AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036177.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036177.01.T01 MTR_7g009330 98.917 277 3 0 1 277 1 277 0.0 557
MsG0780036177.01.T01 MTR_6g011390 68.953 277 84 1 3 277 2 278 7.15e-144 405
MsG0780036177.01.T01 MTR_8g469150 58.029 274 115 0 4 277 3 276 2.17e-116 335
MsG0780036177.01.T01 MTR_8g469150 57.736 265 112 0 4 268 3 267 1.22e-111 323
MsG0780036177.01.T01 MTR_5g015580 50.545 275 136 0 3 277 2 276 8.48e-91 270
MsG0780036177.01.T01 MTR_1g018205 42.238 277 160 0 1 277 1 277 1.98e-75 231
MsG0780036177.01.T01 MTR_4g128300 42.086 278 158 2 3 277 2 279 3.26e-74 228
MsG0780036177.01.T01 MTR_4g107840 34.397 282 139 6 3 277 2 244 4.69e-48 160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036177.01.T01 AT3G01280 61.679 274 105 0 4 277 3 276 9.97e-128 364
MsG0780036177.01.T01 AT5G15090 59.854 274 108 1 4 277 3 274 8.92e-124 354
MsG0780036177.01.T01 AT5G15090 59.854 274 108 1 4 277 3 274 8.92e-124 354
MsG0780036177.01.T01 AT5G67500 48.364 275 142 0 3 277 2 276 9.99e-90 268
MsG0780036177.01.T01 AT5G67500 47.368 266 140 0 3 268 2 267 4.03e-84 254
MsG0780036177.01.T01 AT5G67500 44.040 302 142 1 3 277 2 303 1.51e-83 253
MsG0780036177.01.T01 AT5G57490 43.750 272 151 1 6 277 5 274 1.42e-80 244
MsG0780036177.01.T01 AT3G49920 37.091 275 123 4 3 277 2 226 8.43e-48 159
MsG0780036177.01.T01 AT3G49920 43.443 122 60 2 3 115 2 123 5.10e-23 92.0
MsG0780036177.01.T01 AT3G49920 43.443 122 60 2 3 115 2 123 5.10e-23 92.0
MsG0780036177.01.T01 AT3G49920 52.632 76 36 0 3 78 2 77 8.39e-20 82.8
MsG0780036177.01.T01 AT5G37610 31.081 148 98 2 112 257 2 147 6.55e-19 82.0

Find 134 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGTTGATTCTCTTCT+TGG 0.147123 7:-4326801 MsG0780036177.01.T01:three_prime_UTR
AGAAAGGTTAGAAATAAATT+AGG 0.182856 7:-4331835 None:intergenic
CAAGATAGATCAAAACTATC+AGG 0.275931 7:+4326867 None:intergenic
ACCATGTTTAATAAATTAGA+AGG 0.303491 7:+4325914 None:intergenic
GAAATGGTGATGAGTGATTT+AGG 0.306493 7:+4326955 None:intergenic
GGAACTAATGCTCTTGCATT+TGG 0.326707 7:-4327775 MsG0780036177.01.T01:CDS
TTCTTATGATACCAAACTTC+GGG 0.331615 7:-4327743 MsG0780036177.01.T01:CDS
GCCCTAGGTGAATGCTTATA+TGG 0.339625 7:-4326020 MsG0780036177.01.T01:three_prime_UTR
CCAACATAATTAAGAGTCTA+TGG 0.339864 7:-4326223 MsG0780036177.01.T01:three_prime_UTR
TGCTGTATTTGAACTCTTGT+TGG 0.342551 7:-4326503 MsG0780036177.01.T01:three_prime_UTR
TTGGATAGCTGCCAAGTTAA+TGG 0.342875 7:-4326165 MsG0780036177.01.T01:three_prime_UTR
GTTAGAAATAAATTAGGGTT+CGG 0.344296 7:-4331829 MsG0780036177.01.T01:five_prime_UTR
TTAGAAATAAATTAGGGTTC+GGG 0.353146 7:-4331828 MsG0780036177.01.T01:five_prime_UTR
ATGAAATTGAGGTAGGCTTT+AGG 0.354453 7:-4326842 MsG0780036177.01.T01:three_prime_UTR
GAAAGGTTAGAAATAAATTA+GGG 0.360417 7:-4331834 None:intergenic
CCAGTGGTGGTTAACCGTTT+TGG 0.362301 7:-4326114 MsG0780036177.01.T01:three_prime_UTR
AACCCAGTTGTCAACTTATC+TGG 0.362397 7:-4327805 MsG0780036177.01.T01:CDS
TGCTAAGGTTGGATTGAGTT+TGG 0.368402 7:-4326899 MsG0780036177.01.T01:CDS
ACACCAGATAAGTTGACAAC+TGG 0.376037 7:+4327802 None:intergenic
GGCTATGGAGGTGGCTTTGA+TGG 0.383518 7:-4326194 MsG0780036177.01.T01:three_prime_UTR
AAAGTTCCTGATCCAGCATC+TGG 0.383518 7:-4328053 MsG0780036177.01.T01:CDS
TTGATGTTGATTCTCTTCTT+GGG 0.390960 7:-4326800 MsG0780036177.01.T01:three_prime_UTR
GACGCCACTCGTGCTGGATA+AGG 0.393225 7:+4326977 None:intergenic
TCTTCAAGGTCTAGTTGAAT+GGG 0.402943 7:-4325886 MsG0780036177.01.T01:three_prime_UTR
AGGTAGAGACGGTAAACTTC+TGG 0.407388 7:+4331182 None:intergenic
AAAGAGACTTGTTGAGCCTC+TGG 0.414752 7:+4326682 None:intergenic
TTATGTTGGATTACTACAAA+AGG 0.416946 7:+4326237 None:intergenic
ACGCCACTCGTGCTGGATAA+GGG 0.420370 7:+4326978 None:intergenic
CCATAGACTCTTAATTATGT+TGG 0.424996 7:+4326223 None:intergenic
AAGAAGTTATCTACTTCTGT+TGG 0.430855 7:-4326434 MsG0780036177.01.T01:three_prime_UTR
GGGCATTTAAGAGTAACATT+TGG 0.432897 7:+4326703 None:intergenic
GATCATGGGGTGCAGGTTGG+TGG 0.433199 7:-4326077 MsG0780036177.01.T01:three_prime_UTR
ATCTTCAAGGTCTAGTTGAA+TGG 0.436883 7:-4325887 MsG0780036177.01.T01:three_prime_UTR
GGTTGGTGGTTCATTGAGGC+TGG 0.445474 7:-4326063 MsG0780036177.01.T01:three_prime_UTR
GGCACTTGCCTTGGCTGAGT+TGG 0.447115 7:+4326999 None:intergenic
CTGGAGTAAGCGGCAACATT+GGG 0.447370 7:-4327837 MsG0780036177.01.T01:CDS
CACTGCTGTTGGTGTTGACA+TGG 0.447929 7:-4327109 MsG0780036177.01.T01:CDS
CAACCTTGTAGAAATAAAGT+AGG 0.449236 7:-4326736 MsG0780036177.01.T01:three_prime_UTR
ACCTTCCCAGATGCTGGATC+AGG 0.454785 7:+4328047 None:intergenic
ACTCAAAGAGTATCAATTCT+CGG 0.455409 7:+4326652 None:intergenic
GGTGTCTAGCTCAGTAGAAA+TGG 0.457756 7:+4326939 None:intergenic
AAAGAAAGGTGAACTGTTTG+TGG 0.462533 7:-4329054 MsG0780036177.01.T01:CDS
ATTTAGGACGCCACTCGTGC+TGG 0.462631 7:+4326971 None:intergenic
AAACATGGTCAAAATCTTCA+AGG 0.462974 7:-4325900 MsG0780036177.01.T01:three_prime_UTR
AGTCTATGGTTGAGTGGCTA+TGG 0.463222 7:-4326209 MsG0780036177.01.T01:three_prime_UTR
TATCTTACCTTCCCAGATGC+TGG 0.465903 7:+4328041 None:intergenic
GCTGGAGTAAGCGGCAACAT+TGG 0.466742 7:-4327838 MsG0780036177.01.T01:CDS
TGCAGGTTGGTGGTTCATTG+AGG 0.467274 7:-4326067 MsG0780036177.01.T01:three_prime_UTR
GAATGCTTATATGGTAGCTT+TGG 0.471291 7:-4326011 MsG0780036177.01.T01:three_prime_UTR
CCGTTAGTGAGCATTTGAAA+TGG 0.471531 7:-4326553 MsG0780036177.01.T01:three_prime_UTR
