AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024739.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024739.01.T01 MTR_5g015580 99.617 261 1 0 50 310 16 276 0.0 514
MsG0580024739.01.T01 MTR_1g018205 55.172 261 117 0 50 310 17 277 1.01e-99 295
MsG0580024739.01.T01 MTR_7g009330 48.276 261 135 0 50 310 17 277 1.03e-79 243
MsG0580024739.01.T01 MTR_6g011390 46.388 263 139 1 50 310 16 278 2.03e-79 243
MsG0580024739.01.T01 MTR_4g128300 42.045 264 150 2 50 310 16 279 2.79e-66 209
MsG0580024739.01.T01 MTR_8g469150 38.662 269 163 1 42 310 10 276 2.69e-64 204
MsG0580024739.01.T01 MTR_8g469150 37.308 260 161 1 42 301 10 267 1.09e-58 190
MsG0580024739.01.T01 MTR_4g107840 28.141 199 134 3 119 310 48 244 4.59e-23 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024739.01.T01 AT5G67500 64.751 261 92 0 50 310 16 276 6.36e-128 366
MsG0580024739.01.T01 AT5G67500 58.681 288 92 1 50 310 16 303 8.88e-122 352
MsG0580024739.01.T01 AT5G67500 64.286 252 90 0 50 301 16 267 1.66e-121 351
MsG0580024739.01.T01 AT5G15090 48.289 263 130 2 50 310 16 274 1.58e-78 240
MsG0580024739.01.T01 AT5G15090 48.289 263 130 2 50 310 16 274 1.58e-78 240
MsG0580024739.01.T01 AT3G01280 46.743 261 139 0 50 310 16 276 8.01e-77 236
MsG0580024739.01.T01 AT5G57490 45.594 261 140 1 50 310 16 274 1.49e-75 233
MsG0580024739.01.T01 AT3G49920 45.594 261 92 3 50 310 16 226 8.71e-70 216
MsG0580024739.01.T01 AT3G49920 59.701 67 27 0 50 116 16 82 1.04e-17 78.2
MsG0580024739.01.T01 AT3G49920 59.701 67 27 0 50 116 16 82 1.04e-17 78.2
MsG0580024739.01.T01 AT3G49920 62.069 58 22 0 50 107 16 73 1.99e-17 77.0

Find 95 sgRNAs with CRISPR-Local

Find 613 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGATTAGTTTCACGAAAT+TGG 0.171691 5:-9015360 MsG0580024739.01.T01:CDS
AAGTCAGTGCTGACTATTTC+TGG 0.215709 5:-9015005 MsG0580024739.01.T01:CDS
ATTGTTCCTTGGAATAAATT+TGG 0.236197 5:+9024524 None:intergenic
TCTTCTTGATTTGGTCTAGA+TGG 0.272788 5:+9015183 None:intergenic
CAGCAGCACTCTTCTTGATT+TGG 0.283867 5:+9015174 None:intergenic
TTCCACAGATGAGCGTTTCT+AGG 0.313600 5:-9014818 MsG0580024739.01.T01:three_prime_UTR
AAGCTGCCTGATTATAGTTC+TGG 0.319469 5:-9015635 MsG0580024739.01.T01:CDS
TGGTCAAGCGTTGTTCCCTC+TGG 0.332777 5:-9024840 MsG0580024739.01.T01:CDS
GTAGTAGATATTCTGATATA+TGG 0.350500 5:-9014699 MsG0580024739.01.T01:three_prime_UTR
AACACACAGTTTCAACTTTG+AGG 0.351597 5:+9024560 None:intergenic
AAGAAAGGAGGACTCTCAAC+TGG 0.374633 5:-9015864 MsG0580024739.01.T01:CDS
TCGTCTTTGTGGATGGAAAA+AGG 0.380002 5:+9015669 None:intergenic
TCTGATTTGTTGAGAACCTT+CGG 0.383141 5:+9015138 None:intergenic
GGTTCTCCAACCCTTGCATT+TGG 0.392286 5:-9015434 MsG0580024739.01.T01:CDS
AATTGAAGCTATCGTCTTTG+TGG 0.392722 5:+9015658 None:intergenic
GTTTCTAGGTTCTTTCTGAT+TGG 0.394439 5:-9014804 MsG0580024739.01.T01:three_prime_UTR
GTGGCAGAAACATCAAAGAT+AGG 0.400234 5:+9015461 None:intergenic
CTGATTTGTTGAGAACCTTC+GGG 0.400674 5:+9015139 None:intergenic
ATTATTCTACCCTCCCTTCA+AGG 0.401275 5:+9014844 None:intergenic
CAGTGTAGCGACTGAGGTTA+AGG 0.410879 5:+9015493 None:intergenic
TTCCAAGGAACAATATTCCT+TGG 0.412879 5:-9024515 MsG0580024739.01.T01:CDS
GAAATAGTCAGCACTGACTT+TGG 0.413358 5:+9015008 None:intergenic
CAATAACTTGAATCAACCTA+TGG 0.418971 5:-9014770 MsG0580024739.01.T01:three_prime_UTR
AAATAGTCAGCACTGACTTT+GGG 0.425846 5:+9015009 None:intergenic
TTCCAAGGAATATTGTTCCT+TGG 0.435024 5:+9024513 None:intergenic
AGCAATGGCCAACCCAAACT+TGG 0.435980 5:+9014950 None:intergenic
CTTGCATTTGGTGCTGAGGC+AGG 0.440987 5:-9015422 MsG0580024739.01.T01:CDS
ACTTCAACTGCTTTGAAGAA+AGG 0.441282 5:-9015879 MsG0580024739.01.T01:CDS
AGGACTTACCCGGGGAATAC+CGG 0.448689 5:+9024808 None:intergenic
AACAAATCAGAACACTATTA+CGG 0.464512 5:-9015126 MsG0580024739.01.T01:CDS
GTTTCATCTTACAGCACTAC+TGG 0.464789 5:-9021152 MsG0580024739.01.T01:CDS
TCAACAATCAAGGAAAGGTT+GGG 0.467034 5:-9015055 MsG0580024739.01.T01:CDS
GCAGGCTATGATACTAAATC+TGG 0.479364 5:-9015404 MsG0580024739.01.T01:CDS
TCTTGATTTGGTCTAGATGG+TGG 0.484846 5:+9015186 None:intergenic
TTTGATGTTTCTGCCACTGT+TGG 0.487886 5:-9015455 MsG0580024739.01.T01:CDS
GTGCGTAGAGGCATGCGCAC+TGG 0.490354 5:-9024860 None:intergenic
TTTGGTGGCCCTTGAAGGGA+GGG 0.490932 5:-9014853 MsG0580024739.01.T01:three_prime_UTR
TGGCAGAAACATCAAAGATA+GGG 0.491347 5:+9015462 None:intergenic
AACCCTTGCATTTGGTGCTG+AGG 0.491987 5:-9015426 MsG0580024739.01.T01:CDS
TTCAACAATCAAGGAAAGGT+TGG 0.493974 5:-9015056 MsG0580024739.01.T01:CDS
AGGACTCTCAACTGGGGATG+TGG 0.494637 5:-9015856 MsG0580024739.01.T01:CDS
CTTTCCTATCAGTGGCGACA+AGG 0.504369 5:-9015234 MsG0580024739.01.T01:intron
AAAGCTAGGTTCAACAATCA+AGG 0.508554 5:-9015065 MsG0580024739.01.T01:CDS
CTCTCAACTGGGGATGTGGC+AGG 0.509688 5:-9015852 MsG0580024739.01.T01:CDS
CAAGAAGAGTGCTGCTGTTG+TGG 0.509776 5:-9015168 MsG0580024739.01.T01:CDS
TACAATGTAAGAAGCAAAGC+AGG 0.516555 5:+9014719 None:intergenic
ACCTTGCCAGAACTATAATC+AGG 0.517672 5:+9015629 None:intergenic
AAGGTAAAACACAATAGATA+AGG 0.519952 5:+9014654 None:intergenic
AGTAGTGCTGTAAGATGAAA+CGG 0.520738 5:+9021154 None:intergenic
TGATTTGGTCTAGATGGTGG+AGG 0.521733 5:+9015189 None:intergenic
GAATCGAACCCGGTATTCCC+CGG 0.524428 5:-9024817 MsG0580024739.01.T01:CDS
GGTCAAGCGTTGTTCCCTCT+GGG 0.525299 5:-9024839 MsG0580024739.01.T01:CDS
GAAGCTATCGTCTTTGTGGA+TGG 0.527003 5:+9015662 None:intergenic
TGAGGTTGATACCAAGGCCC+TGG 0.529736 5:-9014982 MsG0580024739.01.T01:CDS
GGACTTACCCGGGGAATACC+GGG 0.530400 5:+9024809 None:intergenic
TTATTCTACCCTCCCTTCAA+GGG 0.531937 5:+9014845 None:intergenic
CAGAACACTATTACGGTTGG+AGG 0.533154 5:-9015119 MsG0580024739.01.T01:CDS
ATTCTCTTCTCTATGTTCCA+AGG 0.540207 5:+9024498 None:intergenic
TTGGGAAGAGCTCGTGCTGT+AGG 0.540312 5:+9015027 None:intergenic
TTCCCTCTGGGAATCGAACC+CGG 0.541454 5:-9024827 MsG0580024739.01.T01:CDS
CTGCCTCAGCACCAAATGCA+AGG 0.548233 5:+9015423 None:intergenic
AGTTTACCAAATTTATTCCA+AGG 0.550241 5:-9024530 MsG0580024739.01.T01:CDS
AATCAGAACACTATTACGGT+TGG 0.550635 5:-9015122 MsG0580024739.01.T01:CDS
AGGTTAAGGTAGCATGGTCG+TGG 0.557344 5:+9015507 None:intergenic
AATCGAACCCGGTATTCCCC+GGG 0.561153 5:-9024816 MsG0580024739.01.T01:intron
TCAGCACCAAATGCAAGGGT+TGG 0.562271 5:+9015428 None:intergenic
GCAATGGCCAACCCAAACTT+GGG 0.566984 5:+9014951 None:intergenic
ACTTCAAGGTTTGAGAGCAA+TGG 0.567035 5:+9014935 None:intergenic
AGAAAGGAGGACTCTCAACT+GGG 0.567353 5:-9015863 MsG0580024739.01.T01:CDS
TTCTGGTGAGGTTGATACCA+AGG 0.578817 5:-9014988 MsG0580024739.01.T01:CDS
AAATGGGAAACGGAAGCCAT+AGG 0.584624 5:+9014754 None:intergenic
CTAGCTTTGATCTGTGTCAG+AGG 0.591430 5:+9015080 None:intergenic
ACAATAGATAAGGATCCTCT+CGG 0.592510 5:+9014664 None:intergenic
AGTGCTGACTATTTCTGGTG+AGG 0.600743 5:-9015000 MsG0580024739.01.T01:CDS
AACCTAGAAACGCTCATCTG+TGG 0.604343 5:+9014816 None:intergenic
CAACAATCAAGGAAAGGTTG+GGG 0.608378 5:-9015054 MsG0580024739.01.T01:CDS
TGCCTCAGCACCAAATGCAA+GGG 0.611427 5:+9015424 None:intergenic
TAGGTTCAACAATCAAGGAA+AGG 0.612340 5:-9015060 MsG0580024739.01.T01:CDS
TCAACTGCTTTGAAGAAAGG+AGG 0.613940 5:-9015876 MsG0580024739.01.T01:CDS
CGACTGAGGTTAAGGTAGCA+TGG 0.618567 5:+9015501 None:intergenic
TTGCTTCAGTGTAGCGACTG+AGG 0.620374 5:+9015487 None:intergenic
GCCTGATTATAGTTCTGGCA+AGG 0.623753 5:-9015630 MsG0580024739.01.T01:intron
GGCAGAAACATCAAAGATAG+GGG 0.624754 5:+9015463 None:intergenic
TTTCCTATCAGTGGCGACAA+GGG 0.625564 5:-9015233 MsG0580024739.01.T01:intron
CTCTGACACAGATCAAAGCT+AGG 0.632557 5:-9015079 MsG0580024739.01.T01:CDS
