AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025241.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025241.01.T01 MTR_5g025160 54.305 453 28 6 1 274 107 559 1.27e-137 400
MsG0580025241.01.T01 MTR_4g134590 34.483 145 70 3 54 173 148 292 2.06e-16 79.0
MsG0580025241.01.T01 MTR_7g058500 29.801 151 82 2 55 181 143 293 1.33e-15 76.6
MsG0580025241.01.T01 MTR_4g077650 33.103 145 72 3 54 173 136 280 2.30e-15 75.9
MsG0580025241.01.T01 MTR_7g096920 29.487 156 87 2 44 177 74 228 1.87e-14 73.2
MsG0580025241.01.T01 MTR_5g044720 30.667 150 80 2 45 170 411 560 2.73e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025241.01.T01 AT3G45890 44.237 321 65 3 1 207 131 451 3.63e-63 209
MsG0580025241.01.T01 AT3G45890 67.647 68 22 0 207 274 510 577 2.99e-25 105
MsG0580025241.01.T01 AT5G49820 34.965 143 70 3 54 173 143 285 3.64e-15 75.5
MsG0580025241.01.T01 AT2G31190 26.752 157 92 2 44 178 92 247 7.83e-13 68.6
MsG0580025241.01.T01 AT2G31190 26.752 157 92 2 44 178 91 246 8.04e-13 68.6
MsG0580025241.01.T01 AT1G13770 27.273 154 88 2 45 174 79 232 4.68e-12 66.2
MsG0580025241.01.T01 AT1G13770 27.273 154 88 2 45 174 79 232 8.84e-12 65.1
MsG0580025241.01.T01 AT1G13770 27.273 154 88 2 45 174 79 232 1.82e-11 63.9
MsG0580025241.01.T01 AT2G23470 28.906 128 67 2 55 158 151 278 7.13e-11 62.8

Find 76 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACCTTTGACTTCGTAAA+TGG 0.164001 5:-15773241 None:intergenic
TGCAAAAGGTGCATTTAATA+TGG 0.174409 5:-15776697 None:intergenic
AAAATATCTTTCAAATTATC+AGG 0.191039 5:-15773282 None:intergenic
TTCAGGTCAACTATCTTTAT+TGG 0.200578 5:+15778379 MsG0580025241.01.T01:CDS
ATCGGCTGCTTCTTTGATTC+AGG 0.226402 5:+15773771 MsG0580025241.01.T01:CDS
TTGCTTTATGCTGTTGGATT+AGG 0.232540 5:+15773521 MsG0580025241.01.T01:CDS
CCTCATTTGTTTGTGCCTAT+TGG 0.241923 5:+15773727 MsG0580025241.01.T01:CDS
TATGCTCAAGGCATTGTTTC+AGG 0.243254 5:+15778362 MsG0580025241.01.T01:CDS
CTACTGCTGCTGCTATTAAT+TGG 0.262380 5:+15773558 MsG0580025241.01.T01:CDS
CTTCTTGAAAATGCCGCGTT+TGG 0.270026 5:+15773679 MsG0580025241.01.T01:CDS
GGAATGGTCAGCAGGTTTAT+TGG 0.296149 5:+15775066 MsG0580025241.01.T01:CDS
ACTAGGAGTTGTTTCTTTGC+CGG 0.301778 5:+15774791 MsG0580025241.01.T01:CDS
CACCAGGTTTGCAGTCATAA+AGG 0.314449 5:-15778437 None:intergenic
TGCTTTATGCTGTTGGATTA+GGG 0.315617 5:+15773522 MsG0580025241.01.T01:CDS
TGTTCAAGGTGTTGCTTGTC+AGG 0.357220 5:+15773472 MsG0580025241.01.T01:CDS
TACTGCTGCTGCTATTAATT+GGG 0.368534 5:+15773559 MsG0580025241.01.T01:CDS
TCGGCATTGACCTCTTTAAC+TGG 0.376774 5:-15776651 None:intergenic
ACCAGGTTTGCAGTCATAAA+GGG 0.382621 5:-15778436 None:intergenic
TTCAATCATGTTAGAGATGA+TGG 0.385348 5:+15778498 MsG0580025241.01.T01:CDS
GCAAAAGGTGCATTTAATAT+GGG 0.389414 5:-15776696 None:intergenic
CAAGCTTTGCTTTATGCTGT+TGG 0.395995 5:+15773515 MsG0580025241.01.T01:CDS
CAACTCACTTTGTTTGCAAA+AGG 0.397360 5:-15776711 None:intergenic
TTCTTGAAAATGCCGCGTTT+GGG 0.406635 5:+15773680 MsG0580025241.01.T01:CDS
CCACCTTTGACTTCGTAAAT+GGG 0.418270 5:-15773240 None:intergenic
GTCAGCAGGTTTATTGGTAT+CGG 0.418772 5:+15775072 MsG0580025241.01.T01:CDS
AGGTTTATTGGTATCGGGCT+TGG 0.420034 5:+15775078 MsG0580025241.01.T01:CDS
ATTCCTTTGAGCAGCGAAAC+CGG 0.423226 5:-15774810 None:intergenic
TTTGACTTCGTAAATGGGTT+GGG 0.442902 5:-15773235 None:intergenic
TAAAGAAACTTGTTCACAGC+TGG 0.446726 5:+15778338 MsG0580025241.01.T01:CDS
GAGAAGAACGCAGGAATTGA+AGG 0.449777 5:+15778405 MsG0580025241.01.T01:CDS
ATCTCTAGAATATGCGGAAA+GGG 0.452770 5:+15778473 MsG0580025241.01.T01:CDS
ATGCTGTTGGATTAGGGAAA+GGG 0.454870 5:+15773528 MsG0580025241.01.T01:CDS
GCACCAGCAAAAGCACCAAT+AGG 0.457783 5:-15773742 None:intergenic
GCATTTAATATGGGTACTGC+TGG 0.463288 5:-15776687 None:intergenic
TGGGTGCTGAAAGATGGAAT+TGG 0.464732 5:+15773578 MsG0580025241.01.T01:CDS
CTTTGACTTCGTAAATGGGT+TGG 0.467330 5:-15773236 None:intergenic
TCAGCAGGTTTATTGGTATC+GGG 0.474154 5:+15775073 MsG0580025241.01.T01:CDS
TCAAAGGTGGAAACTTGATT+AGG 0.475423 5:+15773253 MsG0580025241.01.T01:CDS
ACCCTTTATGACTGCAAACC+TGG 0.478263 5:+15778435 MsG0580025241.01.T01:CDS
CCTCTTTAACTGGAGGAGCC+TGG 0.481223 5:-15776641 None:intergenic
GGGTGCTGAAAGATGGAATT+GGG 0.488890 5:+15773579 MsG0580025241.01.T01:CDS
TCATTATGGAGAGGTGTTCA+AGG 0.490357 5:+15773458 MsG0580025241.01.T01:intron
TGAAAATGCCGCGTTTGGGT+TGG 0.509827 5:+15773684 MsG0580025241.01.T01:CDS
ATTAATTGGGTGCTGAAAGA+TGG 0.514735 5:+15773572 MsG0580025241.01.T01:CDS
TTGCCGGTTTCGCTGCTCAA+AGG 0.516830 5:+15774807 MsG0580025241.01.T01:CDS
AAGTTCAAGGAATGGTCAGC+AGG 0.525159 5:+15775058 MsG0580025241.01.T01:CDS
AAATTATAGGTAATTGCTAA+AGG 0.526664 5:+15775033 MsG0580025241.01.T01:intron
TATGCTGTTGGATTAGGGAA+AGG 0.529861 5:+15773527 MsG0580025241.01.T01:CDS
ACAAACAAATGAGGAAAAGC+AGG 0.536369 5:-15773718 None:intergenic
ATTGCTAAAGGTGAAGTTCA+AGG 0.538236 5:+15775045 MsG0580025241.01.T01:CDS
TGCTGGAAATAGCGGCTCCT+CGG 0.547768 5:-15776670 None:intergenic
TGCTGTTGGATTAGGGAAAG+GGG 0.556262 5:+15773529 MsG0580025241.01.T01:CDS
CCAGGCTCCTCCAGTTAAAG+AGG 0.557019 5:+15776641 MsG0580025241.01.T01:CDS
CAATTAATAGCAGCAGCAGT+AGG 0.568748 5:-15773557 None:intergenic
TGAATATCTACTGAGTGGCC+AGG 0.570442 5:+15776623 MsG0580025241.01.T01:CDS
GCAAATATCTCTAGAATATG+CGG 0.570621 5:+15778467 MsG0580025241.01.T01:CDS
