Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005962.01.T01 | XP_013470174.1 | 95.706 | 163 | 4 | 1 | 1 | 163 | 1 | 160 | 3.59E-103 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005962.01.T01 | A0A072VQY7 | 95.706 | 163 | 4 | 1 | 1 | 163 | 1 | 160 | 1.72e-103 | 302 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000139.01 | MsG0180005962.01 | -0.833403 | 5.441838e-56 | 6.260415e-53 |
| MsG0180000155.01 | MsG0180005962.01 | -0.831927 | 1.264977e-55 | 1.392892e-52 |
| MsG0180000331.01 | MsG0180005962.01 | -0.833106 | 6.453431e-56 | 7.358885e-53 |
| MsG0180000334.01 | MsG0180005962.01 | -0.816582 | 5.135415e-52 | 3.653125e-49 |
| MsG0180000836.01 | MsG0180005962.01 | -0.808012 | 3.816762e-50 | 2.157980e-47 |
| MsG0180002547.01 | MsG0180005962.01 | -0.809525 | 1.812724e-50 | 1.066757e-47 |
| MsG0180002973.01 | MsG0180005962.01 | -0.816796 | 4.598196e-52 | 3.290138e-49 |
| MsG0180003094.01 | MsG0180005962.01 | -0.813146 | 2.967335e-51 | 1.922317e-48 |
| MsG0180003493.01 | MsG0180005962.01 | -0.851359 | 9.341988e-61 | 1.886293e-57 |
| MsG0180003548.01 | MsG0180005962.01 | -0.823632 | 1.247424e-53 | 1.080045e-50 |
| MsG0180003651.01 | MsG0180005962.01 | -0.814855 | 1.245566e-51 | 8.451990e-49 |
| MsG0180003786.01 | MsG0180005962.01 | -0.803929 | 2.756596e-49 | 1.402969e-46 |
| MsG0180003793.01 | MsG0180005962.01 | -0.809488 | 1.845754e-50 | 1.085118e-47 |
| MsG0180003920.01 | MsG0180005962.01 | -0.811262 | 7.646374e-51 | 4.711110e-48 |
| MsG0180003932.01 | MsG0180005962.01 | -0.800540 | 1.373898e-48 | 6.413729e-46 |
| MsG0180004062.01 | MsG0180005962.01 | -0.807176 | 5.744375e-50 | 3.177778e-47 |
| MsG0180004481.01 | MsG0180005962.01 | -0.802701 | 4.951432e-49 | 2.441816e-46 |
| MsG0180004482.01 | MsG0180005962.01 | -0.800328 | 1.517343e-48 | 7.045713e-46 |
| MsG0180004605.01 | MsG0180005962.01 | 0.825482 | 4.577064e-54 | 4.176915e-51 |
| MsG0180004854.01 | MsG0180005962.01 | -0.821255 | 4.448979e-53 | 3.600971e-50 |
| MsG0180005049.01 | MsG0180005962.01 | -0.839724 | 1.334870e-57 | 1.859597e-54 |
| MsG0180005530.01 | MsG0180005962.01 | -0.847486 | 1.121479e-59 | 1.996513e-56 |
| MsG0180005575.01 | MsG0180005962.01 | -0.836907 | 7.104833e-57 | 9.080786e-54 |
| MsG0180005746.01 | MsG0180005962.01 | -0.853384 | 2.476232e-61 | 5.340701e-58 |
| MsG0180005962.01 | MsG0180006024.01 | -0.802380 | 5.766507e-49 | 2.820732e-46 |
| MsG0180005962.01 | MsG0280006422.01 | -0.814065 | 1.862355e-51 | 1.237067e-48 |