TAGCTTTGATCTGTGTCAGA+GGG 0.634327 5:+9015081 None:intergenic
TGAAACGGTAAGCTTCTGAT+CGG 0.639844 5:+9021169 None:intergenic
CTGTTGTGGATATTACCCGA+AGG 0.654620 5:-9015154 MsG0580024739.01.T01:CDS
AGAACACTATTACGGTTGGA+GGG 0.671397 5:-9015118 MsG0580024739.01.T01:CDS
TACCGGGTTCGATTCCCAGA+GGG 0.674669 5:+9024825 None:intergenic
AACAATCAAGGAAAGGTTGG+GGG 0.680087 5:-9015053 MsG0580024739.01.T01:CDS
TGGAAGTCTTGTTCTCCGAG+AGG 0.705406 5:-9014679 MsG0580024739.01.T01:three_prime_UTR
GAAAGGAGGACTCTCAACTG+GGG 0.714176 5:-9015862 MsG0580024739.01.T01:CDS
AAGGGTTGGAGAACCAACAG+TGG 0.718653 5:+9015442 None:intergenic
ATACCGGGTTCGATTCCCAG+AGG 0.746280 5:+9024824 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTATCAGAATAAT+TGG + Chr5:9018279-9018298 None:intergenic 10.0%
!! AACTATCAAAATATATATTA+AGG - Chr5:9018983-9019002 MsG0580024739.01.T01:intron 10.0%
!! AATGAAAAATTAGAAAATTT+GGG - Chr5:9019562-9019581 MsG0580024739.01.T01:intron 10.0%
!! ATACATTAAAATAAAAAGAT+AGG + Chr5:9021064-9021083 None:intergenic 10.0%
!! ATATTTAGAAAAAATATGTT+TGG + Chr5:9015832-9015851 None:intergenic 10.0%
!! ATGTAGAATATAATTTAAAA+AGG - Chr5:9022240-9022259 MsG0580024739.01.T01:intron 10.0%
!! TAATAATAAAAAGTAAGAAA+GGG + Chr5:9023018-9023037 None:intergenic 10.0%
!! TGTAGAATATAATTTAAAAA+GGG - Chr5:9022241-9022260 MsG0580024739.01.T01:intron 10.0%
!! TTAAAAATTGGAATTATATT+AGG + Chr5:9015783-9015802 None:intergenic 10.0%
!! TTAATAATAAAAAGTAAGAA+AGG + Chr5:9023019-9023038 None:intergenic 10.0%
!! TTATTAATTATAAATTGTAG+TGG + Chr5:9018399-9018418 None:intergenic 10.0%
!! TTTATTAGTATTAATTAAAG+GGG - Chr5:9019786-9019805 MsG0580024739.01.T01:intron 10.0%
!!! AAAAAAATCTAATTATCTTT+TGG - Chr5:9017789-9017808 MsG0580024739.01.T01:intron 10.0%
!!! AAAGTGTTATAATAAAATAA+AGG + Chr5:9021970-9021989 None:intergenic 10.0%
!!! AAGATAATTAGATTTTTTTT+AGG + Chr5:9017788-9017807 None:intergenic 10.0%
!!! AATTTTCAAAAAAGAATTAA+TGG + Chr5:9020931-9020950 None:intergenic 10.0%
!!! ACAGTTTTATTTTTTTAATA+CGG - Chr5:9023364-9023383 MsG0580024739.01.T01:intron 10.0%
!!! ACTTTTTTTTAAAAGAAAAT+AGG - Chr5:9019983-9020002 MsG0580024739.01.T01:intron 10.0%
!!! AGATAATTAGATTTTTTTTA+GGG + Chr5:9017787-9017806 None:intergenic 10.0%
!!! AGTTTAGTAAATTTTATTTT+CGG - Chr5:9015659-9015678 MsG0580024739.01.T01:CDS 10.0%
!!! ATTTTCAAAAAAGAATTAAT+GGG + Chr5:9020930-9020949 None:intergenic 10.0%
!!! ATTTTTAACTATCTTTTTTA+AGG - Chr5:9018896-9018915 MsG0580024739.01.T01:intron 10.0%
!!! GTTTTAATATAATTTTGTTT+TGG + Chr5:9018842-9018861 None:intergenic 10.0%
!!! TAATATAATTCCAATTTTTA+AGG - Chr5:9015782-9015801 MsG0580024739.01.T01:intron 10.0%
!!! TACAAGATTTTTTTTTTTAA+CGG + Chr5:9020292-9020311 None:intergenic 10.0%
!!! TTATATTTTACTTACTTTAT+AGG - Chr5:9016715-9016734 MsG0580024739.01.T01:intron 10.0%
!!! TTCTTTAAAATATAAAACTA+AGG - Chr5:9015351-9015370 MsG0580024739.01.T01:CDS 10.0%
!!! TTTCCATTTATTTTTATAAA+TGG - Chr5:9014877-9014896 MsG0580024739.01.T01:three_prime_UTR 10.0%
!! AGAGAAAAAATAATAAAAGA+GGG + Chr5:9021549-9021568 None:intergenic 15.0%
!! ATAGAATTAAAAGGATAATT+TGG - Chr5:9020051-9020070 MsG0580024739.01.T01:intron 15.0%
!! ATTAAATATAAGAGTTATTG+AGG - Chr5:9019059-9019078 MsG0580024739.01.T01:intron 15.0%
!! CAAAAATATCTAAGTTTATA+TGG + Chr5:9015407-9015426 None:intergenic 15.0%
!! GAATGAAAAATTAGAAAATT+TGG - Chr5:9019561-9019580 MsG0580024739.01.T01:intron 15.0%
!! GTAGAATATAATTTAAAAAG+GGG - Chr5:9022242-9022261 MsG0580024739.01.T01:intron 15.0%
!! TAGAATATAATTTAAAAAGG+GGG - Chr5:9022243-9022262 MsG0580024739.01.T01:intron 15.0%
!! TCTCCATTTATAAAAATAAA+TGG + Chr5:9014883-9014902 None:intergenic 15.0%
!!! AATGAATGTTTTTTTTATGA+AGG - Chr5:9015882-9015901 MsG0580024739.01.T01:CDS 15.0%
!!! ACAATAACTCTTTTTATATA+GGG + Chr5:9020769-9020788 None:intergenic 15.0%
!!! AGAAAAAATTTTCAAAGAAA+AGG - Chr5:9015702-9015721 MsG0580024739.01.T01:intron 15.0%
!!! AGCTTTATAAATTAATTATC+TGG - Chr5:9022451-9022470 MsG0580024739.01.T01:intron 15.0%
!!! AGTTTTATTTTTTTAATACG+GGG - Chr5:9023366-9023385 MsG0580024739.01.T01:intron 15.0%
!!! ATTTACATTTTATTACTTAC+AGG + Chr5:9021721-9021740 None:intergenic 15.0%
!!! ATTTTTGAAGAATTTTGTTT+TGG - Chr5:9016805-9016824 MsG0580024739.01.T01:intron 15.0%
!!! CAGTTTTATTTTTTTAATAC+GGG - Chr5:9023365-9023384 MsG0580024739.01.T01:intron 15.0%
!!! CATATAAACTTAGATATTTT+TGG - Chr5:9015405-9015424 MsG0580024739.01.T01:CDS 15.0%
!!! GAAAAAATTTTCAAAGAAAA+GGG - Chr5:9015703-9015722 MsG0580024739.01.T01:intron 15.0%
!!! GATAATTAGATTTTTTTTAG+GGG + Chr5:9017786-9017805 None:intergenic 15.0%
!!! GTTTATGTGTTTTTTTTTTA+TGG + Chr5:9015324-9015343 None:intergenic 15.0%
!!! TAATATAATTTTGTTTTGGT+GGG + Chr5:9018838-9018857 None:intergenic 15.0%
!!! TACATTTTCATAATTCATTT+TGG - Chr5:9023059-9023078 MsG0580024739.01.T01:intron 15.0%
!!! TATTTTATTTAAAGAGATGA+AGG - Chr5:9014764-9014783 MsG0580024739.01.T01:three_prime_UTR 15.0%
!!! TATTTTGAATTCATAAATGT+TGG - Chr5:9022767-9022786 MsG0580024739.01.T01:intron 15.0%
!!! TTAATATAATTTTGTTTTGG+TGG + Chr5:9018839-9018858 None:intergenic 15.0%
!!! TTTACATTTTATTACTTACA+GGG + Chr5:9021720-9021739 None:intergenic 15.0%
!!! TTTTCAAAAAAGAATTAATG+GGG + Chr5:9020929-9020948 None:intergenic 15.0%
!!! TTTTCAAAAACCTTAAAAAT+TGG + Chr5:9015795-9015814 None:intergenic 15.0%
!!! TTTTTGAAGAATTTTGTTTT+GGG - Chr5:9016806-9016825 MsG0580024739.01.T01:intron 15.0%
!! AAAAAAAAAATTAGAGCTTG+AGG + Chr5:9019413-9019432 None:intergenic 20.0%
!! AAAAAAAAATTAGAGCTTGA+GGG + Chr5:9019332-9019351 None:intergenic 20.0%
!! AAAAATAAAGGAAAACTTCA+AGG + Chr5:9024586-9024605 None:intergenic 20.0%
!! AAACATAATTAGTATTACAG+AGG - Chr5:9019592-9019611 MsG0580024739.01.T01:intron 20.0%
!! AAACTTCAATATTTATTCTC+TGG - Chr5:9019353-9019372 MsG0580024739.01.T01:intron 20.0%
!! AAATCATTTAAGTCTATGTT+TGG - Chr5:9019094-9019113 MsG0580024739.01.T01:intron 20.0%
!! AATACCTACAAAGAATAATT+TGG - Chr5:9017283-9017302 MsG0580024739.01.T01:intron 20.0%
!! AATAGTAAAAGCTCATTTAT+TGG + Chr5:9020438-9020457 None:intergenic 20.0%
!! AGAATATAATTTAAAAAGGG+GGG - Chr5:9022244-9022263 MsG0580024739.01.T01:intron 20.0%
!! ATAAAAAGAGGGATTATAAT+AGG - Chr5:9015089-9015108 MsG0580024739.01.T01:CDS 20.0%
!! ATAAAATGTAAATGCAATGT+AGG - Chr5:9021728-9021747 MsG0580024739.01.T01:intron 20.0%
!! ATCTAATGTTCATTTCAATA+TGG - Chr5:9023582-9023601 MsG0580024739.01.T01:intron 20.0%
!! ATGCTTATTACCTAAAATTT+GGG - Chr5:9022900-9022919 MsG0580024739.01.T01:intron 20.0%
!! ATTTAATCAAAAATGGGAAA+CGG + Chr5:9024763-9024782 None:intergenic 20.0%
!! CAGGAAATTTAATCAAAAAT+GGG + Chr5:9024769-9024788 None:intergenic 20.0%
!! CTTATGTTCAATTAATTCTT+GGG - Chr5:9018579-9018598 MsG0580024739.01.T01:intron 20.0%
!! GAGAGAAAAAATAATAAAAG+AGG + Chr5:9021550-9021569 None:intergenic 20.0%
!! GTTTAACATTATAATATTCC+CGG - Chr5:9015061-9015080 MsG0580024739.01.T01:CDS 20.0%
!! TAAAAATCAACAAATTGAGT+TGG + Chr5:9017662-9017681 None:intergenic 20.0%
!! TAAACAAAATAGCAATATCT+TGG - Chr5:9021995-9022014 MsG0580024739.01.T01:intron 20.0%
!! TAACGATAAACAAATTTCTT+CGG - Chr5:9017581-9017600 MsG0580024739.01.T01:intron 20.0%
!! TAAGAAAAATCACAAATCAA+TGG - Chr5:9022499-9022518 MsG0580024739.01.T01:intron 20.0%
!! TTATGTTCAATTAATTCTTG+GGG - Chr5:9018580-9018599 MsG0580024739.01.T01:intron 20.0%
!! TTTAACATTATAATATTCCC+GGG - Chr5:9015062-9015081 MsG0580024739.01.T01:CDS 20.0%
!! TTTGTATAACAACTTATCTA+CGG + Chr5:9017078-9017097 None:intergenic 20.0%
!!! AAACTTAGATATTTTTGGAT+TGG - Chr5:9015410-9015429 MsG0580024739.01.T01:CDS 20.0%