AAATATCTTTCAAATTATCA+GGG 0.573226 5:-15773281 None:intergenic
GATATTTGCAGCCTACCACC+AGG 0.576359 5:-15778453 None:intergenic
CCCATTTACGAAGTCAAAGG+TGG 0.581264 5:+15773240 MsG0580025241.01.T01:CDS
TATCTCTAGAATATGCGGAA+AGG 0.584046 5:+15778472 MsG0580025241.01.T01:CDS
TTGTCAGGTGAGTGGAGTGT+TGG 0.587365 5:+15773487 MsG0580025241.01.T01:CDS
TTCACAGCTGGATATGCTCA+AGG 0.591212 5:+15778350 MsG0580025241.01.T01:CDS
GGTGTTGCTTGTCAGGTGAG+TGG 0.592788 5:+15773479 MsG0580025241.01.T01:CDS
TAAAGGTGAAGTTCAAGGAA+TGG 0.600002 5:+15775050 MsG0580025241.01.T01:CDS
AACGCAGGAATTGAAGGTAG+AGG 0.600518 5:+15778411 MsG0580025241.01.T01:CDS
CCAATAGGCACAAACAAATG+AGG 0.602116 5:-15773727 None:intergenic
ATGGGTACTGCTGGAAATAG+CGG 0.609812 5:-15776678 None:intergenic
AGAGATGATGGAGAATCAGT+TGG 0.613056 5:+15778510 MsG0580025241.01.T01:CDS
ATGACTGCAAACCTGGTGGT+AGG 0.621598 5:+15778442 MsG0580025241.01.T01:CDS
CAACCCATTTACGAAGTCAA+AGG 0.627476 5:+15773237 MsG0580025241.01.T01:CDS
GCATTGACCTCTTTAACTGG+AGG 0.635173 5:-15776648 None:intergenic
TTCAGTGAATATCTACTGAG+TGG 0.652633 5:+15776618 MsG0580025241.01.T01:CDS
TATTGGTTAGAGAAGAACGC+AGG 0.668556 5:+15778396 MsG0580025241.01.T01:CDS
AGTTAAAGAGGTCAATGCCG+AGG 0.671960 5:+15776653 MsG0580025241.01.T01:CDS
ACACATCTCCAACCCAAACG+CGG 0.707264 5:-15773692 None:intergenic
CTTTATGACTGCAAACCTGG+TGG 0.707951 5:+15778438 MsG0580025241.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAGTAGTATTAATA+AGG + Chr5:15777738-15777757 MsG0580025241.01.T01:intron 10.0%
!! TAAATTAGTAGTATTAATAA+GGG + Chr5:15777739-15777758 MsG0580025241.01.T01:intron 10.0%
!! TATAAAACTATATGATTAAA+TGG - Chr5:15776351-15776370 None:intergenic 10.0%
!!! ATCAAATCATTTTAAAAAAA+AGG - Chr5:15776204-15776223 None:intergenic 10.0%
!!! ATTATTTTAATCGTTAATAT+TGG + Chr5:15776286-15776305 MsG0580025241.01.T01:intron 10.0%
!!! TAATATTATTGATAATAACT+TGG + Chr5:15777143-15777162 MsG0580025241.01.T01:intron 10.0%
!!! TCAAATCATTTTAAAAAAAA+GGG - Chr5:15776203-15776222 None:intergenic 10.0%
!!! TTTATTTTTTAATGCTAATT+TGG + Chr5:15776169-15776188 MsG0580025241.01.T01:intron 10.0%
!! AAAATATCTTTCAAATTATC+AGG - Chr5:15773285-15773304 None:intergenic 15.0%
!! AAATATCTTTCAAATTATCA+GGG - Chr5:15773284-15773303 None:intergenic 15.0%
!! AAATTAGTAGTATTAATAAG+GGG + Chr5:15777740-15777759 MsG0580025241.01.T01:intron 15.0%
!! GAAAAATAACTCTAAATTAT+AGG + Chr5:15775020-15775039 MsG0580025241.01.T01:intron 15.0%
!!! AGATTTTCTATTATATTTCA+TGG + Chr5:15778264-15778283 MsG0580025241.01.T01:intron 15.0%
!!! ATTATTTAGAGTATTCATTA+TGG + Chr5:15773444-15773463 MsG0580025241.01.T01:intron 15.0%
!!! ATTTTTATATCTTTGCAAAA+CGG - Chr5:15774361-15774380 None:intergenic 15.0%
!!! GAGATATGAAAATTAATTTT+AGG + Chr5:15777229-15777248 MsG0580025241.01.T01:intron 15.0%
!!! GATTTTCTATTATATTTCAT+GGG + Chr5:15778265-15778284 MsG0580025241.01.T01:intron 15.0%
!!! GTATATATTTTTTGTCTATT+TGG + Chr5:15774647-15774666 MsG0580025241.01.T01:intron 15.0%
!! AAACTCAACAAATTAATAAG+GGG - Chr5:15775496-15775515 None:intergenic 20.0%
!! AAATTATAGGTAATTGCTAA+AGG + Chr5:15775033-15775052 MsG0580025241.01.T01:intron 20.0%
!! AATTTATCTTGAAAGATGAA+AGG - Chr5:15777725-15777744 None:intergenic 20.0%
!! ATAAATAGACAGAAAGAATT+TGG + Chr5:15775443-15775462 MsG0580025241.01.T01:intron 20.0%
!! ATACTAAAACAACATTAAAC+AGG - Chr5:15774188-15774207 None:intergenic 20.0%
!! ATGTTTCTTTAATCAATTGT+TGG + Chr5:15776497-15776516 MsG0580025241.01.T01:intron 20.0%
!! ATTATCAAAATGAGATTCAT+TGG + Chr5:15773872-15773891 MsG0580025241.01.T01:intron 20.0%
!! CTTATAGATATAATAGAACT+TGG + Chr5:15774498-15774517 MsG0580025241.01.T01:intron 20.0%
!! GAAACTCAACAAATTAATAA+GGG - Chr5:15775497-15775516 None:intergenic 20.0%
!! GGTAAAATAATCAATAAACA+AGG - Chr5:15776588-15776607 None:intergenic 20.0%
!! TAAATAGACAGAAAGAATTT+GGG + Chr5:15775444-15775463 MsG0580025241.01.T01:intron 20.0%
!! TATATAGCAAATTTCTAATC+TGG - Chr5:15776795-15776814 None:intergenic 20.0%
!! TATGTAAAAAGTTCTTGTTA+AGG + Chr5:15774253-15774272 MsG0580025241.01.T01:intron 20.0%
!! TGAATGGTTTAAAAAAACTA+TGG - Chr5:15774400-15774419 None:intergenic 20.0%
!! TTATATCTCAATATCTCTTT+GGG + Chr5:15776843-15776862 MsG0580025241.01.T01:intron 20.0%
!! TTGAAAAAATTTGGTTATAC+CGG + Chr5:15775312-15775331 MsG0580025241.01.T01:intron 20.0%
!! TTGTTACTCTTGAAAAAATT+TGG + Chr5:15775303-15775322 MsG0580025241.01.T01:intron 20.0%
!! TTTATATCTCAATATCTCTT+TGG + Chr5:15776842-15776861 MsG0580025241.01.T01:intron 20.0%
!!! ATAAAAAGTGCTTTAAAATC+CGG - Chr5:15775718-15775737 None:intergenic 20.0%
!!! ATTTTGATGTTAATCCTAAA+GGG + Chr5:15773638-15773657 MsG0580025241.01.T01:intron 20.0%
!!! CATATATCTTCTTTTTTTGA+AGG + Chr5:15777648-15777667 MsG0580025241.01.T01:intron 20.0%
!!! CTTTTCTCTTTATAAAATGA+AGG + Chr5:15778150-15778169 MsG0580025241.01.T01:intron 20.0%
!!! GATTAAATGGTATTTTTTGA+AGG - Chr5:15776338-15776357 None:intergenic 20.0%
!!! GATTGGTATTTTTTTTTGAA+GGG + Chr5:15777935-15777954 MsG0580025241.01.T01:intron 20.0%
!!! TAAAGCTGATTTATGATTTT+TGG + Chr5:15776089-15776108 MsG0580025241.01.T01:intron 20.0%
!!! TGATTGGTATTTTTTTTTGA+AGG + Chr5:15777934-15777953 MsG0580025241.01.T01:intron 20.0%
!!! TGTTTATTGATTATTTTACC+AGG + Chr5:15776588-15776607 MsG0580025241.01.T01:intron 20.0%