| MsG0180005962.01 | MsG0280006993.01 | -0.814712 | 1.339681e-51 | 9.055917e-49 |
| MsG0180005962.01 | MsG0280007067.01 | -0.817285 | 3.569173e-52 | 2.588327e-49 |
| MsG0180005962.01 | MsG0280007196.01 | -0.801744 | 7.793241e-49 | 3.750491e-46 |
| MsG0180005962.01 | MsG0280007226.01 | -0.843390 | 1.442882e-58 | 2.254376e-55 |
| MsG0180005962.01 | MsG0280007452.01 | -0.840650 | 7.650644e-58 | 1.096938e-54 |
| MsG0180005962.01 | MsG0280007506.01 | -0.828218 | 1.015904e-54 | 1.003332e-51 |
| MsG0180005962.01 | MsG0280007527.01 | -0.820775 | 5.738397e-53 | 4.583094e-50 |
| MsG0180005962.01 | MsG0280008614.01 | -0.829695 | 4.457792e-55 | 4.597186e-52 |
| MsG0180005962.01 | MsG0280009794.01 | -0.841677 | 4.111310e-58 | 6.085639e-55 |
| MsG0180005962.01 | MsG0280010776.01 | -0.807088 | 5.996848e-50 | 3.309746e-47 |
| MsG0180005962.01 | MsG0280011014.01 | -0.821866 | 3.214634e-53 | 2.647188e-50 |
| MsG0180005962.01 | MsG0280011339.01 | -0.811561 | 6.581662e-51 | 4.087424e-48 |
| MsG0180005962.01 | MsG0280011388.01 | -0.819797 | 9.617383e-53 | 7.475807e-50 |
| MsG0180005962.01 | MsG0380013641.01 | -0.836346 | 9.874824e-57 | 1.241142e-53 |
| MsG0180005962.01 | MsG0380015435.01 | -0.815080 | 1.110187e-51 | 7.579335e-49 |
| MsG0180005962.01 | MsG0380015463.01 | -0.804698 | 1.906423e-49 | 9.895873e-47 |
| MsG0180005962.01 | MsG0380015598.01 | 0.825662 | 4.147824e-54 | 3.804952e-51 |
| MsG0180005962.01 | MsG0380016005.01 | -0.855871 | 4.714888e-62 | 1.104301e-58 |
| MsG0180005962.01 | MsG0380016126.01 | -0.811280 | 7.574501e-51 | 4.669011e-48 |
| MsG0180005962.01 | MsG0380016131.01 | -0.808941 | 2.418377e-50 | 1.401104e-47 |
| MsG0180005962.01 | MsG0380016247.01 | -0.840098 | 1.066768e-57 | 1.503757e-54 |
| MsG0180005962.01 | MsG0380016505.01 | -0.820870 | 5.457902e-53 | 4.370901e-50 |
| MsG0180005962.01 | MsG0380016671.01 | -0.810816 | 9.551213e-51 | 5.815722e-48 |
| MsG0180005962.01 | MsG0380016778.01 | -0.801410 | 9.123820e-49 | 4.354054e-46 |
| MsG0180005962.01 | MsG0380018033.01 | -0.814868 | 1.237383e-51 | 8.399253e-49 |
| MsG0180005962.01 | MsG0480018278.01 | -0.859876 | 3.053815e-63 | 8.188677e-60 |
| MsG0180005962.01 | MsG0480018477.01 | -0.812522 | 4.063474e-51 | 2.589462e-48 |
| MsG0180005962.01 | MsG0480018894.01 | -0.849706 | 2.721329e-60 | 5.203844e-57 |
| MsG0180005962.01 | MsG0480019710.01 | -0.807059 | 6.081921e-50 | 3.354253e-47 |
| MsG0180005962.01 | MsG0480020675.01 | -0.825757 | 3.938717e-54 | 3.622928e-51 |