!!! AACGAAATATTTTGATATCA+AGG + Chr5:9018714-9018733 None:intergenic 20.0%
!!! AAGTTTGCTAATTTTTATTC+CGG + Chr5:9015210-9015229 None:intergenic 20.0%
!!! ACTTATTGGCTAAAAAATTA+GGG - Chr5:9023111-9023130 MsG0580024739.01.T01:intron 20.0%
!!! ATATTCGTTTTGAAAATCAA+CGG - Chr5:9017942-9017961 MsG0580024739.01.T01:intron 20.0%
!!! ATCACACGTTTTAAAAATAA+AGG + Chr5:9024598-9024617 None:intergenic 20.0%
!!! ATCTATTGACATAAATTTTG+TGG - Chr5:9016856-9016875 MsG0580024739.01.T01:intron 20.0%
!!! ATGATCAATTGATTTATCTA+AGG - Chr5:9022738-9022757 MsG0580024739.01.T01:intron 20.0%
!!! CACAATAACTCTTTTTATAT+AGG + Chr5:9020770-9020789 None:intergenic 20.0%
!!! GAAACATATGTTTTTTTAGA+AGG - Chr5:9015504-9015523 MsG0580024739.01.T01:CDS 20.0%
!!! TACTTATTGGCTAAAAAATT+AGG - Chr5:9023110-9023129 MsG0580024739.01.T01:intron 20.0%
!!! TACTTTTGTGAATTTAGTTT+TGG - Chr5:9021834-9021853 MsG0580024739.01.T01:intron 20.0%
!!! TATTATAATCCCTCTTTTTA+TGG + Chr5:9015090-9015109 None:intergenic 20.0%
!!! TCTATTGACATAAATTTTGT+GGG - Chr5:9016857-9016876 MsG0580024739.01.T01:intron 20.0%
!!! TCTTTTTTGAAAATTTTGAC+CGG - Chr5:9020936-9020955 MsG0580024739.01.T01:intron 20.0%
!!! TGATCAATTGATTTATCTAA+GGG - Chr5:9022739-9022758 MsG0580024739.01.T01:intron 20.0%
!!! TTAGAATTTTGATACATTGA+AGG - Chr5:9020856-9020875 MsG0580024739.01.T01:intron 20.0%
!!! TTGAAATTTTGATACATTGA+GGG + Chr5:9018653-9018672 None:intergenic 20.0%
!!! TTTGAAATTTTGATACATTG+AGG + Chr5:9018654-9018673 None:intergenic 20.0%
! AAAAAGTAAGAAAGGGATAA+AGG + Chr5:9023011-9023030 None:intergenic 25.0%
! AAAAGAAACTGAATGTTTAG+AGG - Chr5:9022069-9022088 MsG0580024739.01.T01:intron 25.0%
! AAACGATTTATGAGCATAAA+TGG + Chr5:9022360-9022379 None:intergenic 25.0%
! AACAAAGAACTAGATGTTAA+AGG + Chr5:9017412-9017431 None:intergenic 25.0%
! AACAAATCAGAACACTATTA+CGG - Chr5:9024378-9024397 MsG0580024739.01.T01:intron 25.0%
! AACAATCAAAAATCTTTCCT+TGG - Chr5:9017367-9017386 MsG0580024739.01.T01:intron 25.0%
! AACCATTAATAGATAGATCA+AGG - Chr5:9016670-9016689 MsG0580024739.01.T01:intron 25.0%
! AACGATAAACAAATTTCTTC+GGG - Chr5:9017582-9017601 MsG0580024739.01.T01:intron 25.0%
! AACTAAGGATGTTTATGAAT+TGG - Chr5:9015366-9015385 MsG0580024739.01.T01:CDS 25.0%
! AAGAGTTATTGTGAGTATTA+AGG - Chr5:9020777-9020796 MsG0580024739.01.T01:intron 25.0%
! AATACTATATGAACAATGTC+TGG - Chr5:9022039-9022058 MsG0580024739.01.T01:intron 25.0%
! ACAATAAGTAAGTACGTATA+AGG + Chr5:9020737-9020756 None:intergenic 25.0%
! AGAAATTCCAAAAGGAATTA+TGG + Chr5:9022860-9022879 None:intergenic 25.0%
! AGAGTTATTGTGAGTATTAA+GGG - Chr5:9020778-9020797 MsG0580024739.01.T01:intron 25.0%
! AGTTATATTCGTAGATTTCT+TGG + Chr5:9015271-9015290 None:intergenic 25.0%
! AGTTTACCAAATTTATTCCA+AGG - Chr5:9014974-9014993 MsG0580024739.01.T01:CDS 25.0%
! ATAATCATCAATAACGTACA+AGG - Chr5:9023276-9023295 MsG0580024739.01.T01:intron 25.0%
! ATACTATATGAACAATGTCT+GGG - Chr5:9022040-9022059 MsG0580024739.01.T01:intron 25.0%
! ATTGTTCCTTGGAATAAATT+TGG + Chr5:9014983-9015002 None:intergenic 25.0%
! CATGCTTATTACCTAAAATT+TGG - Chr5:9022899-9022918 MsG0580024739.01.T01:intron 25.0%
! CGTTAATATTGTCATATTCA+TGG - Chr5:9018730-9018749 MsG0580024739.01.T01:intron 25.0%
! GAAAAAAAAATTAGAGCTTG+AGG + Chr5:9019333-9019352 None:intergenic 25.0%
! GAAATTATTCTCATCTTCAT+GGG - Chr5:9015123-9015142 MsG0580024739.01.T01:CDS 25.0%
! GAGTATTAAGGGATTATTTA+AGG - Chr5:9020789-9020808 MsG0580024739.01.T01:intron 25.0%
! GCAGGAAATTTAATCAAAAA+TGG + Chr5:9024770-9024789 None:intergenic 25.0%
! GCTTATGTTCAATTAATTCT+TGG - Chr5:9018578-9018597 MsG0580024739.01.T01:intron 25.0%
! GTAGTAGATATTCTGATATA+TGG - Chr5:9024805-9024824 MsG0580024739.01.T01:intron 25.0%
! TAGATTAATAAATCCCTTTG+AGG + Chr5:9017751-9017770 None:intergenic 25.0%
! TGAAATTATTCTCATCTTCA+TGG - Chr5:9015122-9015141 MsG0580024739.01.T01:CDS 25.0%
! TGCTTATTACCTAAAATTTG+GGG - Chr5:9022901-9022920 MsG0580024739.01.T01:intron 25.0%
! TTATGTACAGACTAAAATAC+TGG + Chr5:9021629-9021648 None:intergenic 25.0%
!! AGTCAGACTTGAAATAATTT+TGG + Chr5:9016045-9016064 None:intergenic 25.0%
!! AGTTTTACTAAATACAACAC+TGG - Chr5:9024124-9024143 MsG0580024739.01.T01:intron 25.0%
!! CTGATTCATATTTTATTACG+TGG - Chr5:9021652-9021671 MsG0580024739.01.T01:intron 25.0%
!! GTGATTTTTCATCTTTTGTA+TGG - Chr5:9023900-9023919 MsG0580024739.01.T01:intron 25.0%
!! GTTCTTTTTAAATTCATGTC+TGG - Chr5:9023449-9023468 MsG0580024739.01.T01:intron 25.0%
!! GTTTTACTAAATACAACACT+GGG - Chr5:9024125-9024144 MsG0580024739.01.T01:intron 25.0%
!! TACATTTCCATAATTCCTTT+TGG - Chr5:9022850-9022869 MsG0580024739.01.T01:intron 25.0%
!! TCAAGTATTTTATACGTTCT+TGG + Chr5:9016253-9016272 None:intergenic 25.0%
!! TTAACATTTTCAATCACGTT+AGG - Chr5:9017879-9017898 MsG0580024739.01.T01:intron 25.0%
!! TTCATAAAGGAAATTTGTTC+AGG - Chr5:9017503-9017522 MsG0580024739.01.T01:intron 25.0%
!! TTCTGTATAAACTTGTTTCA+CGG - Chr5:9021806-9021825 MsG0580024739.01.T01:intron 25.0%
!! TTGTACGTTATTGATGATTA+TGG + Chr5:9023277-9023296 None:intergenic 25.0%
!!! AATTTTGTTTTGGGTATGTT+TGG - Chr5:9016815-9016834 MsG0580024739.01.T01:intron 25.0%
!!! ACTAGCAACGTTTTTTTTTA+AGG + Chr5:9016454-9016473 None:intergenic 25.0%
!!! ACTGTTTACGATGTTTTTAA+AGG + Chr5:9021039-9021058 None:intergenic 25.0%
!!! AGTTTGCTAATTTTTATTCC+GGG + Chr5:9015209-9015228 None:intergenic 25.0%
!!! ATTTTGGTTAAAAGTGAGTT+TGG + Chr5:9020179-9020198 None:intergenic 25.0%
!!! CTCAATTTTGACATCAATAA+GGG + Chr5:9023698-9023717 None:intergenic 25.0%
!!! GACTTGAAATAATTTTGGAA+TGG + Chr5:9016040-9016059 None:intergenic 25.0%
!!! GAGAAGAGAATTTTATTTCA+AGG - Chr5:9015018-9015037 MsG0580024739.01.T01:CDS 25.0%
!!! TCTCAATTTTGACATCAATA+AGG + Chr5:9023699-9023718 None:intergenic 25.0%
!!! TCTTCTTGTTTTTCTATAAC+TGG - Chr5:9019383-9019402 MsG0580024739.01.T01:intron 25.0%
!!! TGTTTTAGATCTTTTGACAA+AGG - Chr5:9018303-9018322 MsG0580024739.01.T01:intron 25.0%
!!! TTACGATGTTTTTAAAGGAA+CGG + Chr5:9021034-9021053 None:intergenic 25.0%
!!! TTATTTTTTTAATACGGGGA+TGG - Chr5:9023370-9023389 MsG0580024739.01.T01:intron 25.0%
!!! TTCCTCTTTCTCTTTAATTT+TGG - Chr5:9016479-9016498 MsG0580024739.01.T01:intron 25.0%
!!! TTTAACATCTAGTTCTTTGT+TGG - Chr5:9017411-9017430 MsG0580024739.01.T01:intron 25.0%
!!! TTTTCATGTCTGAAATACTT+GGG - Chr5:9022315-9022334 MsG0580024739.01.T01:intron 25.0%
AAAAAAAACGTTGCTAGTAG+TGG - Chr5:9016456-9016475 MsG0580024739.01.T01:intron 30.0%
AAGAATAACAAGCAATTAGC+TGG - Chr5:9020342-9020361 MsG0580024739.01.T01:intron 30.0%
AATAAAAAAACCGAGTTGCT+TGG + Chr5:9014748-9014767 None:intergenic 30.0%
AATAAACATCAGCCTTAAGA+AGG + Chr5:9021681-9021700 None:intergenic 30.0%
ACGATAAACAAATTTCTTCG+GGG - Chr5:9017583-9017602 MsG0580024739.01.T01:intron 30.0%
ACTAACAAAATGCACAATCA+GGG + Chr5:9018682-9018701 None:intergenic 30.0%
ACTAACAAAGTAGACAATCA+GGG - Chr5:9020827-9020846 MsG0580024739.01.T01:intron 30.0%
AGATGAAAATAACAGAGAAG+TGG + Chr5:9016145-9016164 None:intergenic 30.0%
AGCAAACTTGTAACAAACAT+AGG - Chr5:9015221-9015240 MsG0580024739.01.T01:CDS 30.0%
AGTCTTCTTGCAATAACTTA+GGG - Chr5:9016768-9016787 MsG0580024739.01.T01:intron 30.0%
ATAAAAAAACCGAGTTGCTT+GGG + Chr5:9014747-9014766 None:intergenic 30.0%
ATCGAAAAATCGTAAATCGT+AGG - Chr5:9018790-9018809 MsG0580024739.01.T01:intron 30.0%
ATCTCCATGGAATTGAATAA+TGG - Chr5:9019689-9019708 MsG0580024739.01.T01:intron 30.0%
ATGTAAGGAGAAATTCCAAA+AGG + Chr5:9022868-9022887 None:intergenic 30.0%
ATTCTGTATAAGTGCGATAA+TGG + Chr5:9021943-9021962 None:intergenic 30.0%