!!! TTATCATATAATTTTGTCTC+TGG + Chr5:15776413-15776432 MsG0580025241.01.T01:intron 20.0%
! AAGAAATTCAAGATTCTCTA+AGG - Chr5:15775753-15775772 None:intergenic 25.0%
! AAGATTGAAAACTAATCCTA+GGG + Chr5:15777305-15777324 MsG0580025241.01.T01:intron 25.0%
! ACCACTCATTTAAATACTAA+GGG + Chr5:15777072-15777091 MsG0580025241.01.T01:intron 25.0%
! ATGATAATTCAGAAAACAAC+CGG - Chr5:15773322-15773341 None:intergenic 25.0%
! CACTTATTATACAAAAAGCT+TGG - Chr5:15773365-15773384 None:intergenic 25.0%
! CAGTGAAATTATCAACAATA+AGG + Chr5:15778111-15778130 MsG0580025241.01.T01:intron 25.0%
! CTCTTACTATGATAACTTAA+GGG + Chr5:15776913-15776932 MsG0580025241.01.T01:intron 25.0%
! CTTTGTAGTTATATATTAGC+TGG - Chr5:15778246-15778265 None:intergenic 25.0%
! GAGAATCTTGAATTTCTTAT+AGG + Chr5:15775755-15775774 MsG0580025241.01.T01:intron 25.0%
! GGAAACTCAACAAATTAATA+AGG - Chr5:15775498-15775517 None:intergenic 25.0%
! GTGTGTATAATGAATAACAA+AGG - Chr5:15776990-15777009 None:intergenic 25.0%
! TAAGATTGAAAACTAATCCT+AGG + Chr5:15777304-15777323 MsG0580025241.01.T01:intron 25.0%
! TATGGTTCAATTGGTTAAAT+CGG - Chr5:15775673-15775692 None:intergenic 25.0%
! TCTCTTACTATGATAACTTA+AGG + Chr5:15776912-15776931 MsG0580025241.01.T01:intron 25.0%
! TGAAATTATCAACAATAAGG+AGG + Chr5:15778114-15778133 MsG0580025241.01.T01:intron 25.0%
! TGTATAATGAATAACAAAGG+TGG - Chr5:15776987-15777006 None:intergenic 25.0%
! TTATCATAGTAAGAGAAAGA+GGG - Chr5:15776908-15776927 None:intergenic 25.0%
! TTTCTTTAATCAATTGTTGG+AGG + Chr5:15776500-15776519 MsG0580025241.01.T01:intron 25.0%
!! CATCAATTGATTTAATAGCT+GGG + Chr5:15777885-15777904 MsG0580025241.01.T01:intron 25.0%
!! CATTTTCAGATGATAAAGAA+CGG - Chr5:15773206-15773225 None:intergenic 25.0%
!! CCTTTTCAGTTTGATTATAT+GGG + Chr5:15774855-15774874 MsG0580025241.01.T01:intron 25.0%
!! GTTGATAGATAAGTTTCTAA+AGG - Chr5:15773826-15773845 None:intergenic 25.0%
!!! AAAGCACTTTTTATAACACT+TGG + Chr5:15775724-15775743 MsG0580025241.01.T01:intron 25.0%
!!! ATTGATTATTTTACCAGGTT+TGG + Chr5:15776593-15776612 MsG0580025241.01.T01:intron 25.0%
!!! CATTTTGATGTTAATCCTAA+AGG + Chr5:15773637-15773656 MsG0580025241.01.T01:intron 25.0%
!!! GGTTTGATTTGTTTGTTAAA+AGG + Chr5:15776548-15776567 MsG0580025241.01.T01:intron 25.0%
!!! TATCACATTCTAGAATATCT+TGG - Chr5:15777337-15777356 None:intergenic 25.0%
!!! TATGACTTCACTTTTATGAT+AGG + Chr5:15778008-15778027 MsG0580025241.01.T01:intron 25.0%
!!! TCTTAGTAAGATTTTGTTGT+CGG + Chr5:15773604-15773623 MsG0580025241.01.T01:intron 25.0%
!!! TTTTTTGAAGAAGCAATTGT+AGG + Chr5:15777262-15777281 MsG0580025241.01.T01:intron 25.0%
AAAACAACATTAAACAGGCT+CGG - Chr5:15774183-15774202 None:intergenic 30.0%
AAAATAGTCATGCAGATGAA+TGG - Chr5:15774416-15774435 None:intergenic 30.0%
AAATTTCTAATCTGGAAGAC+AGG - Chr5:15776787-15776806 None:intergenic 30.0%
AACACAGCTTCAAGAAAATT+GGG - Chr5:15775280-15775299 None:intergenic 30.0%
AACTGATATTGCAATGTGTT+TGG + Chr5:15773843-15773862 MsG0580025241.01.T01:intron 30.0%
ACCCTTAGTATTTAAATGAG+TGG - Chr5:15777076-15777095 None:intergenic 30.0%
ACTACACTAAATTTAGGTAG+TGG + Chr5:15773964-15773983 MsG0580025241.01.T01:intron 30.0%
ACTATGATAACTTAAGGGAA+GGG + Chr5:15776918-15776937 MsG0580025241.01.T01:intron 30.0%
AGAGATATCGCAAACTATTT+AGG - Chr5:15775645-15775664 None:intergenic 30.0%
AGATTGAAAACTAATCCTAG+GGG + Chr5:15777306-15777325 MsG0580025241.01.T01:intron 30.0%
AGCTATATGAACATATGTCA+TGG + Chr5:15777440-15777459 MsG0580025241.01.T01:intron 30.0%
ATTATTGGACATGAAACATG+TGG + Chr5:15777037-15777056 MsG0580025241.01.T01:intron 30.0%
CACCACTCATTTAAATACTA+AGG + Chr5:15777071-15777090 MsG0580025241.01.T01:intron 30.0%
CATGTCGACAAAAAAAAAAG+TGG + Chr5:15773938-15773957 MsG0580025241.01.T01:intron 30.0%
CCCATATAATCAAACTGAAA+AGG - Chr5:15774858-15774877 None:intergenic 30.0%
GGCAAGTATTAAAAAGTGAT+TGG + Chr5:15777918-15777937 MsG0580025241.01.T01:intron 30.0%
GTTATCATAGTAAGAGAAAG+AGG - Chr5:15776909-15776928 None:intergenic 30.0%
GTTTGGTAGATATGTTAAAC+AGG - Chr5:15774538-15774557 None:intergenic 30.0%
TACTATGATAACTTAAGGGA+AGG + Chr5:15776917-15776936 MsG0580025241.01.T01:intron 30.0%
TCAAAATGAGATTCATTGGA+AGG + Chr5:15773876-15773895 MsG0580025241.01.T01:intron 30.0%
TCAATCTAATACTTCCAAGA+AGG - Chr5:15777557-15777576 None:intergenic 30.0%
TCTTCTTCTACTAATACTAG+TGG + Chr5:15774935-15774954 MsG0580025241.01.T01:intron 30.0%
TGATAATTCAGAAAACAACC+GGG - Chr5:15773321-15773340 None:intergenic 30.0%
TGGTTGACTACACTAAATTT+AGG + Chr5:15773958-15773977 MsG0580025241.01.T01:intron 30.0%
TGTCCAATAATTCCAAGATT+CGG - Chr5:15777028-15777047 None:intergenic 30.0%
TTATTGGACATGAAACATGT+GGG + Chr5:15777038-15777057 MsG0580025241.01.T01:intron 30.0%
TTCAATCATGTTAGAGATGA+TGG + Chr5:15778498-15778517 MsG0580025241.01.T01:CDS 30.0%
TTCAGGTCAACTATCTTTAT+TGG + Chr5:15778379-15778398 MsG0580025241.01.T01:CDS 30.0%
TTTCACACTGCATATAAATG+AGG - Chr5:15774700-15774719 None:intergenic 30.0%
! AAATTCAAGATTCTCTAAGG+CGG - Chr5:15775750-15775769 None:intergenic 30.0%
! ATATAATTTTGTCTCTGGTG+GGG + Chr5:15776418-15776437 MsG0580025241.01.T01:intron 30.0%
! ATGAATGGTTTGAAACTCAA+GGG - Chr5:15774304-15774323 None:intergenic 30.0%
! CATATAATTTTGTCTCTGGT+GGG + Chr5:15776417-15776436 MsG0580025241.01.T01:intron 30.0%