| MsG0180005962.01 | MsG0480020780.01 | -0.806649 | 7.424144e-50 | 4.051092e-47 |
| MsG0180005962.01 | MsG0480021037.01 | -0.814797 | 1.283075e-51 | 8.692979e-49 |
| MsG0180005962.01 | MsG0480021077.01 | 0.813448 | 2.546678e-51 | 1.663621e-48 |
| MsG0180005962.01 | MsG0480021448.01 | -0.803625 | 3.187514e-49 | 1.609521e-46 |
| MsG0180005962.01 | MsG0480021706.01 | -0.815273 | 1.005987e-51 | 6.904417e-49 |
| MsG0180005962.01 | MsG0480022514.01 | -0.824740 | 6.851317e-54 | 6.122344e-51 |
| MsG0180005962.01 | MsG0480022549.01 | -0.802351 | 5.847762e-49 | 2.858243e-46 |
| MsG0180005962.01 | MsG0480022586.01 | -0.809497 | 1.837727e-50 | 1.080663e-47 |
| MsG0180005962.01 | MsG0480022672.01 | -0.802858 | 4.594390e-49 | 2.274784e-46 |
| MsG0180005962.01 | MsG0480022960.01 | -0.800500 | 1.400218e-48 | 6.529869e-46 |
| MsG0180005962.01 | MsG0480023221.01 | -0.835608 | 1.520047e-56 | 1.868191e-53 |
| MsG0180005962.01 | MsG0480023387.01 | -0.801552 | 8.530730e-49 | 4.085659e-46 |
| MsG0180005962.01 | MsG0480023463.01 | -0.816458 | 5.473047e-52 | 3.879986e-49 |
| MsG0180005962.01 | MsG0480023639.01 | -0.840440 | 8.683965e-58 | 1.237045e-54 |
| MsG0180005962.01 | MsG0580024197.01 | -0.800530 | 1.380497e-48 | 6.442805e-46 |
| MsG0180005962.01 | MsG0580024619.01 | -0.818934 | 1.512444e-52 | 1.147886e-49 |
| MsG0180005962.01 | MsG0580025241.01 | -0.811515 | 6.737369e-51 | 4.179074e-48 |
| MsG0180005962.01 | MsG0580025268.01 | -0.806861 | 6.696701e-50 | 3.674582e-47 |
| MsG0180005962.01 | MsG0580025357.01 | 0.807570 | 4.738685e-50 | 2.648325e-47 |
| MsG0180005962.01 | MsG0580026059.01 | -0.820186 | 7.834602e-53 | 6.156264e-50 |
| MsG0180005962.01 | MsG0580027431.01 | -0.805298 | 1.427899e-49 | 7.527268e-47 |
| MsG0180005962.01 | MsG0580027925.01 | -0.802709 | 4.933810e-49 | 2.433550e-46 |
| MsG0180005962.01 | MsG0580027999.01 | -0.813958 | 1.966149e-51 | 1.302194e-48 |
| MsG0180005962.01 | MsG0580029127.01 | -0.834797 | 2.434919e-56 | 2.920470e-53 |
| MsG0180005962.01 | MsG0580029729.01 | -0.825538 | 4.439842e-54 | 4.058276e-51 |
| MsG0180005962.01 | MsG0680030350.01 | -0.814053 | 1.874309e-51 | 1.244538e-48 |
| MsG0180005962.01 | MsG0680030865.01 | -0.861682 | 8.642998e-64 | 2.465166e-60 |
| MsG0180005962.01 | MsG0680031506.01 | -0.803358 | 3.620790e-49 | 1.815725e-46 |
| MsG0180005962.01 | MsG0680031507.01 | -0.823083 | 1.676571e-53 | 1.429287e-50 |