CAAATACTAAGAATGTGCTA+TGG - Chr5:9023505-9023524 MsG0580024739.01.T01:intron 30.0%
CAACTTGGATGGATAAAATT+TGG + Chr5:9021423-9021442 None:intergenic 30.0%
CAAGTTTATAGCCAAAACAT+GGG - Chr5:9019216-9019235 MsG0580024739.01.T01:intron 30.0%
CAATAACTTGAATCAACCTA+TGG - Chr5:9024734-9024753 MsG0580024739.01.T01:intron 30.0%
CACCAAAATTAAAGAGAAAG+AGG + Chr5:9016484-9016503 None:intergenic 30.0%
CATAGCACATTCTTAGTATT+TGG + Chr5:9023507-9023526 None:intergenic 30.0%
CCAACGACATAGATAAAATT+TGG + Chr5:9016743-9016762 None:intergenic 30.0%
CCTCACTCTTAATTATCTAT+GGG - Chr5:9014907-9014926 MsG0580024739.01.T01:three_prime_UTR 30.0%
CGAACCAAATTATTCTTTGT+AGG + Chr5:9017290-9017309 None:intergenic 30.0%
CGTAGATTTCTTGGAATAAA+AGG + Chr5:9015262-9015281 None:intergenic 30.0%
CTTAAGTAAATCATCTCATG+TGG - Chr5:9023771-9023790 MsG0580024739.01.T01:intron 30.0%
GAGATTTGTAACAGAAATCT+TGG + Chr5:9024209-9024228 None:intergenic 30.0%
GCTTATGTATAAGCTAACAA+AGG + Chr5:9017025-9017044 None:intergenic 30.0%
GGAATTATGGAAATGTACAA+TGG + Chr5:9022847-9022866 None:intergenic 30.0%
GTCCTTGATCTATCTATTAA+TGG + Chr5:9016675-9016694 None:intergenic 30.0%
TAACTGGTGAAAAACAAAAG+TGG - Chr5:9019483-9019502 MsG0580024739.01.T01:intron 30.0%
TAATTAGTATTACAGAGGAG+AGG - Chr5:9019597-9019616 MsG0580024739.01.T01:intron 30.0%
TAATTGCATTATCAGATGTC+AGG - Chr5:9018447-9018466 MsG0580024739.01.T01:intron 30.0%
TAGTCTTCTTGCAATAACTT+AGG - Chr5:9016767-9016786 MsG0580024739.01.T01:intron 30.0%
TATGAAGCTTAGATATAGAC+AGG + Chr5:9020984-9021003 None:intergenic 30.0%
TCCTCACTCTTAATTATCTA+TGG - Chr5:9014906-9014925 MsG0580024739.01.T01:three_prime_UTR 30.0%
TGAAACAGAATTAATCTCCA+TGG - Chr5:9019676-9019695 MsG0580024739.01.T01:intron 30.0%
TTATGGTAGAACTTCAATGT+TGG + Chr5:9015307-9015326 None:intergenic 30.0%
TTTCTGTTACAAATCTCTAG+CGG - Chr5:9024212-9024231 MsG0580024739.01.T01:intron 30.0%
! AAAAGTTTCTGAAGACAATG+TGG + Chr5:9018033-9018052 None:intergenic 30.0%
! ACAAGTTTATACAGAAGCAT+TGG + Chr5:9021802-9021821 None:intergenic 30.0%
! ATGACTTTTAGCAAGCAATA+TGG - Chr5:9020372-9020391 MsG0580024739.01.T01:intron 30.0%
! CCAAATTTTATCTATGTCGT+TGG - Chr5:9016740-9016759 MsG0580024739.01.T01:intron 30.0%
! CTTATCTATTGTGTTTTACC+TGG - Chr5:9024851-9024870 MsG0580024739.01.T01:CDS 30.0%
! TAATCACACATCAGAAGTAT+CGG + Chr5:9018551-9018570 None:intergenic 30.0%
! TAATGGGGTAATAGTCATTT+TGG + Chr5:9020914-9020933 None:intergenic 30.0%
! TGTTTTGTCTATAGACAAAG+CGG + Chr5:9021489-9021508 None:intergenic 30.0%
!! ATTAATTTGTTAGCCGTTGT+CGG - Chr5:9018515-9018534 MsG0580024739.01.T01:intron 30.0%
!! CAGTTTGAGAGAATTGATTT+TGG + Chr5:9020195-9020214 None:intergenic 30.0%
!! GAATGATCAACGAGTTTTAA+CGG + Chr5:9017251-9017270 None:intergenic 30.0%
!! GTTTTCATGTCTGAAATACT+TGG - Chr5:9022314-9022333 MsG0580024739.01.T01:intron 30.0%
!! TTATACAGAAGCATTGGATT+TGG + Chr5:9021796-9021815 None:intergenic 30.0%
!! TTTTTAGTGTGTGTTTGGTA+TGG + Chr5:9020247-9020266 None:intergenic 30.0%
!!! AAAGCTGCTATTTTCAAAGT+CGG + Chr5:9016336-9016355 None:intergenic 30.0%
!!! TCTCTTTTTTAGTGTGTGTT+TGG + Chr5:9020252-9020271 None:intergenic 30.0%
AAAAAGGTCAGTGAATGTGA+GGG + Chr5:9023822-9023841 None:intergenic 35.0%
AAACAAACTAACACACGACA+TGG + Chr5:9021357-9021376 None:intergenic 35.0%
AAAGCTAGGTTCAACAATCA+AGG - Chr5:9024439-9024458 MsG0580024739.01.T01:intron 35.0%
AAATCTCTACCAACATCTCT+TGG - Chr5:9016593-9016612 MsG0580024739.01.T01:intron 35.0%
AAATTTCTTCCCACGGAAAA+GGG + Chr5:9015162-9015181 None:intergenic 35.0%
AACACAAACACCTCCTTTAT+AGG + Chr5:9015575-9015594 None:intergenic 35.0%
AACACACAGTTTCAACTTTG+AGG + Chr5:9014947-9014966 None:intergenic 35.0%
AACATGTTCTTTCCTATCAG+TGG - Chr5:9024262-9024281 MsG0580024739.01.T01:intron 35.0%
AAGAAAATCCCCAATTTCCA+TGG - Chr5:9019519-9019538 MsG0580024739.01.T01:intron 35.0%
AAGCACAACATAGAACCTAA+TGG + Chr5:9017326-9017345 None:intergenic 35.0%
AATCAGAACACTATTACGGT+TGG - Chr5:9024382-9024401 MsG0580024739.01.T01:intron 35.0%
AATTGAAGCTATCGTCTTTG+TGG + Chr5:9023849-9023868 None:intergenic 35.0%
ACAATAGATAAGGATCCTCT+CGG + Chr5:9024843-9024862 None:intergenic 35.0%
ACTGAATGTTTAGAGGCAAT+TGG - Chr5:9022076-9022095 MsG0580024739.01.T01:intron 35.0%
AGACATATCTTATGCCTCAA+AGG - Chr5:9017734-9017753 MsG0580024739.01.T01:intron 35.0%
AGATCTTACCTAAGATCGTT+TGG - Chr5:9018765-9018784 MsG0580024739.01.T01:intron 35.0%
AGGTTTAAACTTCCAAACGT+GGG - Chr5:9019142-9019161 MsG0580024739.01.T01:intron 35.0%
AGTAGTGCTGTAAGATGAAA+CGG + Chr5:9018353-9018372 None:intergenic 35.0%
ATTAGAGCTTGAGGGTAATT+AGG + Chr5:9019324-9019343 None:intergenic 35.0%
ATTATCAGATGTCAGGTTAC+TGG - Chr5:9018454-9018473 MsG0580024739.01.T01:intron 35.0%
ATTCTCTTCTCTATGTTCCA+AGG + Chr5:9015009-9015028 None:intergenic 35.0%
ATTGTACTTCCTGGTTATCA+TGG - Chr5:9023474-9023493 MsG0580024739.01.T01:intron 35.0%
CAAAATGGAAAGAAGACTAG+CGG + Chr5:9017105-9017124 None:intergenic 35.0%
CAATATGGTTTCTTCCTTTC+AGG - Chr5:9023597-9023616 MsG0580024739.01.T01:intron 35.0%
CAATGGCAACACTAATCATT+TGG + Chr5:9022830-9022849 None:intergenic 35.0%
CAATTGGATTGAATGTAGAC+AGG - Chr5:9022092-9022111 MsG0580024739.01.T01:intron 35.0%
CCATCATGTGTTTCCTATAA+AGG - Chr5:9015559-9015578 MsG0580024739.01.T01:intron 35.0%
CCCATAGATAATTAAGAGTG+AGG + Chr5:9014910-9014929 None:intergenic 35.0%
CCTTTATAGGAAACACATGA+TGG + Chr5:9015562-9015581 None:intergenic 35.0%
CGGGTATAAAACATGTTCAT+GGG + Chr5:9015190-9015209 None:intergenic 35.0%
CTAAAATCGAAGATGAGCAA+GGG - Chr5:9018174-9018193 MsG0580024739.01.T01:intron 35.0%
CTCTCCATTATTCAATTCCA+TGG + Chr5:9019696-9019715 None:intergenic 35.0%
CTGAAGAACTAATATGACCA+AGG + Chr5:9020689-9020708 None:intergenic 35.0%
GACATATCTTATGCCTCAAA+GGG - Chr5:9017735-9017754 MsG0580024739.01.T01:intron 35.0%
GACTAACAAAATGCACAATC+AGG + Chr5:9018683-9018702 None:intergenic 35.0%
GACTAACAAAGTAGACAATC+AGG - Chr5:9020826-9020845 MsG0580024739.01.T01:intron 35.0%
GATATTCAGCCTAACAATGT+CGG + Chr5:9021301-9021320 None:intergenic 35.0%
GCAAGTTTATAGCCAAAACA+TGG - Chr5:9019215-9019234 MsG0580024739.01.T01:intron 35.0%
GCAATGGTAAAACCACAAAA+TGG + Chr5:9017120-9017139 None:intergenic 35.0%
GGAAGTTTAAACCTGTGTTT+GGG + Chr5:9019136-9019155 None:intergenic 35.0%
GGAATAGAAATTTCTTCCCA+CGG + Chr5:9015169-9015188 None:intergenic 35.0%
GTCTTCTTGCAATAACTTAG+GGG - Chr5:9016769-9016788 MsG0580024739.01.T01:intron 35.0%
GTTGCATACTGCATACTTAT+TGG - Chr5:9023097-9023116 MsG0580024739.01.T01:intron 35.0%
TAATTTCCAGACACAAAGCT+TGG + Chr5:9023426-9023445 None:intergenic 35.0%
TACAATGTAAGAAGCAAAGC+AGG + Chr5:9024788-9024807 None:intergenic 35.0%
TACCTAAAATTTGGGGATAG+TGG - Chr5:9022908-9022927 MsG0580024739.01.T01:intron 35.0%
TACTATTCGTTCCTCATTCA+GGG + Chr5:9018622-9018641 None:intergenic 35.0%
TAGGTTCAACAATCAAGGAA+AGG - Chr5:9024444-9024463 MsG0580024739.01.T01:intron 35.0%
TATTGAGTGGCCTATACAAA+AGG + Chr5:9022796-9022815 None:intergenic 35.0%
TATTGGAGTCAAAACCTAGA+AGG + Chr5:9015537-9015556 None:intergenic 35.0%
TCAAAACGAATATGATGCGT+GGG + Chr5:9017935-9017954 None:intergenic 35.0%
TCAACAATCAAGGAAAGGTT+GGG - Chr5:9024449-9024468 MsG0580024739.01.T01:intron 35.0%
TCATGTGTTTCCTATAAAGG+AGG - Chr5:9015562-9015581 MsG0580024739.01.T01:intron 35.0%
TCTTCTTGCAATAACTTAGG+GGG - Chr5:9016770-9016789 MsG0580024739.01.T01:intron 35.0%
TGAGACTCTATTCTTGATGA+TGG - Chr5:9017621-9017640 MsG0580024739.01.T01:intron 35.0%
TGGAAGTTTAAACCTGTGTT+TGG + Chr5:9019137-9019156 None:intergenic 35.0%