CTTCACACCAGGAGCAGGTT+CGG 0.471845 7:+4328091 None:intergenic
CTGGATAAGGGCACTTGCCT+TGG 0.473358 7:+4326990 None:intergenic
CGACCCTTCAATGTTGTCAA+TGG 0.474649 7:+4327027 None:intergenic
CTTGGGTAAAGAAATGTTCA+AGG 0.480922 7:-4326783 MsG0780036177.01.T01:three_prime_UTR
TTTATCAAAGATGACTTGCT+TGG 0.483885 7:-4327691 MsG0780036177.01.T01:CDS
GAATCAAGCTATGGCTGCTA+AGG 0.489854 7:-4331738 MsG0780036177.01.T01:exon
CTACAGGCTATCACATCATC+AGG 0.489864 7:-4329080 MsG0780036177.01.T01:intron
GAGCTAACAAAATCTAATGT+TGG 0.491591 7:-4327721 MsG0780036177.01.T01:CDS
TCTATCTTGTCATGAAATTG+AGG 0.493322 7:-4326853 MsG0780036177.01.T01:three_prime_UTR
GGATCCATTGACAACATTGA+AGG 0.493835 7:-4327031 MsG0780036177.01.T01:CDS
CAATACTTGCATGACTATGC+TGG 0.495247 7:-4327856 MsG0780036177.01.T01:CDS
TTAGCAGCCATAGCTTGATT+CGG 0.496192 7:+4331740 None:intergenic
TCCTTCTAATTTATTAAACA+TGG 0.496761 7:-4325915 MsG0780036177.01.T01:three_prime_UTR
CCAAAACGGTTAACCACCAC+TGG 0.497169 7:+4326114 None:intergenic
AGAATAGTGGAAAATTTCAA+TGG 0.497257 7:+4326463 None:intergenic
TATGTTGGATTACTACAAAA+GGG 0.508651 7:+4326238 None:intergenic
TTTCTTATGATACCAAACTT+CGG 0.509916 7:-4327744 MsG0780036177.01.T01:CDS
TTTGATCATGGGGTGCAGGT+TGG 0.512822 7:-4326080 MsG0780036177.01.T01:three_prime_UTR
GGCTGGTTGAAGATGGTGGT+TGG 0.514582 7:-4326046 MsG0780036177.01.T01:three_prime_UTR
ACATCATCAGGTACAAAGAA+AGG 0.517422 7:-4329068 MsG0780036177.01.T01:CDS
CCAACAGCAGTGTTGGTCAC+GGG 0.519304 7:+4327120 None:intergenic
AAACCTACTTTATTTCTACA+AGG 0.523937 7:+4326733 None:intergenic
ACAATTTGACACCATTAACT+TGG 0.529498 7:+4326154 None:intergenic
TGGTTGAGTGGCTATGGAGG+TGG 0.534621 7:-4326203 MsG0780036177.01.T01:three_prime_UTR
TCATTGAGGCTGGTTGAAGA+TGG 0.534807 7:-4326053 MsG0780036177.01.T01:three_prime_UTR
GTCTCTACCTACTCACCCAC+TGG 0.537192 7:-4331169 MsG0780036177.01.T01:CDS
ACTAATGCTCTTGCATTTGG+TGG 0.539456 7:-4327772 MsG0780036177.01.T01:CDS
AAGAAAGGTGAACTGTTTGT+GGG 0.540867 7:-4329053 MsG0780036177.01.T01:CDS
ACTGTCACCGAACCTGCTCC+TGG 0.544931 7:-4328098 MsG0780036177.01.T01:CDS
CACCAGATAAGTTGACAACT+GGG 0.545239 7:+4327803 None:intergenic
CTTTCCACCGAATCAAGCTA+TGG 0.549905 7:-4331747 MsG0780036177.01.T01:exon
GCCGATGTCAGAGTAGAGAC+CGG 0.550627 7:+4331712 None:intergenic
CTTATAATAGCCTTCACACC+AGG 0.553164 7:+4328080 None:intergenic
TCTTGTCATGAAATTGAGGT+AGG 0.553266 7:-4326849 MsG0780036177.01.T01:three_prime_UTR
ACTTGGTGTCCAACATGCAT+TGG 0.554631 7:-4327052 MsG0780036177.01.T01:CDS
CCGATGTCAGAGTAGAGACC+GGG 0.556425 7:+4331713 None:intergenic
GATGGTGGTTGGCTTGCCCT+AGG 0.557167 7:-4326035 MsG0780036177.01.T01:three_prime_UTR
GTCAACACCAACAGCAGTGT+TGG 0.558396 7:+4327113 None:intergenic
AAGAGACTTGTTGAGCCTCT+GGG 0.558634 7:+4326683 None:intergenic
ATAGCCTTCACACCAGGAGC+AGG 0.561752 7:+4328086 None:intergenic
GATCCATTGACAACATTGAA+GGG 0.562746 7:-4327030 MsG0780036177.01.T01:CDS
TTGAGGCTGGTTGAAGATGG+TGG 0.566501 7:-4326050 MsG0780036177.01.T01:three_prime_UTR
CCCGGTCTCTACTCTGACAT+CGG 0.568162 7:-4331713 MsG0780036177.01.T01:CDS
GCTATGGCTGCTAAGGGTCC+CGG 0.572243 7:-4331731 MsG0780036177.01.T01:CDS
CATAGCTTGATTCGGTGGAA+AGG 0.573865 7:+4331748 None:intergenic
CATGACTATGCTGGAGTAAG+CGG 0.575977 7:-4327847 MsG0780036177.01.T01:CDS
ACCAACAGCAGTGTTGGTCA+CGG 0.576428 7:+4327119 None:intergenic
CGAACCTGCTCCTGGTGTGA+AGG 0.577083 7:-4328090 MsG0780036177.01.T01:CDS
GCAGCCATAGCTTGATTCGG+TGG 0.579818 7:+4331743 None:intergenic
GTGGCTTTGATGGTAAGACT+TGG 0.581785 7:-4326184 MsG0780036177.01.T01:three_prime_UTR
AAGATAGATCAAAACTATCA+GGG 0.588944 7:+4326868 None:intergenic
AAGTTCCTGATCCAGCATCT+GGG 0.591599 7:-4328052 MsG0780036177.01.T01:CDS
AAAACTAGTAGAAACCAAAA+CGG 0.593066 7:+4326100 None:intergenic
GGCCATTGAAAAGAGTGCTA+AGG 0.593327 7:-4326914 MsG0780036177.01.T01:CDS
CTATGGTTGAGTGGCTATGG+AGG 0.594819 7:-4326206 MsG0780036177.01.T01:three_prime_UTR
ATTGAAAAGAGTGCTAAGGT+TGG 0.595148 7:-4326910 MsG0780036177.01.T01:CDS
TGGTGTCAAATTGTCGAGTG+TGG 0.605332 7:-4326145 MsG0780036177.01.T01:three_prime_UTR
GTGCCCTTATCCAGCACGAG+TGG 0.606194 7:-4326981 MsG0780036177.01.T01:CDS
ACCATATAAGCATTCACCTA+GGG 0.606906 7:+4326019 None:intergenic
TCCTGATCCAGCATCTGGGA+AGG 0.609354 7:-4328048 MsG0780036177.01.T01:intron
CCCGTGACCAACACTGCTGT+TGG 0.613752 7:-4327120 MsG0780036177.01.T01:CDS
CAACAGCAGTGTTGGTCACG+GGG 0.615828 7:+4327121 None:intergenic
ATTAAGAGTCTATGGTTGAG+TGG 0.623082 7:-4326215 MsG0780036177.01.T01:three_prime_UTR
TCGTATCACCAACTCAGCCA+AGG 0.624155 7:-4327007 MsG0780036177.01.T01:CDS
CTTGTGTGCAGGAATGAGAA+AGG 0.625668 7:-4327180 MsG0780036177.01.T01:intron
TCAATGGATCCAATGCATGT+TGG 0.627022 7:+4327043 None:intergenic
CCATTTCAAATGCTCACTAA+CGG 0.629784 7:+4326553 None:intergenic
AGAGAGAACAACTTCACACT+TGG 0.632696 7:-4327069 MsG0780036177.01.T01:CDS
AATTCAACTCACAACTCCAG+TGG 0.636676 7:+4331153 None:intergenic
AATCAAGCTATGGCTGCTAA+GGG 0.637442 7:-4331737 MsG0780036177.01.T01:exon
ATTCAACTCACAACTCCAGT+GGG 0.637670 7:+4331154 None:intergenic
AGTGGGTGAGTAGGTAGAGA+CGG 0.638121 7:+4331171 None:intergenic
TACCATATAAGCATTCACCT+AGG 0.644663 7:+4326018 None:intergenic
GGTGTCAAATTGTCGAGTGT+GGG 0.645924 7:-4326144 MsG0780036177.01.T01:three_prime_UTR
CTTCAAGGTCTAGTTGAATG+GGG 0.649084 7:-4325885 MsG0780036177.01.T01:three_prime_UTR
TGTGTCTACTTTGAAGTCAG+CGG 0.653058 7:+4328995 None:intergenic