| MsG0180005962.01 | MsG0680031628.01 | -0.858031 | 1.088913e-62 | 2.741436e-59 |
| MsG0180005962.01 | MsG0680031762.01 | -0.803604 | 3.220258e-49 | 1.625227e-46 |
| MsG0180005962.01 | MsG0680034497.01 | -0.824671 | 7.112393e-54 | 6.343301e-51 |
| MsG0180005962.01 | MsG0680035876.01 | -0.802011 | 6.868748e-49 | 3.328169e-46 |
| MsG0180005962.01 | MsG0680035888.01 | -0.867584 | 1.228409e-65 | 4.311206e-62 |
| MsG0180005962.01 | MsG0780035979.01 | -0.807201 | 5.675279e-50 | 3.141609e-47 |
| MsG0180005962.01 | MsG0780036075.01 | -0.805167 | 1.521592e-49 | 7.994125e-47 |
| MsG0180005962.01 | MsG0780036297.01 | -0.800204 | 1.608641e-48 | 7.445655e-46 |
| MsG0180005962.01 | MsG0780036815.01 | -0.800852 | 1.186719e-48 | 5.584188e-46 |
| MsG0180005962.01 | MsG0780037093.01 | -0.837752 | 4.318709e-57 | 5.665033e-54 |
| MsG0180005962.01 | MsG0780037240.01 | -0.830422 | 2.962625e-55 | 3.119867e-52 |
| MsG0180005962.01 | MsG0780038400.01 | -0.833233 | 5.999565e-56 | 6.866793e-53 |
| MsG0180005962.01 | MsG0780038603.01 | -0.826715 | 2.329840e-54 | 2.202205e-51 |
| MsG0180005962.01 | MsG0780038910.01 | 0.800452 | 1.432014e-48 | 6.670054e-46 |
| MsG0180005962.01 | MsG0780039307.01 | -0.801246 | 9.857155e-49 | 4.684773e-46 |
| MsG0180005962.01 | MsG0780040529.01 | -0.827253 | 1.732720e-54 | 1.663862e-51 |
| MsG0180005962.01 | MsG0780040926.01 | -0.808751 | 2.655422e-50 | 1.530733e-47 |
| MsG0180005962.01 | MsG0780041223.01 | -0.812618 | 3.872284e-51 | 2.473782e-48 |
| MsG0180005962.01 | MsG0780041268.01 | -0.809901 | 1.504448e-50 | 8.942070e-48 |
| MsG0180005962.01 | MsG0780041423.01 | -0.800692 | 1.279103e-48 | 5.994234e-46 |
| MsG0180005962.01 | MsG0780041699.01 | -0.807825 | 4.182288e-50 | 2.353051e-47 |
| MsG0180005962.01 | MsG0880042544.01 | -0.848519 | 5.821412e-60 | 1.071199e-56 |
| MsG0180005962.01 | MsG0880043944.01 | -0.814017 | 1.908100e-51 | 1.265822e-48 |
| MsG0180005962.01 | MsG0880044067.01 | -0.810643 | 1.040688e-50 | 6.307635e-48 |
| MsG0180005962.01 | MsG0880044555.01 | -0.817718 | 2.851402e-52 | 2.092562e-49 |
| MsG0180005962.01 | MsG0880044782.01 | -0.827401 | 1.596754e-54 | 1.540021e-51 |
| MsG0180005962.01 | MsG0880045145.01 | -0.801556 | 8.517336e-49 | 4.079620e-46 |
| MsG0180005962.01 | MsG0880045294.01 | -0.851695 | 7.503585e-61 | 1.531383e-57 |
| MsG0180005962.01 | MsG0880045433.01 | 0.818808 | 1.615457e-52 | 1.221614e-49 |
| MsG0180005962.01 | MsG0880045483.01 | -0.801527 | 8.632764e-49 | 4.131976e-46 |