TGGAGAAAAAACCCAAGTTT+GGG - Chr5:9024542-9024561 MsG0580024739.01.T01:CDS 35.0%
TGGCAGAAACATCAAAGATA+GGG + Chr5:9024045-9024064 None:intergenic 35.0%
TGTCCAAACATCATGGAAAA+TGG + Chr5:9019172-9019191 None:intergenic 35.0%
TTAATTGTGTTGTCTCGCAA+TGG + Chr5:9017136-9017155 None:intergenic 35.0%
TTACTATTCGTTCCTCATTC+AGG + Chr5:9018623-9018642 None:intergenic 35.0%
TTAGAGCTTGAGGGTAATTA+GGG + Chr5:9019323-9019342 None:intergenic 35.0%
TTAGGTTCTATGTTGTGCTT+CGG - Chr5:9017326-9017345 MsG0580024739.01.T01:intron 35.0%
TTCAAAACGAATATGATGCG+TGG + Chr5:9017936-9017955 None:intergenic 35.0%
TTCAACAATCAAGGAAAGGT+TGG - Chr5:9024448-9024467 MsG0580024739.01.T01:intron 35.0%
TTCCAAGGAACAATATTCCT+TGG - Chr5:9014989-9015008 MsG0580024739.01.T01:CDS 35.0%
TTCCAAGGAATATTGTTCCT+TGG + Chr5:9014994-9015013 None:intergenic 35.0%
TTCGATATCCAAACGATCTT+AGG + Chr5:9018776-9018795 None:intergenic 35.0%
TTGAAGCTTCCATGGAAATT+GGG + Chr5:9019531-9019550 None:intergenic 35.0%
TTTAAAAAGGGGGGAATTCT+TGG - Chr5:9022253-9022272 MsG0580024739.01.T01:intron 35.0%
TTTCAACTTGGTTGTTCTGA+AGG - Chr5:9023166-9023185 MsG0580024739.01.T01:intron 35.0%
! AAGAATAATTTGGTTCGTCG+AGG - Chr5:9017293-9017312 MsG0580024739.01.T01:intron 35.0%
! AATATCTTTTGTGCTCTCCT+TGG - Chr5:9021315-9021334 MsG0580024739.01.T01:intron 35.0%
! ATCCACTATCCCCAAATTTT+AGG + Chr5:9022913-9022932 None:intergenic 35.0%
! ATGTTGGAAGCCTTTTGTAT+AGG - Chr5:9022783-9022802 MsG0580024739.01.T01:intron 35.0%
! CATGGAATTGAATAATGGAG+AGG - Chr5:9019694-9019713 MsG0580024739.01.T01:intron 35.0%
! CCATGAACATGTTTTATACC+CGG - Chr5:9015188-9015207 MsG0580024739.01.T01:CDS 35.0%
! CTTCTTGTTAACCCATGTTT+TGG + Chr5:9019230-9019249 None:intergenic 35.0%
! CTTTGAAAATAGCAGCTTTG+TGG - Chr5:9016337-9016356 MsG0580024739.01.T01:intron 35.0%
! GAATCGATTCAATTCACCTT+TGG + Chr5:9018232-9018251 None:intergenic 35.0%
! GATTTGTCATTTGCAGTTAG+AGG - Chr5:9023964-9023983 MsG0580024739.01.T01:intron 35.0%
! GCGGCAACTCAAATAAATTT+TGG - Chr5:9019268-9019287 MsG0580024739.01.T01:intron 35.0%
! GGAAACACATGATGGAATAT+TGG + Chr5:9015554-9015573 None:intergenic 35.0%
! GTTTCTAGGTTCTTTCTGAT+TGG - Chr5:9024700-9024719 MsG0580024739.01.T01:intron 35.0%
! TAATGATGGGACACATTTGT+TGG - Chr5:9014809-9014828 MsG0580024739.01.T01:three_prime_UTR 35.0%
! TCTAAAATCGAAGATGAGCA+AGG - Chr5:9018173-9018192 MsG0580024739.01.T01:intron 35.0%
! TTTATCCATCCAAGTTGAGT+CGG - Chr5:9021426-9021445 MsG0580024739.01.T01:intron 35.0%
! TTTGTTGTCTATAGACGAAG+CGG + Chr5:9021387-9021406 None:intergenic 35.0%
!! AAATAGTCAGCACTGACTTT+GGG + Chr5:9024498-9024517 None:intergenic 35.0%
!! ACATCTAGTTCTTTGTTGGT+TGG - Chr5:9017415-9017434 MsG0580024739.01.T01:intron 35.0%
!! ACTTCAACTGCTTTGAAGAA+AGG - Chr5:9023625-9023644 MsG0580024739.01.T01:intron 35.0%
!! ATCTAGTTCTTTGTTGGTTG+GGG - Chr5:9017417-9017436 MsG0580024739.01.T01:intron 35.0%
!! CATCTAGTTCTTTGTTGGTT+GGG - Chr5:9017416-9017435 MsG0580024739.01.T01:intron 35.0%
!! CTAGTCTTCTTTCCATTTTG+TGG - Chr5:9017105-9017124 MsG0580024739.01.T01:intron 35.0%
!! GCTATTTTCAAAGTCGGATT+GGG + Chr5:9016330-9016349 None:intergenic 35.0%
!! GGTGTGAATTGATTTGTGTT+TGG + Chr5:9020158-9020177 None:intergenic 35.0%
!! TCTGATTTGTTGAGAACCTT+CGG + Chr5:9024369-9024388 None:intergenic 35.0%
!! TCTTACGAGTTGATGTTGTT+TGG + Chr5:9020114-9020133 None:intergenic 35.0%
!! TCTTCTTGATTTGGTCTAGA+TGG + Chr5:9024324-9024343 None:intergenic 35.0%
!! TGGGATTAGTTTCACGAAAT+TGG - Chr5:9024144-9024163 MsG0580024739.01.T01:intron 35.0%
!! TGGTTTTCAAGACATGTTGT+TGG - Chr5:9021886-9021905 MsG0580024739.01.T01:intron 35.0%
!! TGTATAAGTGCGATAATGGA+TGG + Chr5:9021939-9021958 None:intergenic 35.0%
!! TTTGGCTTTCTTGCCAATAT+CGG + Chr5:9018214-9018233 None:intergenic 35.0%
!!! AAACTTGGGTTTTTTCTCCA+GGG + Chr5:9024542-9024561 None:intergenic 35.0%
!!! ATGGTTTTAGGAATCAGACA+TGG - Chr5:9022191-9022210 MsG0580024739.01.T01:intron 35.0%
!!! TGCTATTTTCAAAGTCGGAT+TGG + Chr5:9016331-9016350 None:intergenic 35.0%
!!! TTGCCATTTTCCATGATGTT+TGG - Chr5:9019166-9019185 MsG0580024739.01.T01:intron 35.0%
AACAATCAAGGAAAGGTTGG+GGG - Chr5:9024451-9024470 MsG0580024739.01.T01:intron 40.0%
AAGCTGCCTGATTATAGTTC+TGG - Chr5:9023869-9023888 MsG0580024739.01.T01:intron 40.0%
AATCAACGGCTAAAAACGTC+CGG - Chr5:9017956-9017975 MsG0580024739.01.T01:intron 40.0%
AATTGAGACAGCGTCAATTG+TGG - Chr5:9023711-9023730 MsG0580024739.01.T01:intron 40.0%
ACCTTGCCAGAACTATAATC+AGG + Chr5:9023878-9023897 None:intergenic 40.0%
ACTGCTCAACCCATTGATAT+TGG - Chr5:9017446-9017465 MsG0580024739.01.T01:intron 40.0%
ACTTCAAGGTTTGAGAGCAA+TGG + Chr5:9024572-9024591 None:intergenic 40.0%
AGAACACTATTACGGTTGGA+GGG - Chr5:9024386-9024405 MsG0580024739.01.T01:intron 40.0%
AGACAGGAACTTTGACAGAA+GGG - Chr5:9022108-9022127 MsG0580024739.01.T01:intron 40.0%
AGGCTCAGAAAAATTGTTGG+TGG - Chr5:9022539-9022558 MsG0580024739.01.T01:intron 40.0%
ATTACGTGGTCACCTTCTTA+AGG - Chr5:9021666-9021685 MsG0580024739.01.T01:intron 40.0%
ATTATTCTACCCTCCCTTCA+AGG + Chr5:9024663-9024682 None:intergenic 40.0%
ATTGAGACAGCGTCAATTGT+GGG - Chr5:9023712-9023731 MsG0580024739.01.T01:intron 40.0%
CAACAATCAAGGAAAGGTTG+GGG - Chr5:9024450-9024469 MsG0580024739.01.T01:intron 40.0%
CAGAGGCTCAGAAAAATTGT+TGG - Chr5:9022536-9022555 MsG0580024739.01.T01:intron 40.0%
CAGGTTTAAACTTCCAAACG+TGG - Chr5:9019141-9019160 MsG0580024739.01.T01:intron 40.0%
CCGGGTATAAAACATGTTCA+TGG + Chr5:9015191-9015210 None:intergenic 40.0%
CTCCACACTTAAACGTGATT+TGG - Chr5:9021127-9021146 MsG0580024739.01.T01:intron 40.0%
CTGGAGAAAAAACCCAAGTT+TGG - Chr5:9024541-9024560 MsG0580024739.01.T01:CDS 40.0%
CTGGTGAAAAACAAAAGTGG+AGG - Chr5:9019486-9019505 MsG0580024739.01.T01:intron 40.0%
CTTTCTGCTAGTCATAAGAG+CGG - Chr5:9021857-9021876 MsG0580024739.01.T01:intron 40.0%
GAAAAAACCCAAGTTTGGGT+TGG - Chr5:9024546-9024565 MsG0580024739.01.T01:CDS 40.0%
GAAAAAGGTCAGTGAATGTG+AGG + Chr5:9023823-9023842 None:intergenic 40.0%
GAAATTTCTTCCCACGGAAA+AGG + Chr5:9015163-9015182 None:intergenic 40.0%
GACACACTCAAAAGCAATTC+TGG - Chr5:9019188-9019207 MsG0580024739.01.T01:intron 40.0%
GAGATTGAGTGATTGATCAC+TGG - Chr5:9022624-9022643 MsG0580024739.01.T01:intron 40.0%
GATATTGGCAAGAAAGCCAA+AGG - Chr5:9018213-9018232 MsG0580024739.01.T01:intron 40.0%
GCAAGTTTCAACAGCAGTAA+TGG + Chr5:9016528-9016547 None:intergenic 40.0%
GCAGGCTATGATACTAAATC+TGG - Chr5:9024100-9024119 MsG0580024739.01.T01:intron 40.0%
GCATGCGAACCAATATCAAT+GGG + Chr5:9017458-9017477 None:intergenic 40.0%
GCCATAAATTGTAGCTTCTG+CGG - Chr5:9019249-9019268 MsG0580024739.01.T01:intron 40.0%
GCGATAATACCGACATTGTT+AGG - Chr5:9021289-9021308 MsG0580024739.01.T01:intron 40.0%
GGCAGAAACATCAAAGATAG+GGG + Chr5:9024044-9024063 None:intergenic 40.0%
GGTGATTCAAACGTATTGAG+TGG + Chr5:9022809-9022828 None:intergenic 40.0%
GTGAAAAACAAAAGTGGAGG+AGG - Chr5:9019489-9019508 MsG0580024739.01.T01:intron 40.0%
GTGGCAGAAACATCAAAGAT+AGG + Chr5:9024046-9024065 None:intergenic 40.0%
GTTATGAAATGCACTAGTCC+AGG + Chr5:9019748-9019767 None:intergenic 40.0%
GTTGAAGCTTCCATGGAAAT+TGG + Chr5:9019532-9019551 None:intergenic 40.0%
GTTGTAAAAGTCACACTCCA+AGG + Chr5:9017387-9017406 None:intergenic 40.0%
GTTTCATCTTACAGCACTAC+TGG - Chr5:9018352-9018371 MsG0580024739.01.T01:intron 40.0%
TAGACAGGAACTTTGACAGA+AGG - Chr5:9022107-9022126 MsG0580024739.01.T01:intron 40.0%
TAGACGAATCCAAGAGATGT+TGG + Chr5:9016605-9016624 None:intergenic 40.0%
TATGCAGTATGCAACATGTG+AGG + Chr5:9023092-9023111 None:intergenic 40.0%