! GCAAAAGGTGCATTTAATAT+GGG - Chr5:15776699-15776718 None:intergenic 30.0%
! GCAAACTATTTAGGTTTGTT+TGG - Chr5:15775636-15775655 None:intergenic 30.0%
! GCATCAATTGATTTAATAGC+TGG + Chr5:15777884-15777903 MsG0580025241.01.T01:intron 30.0%
! GCCTTTTCAGTTTGATTATA+TGG + Chr5:15774854-15774873 MsG0580025241.01.T01:intron 30.0%
! TAATCACTTGTTACACTGTT+TGG - Chr5:15773428-15773447 None:intergenic 30.0%
! TCATATAATTTTGTCTCTGG+TGG + Chr5:15776416-15776435 MsG0580025241.01.T01:intron 30.0%
! TGCAAAAGGTGCATTTAATA+TGG - Chr5:15776700-15776719 None:intergenic 30.0%
! TGCATGACTATTTTCACATT+TGG + Chr5:15774422-15774441 MsG0580025241.01.T01:intron 30.0%
! TTAGAGTATTCATTATGGAG+AGG + Chr5:15773449-15773468 MsG0580025241.01.T01:intron 30.0%
! TTCTTTGATTCAGGTTATGA+TGG + Chr5:15773780-15773799 MsG0580025241.01.T01:intron 30.0%
!! GCAAATATCTCTAGAATATG+CGG + Chr5:15778467-15778486 MsG0580025241.01.T01:CDS 30.0%
!! GTTGATAATTTCACTGAGTT+TGG - Chr5:15778107-15778126 None:intergenic 30.0%
!! TAAGATTTTGTTGTCGGATT+CGG + Chr5:15773610-15773629 MsG0580025241.01.T01:intron 30.0%
!!! ACACAACTTTTTTTCAAAGG+GGG + Chr5:15777822-15777841 MsG0580025241.01.T01:intron 30.0%
!!! AGTGTAGAGAGTTTTTAGTT+AGG + Chr5:15773381-15773400 MsG0580025241.01.T01:intron 30.0%
!!! ATGAAACAGAGGTTTTGTTT+GGG + Chr5:15775337-15775356 MsG0580025241.01.T01:intron 30.0%
!!! CACTTTTTTTTTTGTCGACA+TGG - Chr5:15773940-15773959 None:intergenic 30.0%
!!! GACACAACTTTTTTTCAAAG+GGG + Chr5:15777821-15777840 MsG0580025241.01.T01:intron 30.0%
!!! GGACACAACTTTTTTTCAAA+GGG + Chr5:15777820-15777839 MsG0580025241.01.T01:intron 30.0%
!!! TAAGCTGATTTTGTTTTCAC+AGG + Chr5:15774763-15774782 MsG0580025241.01.T01:intron 30.0%
!!! TTTTTTTGAAGGGAAGTGAT+TGG + Chr5:15777945-15777964 MsG0580025241.01.T01:intron 30.0%
AAAAAATCTTCACCGCAAAC+AGG - Chr5:15775984-15776003 None:intergenic 35.0%
AAAAATCTTCACCGCAAACA+GGG - Chr5:15775983-15776002 None:intergenic 35.0%
AAAGAGCTTATGAAAAGCGA+TGG - Chr5:15777617-15777636 None:intergenic 35.0%
ACAAAAGAAGCAAGAACAAG+AGG - Chr5:15775138-15775157 None:intergenic 35.0%
ACAAACAAATGAGGAAAAGC+AGG - Chr5:15773721-15773740 None:intergenic 35.0%
ACTTTAGATTGCAGTACATG+TGG - Chr5:15775175-15775194 None:intergenic 35.0%
AGCTTTCATCTGATCATTCT+AGG - Chr5:15774575-15774594 None:intergenic 35.0%
AGGAAGTAATTGTAGATAGG+GGG - Chr5:15777594-15777613 None:intergenic 35.0%
ATAGCAACTAGCAAGCAATT+AGG - Chr5:15776123-15776142 None:intergenic 35.0%
ATCAGATTTCCTAACACTGT+GGG + Chr5:15777359-15777378 MsG0580025241.01.T01:intron 35.0%
ATCTCTAGTGTTGTCTACAT+TGG - Chr5:15774047-15774066 None:intergenic 35.0%
ATTGCTAAAGGTGAAGTTCA+AGG + Chr5:15775045-15775064 MsG0580025241.01.T01:CDS 35.0%
CATATTGGAGACAAGAGTTA+TGG - Chr5:15775691-15775710 None:intergenic 35.0%
CATTATACACACTGTTGTGA+AGG + Chr5:15776998-15777017 MsG0580025241.01.T01:intron 35.0%
CTCAACAAATTAATAAGGGG+AGG - Chr5:15775493-15775512 None:intergenic 35.0%
GAACACAGCTTCAAGAAAAT+TGG - Chr5:15775281-15775300 None:intergenic 35.0%
GACAAGAGTTATGGTTCAAT+TGG - Chr5:15775682-15775701 None:intergenic 35.0%
GAGGAAGTAATTGTAGATAG+GGG - Chr5:15777595-15777614 None:intergenic 35.0%
GGAGGAAGTAATTGTAGATA+GGG - Chr5:15777596-15777615 None:intergenic 35.0%
GGTAGATATGTTAAACAGGA+TGG - Chr5:15774534-15774553 None:intergenic 35.0%
TAAAGGTGAAGTTCAAGGAA+TGG + Chr5:15775050-15775069 MsG0580025241.01.T01:CDS 35.0%
TAACATGTTCGTGATGATTC+AGG + Chr5:15778308-15778327 MsG0580025241.01.T01:intron 35.0%
TACTGCTGCTGCTATTAATT+GGG + Chr5:15773559-15773578 MsG0580025241.01.T01:CDS 35.0%
TATCAGATTTCCTAACACTG+TGG + Chr5:15777358-15777377 MsG0580025241.01.T01:intron 35.0%
TATTCACTGAAAACCAAACC+TGG - Chr5:15776609-15776628 None:intergenic 35.0%
TCAAAGGTGGAAACTTGATT+AGG + Chr5:15773253-15773272 MsG0580025241.01.T01:CDS 35.0%
TCAGAAGATACTTACTTGCA+CGG - Chr5:15775235-15775254 None:intergenic 35.0%
TGCTTTATGCTGTTGGATTA+GGG + Chr5:15773522-15773541 MsG0580025241.01.T01:CDS 35.0%
TGGAGGAAGTAATTGTAGAT+AGG - Chr5:15777597-15777616 None:intergenic 35.0%
TGGTTCATAGTAGTGAACAT+GGG + Chr5:15773984-15774003 MsG0580025241.01.T01:intron 35.0%
TTAAAATCCGGACTGCATAT+TGG - Chr5:15775706-15775725 None:intergenic 35.0%
TTAATCAATTGTTGGAGGAC+TGG + Chr5:15776505-15776524 MsG0580025241.01.T01:intron 35.0%
TTCAGTGAATATCTACTGAG+TGG + Chr5:15776618-15776637 MsG0580025241.01.T01:CDS 35.0%
TTGATGTTAATCCTAAAGGG+TGG + Chr5:15773641-15773660 MsG0580025241.01.T01:intron 35.0%
TTGCTTTATGCTGTTGGATT+AGG + Chr5:15773521-15773540 MsG0580025241.01.T01:CDS 35.0%
TTTGTTGAGTTTCCCTGAAT+CGG + Chr5:15775504-15775523 MsG0580025241.01.T01:intron 35.0%
! ATGCACCTAGTAATTTGCAT+AGG + Chr5:15777784-15777803 MsG0580025241.01.T01:intron 35.0%
! ATTTAAAGTCCGCAGTTGAA+TGG - Chr5:15775207-15775226 None:intergenic 35.0%
! CAACTCACTTTGTTTGCAAA+AGG - Chr5:15776714-15776733 None:intergenic 35.0%
! GATGAATGGTTTGAAACTCA+AGG - Chr5:15774305-15774324 None:intergenic 35.0%
! GTATTAATAAGGGGTGTGTT+TGG + Chr5:15777749-15777768 MsG0580025241.01.T01:intron 35.0%
! TAAAGAAACTTGTTCACAGC+TGG + Chr5:15778338-15778357 MsG0580025241.01.T01:CDS 35.0%
! TGCACCTAGTAATTTGCATA+GGG + Chr5:15777785-15777804 MsG0580025241.01.T01:intron 35.0%
! TTACGATGTTTCTATACCCA+TGG + Chr5:15776458-15776477 MsG0580025241.01.T01:intron 35.0%