| MsG0180005962.01 | MsG0880045838.01 | -0.817593 | 3.043019e-52 | 2.225461e-49 |
| MsG0180005962.01 | MsG0880046284.01 | -0.800034 | 1.741938e-48 | 8.028001e-46 |
| MsG0180005962.01 | MsG0880046349.01 | 0.813650 | 2.299291e-51 | 1.510213e-48 |
| MsG0180005962.01 | MsG0880047473.01 | -0.808876 | 2.496287e-50 | 1.443752e-47 |
| MsG0180005962.01 | MsG0880047611.01 | 0.800739 | 1.251405e-48 | 5.871500e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005962.01.T01 | MTR_1g110760 | 95.706 | 163 | 4 | 1 | 1 | 163 | 1 | 160 | 4.35e-107 | 302 |
| MsG0180005962.01.T01 | MTR_6g018430 | 46.584 | 161 | 66 | 6 | 4 | 163 | 27 | 168 | 3.53e-35 | 120 |
| MsG0180005962.01.T01 | MTR_8g104210 | 45.399 | 163 | 68 | 8 | 7 | 163 | 16 | 163 | 4.92e-28 | 102 |
| MsG0180005962.01.T01 | MTR_8g104210 | 45.399 | 163 | 68 | 8 | 7 | 163 | 25 | 172 | 7.32e-28 | 102 |
| MsG0180005962.01.T01 | MTR_6g084470 | 45.122 | 164 | 68 | 7 | 5 | 163 | 21 | 167 | 5.95e-26 | 97.4 |
| MsG0180005962.01.T01 | MTR_1g051170 | 38.931 | 131 | 60 | 4 | 26 | 149 | 31 | 148 | 5.71e-13 | 63.2 |
| MsG0180005962.01.T01 | MTR_4g087400 | 40.800 | 125 | 57 | 4 | 26 | 149 | 27 | 135 | 2.17e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005962.01.T01 | AT1G68490 | 59.756 | 164 | 53 | 6 | 4 | 163 | 29 | 183 | 2.31e-49 | 157 |
| MsG0180005962.01.T01 | AT1G13390 | 52.469 | 162 | 65 | 5 | 4 | 163 | 25 | 176 | 1.60e-41 | 137 |
| MsG0180005962.01.T01 | AT1G13390 | 52.469 | 162 | 65 | 5 | 4 | 163 | 25 | 176 | 1.60e-41 | 137 |
| MsG0180005962.01.T01 | AT5G16110 | 51.515 | 165 | 66 | 7 | 4 | 163 | 89 | 244 | 8.10e-36 | 124 |
| MsG0180005962.01.T01 | AT3G02555 | 46.296 | 162 | 56 | 5 | 5 | 163 | 29 | 162 | 3.11e-27 | 100 |
| MsG0180005962.01.T01 | AT3G02555 | 46.296 | 162 | 56 | 5 | 5 | 163 | 29 | 162 | 3.11e-27 | 100 |
Find 100 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCGGATTGTTACCAAAAT+TGG | 0.118190 | 1:-98156211 | None:intergenic |
| TTGCAGATTGAGGGTTAATT+TGG | 0.190437 | 1:+98156556 | MsG0180005962.01.T01:three_prime_UTR |
| GGATGTGTTCGGGCCAATTT+TGG | 0.234336 | 1:+98156198 | MsG0180005962.01.T01:CDS |
| AGCTACGGGATAAGGAATTT+TGG | 0.240607 | 1:+98156383 | MsG0180005962.01.T01:three_prime_UTR |
| AGACACTAGTACAAGAAATA+AGG | 0.256941 | 1:-98156590 | None:intergenic |
| TGTAAGTAGAAGAGTCATTA+GGG | 0.322886 | 1:+98156640 | MsG0180005962.01.T01:three_prime_UTR |
| TTGTAACTACCGGCTTAAAA+AGG | 0.335635 | 1:+98156713 | MsG0180005962.01.T01:three_prime_UTR |