GACATCGGCAAGAAAGCTAG+AGG 0.653085 7:-4331698 MsG0780036177.01.T01:intron
CACAACTCCAGTGGGTGAGT+AGG 0.656486 7:+4331162 None:intergenic
ACTGCTGTTGGTGTTGACAT+GGG 0.661896 7:-4327108 MsG0780036177.01.T01:CDS
TGTGGGTGTGATTCCAGTGG+TGG 0.668207 7:-4326127 MsG0780036177.01.T01:three_prime_UTR
TTCTACTGAGCTAGACACCA+AGG 0.676467 7:-4326935 MsG0780036177.01.T01:CDS
GAGTGTGGGTGTGATTCCAG+TGG 0.712784 7:-4326130 MsG0780036177.01.T01:three_prime_UTR
TTTCAAATGCTCACTAACGG+CGG 0.718874 7:+4326556 None:intergenic
TGTTACTCTTAAATGCCCAG+AGG 0.747944 7:-4326698 MsG0780036177.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTCGATTTTTATTTT+TGG - Chr7:4326191-4326210 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! AATAAAATAGATTTTTTTAG+AGG - Chr7:4329169-4329188 MsG0780036177.01.T01:intron 10.0%
!!! AATTTTCGATTTTTATTTTT+GGG - Chr7:4326192-4326211 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! AATTTTTTTTTTTTGTTTGT+AGG + Chr7:4327454-4327473 None:intergenic 10.0%
!!! GATTTTATGTTTTTTTTTAA+AGG - Chr7:4326618-4326637 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! TGTTTTTTTTTTTTTTTGTT+GGG - Chr7:4326290-4326309 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! TTGTTTTTTTTTTTTTTTGT+TGG - Chr7:4326289-4326308 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! TTTTTTATGAAAATTCTAAT+GGG - Chr7:4326078-4326097 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! TTTTTTTATGAAAATTCTAA+TGG - Chr7:4326077-4326096 MsG0780036177.01.T01:three_prime_UTR 10.0%
!!! TTTTTTTTATTTCATTTTCA+TGG - Chr7:4327792-4327811 MsG0780036177.01.T01:CDS 10.0%
!! ATAATCTTCAAAAGTAAATA+AGG + Chr7:4327559-4327578 None:intergenic 15.0%
!! TTATTTGAAAATGAAAGAAA+TGG - Chr7:4326664-4326683 MsG0780036177.01.T01:three_prime_UTR 15.0%
!! TTGACAAATTTATTTGATAA+AGG - Chr7:4328141-4328160 MsG0780036177.01.T01:intron 15.0%
!!! AAGTTTTGATTTTTCTTTTT+GGG - Chr7:4326053-4326072 MsG0780036177.01.T01:three_prime_UTR 15.0%
!!! ATTTACTTTTGAAGATTATT+GGG - Chr7:4327560-4327579 MsG0780036177.01.T01:intron 15.0%
!!! ATTTATGTTTTAACCATTTT+TGG - Chr7:4327163-4327182 MsG0780036177.01.T01:CDS 15.0%
!!! TATTTACTTTTGAAGATTAT+TGG - Chr7:4327559-4327578 MsG0780036177.01.T01:intron 15.0%
!!! TGTTTGATGAAATTTTTTAT+GGG - Chr7:4326340-4326359 MsG0780036177.01.T01:three_prime_UTR 15.0%
!!! TTATTGATGAATTTTGTTAT+GGG - Chr7:4326244-4326263 MsG0780036177.01.T01:three_prime_UTR 15.0%
!!! TTGTTTGATGAAATTTTTTA+TGG - Chr7:4326339-4326358 MsG0780036177.01.T01:three_prime_UTR 15.0%
!!! TTTATTGATGAATTTTGTTA+TGG - Chr7:4326243-4326262 MsG0780036177.01.T01:three_prime_UTR 15.0%
!!! TTTTAAAAATCTGTAACAAA+CGG + Chr7:4329086-4329105 None:intergenic 15.0%
!!! TTTTTGATGAAATTTGAAAT+GGG - Chr7:4326150-4326169 MsG0780036177.01.T01:three_prime_UTR 15.0%
!!! TTTTTTGATGAAATTTGAAA+TGG - Chr7:4326149-4326168 MsG0780036177.01.T01:three_prime_UTR 15.0%
!! AAATTAATATTGACACATAG+CGG - Chr7:4330043-4330062 MsG0780036177.01.T01:intron 20.0%
!! AATATGGATGTCATAAATAA+GGG + Chr7:4329413-4329432 None:intergenic 20.0%
!! AATTATTTATTGCTAAACAG+AGG + Chr7:4328465-4328484 None:intergenic 20.0%
!! ACCATGTTTAATAAATTAGA+AGG + Chr7:4331681-4331700 None:intergenic 20.0%
!! ATAAAACAATTCAATGTCAA+AGG + Chr7:4328782-4328801 None:intergenic 20.0%
!! ATATAAAACTACATTCCATT+CGG + Chr7:4326765-4326784 None:intergenic 20.0%
!! ATTAAGAGTAACAATAATCA+AGG - Chr7:4326532-4326551 MsG0780036177.01.T01:three_prime_UTR 20.0%
!! CTTAAAAAAGCTATAACAAA+CGG + Chr7:4329014-4329033 None:intergenic 20.0%
!! TAAAAAAAAACCTAAAGTGA+AGG + Chr7:4327781-4327800 None:intergenic 20.0%
!! TATTCTTTACGTATTGTAAT+TGG - Chr7:4326123-4326142 MsG0780036177.01.T01:three_prime_UTR 20.0%
!! TCCTTCTAATTTATTAAACA+TGG - Chr7:4331677-4331696 MsG0780036177.01.T01:intron 20.0%
!! TTAAAAAAGCTATAACAAAC+GGG + Chr7:4329013-4329032 None:intergenic 20.0%
!! TTTGGATACAACTATATAAA+GGG + Chr7:4329243-4329262 None:intergenic 20.0%
!!! AAACTATTTTCAAGTATAGA+AGG - Chr7:4331263-4331282 MsG0780036177.01.T01:intron 20.0%
!!! AAATTTTATTTCTAGACTTG+TGG + Chr7:4331778-4331797 None:intergenic 20.0%
!!! AACAAATAATCTAGTTTGTT+TGG + Chr7:4329261-4329280 None:intergenic 20.0%
!!! AATCAAGTTTAGTTTATACT+AGG + Chr7:4327146-4327165 None:intergenic 20.0%
!!! ATAGATTGTAGTTTTTTGTT+CGG - Chr7:4327006-4327025 MsG0780036177.01.T01:CDS 20.0%
!!! GAAGTTTTGATTTTTCTTTT+TGG - Chr7:4326052-4326071 MsG0780036177.01.T01:three_prime_UTR 20.0%
!!! GTAGTTTTGTTCTTTAAAAT+GGG - Chr7:4326892-4326911 MsG0780036177.01.T01:CDS 20.0%
!!! TAAATTTTCTTGTATGACTA+TGG - Chr7:4330979-4330998 MsG0780036177.01.T01:intron 20.0%
!!! TGGAATTTTTTGATTTTCTT+TGG - Chr7:4325958-4325977 MsG0780036177.01.T01:three_prime_UTR 20.0%
!!! TGTAGTTTTGTTCTTTAAAA+TGG - Chr7:4326891-4326910 MsG0780036177.01.T01:CDS 20.0%
!!! TGTATTTCTTTTGTTGAAAA+AGG - Chr7:4326856-4326875 MsG0780036177.01.T01:three_prime_UTR 20.0%
!!! TTTGGCTTTTTGATTTTTTT+TGG - Chr7:4325976-4325995 MsG0780036177.01.T01:three_prime_UTR 20.0%
!!! TTTTACTTATGAATGGTTAT+TGG - Chr7:4326314-4326333 MsG0780036177.01.T01:three_prime_UTR 20.0%
!!! TTTTTTATTTATTTGCCGAA+TGG - Chr7:4326747-4326766 MsG0780036177.01.T01:three_prime_UTR 20.0%
!!! TTTTTTGTTCGGATAAAAAA+TGG - Chr7:4327017-4327036 MsG0780036177.01.T01:CDS 20.0%
! AAAACTAGTAGAAACCAAAA+CGG + Chr7:4331495-4331514 None:intergenic 25.0%
! AAACAAAACAGGTATACTTA+AGG + Chr7:4330356-4330375 None:intergenic 25.0%