! TTTGACTTCGTAAATGGGTT+GGG - Chr5:15773238-15773257 None:intergenic 35.0%
!! AAGATTTTGTTGTCGGATTC+GGG + Chr5:15773611-15773630 MsG0580025241.01.T01:intron 35.0%
!! ATCTCTAGAATATGCGGAAA+GGG + Chr5:15778473-15778492 MsG0580025241.01.T01:CDS 35.0%
!! ATTAATTGGGTGCTGAAAGA+TGG + Chr5:15773572-15773591 MsG0580025241.01.T01:CDS 35.0%
!! TATCTCTAGAATATGCGGAA+AGG + Chr5:15778472-15778491 MsG0580025241.01.T01:CDS 35.0%
!!! GATGAAACAGAGGTTTTGTT+TGG + Chr5:15775336-15775355 MsG0580025241.01.T01:intron 35.0%
!!! GGGACACAACTTTTTTTCAA+AGG + Chr5:15777819-15777838 MsG0580025241.01.T01:intron 35.0%
AAAGGTAGATCGTGAAATCG+TGG + Chr5:15775899-15775918 MsG0580025241.01.T01:intron 40.0%
AAATACTCTCCTGTGTGGTT+GGG + Chr5:15774601-15774620 MsG0580025241.01.T01:intron 40.0%
AACGGGTCATATGGATCAAA+AGG - Chr5:15775956-15775975 None:intergenic 40.0%
AAGGTAGATCGTGAAATCGT+GGG + Chr5:15775900-15775919 MsG0580025241.01.T01:intron 40.0%
AATATCTCTTTGGGCTCTTG+AGG + Chr5:15776852-15776871 MsG0580025241.01.T01:intron 40.0%
AATATCTTGGTTTAGCCCCT+AGG - Chr5:15777324-15777343 None:intergenic 40.0%
ACACTGTTTGGAAAACCTTC+AGG - Chr5:15773416-15773435 None:intergenic 40.0%
ACATGAAATACTCTCCTGTG+TGG + Chr5:15774596-15774615 MsG0580025241.01.T01:intron 40.0%
ACCAGGTTTGCAGTCATAAA+GGG - Chr5:15778439-15778458 None:intergenic 40.0%
AGATACTTACTTGCACGGTA+AGG - Chr5:15775230-15775249 None:intergenic 40.0%
AGCAGTGCAAAAATTGTTGG+AGG + Chr5:15775867-15775886 MsG0580025241.01.T01:intron 40.0%
AGGAAGACTACAGTGAAGTT+TGG - Chr5:15774555-15774574 None:intergenic 40.0%
ATGCCCCTATGCAAATTACT+AGG - Chr5:15777792-15777811 None:intergenic 40.0%
ATTTGTTTCCTGATCTCCCT+AGG - Chr5:15777201-15777220 None:intergenic 40.0%
CAAAACCTCTGTTTCATCAC+CGG - Chr5:15775334-15775353 None:intergenic 40.0%
CAACCCATTTACGAAGTCAA+AGG + Chr5:15773237-15773256 MsG0580025241.01.T01:CDS 40.0%
CAAGCTTTGCTTTATGCTGT+TGG + Chr5:15773515-15773534 MsG0580025241.01.T01:CDS 40.0%
CAATTAATAGCAGCAGCAGT+AGG - Chr5:15773560-15773579 None:intergenic 40.0%
CATCGAATCCTAGTCCATTA+TGG - Chr5:15774014-15774033 None:intergenic 40.0%
CCAATAGGCACAAACAAATG+AGG - Chr5:15773730-15773749 None:intergenic 40.0%
CCTCATTTGTTTGTGCCTAT+TGG + Chr5:15773727-15773746 MsG0580025241.01.T01:CDS 40.0%
CTACATCTTGTCTGAGAACA+CGG + Chr5:15778173-15778192 MsG0580025241.01.T01:intron 40.0%
CTACTGCTGCTGCTATTAAT+TGG + Chr5:15773558-15773577 MsG0580025241.01.T01:CDS 40.0%
GACATCTAGAAATGCTGCTA+GGG + Chr5:15776527-15776546 MsG0580025241.01.T01:intron 40.0%
GATTTAATAGCTGGGCACAA+GGG + Chr5:15777893-15777912 MsG0580025241.01.T01:intron 40.0%
GCAGTGCAAAAATTGTTGGA+GGG + Chr5:15775868-15775887 MsG0580025241.01.T01:intron 40.0%
GCCTTATAATTACGGACAGA+GGG + Chr5:15777844-15777863 MsG0580025241.01.T01:intron 40.0%
GGACCGAATCTTGGAATTAT+TGG + Chr5:15777022-15777041 MsG0580025241.01.T01:intron 40.0%
GTATTAGATTGAAGCCATGC+AGG + Chr5:15777565-15777584 MsG0580025241.01.T01:intron 40.0%
GTCAGCAGGTTTATTGGTAT+CGG + Chr5:15775072-15775091 MsG0580025241.01.T01:CDS 40.0%
GTGGTTCATAGTAGTGAACA+TGG + Chr5:15773983-15774002 MsG0580025241.01.T01:intron 40.0%
TACATCTTGTCTGAGAACAC+GGG + Chr5:15778174-15778193 MsG0580025241.01.T01:intron 40.0%
TATACACACTGTTGTGAAGG+TGG + Chr5:15777001-15777020 MsG0580025241.01.T01:intron 40.0%
TATTATTCACTCTGCGCGAA+AGG - Chr5:15776071-15776090 None:intergenic 40.0%
TCAGCAGGTTTATTGGTATC+GGG + Chr5:15775073-15775092 MsG0580025241.01.T01:CDS 40.0%
TCAGTACTCATGCAGATGAA+TGG - Chr5:15774319-15774338 None:intergenic 40.0%
TCCCTCTGTCCGTAATTATA+AGG - Chr5:15777848-15777867 None:intergenic 40.0%
TGAACATGGGTTCACCATAA+TGG + Chr5:15773997-15774016 MsG0580025241.01.T01:intron 40.0%
TGATTTAATAGCTGGGCACA+AGG + Chr5:15777892-15777911 MsG0580025241.01.T01:intron 40.0%
TGGAGCAGTGCAAAAATTGT+TGG + Chr5:15775864-15775883 MsG0580025241.01.T01:intron 40.0%
TTATACCGGTGATGAAACAG+AGG + Chr5:15775326-15775345 MsG0580025241.01.T01:intron 40.0%
TTCTTGAAAATGCCGCGTTT+GGG + Chr5:15773680-15773699 MsG0580025241.01.T01:CDS 40.0%
TTGTTGAGTTTCCCTGAATC+GGG + Chr5:15775505-15775524 MsG0580025241.01.T01:intron 40.0%
! ATGCTGTTGGATTAGGGAAA+GGG + Chr5:15773528-15773547 MsG0580025241.01.T01:CDS 40.0%
! CAAAGGGGGCCTTATAATTA+CGG + Chr5:15777836-15777855 MsG0580025241.01.T01:intron 40.0%
! CCACCTTTGACTTCGTAAAT+GGG - Chr5:15773243-15773262 None:intergenic 40.0%
! CTTCTTTTGTGTCGTGACTT+GGG + Chr5:15775148-15775167 MsG0580025241.01.T01:intron 40.0%
! CTTTGACTTCGTAAATGGGT+TGG - Chr5:15773239-15773258 None:intergenic 40.0%
! GCACCTAGTAATTTGCATAG+GGG + Chr5:15777786-15777805 MsG0580025241.01.T01:intron 40.0%
! GCATTTAATATGGGTACTGC+TGG - Chr5:15776690-15776709 None:intergenic 40.0%
! TATGCTGTTGGATTAGGGAA+AGG + Chr5:15773527-15773546 MsG0580025241.01.T01:CDS 40.0%
! TATTGGTTAGAGAAGAACGC+AGG + Chr5:15778396-15778415 MsG0580025241.01.T01:CDS 40.0%
! TCCACCTTTGACTTCGTAAA+TGG - Chr5:15773244-15773263 None:intergenic 40.0%
! TGCTCAAAGGAATTTTGCTG+AGG + Chr5:15774820-15774839 MsG0580025241.01.T01:CDS 40.0%
! TGTTTTCACAGGCTTCTACT+AGG + Chr5:15774774-15774793 MsG0580025241.01.T01:intron 40.0%
!! ACTAGGAGTTGTTTCTTTGC+CGG + Chr5:15774791-15774810 MsG0580025241.01.T01:CDS 40.0%
!! AGAGATGATGGAGAATCAGT+TGG + Chr5:15778510-15778529 MsG0580025241.01.T01:CDS 40.0%
!! CATGAGTACTGAGTACAGAA+TGG + Chr5:15774327-15774346 MsG0580025241.01.T01:intron 40.0%