| AGTCCGACACGGCGGGGCTT+AGG | 0.339729 | 1:-98155483 | None:intergenic |
| AGTAGCTAACCCACTAATTC+AGG | 0.341828 | 1:+98156065 | MsG0180005962.01.T01:CDS |
| GTCAATAGTGTCTCTTGTTT+AGG | 0.345549 | 1:+98156501 | MsG0180005962.01.T01:three_prime_UTR |
| TTGTAAGTAGAAGAGTCATT+AGG | 0.348876 | 1:+98156639 | MsG0180005962.01.T01:three_prime_UTR |
| CTTATCCCGTAGCTCTTATA+TGG | 0.352258 | 1:-98156374 | None:intergenic |
| TAATTCAGGATGCTCGATTC+GGG | 0.363565 | 1:+98156079 | MsG0180005962.01.T01:CDS |
| CCTCCCTTCCTTGCAGAAGA+TGG | 0.393816 | 1:-98156177 | None:intergenic |
| CTAATTCAGGATGCTCGATT+CGG | 0.401608 | 1:+98156078 | MsG0180005962.01.T01:CDS |
| CATATAAGAGCTACGGGATA+AGG | 0.402512 | 1:+98156375 | MsG0180005962.01.T01:three_prime_UTR |
| AGAAGGTGGCAGACCGGATG+GGG | 0.404001 | 1:-98156151 | None:intergenic |
| GTGACTAAATAATGCGGTTA+AGG | 0.406349 | 1:+98156533 | MsG0180005962.01.T01:three_prime_UTR |
| GAGCAGGGATGCTGCAATTA+CGG | 0.410027 | 1:-98156272 | None:intergenic |
| CGCCCCTCTCACCGTCGTCA+TGG | 0.419708 | 1:+98156115 | MsG0180005962.01.T01:CDS |
| GTCCGACACGGCGGGGCTTA+GGG | 0.420772 | 1:-98155482 | None:intergenic |
| TGCAGATTGAGGGTTAATTT+GGG | 0.421481 | 1:+98156557 | MsG0180005962.01.T01:three_prime_UTR |
| CAAGGAAGGGAGGATGTGTT+CGG | 0.421741 | 1:+98156187 | MsG0180005962.01.T01:CDS |
| GATCCTTCCGGTGGCATCTC+AGG | 0.425952 | 1:+98155538 | MsG0180005962.01.T01:CDS |
| GACACTAGTACAAGAAATAA+GGG | 0.430863 | 1:-98156589 | None:intergenic |
| CTCCCTTCCTTGCAGAAGAT+GGG | 0.432493 | 1:-98156176 | None:intergenic |
| TAGTTACAATTACAATTCAT+AGG | 0.433568 | 1:-98156699 | None:intergenic |
| GGTGGAACTGCAAGCAAGCT+TGG | 0.435280 | 1:-98154722 | None:intergenic |
| AAGGATTCGATTGCCTTGAC+AGG | 0.436802 | 1:+98156244 | MsG0180005962.01.T01:CDS |
| CGGTTAAGGTTGCAGATTGA+GGG | 0.439951 | 1:+98156547 | MsG0180005962.01.T01:three_prime_UTR |
| TAATTGCAGCATCCCTGCTC+TGG | 0.448656 | 1:+98156275 | MsG0180005962.01.T01:CDS |
| GCCCCTCTCACCGTCGTCAT+GGG | 0.457309 | 1:+98156116 | MsG0180005962.01.T01:CDS |
| GGAGAAGGTGGCAGACCGGA+TGG | 0.458776 | 1:-98156153 | None:intergenic |
| GTGGAACTGCAAGCAAGCTT+GGG | 0.463428 | 1:-98154721 | None:intergenic |
| CTCATCTGCGTCAAATCCCT+TGG | 0.463633 | 1:+98155687 | MsG0180005962.01.T01:CDS |
| GGTGGCAGACCGGATGGGGC+AGG | 0.466438 | 1:-98156147 | None:intergenic |
| TGCCCTAAGCCCCGCCGTGT+CGG | 0.473384 | 1:+98155480 | MsG0180005962.01.T01:CDS |
| CTGTTGTTCTAAGCCAGAGC+AGG | 0.481278 | 1:-98156288 | None:intergenic |