! AACAAAACAGGTATACTTAA+GGG + Chr7:4330355-4330374 None:intergenic 25.0%
! AAGATAGATCAAAACTATCA+GGG + Chr7:4330727-4330746 None:intergenic 25.0%
! ACAAAAACAGGTATACTTAA+GGG + Chr7:4330271-4330290 None:intergenic 25.0%
! AGGAAAAAAAATGTAGCTAT+AGG + Chr7:4331661-4331680 None:intergenic 25.0%
! AGTAGAACTATCATATGTAA+TGG + Chr7:4330019-4330038 None:intergenic 25.0%
! ATAAAATCAAAATGCAACTG+AGG + Chr7:4326606-4326625 None:intergenic 25.0%
! ATGCAACTAAAGAAACATTT+AGG + Chr7:4327070-4327089 None:intergenic 25.0%
! CACAGAAAATTATGCAAAAA+AGG + Chr7:4328066-4328085 None:intergenic 25.0%
! CGAAAACTTATGATGTAAAA+TGG + Chr7:4329582-4329601 None:intergenic 25.0%
! CTACTTGTAAAATCCAAAAA+TGG + Chr7:4327179-4327198 None:intergenic 25.0%
! GAATATGGATGTCATAAATA+AGG + Chr7:4329414-4329433 None:intergenic 25.0%
! GGAAAAAAAATGTAGCTATA+GGG + Chr7:4331660-4331679 None:intergenic 25.0%
! GTTAGAAATAAATTAGGGTT+CGG - Chr7:4325763-4325782 MsG0780036177.01.T01:three_prime_UTR 25.0%
! GTTTGGATACAACTATATAA+AGG + Chr7:4329244-4329263 None:intergenic 25.0%
! TAAAGAAACATTTAGGGAAA+AGG + Chr7:4327063-4327082 None:intergenic 25.0%
! TACAAAAACAGGTATACTTA+AGG + Chr7:4330272-4330291 None:intergenic 25.0%
! TATGTTGGATTACTACAAAA+GGG + Chr7:4331357-4331376 None:intergenic 25.0%
! TGCAACTAAAGAAACATTTA+GGG + Chr7:4327069-4327088 None:intergenic 25.0%
! TTAGAAATAAATTAGGGTTC+GGG - Chr7:4325764-4325783 MsG0780036177.01.T01:three_prime_UTR 25.0%
! TTATGTTGGATTACTACAAA+AGG + Chr7:4331358-4331377 None:intergenic 25.0%
! TTGTTGAAAAAGGATTGAAA+TGG - Chr7:4326866-4326885 MsG0780036177.01.T01:exon 25.0%
! TTTAATGTAAATGCAAAGTC+TGG - Chr7:4327224-4327243 MsG0780036177.01.T01:intron 25.0%
! TTTCTTATGATACCAAACTT+CGG - Chr7:4329848-4329867 MsG0780036177.01.T01:intron 25.0%
! TTTGTGTTGGATTATAGTAT+GGG - Chr7:4330324-4330343 MsG0780036177.01.T01:intron 25.0%
!! AGAATAGTGGAAAATTTCAA+TGG + Chr7:4331132-4331151 None:intergenic 25.0%
!! ATCTATTTTGCGTTTGTTTA+CGG + Chr7:4329305-4329324 None:intergenic 25.0%
!! TCAATCAATGGAATTTTTGT+TGG - Chr7:4325938-4325957 MsG0780036177.01.T01:three_prime_UTR 25.0%
!! TTTGCATAATTTTCTGTGTT+TGG - Chr7:4328068-4328087 MsG0780036177.01.T01:CDS 25.0%
!! TTTGTTCTGTTTTATGAAAC+AGG - Chr7:4329705-4329724 MsG0780036177.01.T01:intron 25.0%
!! TTTTGTGTTGGATTATAGTA+TGG - Chr7:4330323-4330342 MsG0780036177.01.T01:intron 25.0%
!!! AAACCTACTTTATTTCTACA+AGG + Chr7:4330862-4330881 None:intergenic 25.0%
!!! AATTTTGTTATGGGTATTGT+TGG - Chr7:4326253-4326272 MsG0780036177.01.T01:three_prime_UTR 25.0%
!!! GTTCTTTAAAATGGGAAAAA+GGG - Chr7:4326900-4326919 MsG0780036177.01.T01:CDS 25.0%
!!! GTTTTGATGAAATCTGTAAT+GGG - Chr7:4326012-4326031 MsG0780036177.01.T01:three_prime_UTR 25.0%
!!! TCATTTTAGCTATAGTTTGT+TGG - Chr7:4327721-4327740 MsG0780036177.01.T01:CDS 25.0%
!!! TGTTCTTTAAAATGGGAAAA+AGG - Chr7:4326899-4326918 MsG0780036177.01.T01:CDS 25.0%
!!! TGTTTTGATGAAATCTGTAA+TGG - Chr7:4326011-4326030 MsG0780036177.01.T01:three_prime_UTR 25.0%
!!! TTATTTTAATCCGCAACAAA+CGG - Chr7:4329386-4329405 MsG0780036177.01.T01:intron 25.0%
!!! TTTCTACTAGTTTTGATCAT+GGG - Chr7:4331501-4331520 MsG0780036177.01.T01:intron 25.0%
AAAACCACATAAACACACAA+AGG + Chr7:4326704-4326723 None:intergenic 30.0%
AAACATGGTCAAAATCTTCA+AGG - Chr7:4331692-4331711 MsG0780036177.01.T01:intron 30.0%
AAAGCGATATGAATACAATG+TGG + Chr7:4328311-4328330 None:intergenic 30.0%
AAGAAGTTATCTACTTCTGT+TGG - Chr7:4331158-4331177 MsG0780036177.01.T01:intron 30.0%
ACAATTTGACACCATTAACT+TGG + Chr7:4331441-4331460 None:intergenic 30.0%
ACGCAAAAACAAAACAAAAC+AGG + Chr7:4330367-4330386 None:intergenic 30.0%
AGGAAATCAATGCAAATTAC+AGG + Chr7:4327980-4327999 None:intergenic 30.0%
ATCTCAAGTTATTCAGACTT+AGG - Chr7:4328986-4329005 MsG0780036177.01.T01:CDS 30.0%
ATGTTTCTTTAGTTGCATGA+TGG - Chr7:4327072-4327091 MsG0780036177.01.T01:CDS 30.0%
CAAATATCAAAACGTGCTTT+AGG - Chr7:4327533-4327552 MsG0780036177.01.T01:intron 30.0%
CAACCTTGTAGAAATAAAGT+AGG - Chr7:4330856-4330875 MsG0780036177.01.T01:intron 30.0%
CAAGATAGATCAAAACTATC+AGG + Chr7:4330728-4330747 None:intergenic 30.0%
CCAACACAAAAACAAAACAT+TGG + Chr7:4330314-4330333 None:intergenic 30.0%
CCAACATAATTAAGAGTCTA+TGG - Chr7:4331369-4331388 MsG0780036177.01.T01:intron 30.0%
CCATAGACTCTTAATTATGT+TGG + Chr7:4331372-4331391 None:intergenic 30.0%
CTACATTATAAGTGCAACAA+TGG + Chr7:4327861-4327880 None:intergenic 30.0%
GAGCTAACAAAATCTAATGT+TGG - Chr7:4329871-4329890 MsG0780036177.01.T01:intron 30.0%
GTACAAAATTGCACAAATTC+AGG - Chr7:4327695-4327714 MsG0780036177.01.T01:CDS 30.0%
GTGAGAAGATTATAGGAATA+TGG + Chr7:4329429-4329448 None:intergenic 30.0%
TCTATCTTGTCATGAAATTG+AGG - Chr7:4330739-4330758 MsG0780036177.01.T01:intron 30.0%
TCTCAAGTTATTCAGACTTA+GGG - Chr7:4328987-4329006 MsG0780036177.01.T01:CDS 30.0%
TGAACAATGTGTACAAAAAC+AGG + Chr7:4330283-4330302 None:intergenic 30.0%
TGATAAGAACAGATTGACTA+GGG + Chr7:4328841-4328860 None:intergenic 30.0%
TTAATCGTTTCGGATTGTTA+TGG - Chr7:4328250-4328269 MsG0780036177.01.T01:intron 30.0%
TTCTTATGATACCAAACTTC+GGG - Chr7:4329849-4329868 MsG0780036177.01.T01:intron 30.0%
TTTCACTCTAACATGAATGT+TGG - Chr7:4329993-4330012 MsG0780036177.01.T01:intron 30.0%
TTTGCATGTAAAGGAAAAAC+CGG + Chr7:4328922-4328941 None:intergenic 30.0%
! AAACTGCAATTTTCCATGAT+CGG - Chr7:4330188-4330207 MsG0780036177.01.T01:intron 30.0%