TCAGACATGGAAGAAACAGA+TGG - Chr5:9022204-9022223 MsG0580024739.01.T01:intron 40.0%
TCGTCTTTGTGGATGGAAAA+AGG + Chr5:9023838-9023857 None:intergenic 40.0%
TCTATGTTTGGTTGAGCGTT+TGG - Chr5:9019106-9019125 MsG0580024739.01.T01:intron 40.0%
TCTGATGTGTGATTAGTGTC+TGG - Chr5:9018556-9018575 MsG0580024739.01.T01:intron 40.0%
TGAAACGGTAAGCTTCTGAT+CGG + Chr5:9018338-9018357 None:intergenic 40.0%
TGAAGCTTCCATGGAAATTG+GGG + Chr5:9019530-9019549 None:intergenic 40.0%
TGCCAAATCACGTTTAAGTG+TGG + Chr5:9021132-9021151 None:intergenic 40.0%
TGTCTATAGACAAAGCGGTT+TGG + Chr5:9021484-9021503 None:intergenic 40.0%
TTAGTGTGTGTTTGGTATGG+CGG + Chr5:9020244-9020263 None:intergenic 40.0%
TTATTCTACCCTCCCTTCAA+GGG + Chr5:9024662-9024681 None:intergenic 40.0%
TTGAGAAATCTGTAGAGGAC+AGG - Chr5:9022656-9022675 MsG0580024739.01.T01:intron 40.0%
TTGAGTGTGTCCAAACATCA+TGG + Chr5:9019179-9019198 None:intergenic 40.0%
TTGCAACCACGGTGAATAAA+GGG - Chr5:9016400-9016419 MsG0580024739.01.T01:intron 40.0%
TTGTTGTCTATAGACGAAGC+GGG + Chr5:9021386-9021405 None:intergenic 40.0%
TTTACTATTCCCAGCGTGAA+AGG - Chr5:9020449-9020468 MsG0580024739.01.T01:intron 40.0%
TTTCAGCTTGGTTGTTCTGA+AGG - Chr5:9022956-9022975 MsG0580024739.01.T01:intron 40.0%
TTTGCAACCACGGTGAATAA+AGG - Chr5:9016399-9016418 MsG0580024739.01.T01:intron 40.0%
! ATCCCTCTTTTTATGGTTCC+CGG + Chr5:9015083-9015102 None:intergenic 40.0%
! ATGTGAGGGTTGTATTGATC+TGG + Chr5:9023808-9023827 None:intergenic 40.0%
! GACTACTTGCTACACATTCA+GGG - Chr5:9020887-9020906 MsG0580024739.01.T01:intron 40.0%
! GCAATGAAAGCTTTTCAGCT+TGG - Chr5:9022944-9022963 MsG0580024739.01.T01:intron 40.0%
! GCTCGCTTTAAATGTTTCTG+AGG + Chr5:9021605-9021624 None:intergenic 40.0%
! GGAAATTTGTTCAGGCGATT+TGG - Chr5:9017511-9017530 MsG0580024739.01.T01:intron 40.0%
! GGTTGTATTGATCTGGAAGA+GGG + Chr5:9023801-9023820 None:intergenic 40.0%
! GTGAGTTGAGAAATCTGTAG+AGG - Chr5:9022651-9022670 MsG0580024739.01.T01:intron 40.0%
! GTTTCTGAAGACAATGTGGA+TGG + Chr5:9018029-9018048 None:intergenic 40.0%
! TAGAAGGTTTTCTGCCTTCT+AGG - Chr5:9015520-9015539 MsG0580024739.01.T01:CDS 40.0%
! TGACTACTTGCTACACATTC+AGG - Chr5:9020886-9020905 MsG0580024739.01.T01:intron 40.0%
! TTTGATGTTTCTGCCACTGT+TGG - Chr5:9024049-9024068 MsG0580024739.01.T01:intron 40.0%
!! AAGTCAGTGCTGACTATTTC+TGG - Chr5:9024499-9024518 MsG0580024739.01.T01:CDS 40.0%
!! ACACTGTCTCTGAAATTGTG+TGG - Chr5:9023941-9023960 MsG0580024739.01.T01:intron 40.0%
!! ATTTGTTCAGGCGATTTGGT+TGG - Chr5:9017515-9017534 MsG0580024739.01.T01:intron 40.0%
!! CACTGTCTCTGAAATTGTGT+GGG - Chr5:9023942-9023961 MsG0580024739.01.T01:intron 40.0%
!! CTGATTTGTTGAGAACCTTC+GGG + Chr5:9024368-9024387 None:intergenic 40.0%
!! GAAATAGTCAGCACTGACTT+TGG + Chr5:9024499-9024518 None:intergenic 40.0%
!! GCGCATTTGATGATGATTGT+CGG - Chr5:9021008-9021027 MsG0580024739.01.T01:intron 40.0%
!! TAGCTTTGATCTGTGTCAGA+GGG + Chr5:9024426-9024445 None:intergenic 40.0%
!! TCAACTGCTTTGAAGAAAGG+AGG - Chr5:9023628-9023647 MsG0580024739.01.T01:intron 40.0%
!! TCTTGATTTGGTCTAGATGG+TGG + Chr5:9024321-9024340 None:intergenic 40.0%
!!! CAAACTTGGGTTTTTTCTCC+AGG + Chr5:9024543-9024562 None:intergenic 40.0%
AAAACCATCCAAGCCTCCAA+GGG + Chr5:9022179-9022198 None:intergenic 45.0%
AAAGAGATGAACCGAGAGAC+AGG - Chr5:9019909-9019928 MsG0580024739.01.T01:intron 45.0%
AAATGGGAAACGGAAGCCAT+AGG + Chr5:9024753-9024772 None:intergenic 45.0%
AACCTAGAAACGCTCATCTG+TGG + Chr5:9024691-9024710 None:intergenic 45.0%
AAGAAAGGAGGACTCTCAAC+TGG - Chr5:9023640-9023659 MsG0580024739.01.T01:intron 45.0%
AAGAATGTGCTATGGTTCCC+AGG - Chr5:9023513-9023532 MsG0580024739.01.T01:intron 45.0%
ACATCCGTGAGATAAGAGTC+TGG - Chr5:9019628-9019647 MsG0580024739.01.T01:intron 45.0%
AGAAAGGAGGACTCTCAACT+GGG - Chr5:9023641-9023660 MsG0580024739.01.T01:intron 45.0%
AGAATGTGCTATGGTTCCCA+GGG - Chr5:9023514-9023533 MsG0580024739.01.T01:intron 45.0%
AGACAGGACACAACATAGAC+AGG + Chr5:9020968-9020987 None:intergenic 45.0%
AGCAGTTGTGTCCAATCATG+CGG + Chr5:9017992-9018011 None:intergenic 45.0%
AGTCATAAGAGCGGAGCATA+TGG - Chr5:9021866-9021885 MsG0580024739.01.T01:intron 45.0%
AGTTGAAGTGAGTGCCTGAA+AGG + Chr5:9023614-9023633 None:intergenic 45.0%
ATGCATGTTGACAGCAACGT+AGG - Chr5:9023141-9023160 MsG0580024739.01.T01:intron 45.0%
ATTACAGAGACAAGAGAGCC+TGG - Chr5:9019727-9019746 MsG0580024739.01.T01:intron 45.0%
CAAGCCTATTCCCACTAAGT+GGG + Chr5:9021216-9021235 None:intergenic 45.0%
CACGTTAGGTTAGCAGATTC+AGG - Chr5:9017893-9017912 MsG0580024739.01.T01:intron 45.0%
CAGAACACTATTACGGTTGG+AGG - Chr5:9024385-9024404 MsG0580024739.01.T01:intron 45.0%
CAGATGCGGTCAATTGTTGA+TGG + Chr5:9016559-9016578 None:intergenic 45.0%
CAGCAGCACTCTTCTTGATT+TGG + Chr5:9024333-9024352 None:intergenic 45.0%
CAGCGCTCATGTCTTCATAA+AGG - Chr5:9017490-9017509 MsG0580024739.01.T01:intron 45.0%
CATGCAGTACGCATCATGTA+AGG + Chr5:9022883-9022902 None:intergenic 45.0%
CGCATGCGAACCAATATCAA+TGG + Chr5:9017459-9017478 None:intergenic 45.0%
CTATTCCCACTAAGTGGGAT+GGG + Chr5:9021211-9021230 None:intergenic 45.0%
CTCTGACACAGATCAAAGCT+AGG - Chr5:9024425-9024444 MsG0580024739.01.T01:intron 45.0%
CTGTTGTGGATATTACCCGA+AGG - Chr5:9024350-9024369 MsG0580024739.01.T01:intron 45.0%
GAAAATGGCAAACCCACGTT+TGG + Chr5:9019157-9019176 None:intergenic 45.0%
GAAGCTATCGTCTTTGTGGA+TGG + Chr5:9023845-9023864 None:intergenic 45.0%
GAAGTACACATCGCAGTAGA+AGG + Chr5:9016304-9016323 None:intergenic 45.0%
GACAAACCCTTTATTCACCG+TGG + Chr5:9016409-9016428 None:intergenic 45.0%
GACAGGACACAACATAGACA+GGG + Chr5:9020967-9020986 None:intergenic 45.0%
GACGCAGAAAGTTACAGATG+CGG + Chr5:9016573-9016592 None:intergenic 45.0%
GAGCCTCTGCTGTCTATTAT+TGG + Chr5:9022525-9022544 None:intergenic 45.0%
GATTTGGCAAGAGTAGTACC+TGG - Chr5:9021143-9021162 MsG0580024739.01.T01:intron 45.0%
GCCGCAGAAGCTACAATTTA+TGG + Chr5:9019253-9019272 None:intergenic 45.0%
GCTGTTGAAAGTTATCACGC+AGG - Chr5:9022284-9022303 MsG0580024739.01.T01:intron 45.0%
GTACTTCCTGGTTATCATGG+TGG - Chr5:9023477-9023496 MsG0580024739.01.T01:intron 45.0%
TAAAACCATCCAAGCCTCCA+AGG + Chr5:9022180-9022199 None:intergenic 45.0%
TCAAATCGCGTTTGCAACCA+CGG - Chr5:9016389-9016408 MsG0580024739.01.T01:intron 45.0%
TCCCGGGAACCATAAAAAGA+GGG - Chr5:9015078-9015097 MsG0580024739.01.T01:CDS 45.0%
TCGGTATTATCGCTTGTGCT+AGG + Chr5:9021282-9021301 None:intergenic 45.0%
TGGCCAATAATAGACAGCAG+AGG - Chr5:9022519-9022538 MsG0580024739.01.T01:intron 45.0%
TGTCTGGCTATTGTACTTCC+TGG - Chr5:9023465-9023484 MsG0580024739.01.T01:intron 45.0%
TTCCACAGATGAGCGTTTCT+AGG - Chr5:9024686-9024705 MsG0580024739.01.T01:intron 45.0%
TTCCCGGGAACCATAAAAAG+AGG - Chr5:9015077-9015096 MsG0580024739.01.T01:CDS 45.0%
TTCTTAATGCCGTACTGCAG+CGG - Chr5:9023315-9023334 MsG0580024739.01.T01:intron 45.0%
TTTCCAGACACAAAGCTTGG+AGG + Chr5:9023423-9023442 None:intergenic 45.0%
TTTCCTATCAGTGGCGACAA+GGG - Chr5:9024271-9024290 MsG0580024739.01.T01:intron 45.0%
! CTTGGACAAGAGTTGAGTTG+AGG - Chr5:9022013-9022032 MsG0580024739.01.T01:intron 45.0%
! GCAACGTAGGCTTTTCAACT+TGG - Chr5:9023154-9023173 MsG0580024739.01.T01:intron 45.0%
! GGGTTGTATTGATCTGGAAG+AGG + Chr5:9023802-9023821 None:intergenic 45.0%
! GTCACTTTAGTCCCTGAATG+AGG - Chr5:9018608-9018627 MsG0580024739.01.T01:intron 45.0%
! TAATTTGGTTCGTCGAGGAG+TGG - Chr5:9017298-9017317 MsG0580024739.01.T01:intron 45.0%
! TCCCTCTTTTTATGGTTCCC+GGG + Chr5:9015082-9015101 None:intergenic 45.0%
! TTATTCCCACCCTTTTCCGT+GGG - Chr5:9015150-9015169 MsG0580024739.01.T01:CDS 45.0%
! TTCATGTAGCCGACTCAACT+TGG + Chr5:9021438-9021457 None:intergenic 45.0%
