277.01.T01
Chr5 exon 2853319 2853495 2853319 ID=MsG0580024277.01.T01:exon:967;Parent=MsG0580024277.01.T01
Chr5 exon 2852601 2853184 2852601 ID=MsG0580024277.01.T01:exon:966;Parent=MsG0580024277.01.T01
Chr5 CDS 2857570 2857652 2857570 ID=MsG0580024277.01.T01:cds;Parent=MsG0580024277.01.T01
Chr5 CDS 2857332 2857472 2857332 ID=MsG0580024277.01.T01:cds;Parent=MsG0580024277.01.T01
Chr5 CDS 2854715 2854845 2854715 ID=MsG0580024277.01.T01:cds;Parent=MsG0580024277.01.T01
Chr5 CDS 2853319 2853495 2853319 ID=MsG0580024277.01.T01:cds;Parent=MsG0580024277.01.T01
Chr5 CDS 2852601 2853184 2852601 ID=MsG0580024277.01.T01:cds;Parent=MsG0580024277.01.T01
Gene Sequence

>MsG0580024277.01.T01

ATGGAAATGGCTGGTGCATTAACGGTTGATCCCATTCCTCTTCTCACTCCTTACAAGATGGGAAAATTTAATCTATCTCATAAAGTTGTTTTGGCACCATTGACTAGACAGAGATTCTACCACAATGCACCTCAACCCCATACTACTTTGTATTACTCTCAAAGGACTTCTCAAGGAGGTCTTCTCATAGCTGAATCTACTGGTGTCTCTGAAACCTCTCTAGGGTATCCAAACACACCAGGCATTTGGAGAAAAGATCAAGTTGAAACTTGGAAACCCATTATAGATGCTGTTCATGCCAAAGAAGGTATATTCTTTTGTCAGATTTGGCATGGTGGAAGGGCTTCTAATTCAGGTTATCAACCAAATGGGCAGGCACCAATCTCTTCTACTAACAAGTCACTCAAACCACAAACTCGAAGCAATGGCATTGATATAGCTAAGTTCACACCACCAAGGCGCCTAAGGACCTATGAAATTCCTCAGATTGTCAATGACTTCAGACTTGCTGCAAGGAATGCTATAGCAGCTGGTTTTGATGGAGTTGAGATTCATGGGGCTCACGGTTACCTGATTGAGCAGTTTATGAAAGATAAAGTGAATGACCGAACTGATAAATACGGTGGAAACCTTGAAAACCGTTGTCGATTCGCTTTGGAAATTGTTGAAGCCGTTGTGAATGAGATAGGTGCAGAAAGAGTTGGTATTAGATTATCGCCTTTCGCAGAATATGGAGAATGTGGAGACTCCAATCCTGAAGAATTGGGGCTTTATATGGTTAATGCCCTAAATAAATACAATATTCTTTACTGCCACATGGTGGAACCAAGAATGAAAACTATTACTGAAAAAGTTGAATGTCTTCACAGCTTGGTGCCAATGAGAAAGGCCTTCAATGGCACTTTTATAGTTGCCGGAGGCTATTCGCGACAAGATGGGATCGATGCCATAGTTGAAAATAGGACAGATCTTGTTGCTTATGGTCGCTTGTTTATATCTAATCCAGATTTGCCAAAGAGATTCGCGCTCGATGCTCCTCTCAACAAGTATAACCGGGAGACGTTCTACACATCTGATCCTGTTCATGGTTATACAGACTACCCATTTCTTGGTTAA
Protein sequence

>MsG0580024277.01.T01

MEMAGALTVDPIPLLTPYKMGKFNLSHKVVLAPLTRQRFYHNAPQPHTTLYYSQRTSQGGLLIAESTGVSETSLGYPNTPGIWRKDQVETWKPIIDAVHAKEGIFFCQIWHGGRASNSGYQPNGQAPISSTNKSLKPQTRSNGIDIAKFTPPRRLRTYEIPQIVNDFRLAARNAIAAGFDGVEIHGAHGYLIEQFMKDKVNDRTDKYGGNLENRCRFALEIVEAVVNEIGAERVGIRLSPFAEYGECGDSNPEELGLYMVNALNKYNILYCHMVEPRMKTITEKVECLHSLVPMRKAFNGTFIVAGGYSRQDGIDAIVENRTDLVAYGRLFISNPDLPKRFALDAPLNKYNRETFYTSDPVHGYTDYPFLG*