! ACTTCTTTTTGACAGAATAG+TGG + Chr7:4331145-4331164 None:intergenic 30.0%
! ATAGAAGTTGATCTATCAAG+AGG + Chr7:4328031-4328050 None:intergenic 30.0%
! GACTAATACTTTTGATGCAA+TGG - Chr7:4331013-4331032 MsG0780036177.01.T01:intron 30.0%
! GTAGTTTTTGTTCTTCAACT+GGG + Chr7:4328576-4328595 None:intergenic 30.0%
! GTTGGGTTTTTACTTATGAA+TGG - Chr7:4326307-4326326 MsG0780036177.01.T01:three_prime_UTR 30.0%
! TACCAAAAGTACAAGAACTT+TGG + Chr7:4328951-4328970 None:intergenic 30.0%
! TAGAAGTTGATCTATCAAGA+GGG + Chr7:4328030-4328049 None:intergenic 30.0%
! TGTAGTTTTTGTTCTTCAAC+TGG + Chr7:4328577-4328596 None:intergenic 30.0%
! TTTTGTAGATCTGTTGTTCA+AGG - Chr7:4326374-4326393 MsG0780036177.01.T01:three_prime_UTR 30.0%
!! ACTCAAAGAGTATCAATTCT+CGG + Chr7:4330943-4330962 None:intergenic 30.0%
!! ACTTTTGAAGATTATTGGGT+CGG - Chr7:4327564-4327583 MsG0780036177.01.T01:intron 30.0%
!! ATTCATATCGCTTTTAAGTG+TGG - Chr7:4328317-4328336 MsG0780036177.01.T01:intron 30.0%
!! CTTGTTTCTTTTGTTTCAAC+CGG - Chr7:4328900-4328919 MsG0780036177.01.T01:intron 30.0%
!! TTAGGTTGAAGTTTACGTAA+TGG - Chr7:4328392-4328411 MsG0780036177.01.T01:intron 30.0%
!! TTGATGTTGATTCTCTTCTT+GGG - Chr7:4330792-4330811 MsG0780036177.01.T01:intron 30.0%
!! TTTATCAAAGATGACTTGCT+TGG - Chr7:4329901-4329920 MsG0780036177.01.T01:intron 30.0%
!! TTTGATGTTGATTCTCTTCT+TGG - Chr7:4330791-4330810 MsG0780036177.01.T01:intron 30.0%
!! TTTTTCAATGTGTACATCGA+AGG - Chr7:4331817-4331836 MsG0780036177.01.T01:five_prime_UTR 30.0%
!!! AATGGGTTTTGTTTGTTCAT+TGG - Chr7:4326095-4326114 MsG0780036177.01.T01:three_prime_UTR 30.0%
!!! ATGGGTTTTGTTTGTTTTGT+TGG - Chr7:4326030-4326049 MsG0780036177.01.T01:three_prime_UTR 30.0%
!!! CCAATGTTTTGTTTTTGTGT+TGG - Chr7:4330311-4330330 MsG0780036177.01.T01:intron 30.0%
!!! GATTATGTTTCTGTTGCTTT+TGG - Chr7:4326922-4326941 MsG0780036177.01.T01:CDS 30.0%
!!! GTTTCTACTAGTTTTGATCA+TGG - Chr7:4331500-4331519 MsG0780036177.01.T01:intron 30.0%
!!! GTTTTGTTTTGTTTTTGCGT+TGG - Chr7:4330367-4330386 MsG0780036177.01.T01:intron 30.0%
!!! TATTTTAATCCGCAACAAAC+GGG - Chr7:4329387-4329406 MsG0780036177.01.T01:intron 30.0%
!!! TCTCTGTATGTTGTTTTAGT+TGG - Chr7:4326796-4326815 MsG0780036177.01.T01:three_prime_UTR 30.0%
!!! TTCTACTAGTTTTGATCATG+GGG - Chr7:4331502-4331521 MsG0780036177.01.T01:intron 30.0%
AAAAACCTAAAGTGAAGGCT+AGG + Chr7:4327776-4327795 None:intergenic 35.0%
AAAACAGGTATACTTAAGGG+AGG + Chr7:4330268-4330287 None:intergenic 35.0%
AAACAGGTATACTTAAGGGA+GGG + Chr7:4330267-4330286 None:intergenic 35.0%
AAAGAAAGGTGAACTGTTTG+TGG - Chr7:4328538-4328557 MsG0780036177.01.T01:intron 35.0%
AAAGTACAAGAACTTTGGTC+TGG + Chr7:4328946-4328965 None:intergenic 35.0%
AACAAACAATTGAACAGCCA+TGG + Chr7:4329691-4329710 None:intergenic 35.0%
AACCTTATTCCATCAACAAG+TGG + Chr7:4328201-4328220 None:intergenic 35.0%
AAGAAAGGTGAACTGTTTGT+GGG - Chr7:4328539-4328558 MsG0780036177.01.T01:intron 35.0%
ACATCATCAGGTACAAAGAA+AGG - Chr7:4328524-4328543 MsG0780036177.01.T01:intron 35.0%
ACCATATAAGCATTCACCTA+GGG + Chr7:4331576-4331595 None:intergenic 35.0%
ACTTTGCAATACGAATGCTT+AGG - Chr7:4328374-4328393 MsG0780036177.01.T01:intron 35.0%
AGCATTCGTATTGCAAAGTA+TGG + Chr7:4328373-4328392 None:intergenic 35.0%
ATATAATCAAAATGCCACCG+AGG + Chr7:4326837-4326856 None:intergenic 35.0%
ATCTTCAAGGTCTAGTTGAA+TGG - Chr7:4331705-4331724 MsG0780036177.01.T01:CDS 35.0%
ATGAAATTGAGGTAGGCTTT+AGG - Chr7:4330750-4330769 MsG0780036177.01.T01:intron 35.0%
ATTAAGAGTCTATGGTTGAG+TGG - Chr7:4331377-4331396 MsG0780036177.01.T01:intron 35.0%
ATTATAAGTGCAACAATGGC+AGG + Chr7:4327857-4327876 None:intergenic 35.0%
CAAAGTAGAGTGTAGTTCAA+CGG - Chr7:4327383-4327402 MsG0780036177.01.T01:intron 35.0%
CACTTCAGTGAGAAGATTAT+AGG + Chr7:4329436-4329455 None:intergenic 35.0%
CCATTTCAAATGCTCACTAA+CGG + Chr7:4331042-4331061 None:intergenic 35.0%
CTTGGGTAAAGAAATGTTCA+AGG - Chr7:4330809-4330828 MsG0780036177.01.T01:intron 35.0%
GAATGCTTATATGGTAGCTT+TGG - Chr7:4331581-4331600 MsG0780036177.01.T01:intron 35.0%
GATCCATTGACAACATTGAA+GGG - Chr7:4330562-4330581 MsG0780036177.01.T01:intron 35.0%
GCATTCGTATTGCAAAGTAT+GGG + Chr7:4328372-4328391 None:intergenic 35.0%
GGGCATTTAAGAGTAACATT+TGG + Chr7:4330892-4330911 None:intergenic 35.0%
GTATGCGTGTTTAATCGTTT+CGG - Chr7:4328240-4328259 MsG0780036177.01.T01:intron 35.0%
GTATGCTATTACTGTATGCA+AGG - Chr7:4327281-4327300 MsG0780036177.01.T01:intron 35.0%
GTGATAAGAACAGATTGACT+AGG + Chr7:4328842-4328861 None:intergenic 35.0%
TACCATATAAGCATTCACCT+AGG + Chr7:4331577-4331596 None:intergenic 35.0%
TAGTTTGACAATTCTGTACG+AGG + Chr7:4328673-4328692 None:intergenic 35.0%
TATTGCAAAGTATGGGATAC+AGG + Chr7:4328365-4328384 None:intergenic 35.0%
TCTCTTTCTCTCTCAATCAA+TGG - Chr7:4325926-4325945 MsG0780036177.01.T01:three_prime_UTR 35.0%
TCTTCAAGGTCTAGTTGAAT+GGG - Chr7:4331706-4331725 MsG0780036177.01.T01:CDS 35.0%
TCTTGTCATGAAATTGAGGT+AGG - Chr7:4330743-4330762 MsG0780036177.01.T01:intron 35.0%
TGCTGTATTTGAACTCTTGT+TGG - Chr7:4331089-4331108 MsG0780036177.01.T01:intron 35.0%
TGTTCCTTTGTGTGTTTATG+TGG - Chr7:4326697-4326716 MsG0780036177.01.T01:three_prime_UTR 35.0%
! AAATTACAGGAAGCGCAAAA+AGG + Chr7:4327967-4327986 None:intergenic 35.0%
! AACCTTAGCACTCTTTTCAA+TGG + Chr7:4330683-4330702 None:intergenic 35.0%
! ACCCTTAAGAGTGTGTTTAT+CGG - Chr7:4328720-4328739 MsG0780036177.01.T01:intron 35.0%