!! TAAGGAACCATTGAGTTGAG+TGG + Chr5:15774271-15774290 MsG0580025241.01.T01:intron 40.0%
!! TATGCTCAAGGCATTGTTTC+AGG + Chr5:15778362-15778381 MsG0580025241.01.T01:CDS 40.0%
!! TCATTATGGAGAGGTGTTCA+AGG + Chr5:15773458-15773477 MsG0580025241.01.T01:intron 40.0%
!! TGCATAGGGGCATTTATTCA+GGG + Chr5:15777799-15777818 MsG0580025241.01.T01:intron 40.0%
!! TTGCATAGGGGCATTTATTC+AGG + Chr5:15777798-15777817 MsG0580025241.01.T01:intron 40.0%
!!! AGAGGTTTTGTTTGGGAGTT+GGG + Chr5:15775344-15775363 MsG0580025241.01.T01:intron 40.0%
AAACCCTCGAGTATCCTTCT+TGG + Chr5:15777540-15777559 MsG0580025241.01.T01:intron 45.0%
AACCAAAACCTCCCGATTCA+GGG - Chr5:15775519-15775538 None:intergenic 45.0%
AACGCAGGAATTGAAGGTAG+AGG + Chr5:15778411-15778430 MsG0580025241.01.T01:CDS 45.0%
AAGTTCAAGGAATGGTCAGC+AGG + Chr5:15775058-15775077 MsG0580025241.01.T01:CDS 45.0%
AATACTCTCCTGTGTGGTTG+GGG + Chr5:15774602-15774621 MsG0580025241.01.T01:intron 45.0%
ACCAAGACCACTCAACTCAA+TGG - Chr5:15774281-15774300 None:intergenic 45.0%
ACCCTTTATGACTGCAAACC+TGG + Chr5:15778435-15778454 MsG0580025241.01.T01:CDS 45.0%
ACCGCAAACAGGGTTAAAAC+GGG - Chr5:15775973-15775992 None:intergenic 45.0%
ACTTCCAAGAAGGATACTCG+AGG - Chr5:15777547-15777566 None:intergenic 45.0%
AGAGGGACGACATAATGCAT+AGG - Chr5:15775561-15775580 None:intergenic 45.0%
AGATTTCCTAACACTGTGGG+AGG + Chr5:15777362-15777381 MsG0580025241.01.T01:intron 45.0%
AGCAGCGATTTATCTTGCAC+CGG + Chr5:15775923-15775942 MsG0580025241.01.T01:intron 45.0%
AGGGACGACATAATGCATAG+GGG - Chr5:15775559-15775578 None:intergenic 45.0%
AGTTAAAGAGGTCAATGCCG+AGG + Chr5:15776653-15776672 MsG0580025241.01.T01:CDS 45.0%
ATCGGCTGCTTCTTTGATTC+AGG + Chr5:15773771-15773790 MsG0580025241.01.T01:CDS 45.0%
ATTCCTTTGAGCAGCGAAAC+CGG - Chr5:15774813-15774832 None:intergenic 45.0%
ATTTCCTAACACTGTGGGAG+GGG + Chr5:15777364-15777383 MsG0580025241.01.T01:intron 45.0%
CACCAGGTTTGCAGTCATAA+AGG - Chr5:15778440-15778459 None:intergenic 45.0%
CACCGCAAACAGGGTTAAAA+CGG - Chr5:15775974-15775993 None:intergenic 45.0%
CAGGGTTAAAACGGGTCATA+TGG - Chr5:15775965-15775984 None:intergenic 45.0%
CATGTTCGTGATGATTCAGG+TGG + Chr5:15778311-15778330 MsG0580025241.01.T01:intron 45.0%
CCCATTTACGAAGTCAAAGG+TGG + Chr5:15773240-15773259 MsG0580025241.01.T01:CDS 45.0%
CTTACCAGTCCATTCAACTG+CGG + Chr5:15775195-15775214 MsG0580025241.01.T01:intron 45.0%
CTTCCAAGAAGGATACTCGA+GGG - Chr5:15777546-15777565 None:intergenic 45.0%
CTTCTTGAAAATGCCGCGTT+TGG + Chr5:15773679-15773698 MsG0580025241.01.T01:CDS 45.0%
CTTGTCTCCAATATGCAGTC+CGG + Chr5:15775696-15775715 MsG0580025241.01.T01:intron 45.0%
CTTTATGACTGCAAACCTGG+TGG + Chr5:15778438-15778457 MsG0580025241.01.T01:CDS 45.0%
GAAATACTCTCCTGTGTGGT+TGG + Chr5:15774600-15774619 MsG0580025241.01.T01:intron 45.0%
GAGAAGAACGCAGGAATTGA+AGG + Chr5:15778405-15778424 MsG0580025241.01.T01:CDS 45.0%
GAGCTTATGAAAAGCGATGG+AGG - Chr5:15777614-15777633 None:intergenic 45.0%
GAGGGACGACATAATGCATA+GGG - Chr5:15775560-15775579 None:intergenic 45.0%
GATTTCCTAACACTGTGGGA+GGG + Chr5:15777363-15777382 MsG0580025241.01.T01:intron 45.0%
GCAAACAATCTCCACCCTTT+AGG - Chr5:15773655-15773674 None:intergenic 45.0%
GGAATGGTCAGCAGGTTTAT+TGG + Chr5:15775066-15775085 MsG0580025241.01.T01:CDS 45.0%
GGACATCTAGAAATGCTGCT+AGG + Chr5:15776526-15776545 MsG0580025241.01.T01:intron 45.0%
GGGAAGAAATGAGTGCTTTG+GGG + Chr5:15775365-15775384 MsG0580025241.01.T01:intron 45.0%
GGGGAAGAAATGAGTGCTTT+GGG + Chr5:15775364-15775383 MsG0580025241.01.T01:intron 45.0%
GTGCAAAAATTGTTGGAGGG+CGG + Chr5:15775871-15775890 MsG0580025241.01.T01:intron 45.0%
TAATAAGGGGAGGACTTTGC+AGG - Chr5:15775483-15775502 None:intergenic 45.0%
TGAATATCTACTGAGTGGCC+AGG + Chr5:15776623-15776642 MsG0580025241.01.T01:CDS 45.0%
TGGGGAAGAAATGAGTGCTT+TGG + Chr5:15775363-15775382 MsG0580025241.01.T01:intron 45.0%
TTCACAGCTGGATATGCTCA+AGG + Chr5:15778350-15778369 MsG0580025241.01.T01:CDS 45.0%
TTGTTTGGCAGTGAGAGACT+GGG - Chr5:15775621-15775640 None:intergenic 45.0%
TTTGTTTGGCAGTGAGAGAC+TGG - Chr5:15775622-15775641 None:intergenic 45.0%
! AGAAGGATACTCGAGGGTTT+TGG - Chr5:15777540-15777559 None:intergenic 45.0%
! AGGTTTATTGGTATCGGGCT+TGG + Chr5:15775078-15775097 MsG0580025241.01.T01:CDS 45.0%
! ATGGGTACTGCTGGAAATAG+CGG - Chr5:15776681-15776700 None:intergenic 45.0%
! ATTGGTATCGGGCTTGGTAT+AGG + Chr5:15775084-15775103 MsG0580025241.01.T01:intron 45.0%
! ATTTTCACTGCGTCGAATCC+CGG + Chr5:15773300-15773319 MsG0580025241.01.T01:CDS 45.0%
! ATTTTTGCACTGCTCCAGCA+TGG - Chr5:15775861-15775880 None:intergenic 45.0%
! GCATTGACCTCTTTAACTGG+AGG - Chr5:15776651-15776670 None:intergenic 45.0%
! GCTTCTTTTGTGTCGTGACT+TGG + Chr5:15775147-15775166 MsG0580025241.01.T01:intron 45.0%
! GGCCTTATAATTACGGACAG+AGG + Chr5:15777843-15777862 MsG0580025241.01.T01:intron 45.0%
! GGCTCGGTTGACTATTCAAA+TGG - Chr5:15774167-15774186 None:intergenic 45.0%
! TGCTGTTGGATTAGGGAAAG+GGG + Chr5:15773529-15773548 MsG0580025241.01.T01:CDS 45.0%
! TGGATCAAAAGGTGCAGAAC+CGG - Chr5:15775945-15775964 None:intergenic 45.0%
! TTTTGCTGGTGCTTCTCGAT+CGG + Chr5:15773753-15773772 MsG0580025241.01.T01:CDS 45.0%
!! AAGAAATGAGTGCTTTGGGG+TGG + Chr5:15775368-15775387 MsG0580025241.01.T01:intron 45.0%