! TTGGAGGCTTGGATGGTTTT+AGG - Chr5:9022179-9022198 MsG0580024739.01.T01:intron 45.0%
! TTTATTCCCACCCTTTTCCG+TGG - Chr5:9015149-9015168 MsG0580024739.01.T01:CDS 45.0%
! TTTCCTCCAAGCTTTGTGTC+TGG - Chr5:9023417-9023436 MsG0580024739.01.T01:intron 45.0%
!! AGCGGTTTGGTTCAACACAA+TGG + Chr5:9021471-9021490 None:intergenic 45.0%
!! AGTGCTGACTATTTCTGGTG+AGG - Chr5:9024504-9024523 MsG0580024739.01.T01:CDS 45.0%
!! CGGTTTGGTTCAACACAATG+GGG + Chr5:9021469-9021488 None:intergenic 45.0%
!! CTAGCTTTGATCTGTGTCAG+AGG + Chr5:9024427-9024446 None:intergenic 45.0%
!! GCCTGATTATAGTTCTGGCA+AGG - Chr5:9023874-9023893 MsG0580024739.01.T01:intron 45.0%
!! GCGATAATGGATGGTTCGTA+GGG + Chr5:9021930-9021949 None:intergenic 45.0%
!! GCGGTTTGGTTCAACACAAT+GGG + Chr5:9021470-9021489 None:intergenic 45.0%
!! TGATTTGGTCTAGATGGTGG+AGG + Chr5:9024318-9024337 None:intergenic 45.0%
!! TGCGATAATGGATGGTTCGT+AGG + Chr5:9021931-9021950 None:intergenic 45.0%
!! TTCTGGTGAGGTTGATACCA+AGG - Chr5:9024516-9024535 MsG0580024739.01.T01:CDS 45.0%
!! AATTTAAAAATTAATAATGA+TGG - Chr5:9014795-9014814 MsG0580024739.01.T01:three_prime_UTR 5.0%
!! AATTTATTAGTATTAATTAA+AGG - Chr5:9019784-9019803 MsG0580024739.01.T01:intron 5.0%
!! ATAAATTAAAAATATAATAG+TGG + Chr5:9019771-9019790 None:intergenic 5.0%
!! ATTTAAAAATTAATAATGAT+GGG - Chr5:9014796-9014815 MsG0580024739.01.T01:three_prime_UTR 5.0%
!! ATTTATTAGTATTAATTAAA+GGG - Chr5:9019785-9019804 MsG0580024739.01.T01:intron 5.0%
!! TAAATTAAAAATATAATAGT+GGG + Chr5:9019770-9019789 None:intergenic 5.0%
!! TATAATAATTTCAAAATTTA+CGG + Chr5:9015958-9015977 None:intergenic 5.0%
!!! TAATTTTAAATAGAATTAAA+AGG - Chr5:9020042-9020061 MsG0580024739.01.T01:intron 5.0%
AACATGAACCCGCTGCAGTA+CGG + Chr5:9023327-9023346 None:intergenic 50.0%
AAGGGTTGGAGAACCAACAG+TGG + Chr5:9024065-9024084 None:intergenic 50.0%
ACACACGACATGGAAGATCC+TGG + Chr5:9021347-9021366 None:intergenic 50.0%
ACCTGGATGTGTGACATCCT+AGG - Chr5:9021160-9021179 MsG0580024739.01.T01:CDS 50.0%
AGAGGTAGATCGCAAGATCG+TGG + Chr5:9020554-9020573 None:intergenic 50.0%
AGCAATGGCCAACCCAAACT+TGG + Chr5:9024557-9024576 None:intergenic 50.0%
AGGTTAAGGTAGCATGGTCG+TGG + Chr5:9024000-9024019 None:intergenic 50.0%
ATCATGCGGGAGTGATCAAC+CGG + Chr5:9017978-9017997 None:intergenic 50.0%
ATCGAAGATGAGCAAGGGAC+CGG - Chr5:9018179-9018198 MsG0580024739.01.T01:intron 50.0%
ATGCCAATGCGAGACTGACA+AGG - Chr5:9022708-9022727 MsG0580024739.01.T01:intron 50.0%
CACATCGCAGTAGAAGGCAA+TGG + Chr5:9016298-9016317 None:intergenic 50.0%
CAGTGTAGCGACTGAGGTTA+AGG + Chr5:9024014-9024033 None:intergenic 50.0%
CCAAGCCTATTCCCACTAAG+TGG + Chr5:9021217-9021236 None:intergenic 50.0%
CCAATATCGGAGTAGAGACC+CGG + Chr5:9018201-9018220 None:intergenic 50.0%
CCACTTAGTGGGAATAGGCT+TGG - Chr5:9021214-9021233 MsG0580024739.01.T01:intron 50.0%
CCATCCCACTTAGTGGGAAT+AGG - Chr5:9021209-9021228 MsG0580024739.01.T01:intron 50.0%
CCTATTCCCACTAAGTGGGA+TGG + Chr5:9021212-9021231 None:intergenic 50.0%
CGACTGAGGTTAAGGTAGCA+TGG + Chr5:9024006-9024025 None:intergenic 50.0%
CTCATTCCAAGGACTTACCC+GGG + Chr5:9014708-9014727 None:intergenic 50.0%
CTTAGTGGGAATAGGCTTGG+TGG - Chr5:9021217-9021236 MsG0580024739.01.T01:intron 50.0%
CTTTCCTATCAGTGGCGACA+AGG - Chr5:9024270-9024289 MsG0580024739.01.T01:intron 50.0%
GAAAGGAGGACTCTCAACTG+GGG - Chr5:9023642-9023661 MsG0580024739.01.T01:intron 50.0%
GAGGTAGATCGCAAGATCGT+GGG + Chr5:9020553-9020572 None:intergenic 50.0%
GCAATGGCCAACCCAAACTT+GGG + Chr5:9024556-9024575 None:intergenic 50.0%
GCACTGTGCTTCACGAAACA+GGG + Chr5:9018105-9018124 None:intergenic 50.0%
GCAGTTGTGTCCAATCATGC+GGG + Chr5:9017991-9018010 None:intergenic 50.0%
GCTCATTCCAAGGACTTACC+CGG + Chr5:9014709-9014728 None:intergenic 50.0%
GCTCTTCGTTGAAGCTTCCA+TGG + Chr5:9019539-9019558 None:intergenic 50.0%
GGAAAGCCACCATGATAACC+AGG + Chr5:9023486-9023505 None:intergenic 50.0%
GGCTCCAGACTCTTATCTCA+CGG + Chr5:9019635-9019654 None:intergenic 50.0%
GGTTCTATGTTGTGCTTCGG+AGG - Chr5:9017329-9017348 MsG0580024739.01.T01:intron 50.0%
GGTTCTCCAACCCTTGCATT+TGG - Chr5:9024070-9024089 MsG0580024739.01.T01:intron 50.0%
GTACGCATGTACCTGTCTCT+CGG + Chr5:9019923-9019942 None:intergenic 50.0%
GTGCAACACAAGGACTTCCT+AGG + Chr5:9021180-9021199 None:intergenic 50.0%
GTGGCAAAGAGCTCATTCCA+AGG + Chr5:9014719-9014738 None:intergenic 50.0%
GTTGATCACTCCCGCATGAT+TGG - Chr5:9017978-9017997 MsG0580024739.01.T01:intron 50.0%
TCAAAAAACAGCGCCACCCT+TGG - Chr5:9022160-9022179 MsG0580024739.01.T01:intron 50.0%
TCAGCACCAAATGCAAGGGT+TGG + Chr5:9024079-9024098 None:intergenic 50.0%
TCATTCCAAGGACTTACCCG+GGG + Chr5:9014707-9014726 None:intergenic 50.0%
TCCTAGGATGTCACACATCC+AGG + Chr5:9021164-9021183 None:intergenic 50.0%
TCTTAATGCCGTACTGCAGC+GGG - Chr5:9023316-9023335 MsG0580024739.01.T01:intron 50.0%
TGCACTGTGCTTCACGAAAC+AGG + Chr5:9018106-9018125 None:intergenic 50.0%
TGCCTCAGCACCAAATGCAA+GGG + Chr5:9024083-9024102 None:intergenic 50.0%
TGGAATGAGCTCTTTGCCAC+TGG - Chr5:9014719-9014738 MsG0580024739.01.T01:three_prime_UTR 50.0%
TTCTTCCCACGGAAAAGGGT+GGG + Chr5:9015158-9015177 None:intergenic 50.0%
TTCTTCTCCTTCAACCGTGC+CGG + Chr5:9020620-9020639 None:intergenic 50.0%
TTGCTTCAGTGTAGCGACTG+AGG + Chr5:9024020-9024039 None:intergenic 50.0%
TTTCTTCCCACGGAAAAGGG+TGG + Chr5:9015159-9015178 None:intergenic 50.0%
! GAAGATCCTGGTTCGAACCA+AGG + Chr5:9021335-9021354 None:intergenic 50.0%
! TGTAGCCGACTCAACTTGGA+TGG + Chr5:9021434-9021453 None:intergenic 50.0%
!! AACCCTTGCATTTGGTGCTG+AGG - Chr5:9024078-9024097 MsG0580024739.01.T01:intron 50.0%
!! CAAGAAGAGTGCTGCTGTTG+TGG - Chr5:9024336-9024355 MsG0580024739.01.T01:intron 50.0%
!! TGGAAGTCTTGTTCTCCGAG+AGG - Chr5:9024825-9024844 MsG0580024739.01.T01:CDS 50.0%
AAAAACAGCGCCACCCTTGG+AGG - Chr5:9022163-9022182 MsG0580024739.01.T01:intron 55.0%
AAACGGGTCACATGGGTCGA+AGG - Chr5:9020496-9020515 MsG0580024739.01.T01:intron 55.0%
AACGGGTCACATGGGTCGAA+GGG - Chr5:9020497-9020516 MsG0580024739.01.T01:intron 55.0%
AATCGAACCCGGTATTCCCC+GGG - Chr5:9014688-9014707 MsG0580024739.01.T01:three_prime_UTR 55.0%
ACGGGTCAAAACGGGTCACA+TGG - Chr5:9020488-9020507 MsG0580024739.01.T01:intron 55.0%
AGATCGCAAGATCGTGGGAG+CGG + Chr5:9020548-9020567 None:intergenic 55.0%
AGGACTCTCAACTGGGGATG+TGG - Chr5:9023648-9023667 MsG0580024739.01.T01:intron 55.0%
AGGACTTACCCGGGGAATAC+CGG + Chr5:9014699-9014718 None:intergenic 55.0%
AGGCAAGAACCGGGTCAAGA+CGG - Chr5:9020469-9020488 MsG0580024739.01.T01:intron 55.0%
ATACCGGGTTCGATTCCCAG+AGG + Chr5:9014683-9014702 None:intergenic 55.0%
CAACATAGACAGGGCGACAC+CGG + Chr5:9020958-9020977 None:intergenic 55.0%
CAGCGTGAAAGGCAAGAACC+GGG - Chr5:9020460-9020479 MsG0580024739.01.T01:intron 55.0%
CCAGCGTGAAAGGCAAGAAC+CGG - Chr5:9020459-9020478 MsG0580024739.01.T01:intron 55.0%
CCGGGTCTCTACTCCGATAT+TGG - Chr5:9018198-9018217 MsG0580024739.01.T01:intron 55.0%
CGGGTCAAAACGGGTCACAT+GGG - Chr5:9020489-9020508 MsG0580024739.01.T01:intron 55.0%
CGGGTCAAGACGGGTCAAAA+CGG - Chr5:9020479-9020498 MsG0580024739.01.T01:intron 55.0%
CGGTTCTTGCCTTTCACGCT+GGG + Chr5:9020461-9020480 None:intergenic 55.0%
CGTCGAGGAGTGGTTCCATT+AGG - Chr5:9017308-9017327 MsG0580024739.01.T01:intron 55.0%
CGTTTGGAGAGCCCAAACAC+AGG - Chr5:9019122-9019141 MsG0580024739.01.T01:intron 55.0%
CTGCCTCAGCACCAAATGCA+AGG + Chr5:9024084-9024103 None:intergenic 55.0%
GAATCGAACCCGGTATTCCC+CGG - Chr5:9014687-9014706 MsG0580024739.01.T01:three_prime_UTR 55.0%
GAGCTCGCGTTTGACAACCT+TGG - Chr5:9020669-9020688 MsG0580024739.01.T01:intron 55.0%