! ATTCTATTTGATTTCCCAGC+AGG - Chr7:4327881-4327900 MsG0780036177.01.T01:intron 35.0%
! GAAATGGTGATGAGTGATTT+AGG + Chr7:4330640-4330659 None:intergenic 35.0%
! GACCAAAGTTCTTGTACTTT+TGG - Chr7:4328946-4328965 MsG0780036177.01.T01:intron 35.0%
! GTCAACTTATCTGGTGTTTT+TGG - Chr7:4329796-4329815 MsG0780036177.01.T01:intron 35.0%
! GTTCTGTTTTATGAAACAGG+TGG - Chr7:4329708-4329727 MsG0780036177.01.T01:intron 35.0%
! GTTTATTGTCCACTTGTTGA+TGG - Chr7:4328189-4328208 MsG0780036177.01.T01:intron 35.0%
! TTCTATTTGATTTCCCAGCA+GGG - Chr7:4327882-4327901 MsG0780036177.01.T01:intron 35.0%
! TTGTGCAATTTTGTACTGCA+AGG + Chr7:4327691-4327710 None:intergenic 35.0%
!! ATTGAAAAGAGTGCTAAGGT+TGG - Chr7:4330682-4330701 MsG0780036177.01.T01:intron 35.0%
!! GCTTCATAGACATTTGTTGT+TGG - Chr7:4328095-4328114 MsG0780036177.01.T01:CDS 35.0%
!! GCTTTTGGTGATTGATCTTT+GGG - Chr7:4328003-4328022 MsG0780036177.01.T01:intron 35.0%
!!! CATTGATTTCCTTTCGCTTT+TGG - Chr7:4327988-4328007 MsG0780036177.01.T01:intron 35.0%
AAACCTAGTGCCAAAATGGT+AGG + Chr7:4327922-4327941 None:intergenic 40.0%
AACCCAGTTGTCAACTTATC+TGG - Chr7:4329787-4329806 MsG0780036177.01.T01:intron 40.0%
AATCAAGCTATGGCTGCTAA+GGG - Chr7:4325855-4325874 MsG0780036177.01.T01:three_prime_UTR 40.0%
AATTCAACTCACAACTCCAG+TGG + Chr7:4326442-4326461 None:intergenic 40.0%
ACTAATGCTCTTGCATTTGG+TGG - Chr7:4329820-4329839 MsG0780036177.01.T01:intron 40.0%
AGACACTGTCTTCATTGTAG+CGG - Chr7:4328285-4328304 MsG0780036177.01.T01:intron 40.0%
AGAGAGAACAACTTCACACT+TGG - Chr7:4330523-4330542 MsG0780036177.01.T01:intron 40.0%
AGCCGATAAACACACTCTTA+AGG + Chr7:4328725-4328744 None:intergenic 40.0%
AGTAGCTAGAGTGAGAACAT+TGG - Chr7:4327357-4327376 MsG0780036177.01.T01:intron 40.0%
ATGTGCATTATTGCCGATCA+TGG + Chr7:4330204-4330223 None:intergenic 40.0%
ATTCAACTCACAACTCCAGT+GGG + Chr7:4326441-4326460 None:intergenic 40.0%
CAAAGTATGGGATACAGGTT+AGG + Chr7:4328360-4328379 None:intergenic 40.0%
CAATACTTGCATGACTATGC+TGG - Chr7:4329736-4329755 MsG0780036177.01.T01:intron 40.0%
CAGTGATAGTTGTGAAAAGC+TGG + Chr7:4329478-4329497 None:intergenic 40.0%
CCGTTAGTGAGCATTTGAAA+TGG - Chr7:4331039-4331058 MsG0780036177.01.T01:intron 40.0%
CTATTACTGTATGCAAGGTC+TGG - Chr7:4327286-4327305 MsG0780036177.01.T01:intron 40.0%
CTTATAATAGCCTTCACACC+AGG + Chr7:4329515-4329534 None:intergenic 40.0%
CTTCAAGGTCTAGTTGAATG+GGG - Chr7:4331707-4331726 MsG0780036177.01.T01:CDS 40.0%
GATAAACACACTCTTAAGGG+TGG + Chr7:4328721-4328740 None:intergenic 40.0%
GATCAATCACCAAAAGCGAA+AGG + Chr7:4328000-4328019 None:intergenic 40.0%
GCCGATAAACACACTCTTAA+GGG + Chr7:4328724-4328743 None:intergenic 40.0%
GCTTCAAATGAGAAGCTGTT+AGG - Chr7:4329136-4329155 MsG0780036177.01.T01:intron 40.0%
GGAACTAATGCTCTTGCATT+TGG - Chr7:4329817-4329836 MsG0780036177.01.T01:intron 40.0%
GGATACAGGTTAGGAACATA+AGG + Chr7:4328351-4328370 None:intergenic 40.0%
GGATCCATTGACAACATTGA+AGG - Chr7:4330561-4330580 MsG0780036177.01.T01:intron 40.0%
GTCACTAAAGTCCTTGCTTT+CGG - Chr7:4327428-4327447 MsG0780036177.01.T01:intron 40.0%
TATGAATTGCTCTTGTGTGC+AGG - Chr7:4330401-4330420 MsG0780036177.01.T01:intron 40.0%
TATGCTGTTACTGTGAAGTC+TGG - Chr7:4327253-4327272 MsG0780036177.01.T01:intron 40.0%
TCAATGGATCCAATGCATGT+TGG + Chr7:4330552-4330571 None:intergenic 40.0%
TGCAAAACCTAGTGCCAAAA+TGG + Chr7:4327926-4327945 None:intergenic 40.0%
TGCTAAGGTTGGATTGAGTT+TGG - Chr7:4330693-4330712 MsG0780036177.01.T01:intron 40.0%
TGCTTGTGTACTCTGCATAT+AGG - Chr7:4327629-4327648 MsG0780036177.01.T01:intron 40.0%
TGTTACTCTTAAATGCCCAG+AGG - Chr7:4330894-4330913 MsG0780036177.01.T01:intron 40.0%
TTAGATGCGTTCAGAACAGA+GGG + Chr7:4327819-4327838 None:intergenic 40.0%
TTAGCAGCCATAGCTTGATT+CGG + Chr7:4325855-4325874 None:intergenic 40.0%
TTGGATAGCTGCCAAGTTAA+TGG - Chr7:4331427-4331446 MsG0780036177.01.T01:intron 40.0%
TTTCAAATGCTCACTAACGG+CGG + Chr7:4331039-4331058 None:intergenic 40.0%
! ACACCAGATAAGTTGACAAC+TGG + Chr7:4329793-4329812 None:intergenic 40.0%
! CACCAGATAAGTTGACAACT+GGG + Chr7:4329792-4329811 None:intergenic 40.0%
! GCATGATGGAAATGAGATAC+TGG - Chr7:4327086-4327105 MsG0780036177.01.T01:CDS 40.0%
! GTCCACTTGTTGATGGAATA+AGG - Chr7:4328196-4328215 MsG0780036177.01.T01:intron 40.0%
! TTTTGTTAGCTCCCGAAGTT+TGG + Chr7:4329863-4329882 None:intergenic 40.0%
!! CGCTTTTGGTGATTGATCTT+TGG - Chr7:4328002-4328021 MsG0780036177.01.T01:intron 40.0%
!! TGTGTCTACTTTGAAGTCAG+CGG + Chr7:4328600-4328619 None:intergenic 40.0%
!!! TGCTCTGTTTTAGAGTGATC+TGG - Chr7:4327606-4327625 MsG0780036177.01.T01:intron 40.0%
!!! TGGTCTGGTTTTGCATGTAA+AGG + Chr7:4328931-4328950 None:intergenic 40.0%
AAAATGGTAGGCAGGGGAAA+AGG + Chr7:4327910-4327929 None:intergenic 45.0%
AAAGTTCCTGATCCAGCATC+TGG - Chr7:4329539-4329558 MsG0780036177.01.T01:intron 45.0%
AAATGGTAGGCAGGGGAAAA+GGG + Chr7:4327909-4327928 None:intergenic 45.0%
AAGTTCCTGATCCAGCATCT+GGG - Chr7:4329540-4329559 MsG0780036177.01.T01:intron 45.0%
ACTTTAGTGACTTTGCCCTG+GGG + Chr7:4327419-4327438 None:intergenic 45.0%
AGAGTGTAGTTCAACGGATC+AGG - Chr7:4327389-4327408 MsG0780036177.01.T01:intron 45.0%
AGGTAGAGACGGTAAACTTC+TGG + Chr7:4326413-4326432 None:intergenic 45.0%
AGTCTATGGTTGAGTGGCTA+TGG - Chr7:4331383-4331402 MsG0780036177.01.T01:intron 45.0%
CGACCCTTCAATGTTGTCAA+TGG + Chr7:4330568-4330587 None:intergenic 45.0%
CTACAGGCTATCACATCATC+AGG - Chr7:4328512-4328531 MsG0780036177.01.T01:intron 45.0%