!! ACCATTGAGTTGAGTGGTCT+TGG + Chr5:15774277-15774296 MsG0580025241.01.T01:intron 45.0%
!! ACCCGTTTTAACCCTGTTTG+CGG + Chr5:15775969-15775988 MsG0580025241.01.T01:intron 45.0%
!! AGAAATGAGTGCTTTGGGGT+GGG + Chr5:15775369-15775388 MsG0580025241.01.T01:intron 45.0%
!! ATTTTGTTGTCGGATTCGGG+AGG + Chr5:15773614-15773633 MsG0580025241.01.T01:intron 45.0%
!! GGGTGCTGAAAGATGGAATT+GGG + Chr5:15773579-15773598 MsG0580025241.01.T01:CDS 45.0%
!! GTTAGGTTGATGCTACCTGA+AGG + Chr5:15773398-15773417 MsG0580025241.01.T01:intron 45.0%
!! TCGGCATTGACCTCTTTAAC+TGG - Chr5:15776654-15776673 None:intergenic 45.0%
!! TGGGTGCTGAAAGATGGAAT+TGG + Chr5:15773578-15773597 MsG0580025241.01.T01:CDS 45.0%
!! TGGGTTCACCATAATGGACT+AGG + Chr5:15774003-15774022 MsG0580025241.01.T01:intron 45.0%
!! TGTTCAAGGTGTTGCTTGTC+AGG + Chr5:15773472-15773491 MsG0580025241.01.T01:CDS 45.0%
!! TTCTAAGACTGCTGCACCAT+GGG - Chr5:15776477-15776496 None:intergenic 45.0%
!! TTTCTAAGACTGCTGCACCA+TGG - Chr5:15776478-15776497 None:intergenic 45.0%
!!! CAGAGGTTTTGTTTGGGAGT+TGG + Chr5:15775343-15775362 MsG0580025241.01.T01:intron 45.0%
!!! GAGGTTTTGTTTGGGAGTTG+GGG + Chr5:15775345-15775364 MsG0580025241.01.T01:intron 45.0%
AAGTCCGCAGTTGAATGGAC+TGG - Chr5:15775202-15775221 None:intergenic 50.0%
ACACATCTCCAACCCAAACG+CGG - Chr5:15773695-15773714 None:intergenic 50.0%
AGAAGCAAGAACAAGAGGCG+TGG - Chr5:15775133-15775152 None:intergenic 50.0%
AGGAGGAAAGAGAAGGCAGA+GGG - Chr5:15775578-15775597 None:intergenic 50.0%
AGGGATTTGAGGAGAAAGGG+AGG - Chr5:15775598-15775617 None:intergenic 50.0%
ATAGGACTGGGCAACTGCAT+AGG + Chr5:15775102-15775121 MsG0580025241.01.T01:intron 50.0%
ATGACTGCAAACCTGGTGGT+AGG + Chr5:15778442-15778461 MsG0580025241.01.T01:CDS 50.0%
ATTGAAAGCCGTCTGCAGCT+TGG + Chr5:15778079-15778098 MsG0580025241.01.T01:intron 50.0%
CCATGTATGTGCTGCAAAGC+AGG - Chr5:15776019-15776038 None:intergenic 50.0%
CCTGCTTTGCAGCACATACA+TGG + Chr5:15776016-15776035 MsG0580025241.01.T01:intron 50.0%
GAAAGGGAGGAGGAAAGAGA+AGG - Chr5:15775585-15775604 None:intergenic 50.0%
GAACCAAAACCTCCCGATTC+AGG - Chr5:15775520-15775539 None:intergenic 50.0%
GATATTTGCAGCCTACCACC+AGG - Chr5:15778456-15778475 None:intergenic 50.0%
GATTTGAGGAGAAAGGGAGG+AGG - Chr5:15775595-15775614 None:intergenic 50.0%
GCACATGGTTGTTAAGCGTG+CGG + Chr5:15775791-15775810 MsG0580025241.01.T01:intron 50.0%
GGGAGGGATTTGAGGAGAAA+GGG - Chr5:15775601-15775620 None:intergenic 50.0%
GGTTGCAATTGTGCAGCACA+TGG + Chr5:15775776-15775795 MsG0580025241.01.T01:intron 50.0%
GTTCTCTCCATCAACCATGC+TGG + Chr5:15775844-15775863 MsG0580025241.01.T01:intron 50.0%
GTTTGGATCCAAGCTGCAGA+CGG - Chr5:15778090-15778109 None:intergenic 50.0%
TAATAGCTGGGCACAAGGGT+GGG + Chr5:15777897-15777916 MsG0580025241.01.T01:intron 50.0%
TGAAAATGCCGCGTTTGGGT+TGG + Chr5:15773684-15773703 MsG0580025241.01.T01:CDS 50.0%
TGGGAGGGATTTGAGGAGAA+AGG - Chr5:15775602-15775621 None:intergenic 50.0%
TGTGAAGGTGGACCGAATCT+TGG + Chr5:15777013-15777032 MsG0580025241.01.T01:intron 50.0%
TTAATAGCTGGGCACAAGGG+TGG + Chr5:15777896-15777915 MsG0580025241.01.T01:intron 50.0%
TTGAGTTTCCCTGAATCGGG+AGG + Chr5:15775508-15775527 MsG0580025241.01.T01:intron 50.0%
TTGTCAGGTGAGTGGAGTGT+TGG + Chr5:15773487-15773506 MsG0580025241.01.T01:CDS 50.0%
TTTCCTAACACTGTGGGAGG+GGG + Chr5:15777365-15777384 MsG0580025241.01.T01:intron 50.0%
! ATCGGGCTTGGTATAGGACT+GGG + Chr5:15775090-15775109 MsG0580025241.01.T01:intron 50.0%
! TATCGGGCTTGGTATAGGAC+TGG + Chr5:15775089-15775108 MsG0580025241.01.T01:intron 50.0%
! TGCTGCAAAGCAGGTCGTTT+TGG - Chr5:15776010-15776029 None:intergenic 50.0%
! TTCCCTGAATCGGGAGGTTT+TGG + Chr5:15775514-15775533 MsG0580025241.01.T01:intron 50.0%
!! AGGATACTCGAGGGTTTTGG+AGG - Chr5:15777537-15777556 None:intergenic 50.0%
!! GAAATGAGTGCTTTGGGGTG+GGG + Chr5:15775370-15775389 MsG0580025241.01.T01:intron 50.0%
!! GCACCAGCAAAAGCACCAAT+AGG - Chr5:15773745-15773764 None:intergenic 50.0%
!! GCTGCAAAGCAGGTCGTTTT+GGG - Chr5:15776009-15776028 None:intergenic 50.0%
!! GTGCCTATTGGTGCTTTTGC+TGG + Chr5:15773739-15773758 MsG0580025241.01.T01:CDS 50.0%
!!! GGATACTCGAGGGTTTTGGA+GGG - Chr5:15777536-15777555 None:intergenic 50.0%
!!! GGTTTTGGAGGGAAGGGTTT+GGG - Chr5:15777525-15777544 None:intergenic 50.0%
CACTGCTCCAGCATGGTTGA+TGG - Chr5:15775854-15775873 None:intergenic 55.0%
CCAGGCTCCTCCAGTTAAAG+AGG + Chr5:15776641-15776660 MsG0580025241.01.T01:CDS 55.0%
CCTCTTTAACTGGAGGAGCC+TGG - Chr5:15776644-15776663 None:intergenic 55.0%
CTCTTTGGGCTCTTGAGGCT+GGG + Chr5:15776857-15776876 MsG0580025241.01.T01:intron 55.0%
GAGAGACTGGGAGGGATTTG+AGG - Chr5:15775609-15775628 None:intergenic 55.0%
GAGGAGGAAAGAGAAGGCAG+AGG - Chr5:15775579-15775598 None:intergenic 55.0%
TCTCTTTGGGCTCTTGAGGC+TGG + Chr5:15776856-15776875 MsG0580025241.01.T01:intron 55.0%
TCTTTGGGCTCTTGAGGCTG+GGG + Chr5:15776858-15776877 MsG0580025241.01.T01:intron 55.0%
TGCTGGAAATAGCGGCTCCT+CGG - Chr5:15776673-15776692 None:intergenic 55.0%
TTCCTAACACTGTGGGAGGG+GGG + Chr5:15777366-15777385 MsG0580025241.01.T01:intron 55.0%
TTGGAGGGAAGGGTTTGGGA+GGG - Chr5:15777521-15777540 None:intergenic 55.0%
TTGGCAGTGAGAGACTGGGA+GGG - Chr5:15775617-15775636 None:intergenic 55.0%
TTTGGAGGGAAGGGTTTGGG+AGG - Chr5:15777522-15777541 None:intergenic 55.0%