GCACCTTGTCAGTCTCGCAT+TGG + Chr5:9022714-9022733 None:intergenic 55.0%
GGGTCAAGACGGGTCAAAAC+GGG - Chr5:9020480-9020499 MsG0580024739.01.T01:intron 55.0%
GTATTCCCCGGGTAAGTCCT+TGG - Chr5:9014699-9014718 MsG0580024739.01.T01:three_prime_UTR 55.0%
GTGCTTCACGAAACAGGGTG+TGG + Chr5:9018100-9018119 None:intergenic 55.0%
GTGTGTGTTTGGTATGGCGG+TGG + Chr5:9020241-9020260 None:intergenic 55.0%
GTTAGCAGATTCAGGACCGC+TGG - Chr5:9017901-9017920 MsG0580024739.01.T01:intron 55.0%
TACCGGGTTCGATTCCCAGA+GGG + Chr5:9014682-9014701 None:intergenic 55.0%
TCACCCTTGTCGCCACTGAT+AGG + Chr5:9024277-9024296 None:intergenic 55.0%
TCGAAGATGAGCAAGGGACC+GGG - Chr5:9018180-9018199 MsG0580024739.01.T01:intron 55.0%
TTCCCACTAAGTGGGATGGG+CGG + Chr5:9021208-9021227 None:intergenic 55.0%
TTGGGAAGAGCTCGTGCTGT+AGG + Chr5:9024480-9024499 None:intergenic 55.0%
! CAGCGGGTTCATGTTGAAGG+TGG - Chr5:9023332-9023351 MsG0580024739.01.T01:intron 55.0%
! CTGCAGCGGGTTCATGTTGA+AGG - Chr5:9023329-9023348 MsG0580024739.01.T01:intron 55.0%
! GGTCAAGCGTTGTTCCCTCT+GGG - Chr5:9014665-9014684 MsG0580024739.01.T01:three_prime_UTR 55.0%
! TGCTCTCCTTGGTTCGAACC+AGG - Chr5:9021326-9021345 MsG0580024739.01.T01:intron 55.0%
! TGGGTCGAAGGGTGTGAAAC+TGG - Chr5:9020508-9020527 MsG0580024739.01.T01:intron 55.0%
! TGGTCAAGCGTTGTTCCCTC+TGG - Chr5:9014664-9014683 MsG0580024739.01.T01:three_prime_UTR 55.0%
! TTCCCTCTGGGAATCGAACC+CGG - Chr5:9014677-9014696 MsG0580024739.01.T01:three_prime_UTR 55.0%
!! CGGTGCTACATAGCCGACAA+CGG + Chr5:9018531-9018550 None:intergenic 55.0%
!! CGTTTTGACCCGTCTTGACC+CGG + Chr5:9020481-9020500 None:intergenic 55.0%
!! CTTGCATTTGGTGCTGAGGC+AGG - Chr5:9024082-9024101 MsG0580024739.01.T01:intron 55.0%
!! TGAGGTTGATACCAAGGCCC+TGG - Chr5:9024522-9024541 MsG0580024739.01.T01:CDS 55.0%
!!! GGGTTTTTTCTCCAGGGCCT+TGG + Chr5:9024536-9024555 None:intergenic 55.0%
ACCATCCAAGCCTCCAAGGG+TGG + Chr5:9022176-9022195 None:intergenic 60.0%
ATTCAGGACCGCTGGCATGC+GGG - Chr5:9017909-9017928 MsG0580024739.01.T01:intron 60.0%
CCACTGGAGCCCAAGCAACT+CGG - Chr5:9014735-9014754 MsG0580024739.01.T01:three_prime_UTR 60.0%
CCGGTTCTTGCCTTTCACGC+TGG + Chr5:9020462-9020481 None:intergenic 60.0%
CTCAGCTGAGTCGTGACCCT+GGG + Chr5:9023533-9023552 None:intergenic 60.0%
CTCTCAACTGGGGATGTGGC+AGG - Chr5:9023652-9023671 MsG0580024739.01.T01:intron 60.0%
GATTCAGGACCGCTGGCATG+CGG - Chr5:9017908-9017927 MsG0580024739.01.T01:intron 60.0%
GGACTTACCCGGGGAATACC+GGG + Chr5:9014698-9014717 None:intergenic 60.0%
GGCAAGAACCGGGTCAAGAC+GGG - Chr5:9020470-9020489 MsG0580024739.01.T01:intron 60.0%
GGTGCGCAAATCGTGGGAGA+GGG + Chr5:9020594-9020613 None:intergenic 60.0%
TCCCACTAAGTGGGATGGGC+GGG + Chr5:9021207-9021226 None:intergenic 60.0%
TCCCGCCCATCCCACTTAGT+GGG - Chr5:9021203-9021222 MsG0580024739.01.T01:intron 60.0%
TCTCAGCTGAGTCGTGACCC+TGG + Chr5:9023534-9023553 None:intergenic 60.0%
AATCGTGGGAGAGGGCGGAG+CGG + Chr5:9020586-9020605 None:intergenic 65.0%
ATTTGCGCACCGCTCCGGCA+CGG - Chr5:9020603-9020622 MsG0580024739.01.T01:intron 65.0%
CCACGATTTGCGCACCGCTC+CGG - Chr5:9020598-9020617 MsG0580024739.01.T01:intron 65.0%
CCGAGTTGCTTGGGCTCCAG+TGG + Chr5:9014738-9014757 None:intergenic 65.0%
CGGAGCGGTGCGCAAATCGT+GGG + Chr5:9020600-9020619 None:intergenic 65.0%
CGGTGCGCAAATCGTGGGAG+AGG + Chr5:9020595-9020614 None:intergenic 65.0%
CTAAGTGGGATGGGCGGGAG+AGG + Chr5:9021202-9021221 None:intergenic 65.0%
CTACCCTCCCTTCAAGGGCC+AGG + Chr5:9024657-9024676 None:intergenic 65.0%
CTCCCGCCCATCCCACTTAG+TGG - Chr5:9021202-9021221 MsG0580024739.01.T01:intron 65.0%
CTCCTTCAACCGTGCCGGAG+CGG + Chr5:9020615-9020634 None:intergenic 65.0%
GCCACCCTTGGAGGCTTGGA+TGG - Chr5:9022172-9022191 MsG0580024739.01.T01:intron 65.0%
GCGCAAATCGTGGGAGAGGG+CGG + Chr5:9020591-9020610 None:intergenic 65.0%
TGCGATCTACCTCTGCGCGC+CGG - Chr5:9020560-9020579 MsG0580024739.01.T01:intron 65.0%
! GGCGGGAGAGGTGCAACACA+AGG + Chr5:9021190-9021209 None:intergenic 65.0%
CACCGCTCCGGCACGGTTGA+AGG - Chr5:9020610-9020629 MsG0580024739.01.T01:intron 70.0%
CAGCGCCACCCTTGGAGGCT+TGG - Chr5:9022168-9022187 MsG0580024739.01.T01:intron 70.0%
CCGGAGCGGTGCGCAAATCG+TGG + Chr5:9020601-9020620 None:intergenic 70.0%
TGCGTGGGCCCGCATGCCAG+CGG + Chr5:9017920-9017939 None:intergenic 75.0%
! GTGGGAGAGGGCGGAGCGGC+CGG + Chr5:9020582-9020601 None:intergenic 80.0%
! GCGGAGCGGCCGGCGCGCAG+AGG + Chr5:9020572-9020591 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
Chr5 gene 9014656 9024870 9014656 ID=MsG0580024739.01;Name=MsG0580024739.01
Chr5 mRNA 9014656 9024870 9014656 ID=MsG0580024739.01.T01;Parent=MsG0580024739.01;Name=MsG0580024739.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.66|0.71|0.71|1|1|7|282|310
Chr5 exon 9014656 9015244 9014656 ID=MsG0580024739.01.T01:exon:1860;Parent=MsG0580024739.01.T01
Chr5 exon 9015338 9015546 9015338 ID=MsG0580024739.01.T01:exon:1859;Parent=MsG0580024739.01.T01
Chr5 exon 9015631 9015717 9015631 ID=MsG0580024739.01.T01:exon:1858;Parent=MsG0580024739.01.T01
Chr5 exon 9015797 9015907 9015797 ID=MsG0580024739.01.T01:exon:1857;Parent=MsG0580024739.01.T01
Chr5 exon 9021148 9021215 9021148 ID=MsG0580024739.01.T01:exon:1856;Parent=MsG0580024739.01.T01
Chr5 exon 9024487 9024583 9024487 ID=MsG0580024739.01.T01:exon:1855;Parent=MsG0580024739.01.T01
Chr5 exon 9024817 9024870 9024817 ID=MsG0580024739.01.T01:exon:1854;Parent=MsG0580024739.01.T01
Chr5 CDS 9024817 9024870 9024817 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 CDS 9024487 9024583 9024487 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 CDS 9021148 9021215 9021148 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 CDS 9015797 9015907 9015797 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 CDS 9015631 9015717 9015631 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 CDS 9015338 9015546 9015338 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 CDS 9014938 9015244 9014938 ID=MsG0580024739.01.T01:cds;Parent=MsG0580024739.01.T01
Chr5 three_prime_UTR 9014656 9014937 9014656 ID=MsG0580024739.01.T01:three_prime_utr;Parent=MsG0580024739.01.T01
Gene Sequence

>MsG0580024739.01.T01

ATGCGCACTGGTCAAGCGTTGTTCCCTCTGGGAATCGAACCCGGTATTCCCCGGACCTCAAAGTTGAAACTGTGTGTTTGTTTCAAGTTTACCAAATTTATTCCAAGGAACAATATTCCTTGGAACATAGAGAAGAGAATTTTATTTCAAGATCTTTTGACAAAGGACTATAACTCCGATCAGAAGCTTACCGTTTCATCTTACAGCACTACTGGAGTTGCACTCACTTCAACTGCTTTGAAGAAAGGAGGACTCTCAACTGGGGATGTGGCAGGACAATACAAGTATAAGAACACCCTTATTGATGTCAAAATTGAGACAGCGTCAATTATCAATACAACCCTCACATTCACTGACCTTTTTCCATCCACAAAGACGATAGCTTCAATTAAGCTGCCTGATTATAGTTCTGGCAAGTTAGAGGTTCAATACTTCCACGACCATGCTACCTTAACCTCAGTCGCTACACTGAAGCAATCCCCTATCTTTGATGTTTCTGCCACTGTTGGTTCTCCAACCCTTGCATTTGGTGCTGAGGCAGGCTATGATACTAAATCTGGTAGTTTTACTAAATACAACACTGGGATTAGTTTCACGAAATTGGATTCATCTGCTTCAGTAATCATTGGCGACAAGGGTGACAGCATTAAAGTATCATACCTCCACCATCTAGACCAAATCAAGAAGAGTGCTGCTGTTGTGGATATTACCCGAAGGTTCTCAACAAATCAGAACACTATTACGGTTGGAGGGTCTTTTGCTGTTGACCCTCTGACACAGATCAAAGCTAGGTTCAACAATCAAGGAAAGGTTGGGGGACTCCTACAGCACGAGCTCTTCCCAAAGTCAGTGCTGACTATTTCTGGTGAGGTTGATACCAAGGCCCTGGAGAAAAAACCCAAGTTTGGGTTGGCCATTGCTCTCAAACCTTGA
Protein sequence

>MsG0580024739.01.T01

MRTGQALFPLGIEPGIPRTSKLKLCVCFKFTKFIPRNNIPWNIEKRILFQDLLTKDYNSDQKLTVSSYSTTGVALTSTALKKGGLSTGDVAGQYKYKNTLIDVKIETASIINTTLTFTDLFPSTKTIASIKLPDYSSGKLEVQYFHDHATLTSVATLKQSPIFDVSATVGSPTLAFGAEAGYDTKSGSFTKYNTGISFTKLDSSASVIIGDKGDSIKVSYLHHLDQIKKSAAVVDITRRFSTNQNTITVGGSFAVDPLTQIKARFNNQGKVGGLLQHELFPKSVLTISGEVDTKALEKKPKFGLAIALKP*