CTCACTGTGTATTGTGCTAC+AGG - Chr7:4328496-4328515 MsG0780036177.01.T01:intron 45.0%
CTTGTGTGCAGGAATGAGAA+AGG - Chr7:4330412-4330431 MsG0780036177.01.T01:intron 45.0%
CTTTCCACCGAATCAAGCTA+TGG - Chr7:4325845-4325864 MsG0780036177.01.T01:three_prime_UTR 45.0%
GAATCAAGCTATGGCTGCTA+AGG - Chr7:4325854-4325873 MsG0780036177.01.T01:three_prime_UTR 45.0%
GACTTTAGTGACTTTGCCCT+GGG + Chr7:4327420-4327439 None:intergenic 45.0%
GAGTGTAGTTCAACGGATCA+GGG - Chr7:4327390-4327409 MsG0780036177.01.T01:intron 45.0%
GATCTCTTCCTCTTACTCCA+TGG - Chr7:4329671-4329690 MsG0780036177.01.T01:intron 45.0%
GCCCTAGGTGAATGCTTATA+TGG - Chr7:4331572-4331591 MsG0780036177.01.T01:intron 45.0%
GGAAGATTTGTGTGCTTCCT+CGG - Chr7:4326817-4326836 MsG0780036177.01.T01:three_prime_UTR 45.0%
GGTGTCAAATTGTCGAGTGT+GGG - Chr7:4331448-4331467 MsG0780036177.01.T01:intron 45.0%
GTTAGATGCGTTCAGAACAG+AGG + Chr7:4327820-4327839 None:intergenic 45.0%
TAGATGCGTTCAGAACAGAG+GGG + Chr7:4327818-4327837 None:intergenic 45.0%
TAGTGCCAAAATGGTAGGCA+GGG + Chr7:4327917-4327936 None:intergenic 45.0%
TATCTTACCTTCCCAGATGC+TGG + Chr7:4329554-4329573 None:intergenic 45.0%
TCGCATTAGATAGCATGTCG+CGG + Chr7:4330117-4330136 None:intergenic 45.0%
TTCTACTGAGCTAGACACCA+AGG - Chr7:4330657-4330676 MsG0780036177.01.T01:intron 45.0%
TTGAACAGCCATGGAGTAAG+AGG + Chr7:4329682-4329701 None:intergenic 45.0%
TTGTTTGTAGGCCGAAAGCA+AGG + Chr7:4327442-4327461 None:intergenic 45.0%
! AAATAAGGGCCCGTTTGTTG+CGG + Chr7:4329399-4329418 None:intergenic 45.0%
! AGCACTCTTTTCAATGGCCT+TGG + Chr7:4330677-4330696 None:intergenic 45.0%
! GGTGTCTAGCTCAGTAGAAA+TGG + Chr7:4330656-4330675 None:intergenic 45.0%
! TCATTGAGGCTGGTTGAAGA+TGG - Chr7:4331539-4331558 MsG0780036177.01.T01:intron 45.0%
! TGGTGTCAAATTGTCGAGTG+TGG - Chr7:4331447-4331466 MsG0780036177.01.T01:intron 45.0%
! TTTTCCCCTGCCTACCATTT+TGG - Chr7:4327909-4327928 MsG0780036177.01.T01:intron 45.0%
!! AAAGAGACTTGTTGAGCCTC+TGG + Chr7:4330913-4330932 None:intergenic 45.0%
!! AAGAGACTTGTTGAGCCTCT+GGG + Chr7:4330912-4330931 None:intergenic 45.0%
!! ACTGCTGTTGGTGTTGACAT+GGG - Chr7:4330484-4330503 MsG0780036177.01.T01:intron 45.0%
!! ACTTGGTGTCCAACATGCAT+TGG - Chr7:4330540-4330559 MsG0780036177.01.T01:intron 45.0%
!! CACTCTAAAACAGAGCACCT+GGG + Chr7:4327603-4327622 None:intergenic 45.0%
!! CATAGCTTGATTCGGTGGAA+AGG + Chr7:4325847-4325866 None:intergenic 45.0%
!! GGCCATTGAAAAGAGTGCTA+AGG - Chr7:4330678-4330697 MsG0780036177.01.T01:intron 45.0%
!! GTGGCTTTGATGGTAAGACT+TGG - Chr7:4331408-4331427 MsG0780036177.01.T01:intron 45.0%
!! TCACTCTAAAACAGAGCACC+TGG + Chr7:4327604-4327623 None:intergenic 45.0%
!! TGCGAAGTGTTGTCAAACAG+AGG - Chr7:4330132-4330151 MsG0780036177.01.T01:intron 45.0%
!!! TAGTTTTGATCATGGGGTGC+AGG - Chr7:4331508-4331527 MsG0780036177.01.T01:intron 45.0%
AGATTTGTGTGCTTCCTCGG+TGG - Chr7:4326820-4326839 MsG0780036177.01.T01:three_prime_UTR 50.0%
AGTGCCAAAATGGTAGGCAG+GGG + Chr7:4327916-4327935 None:intergenic 50.0%
AGTGGGTGAGTAGGTAGAGA+CGG + Chr7:4326424-4326443 None:intergenic 50.0%
CCAAAACGGTTAACCACCAC+TGG + Chr7:4331481-4331500 None:intergenic 50.0%
CTAGTGCCAAAATGGTAGGC+AGG + Chr7:4327918-4327937 None:intergenic 50.0%
CTATGGTTGAGTGGCTATGG+AGG - Chr7:4331386-4331405 MsG0780036177.01.T01:intron 50.0%
GAACGCATCTAACTTCCCCT+TGG - Chr7:4327827-4327846 MsG0780036177.01.T01:CDS 50.0%
GACATCGGCAAGAAAGCTAG+AGG - Chr7:4325894-4325913 MsG0780036177.01.T01:three_prime_UTR 50.0%
GGACTTTAGTGACTTTGCCC+TGG + Chr7:4327421-4327440 None:intergenic 50.0%
GTCAACACCAACAGCAGTGT+TGG + Chr7:4330482-4330501 None:intergenic 50.0%
TCGTATCACCAACTCAGCCA+AGG - Chr7:4330585-4330604 MsG0780036177.01.T01:intron 50.0%
TTTGATCATGGGGTGCAGGT+TGG - Chr7:4331512-4331531 MsG0780036177.01.T01:intron 50.0%
! CCAGTGGTGGTTAACCGTTT+TGG - Chr7:4331478-4331497 MsG0780036177.01.T01:intron 50.0%
! GCTAGCCTAGCCTTCACTTT+AGG - Chr7:4327768-4327787 MsG0780036177.01.T01:CDS 50.0%
! TTGAGGCTGGTTGAAGATGG+TGG - Chr7:4331542-4331561 MsG0780036177.01.T01:intron 50.0%
!! ACCAACAGCAGTGTTGGTCA+CGG + Chr7:4330476-4330495 None:intergenic 50.0%
!! AGGAAGCGCAAAAAGGCATC+AGG + Chr7:4327960-4327979 None:intergenic 50.0%
!! CACTGCTGTTGGTGTTGACA+TGG - Chr7:4330483-4330502 MsG0780036177.01.T01:intron 50.0%
!! CTGCCTACCATTTTGGCACT+AGG - Chr7:4327916-4327935 MsG0780036177.01.T01:intron 50.0%
!! GGAAGCGCAAAAAGGCATCA+GGG + Chr7:4327959-4327978 None:intergenic 50.0%
!! TGCAGGTTGGTGGTTCATTG+AGG - Chr7:4331525-4331544 MsG0780036177.01.T01:intron 50.0%
!!! GCTTTTGGTGCTTTGCTGTG+AGG - Chr7:4326937-4326956 MsG0780036177.01.T01:CDS 50.0%
AACAATGGCAGGCGAGCCAA+GGG + Chr7:4327846-4327865 None:intergenic 55.0%
ACCTTCCCAGATGCTGGATC+AGG + Chr7:4329548-4329567 None:intergenic 55.0%
ACGCCACTCGTGCTGGATAA+GGG + Chr7:4330617-4330636 None:intergenic 55.0%
ATAGCCTTCACACCAGGAGC+AGG + Chr7:4329509-4329528 None:intergenic 55.0%
CACAACTCCAGTGGGTGAGT+AGG + Chr7:4326433-4326452 None:intergenic 55.0%
CCCGGTCTCTACTCTGACAT+CGG - Chr7:4325879-4325898 MsG0780036177.01.T01:three_prime_UTR 55.0%
CCGATGTCAGAGTAGAGACC+GGG + Chr7:4325882-4325901 None:intergenic 55.0%
CTTCACACCAGGAGCAGGTT+CGG + Chr7:4329504-4329523 None:intergenic 55.0%
GAGTGTGGGTGTGATTCCAG+TGG - Chr7:4331462-4331481 MsG0780036177.01.T01:intron 55.0%
GCCGATGTCAGAGTAGAGAC+CGG + Chr7:4325883-4325902 None:intergenic 55.0%