TTTGGCAGTGAGAGACTGGG+AGG - Chr5:15775618-15775637 None:intergenic 55.0%
!! GGTGTTGCTTGTCAGGTGAG+TGG + Chr5:15773479-15773498 MsG0580025241.01.T01:CDS 55.0%
!! TAGATAGGGGGTGTCCTGCA+TGG - Chr5:15777582-15777601 None:intergenic 55.0%
!! TTGCCGGTTTCGCTGCTCAA+AGG + Chr5:15774807-15774826 MsG0580025241.01.T01:CDS 55.0%
!!! ACTCGAGGGTTTTGGAGGGA+AGG - Chr5:15777532-15777551 None:intergenic 55.0%
!!! CTCGAGGGTTTTGGAGGGAA+GGG - Chr5:15777531-15777550 None:intergenic 55.0%
!!! GGGTTTTGGAGGGAAGGGTT+TGG - Chr5:15777526-15777545 None:intergenic 55.0%
AACCCCCCTCCCACAGTGTT+AGG - Chr5:15777371-15777390 None:intergenic 60.0%
GCTCTTGAGGCTGGGGTCAT+GGG + Chr5:15776865-15776884 MsG0580025241.01.T01:intron 60.0%
TGTTGGAGGGCGGCACACAA+AGG + Chr5:15775881-15775900 MsG0580025241.01.T01:intron 60.0%
TTCACGCACCCCAACCACAC+AGG - Chr5:15774613-15774632 None:intergenic 60.0%
TTGGAGGGGAGGGGAATGGA+GGG + Chr5:15777391-15777410 MsG0580025241.01.T01:intron 60.0%
TTTGGAGGGGAGGGGAATGG+AGG + Chr5:15777390-15777409 MsG0580025241.01.T01:intron 60.0%
! ACACTGTGGGAGGGGGGTTT+TGG + Chr5:15777372-15777391 MsG0580025241.01.T01:intron 60.0%
!! AGTGCTTTGGGGTGGGGAGT+GGG + Chr5:15775376-15775395 MsG0580025241.01.T01:intron 60.0%
!!! GGTTTTGGAGGGGAGGGGAA+TGG + Chr5:15777387-15777406 MsG0580025241.01.T01:intron 60.0%
!!! TGTGGGAGGGGGGTTTTGGA+GGG + Chr5:15777376-15777395 MsG0580025241.01.T01:intron 60.0%
AGGGAAGGGTTTGGGAGGGC+TGG - Chr5:15777517-15777536 None:intergenic 65.0%
GGCTCTTGAGGCTGGGGTCA+TGG + Chr5:15776864-15776883 MsG0580025241.01.T01:intron 65.0%
GGGAAGGGTTTGGGAGGGCT+GGG - Chr5:15777516-15777535 None:intergenic 65.0%
! TTTGGGGTGGGGAGTGGGAG+GGG + Chr5:15775381-15775400 MsG0580025241.01.T01:intron 65.0%
!! CTGTGGGAGGGGGGTTTTGG+AGG + Chr5:15777375-15777394 MsG0580025241.01.T01:intron 65.0%
!! CTTTGGGGTGGGGAGTGGGA+GGG + Chr5:15775380-15775399 MsG0580025241.01.T01:intron 65.0%
!! GAGTGCTTTGGGGTGGGGAG+TGG + Chr5:15775375-15775394 MsG0580025241.01.T01:intron 65.0%
!!! AGGGGGGTTTTGGAGGGGAG+GGG + Chr5:15777382-15777401 MsG0580025241.01.T01:intron 65.0%
!!! GAGGGGGGTTTTGGAGGGGA+GGG + Chr5:15777381-15777400 MsG0580025241.01.T01:intron 65.0%
!!! GTGGGAGGGGGGTTTTGGAG+GGG + Chr5:15777377-15777396 MsG0580025241.01.T01:intron 65.0%
!! GCTTTGGGGTGGGGAGTGGG+AGG + Chr5:15775379-15775398 MsG0580025241.01.T01:intron 70.0%
!!! GGAGGGGGGTTTTGGAGGGG+AGG + Chr5:15777380-15777399 MsG0580025241.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 15773192 15778536 15773192 ID=MsG0580025241.01;Name=MsG0580025241.01
Chr5 mRNA 15773192 15778536 15773192 ID=MsG0580025241.01.T01;Parent=MsG0580025241.01;Name=MsG0580025241.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0.33|0.42|1|1|1|7|0|274
Chr5 exon 15773192 15773321 15773192 ID=MsG0580025241.01.T01:exon:30166;Parent=MsG0580025241.01.T01
Chr5 exon 15773471 15773600 15773471 ID=MsG0580025241.01.T01:exon:30167;Parent=MsG0580025241.01.T01
Chr5 exon 15773666 15773792 15773666 ID=MsG0580025241.01.T01:exon:30168;Parent=MsG0580025241.01.T01
Chr5 exon 15774785 15774841 15774785 ID=MsG0580025241.01.T01:exon:30169;Parent=MsG0580025241.01.T01
Chr5 exon 15775042 15775099 15775042 ID=MsG0580025241.01.T01:exon:30170;Parent=MsG0580025241.01.T01
Chr5 exon 15776610 15776725 15776610 ID=MsG0580025241.01.T01:exon:30171;Parent=MsG0580025241.01.T01
Chr5 exon 15778330 15778536 15778330 ID=MsG0580025241.01.T01:exon:30172;Parent=MsG0580025241.01.T01
Chr5 CDS 15773192 15773321 15773192 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Chr5 CDS 15773471 15773600 15773471 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Chr5 CDS 15773666 15773792 15773666 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Chr5 CDS 15774785 15774841 15774785 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Chr5 CDS 15775042 15775099 15775042 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Chr5 CDS 15776610 15776725 15776610 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Chr5 CDS 15778330 15778536 15778330 ID=MsG0580025241.01.T01:cds;Parent=MsG0580025241.01.T01
Gene Sequence

>MsG0580025241.01.T01

ATGGCAAAAAACCGTTCTTTATCATCTGAAAATGAAATTTTGACCCAACCCATTTACGAAGTCAAAGGTGGAAACTTGATTAGGCTATTCCCTGATAATTTGAAAGATATTTTCACTGCGTCGAATCCCGGTGTTCAAGGTGTTGCTTGTCAGGTGAGTGGAGTGTTGGCAACTCAAGCTTTGCTTTATGCTGTTGGATTAGGGAAAGGGGCTATTCCTACTGCTGCTGCTATTAATTGGGTGCTGAAAGATGGAATTGGATTGTTTGCTGATCTTCTTGAAAATGCCGCGTTTGGGTTGGAGATGTGTACTCCTGCTTTTCCTCATTTGTTTGTGCCTATTGGTGCTTTTGCTGGTGCTTCTCGATCGGCTGCTTCTTTGATTCAGGCTTCTACTAGGAGTTGTTTCTTTGCCGGTTTCGCTGCTCAAAGGAATTTTGCTGAGGTAATTGCTAAAGGTGAAGTTCAAGGAATGGTCAGCAGGTTTATTGGTATCGGGCTTGGTTTGGTTTTCAGTGAATATCTACTGAGTGGCCAGGCTCCTCCAGTTAAAGAGGTCAATGCCGAGGAGCCGCTATTTCCAGCAGTACCCATATTAAATGCACCTTTTGCAAACAAAGTGGTGCTTAAAGAAACTTGTTCACAGCTGGATATGCTCAAGGCATTGTTTCAGGTCAACTATCTTTATTGGTTAGAGAAGAACGCAGGAATTGAAGGTAGAGGAACCCTTTATGACTGCAAACCTGGTGGTAGGCTGCAAATATCTCTAGAATATGCGGAAAGGGAATTCAATCATGTTAGAGATGATGGAGAATCAGTTGGTTGA
Protein sequence

>MsG0580025241.01.T01

MAKNRSLSSENEILTQPIYEVKGGNLIRLFPDNLKDIFTASNPGVQGVACQVSGVLATQALLYAVGLGKGAIPTAAAINWVLKDGIGLFADLLENAAFGLEMCTPAFPHLFVPIGAFAGASRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMVSRFIGIGLGLVFSEYLLSGQAPPVKEVNAEEPLFPAVPILNAPFANKVVLKETCSQLDMLKALFQVNYLYWLEKNAGIEGRGTLYDCKPGGRLQISLEYAEREFNHVRDDGESVG*