GTCTCTACCTACTCACCCAC+TGG - Chr7:4326423-4326442 MsG0780036177.01.T01:three_prime_UTR 55.0%
TCCTGATCCAGCATCTGGGA+AGG - Chr7:4329544-4329563 MsG0780036177.01.T01:intron 55.0%
TGGTTGAGTGGCTATGGAGG+TGG - Chr7:4331389-4331408 MsG0780036177.01.T01:intron 55.0%
TGTGGGTGTGATTCCAGTGG+TGG - Chr7:4331465-4331484 MsG0780036177.01.T01:intron 55.0%
TTAGTGACTTTGCCCTGGGG+TGG + Chr7:4327416-4327435 None:intergenic 55.0%
TTATTGGGTCGGCCCTGCAA+CGG - Chr7:4327575-4327594 MsG0780036177.01.T01:intron 55.0%
! ATTTAGGACGCCACTCGTGC+TGG + Chr7:4330624-4330643 None:intergenic 55.0%
! GGCTGGTTGAAGATGGTGGT+TGG - Chr7:4331546-4331565 MsG0780036177.01.T01:intron 55.0%
!! CAACAGCAGTGTTGGTCACG+GGG + Chr7:4330474-4330493 None:intergenic 55.0%
!! CCAACAGCAGTGTTGGTCAC+GGG + Chr7:4330475-4330494 None:intergenic 55.0%
!! CTGGATAAGGGCACTTGCCT+TGG + Chr7:4330605-4330624 None:intergenic 55.0%
!! GCAGCCATAGCTTGATTCGG+TGG + Chr7:4325852-4325871 None:intergenic 55.0%
!! GGCTATGGAGGTGGCTTTGA+TGG - Chr7:4331398-4331417 MsG0780036177.01.T01:intron 55.0%
!! GGTTGGTGGTTCATTGAGGC+TGG - Chr7:4331529-4331548 MsG0780036177.01.T01:intron 55.0%
ACAATGGCAGGCGAGCCAAG+GGG + Chr7:4327845-4327864 None:intergenic 60.0%
ACTGTCACCGAACCTGCTCC+TGG - Chr7:4329494-4329513 MsG0780036177.01.T01:intron 60.0%
AGCACCTGGGATCCGTTGCA+GGG + Chr7:4327590-4327609 None:intergenic 60.0%
AGGGGAAAAGGGACCCTGCT+GGG + Chr7:4327898-4327917 None:intergenic 60.0%
CAACAATGGCAGGCGAGCCA+AGG + Chr7:4327847-4327866 None:intergenic 60.0%
CCCGTGACCAACACTGCTGT+TGG - Chr7:4330472-4330491 MsG0780036177.01.T01:intron 60.0%
CGAACCTGCTCCTGGTGTGA+AGG - Chr7:4329502-4329521 MsG0780036177.01.T01:intron 60.0%
GACGCCACTCGTGCTGGATA+AGG + Chr7:4330618-4330637 None:intergenic 60.0%
GCTATGGCTGCTAAGGGTCC+CGG - Chr7:4325861-4325880 MsG0780036177.01.T01:three_prime_UTR 60.0%
GGCACTTGCCTTGGCTGAGT+TGG + Chr7:4330596-4330615 None:intergenic 60.0%
GTGCCCTTATCCAGCACGAG+TGG - Chr7:4330611-4330630 MsG0780036177.01.T01:intron 60.0%
! GATCATGGGGTGCAGGTTGG+TGG - Chr7:4331515-4331534 MsG0780036177.01.T01:intron 60.0%
!! GATGGTGGTTGGCTTGCCCT+AGG - Chr7:4331557-4331576 MsG0780036177.01.T01:intron 60.0%
AACGGATCAGGGCCACCCCA+GGG - Chr7:4327401-4327420 MsG0780036177.01.T01:intron 65.0%
CAGGGGAAAAGGGACCCTGC+TGG + Chr7:4327899-4327918 None:intergenic 65.0%
GAGCACCTGGGATCCGTTGC+AGG + Chr7:4327591-4327610 None:intergenic 65.0%
CAACGGATCAGGGCCACCCC+AGG - Chr7:4327400-4327419 MsG0780036177.01.T01:intron 70.0%
TCGGCCCTGCAACGGATCCC+AGG - Chr7:4327583-4327602 MsG0780036177.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 4325762 4331852 4325762 ID=MsG0780036177.01;Name=MsG0780036177.01
Chr7 mRNA 4325762 4331852 4325762 ID=MsG0780036177.01.T01;Parent=MsG0780036177.01;Name=MsG0780036177.01.T01;_AED=0.33;_eAED=0.33;_QI=102|1|1|1|1|1|6|1123|277
Chr7 exon 4325762 4327191 4325762 ID=MsG0780036177.01.T01:exon:2461;Parent=MsG0780036177.01.T01
Chr7 exon 4327679 4327887 4327679 ID=MsG0780036177.01.T01:exon:2460;Parent=MsG0780036177.01.T01
Chr7 exon 4328049 4328135 4328049 ID=MsG0780036177.01.T01:exon:2459;Parent=MsG0780036177.01.T01
Chr7 exon 4328986 4329096 4328986 ID=MsG0780036177.01.T01:exon:2458;Parent=MsG0780036177.01.T01
Chr7 exon 4331165 4331232 4331165 ID=MsG0780036177.01.T01:exon:2457;Parent=MsG0780036177.01.T01
Chr7 exon 4331699 4331852 4331699 ID=MsG0780036177.01.T01:exon:2456;Parent=MsG0780036177.01.T01
Chr7 five_prime_UTR 4331751 4331852 4331751 ID=MsG0780036177.01.T01:five_prime_utr;Parent=MsG0780036177.01.T01
Chr7 CDS 4331699 4331750 4331699 ID=MsG0780036177.01.T01:cds;Parent=MsG0780036177.01.T01
Chr7 CDS 4331165 4331232 4331165 ID=MsG0780036177.01.T01:cds;Parent=MsG0780036177.01.T01
Chr7 CDS 4328986 4329096 4328986 ID=MsG0780036177.01.T01:cds;Parent=MsG0780036177.01.T01
Chr7 CDS 4328049 4328135 4328049 ID=MsG0780036177.01.T01:cds;Parent=MsG0780036177.01.T01
Chr7 CDS 4327679 4327887 4327679 ID=MsG0780036177.01.T01:cds;Parent=MsG0780036177.01.T01
Chr7 CDS 4326885 4327191 4326885 ID=MsG0780036177.01.T01:cds;Parent=MsG0780036177.01.T01
Chr7 three_prime_UTR 4325762 4326884 4325762 ID=MsG0780036177.01.T01:three_prime_utr;Parent=MsG0780036177.01.T01
Gene Sequence

>MsG0780036177.01.T01

ATGGCTGCTAAGGGTCCCGGTCTCTACTCTGACATCGGCAAGAAAGCTAGAGATCTGTTGTTCAAGGACTACAACAGTGACCAGAAGTTTACCGTCTCTACCTACTCACCCACTGGAGTTGCTATCACATCATCAGGTACAAAGAAAGGTGAACTGTTTGTGGGCGATGTTAATACCCAGTTGAAGAACAAAAACTACACCGCTGACTTCAAAGTAGACACAGAGTCTAATCTTTTCACAACTATCACTGTCACCGAACCTGCTCCTGGTGTGAAGGCTATTATAAGCTGCAAAGTTCCTGATCCAGCATCTGGGAAGGTGGAACTACAATACTTGCATGACTATGCTGGAGTAAGCGGCAACATTGGGTTGAAAGCAAACCCAGTTGTCAACTTATCTGGTGTTTTTGGAACTAATGCTCTTGCATTTGGTGGTGATATTTCTTATGATACCAAACTTCGGGAGCTAACAAAATCTAATGTTGGAGTGAGCTTTATCAAAGATGACTTGCTTGGAGCATTGACTCTGAATGAGAAAGGTGATGTGCTGAATGCTTCATACTATCATGTTATTAACCCCGTGACCAACACTGCTGTTGGTGTTGACATGGGTCACAGATTCTCAACTAGAGAGAACAACTTCACACTTGGTGTCCAACATGCATTGGATCCATTGACAACATTGAAGGGTCGTATCACCAACTCAGCCAAGGCAAGTGCCCTTATCCAGCACGAGTGGCGTCCTAAATCACTCATCACCATTTCTACTGAGCTAGACACCAAGGCCATTGAAAAGAGTGCTAAGGTTGGATTGAGTTTGGTTCTCAAACCCTGA

Protein sequence

>MsG0780036177.01.T01

MAAKGPGLYSDIGKKARDLLFKDYNSDQKFTVSTYSPTGVAITSSGTKKGELFVGDVNTQLKNKNYTADFKVDTESNLFTTITVTEPAPGVKAIISCKVPDPASGKVELQYLHDYAGVSGNIGLKANPVVNLSGVFGTNALAFGGDISYDTKLRELTKSNVGVSFIKDDLLGALTLNEKGDVLNASYYHVINPVTNTAVGVDMGHRFSTRENNFTLGVQHALDPLTTLKGRITNSAKASALIQHEWRPKSLITISTELDTKAIEKSAKVGLSLVLKP*