| TAGAAGAAATGAAGAGGTGC+AGG | 0.484324 | 1:-98154743 | None:intergenic |
| GAGAAGGTGGCAGACCGGAT+GGG | 0.484866 | 1:-98156152 | None:intergenic |
| ACTACCCTAGCAGATCCTTC+CGG | 0.492449 | 1:+98155526 | MsG0180005962.01.T01:CDS |
| GTGGTGGTTCCTGCCCCATC+CGG | 0.495940 | 1:+98156138 | MsG0180005962.01.T01:CDS |
| TTGAATCACACGGTTCAACT+TGG | 0.496164 | 1:-98155663 | None:intergenic |
| GTTGAGGAGTCCGACACGGC+GGG | 0.496709 | 1:-98155490 | None:intergenic |
| AATGAAAGAAGAAAGTAAAG+AGG | 0.505532 | 1:-98154780 | None:intergenic |
| GTAGAAGAGTCATTAGGGGA+TGG | 0.509141 | 1:+98156645 | MsG0180005962.01.T01:three_prime_UTR |
| GCGGTTAAGGTTGCAGATTG+AGG | 0.511423 | 1:+98156546 | MsG0180005962.01.T01:three_prime_UTR |
| CTCACCGTCGTCATGGGTGG+TGG | 0.513742 | 1:+98156122 | MsG0180005962.01.T01:CDS |
| TGAATTGTAATTGTAACTAC+CGG | 0.527904 | 1:+98156703 | MsG0180005962.01.T01:three_prime_UTR |
| GAATTTACTGTACAAAGCTA+TGG | 0.531959 | 1:-98154830 | None:intergenic |
| CCACCCATGACGACGGTGAG+AGG | 0.533000 | 1:-98156119 | None:intergenic |
| CAAAGTTACAAACAAGAGGA+TGG | 0.534199 | 1:-98156619 | None:intergenic |
| AATCCGGCGGTGAGAGTCGA+AGG | 0.545936 | 1:+98156225 | MsG0180005962.01.T01:CDS |
| TCCCTTCCTTGCAGAAGATG+GGG | 0.546203 | 1:-98156175 | None:intergenic |
| AGAAAATAAAATTTCGACGA+AGG | 0.547595 | 1:+98155430 | MsG0180005962.01.T01:five_prime_UTR |
| AATCGAGCATCCTGAATTAG+TGG | 0.550154 | 1:-98156075 | None:intergenic |
| CAACCACCATATAAGAGCTA+CGG | 0.552833 | 1:+98156368 | MsG0180005962.01.T01:three_prime_UTR |
| AGTCGTTGACGGCGAAGTTG+AGG | 0.554697 | 1:-98155506 | None:intergenic |
| AACCACCATATAAGAGCTAC+GGG | 0.555576 | 1:+98156369 | MsG0180005962.01.T01:three_prime_UTR |
| TCTGCTAGGGTAGTCGTTGA+CGG | 0.561042 | 1:-98155517 | None:intergenic |
| CACCCATGACGACGGTGAGA+GGG | 0.562391 | 1:-98156118 | None:intergenic |
| TTGGATGTCCTAGTTTGAAG+AGG | 0.567788 | 1:+98156402 | MsG0180005962.01.T01:three_prime_UTR |
| AAGGAAGGGAGGATGTGTTC+GGG | 0.568345 | 1:+98156188 | MsG0180005962.01.T01:CDS |
| TTGGTGAGAATTGTGTCCAA+GGG | 0.586012 | 1:-98155703 | None:intergenic |
| CTTACAAAGTTACAAACAAG+AGG | 0.586457 | 1:-98156623 | None:intergenic |
| CCTCTCACCGTCGTCATGGG+TGG | 0.588491 | 1:+98156119 | MsG0180005962.01.T01:CDS |
| ATCCCGTAGCTCTTATATGG+TGG | 0.589075 | 1:-98156371 | None:intergenic |
| CTTGGTGAGAATTGTGTCCA+AGG | 0.590478 | 1:-98155704 | None:intergenic |
| GCAGGATGATGATTGTGATA+CGG | 0.592153 | 1:+98155978 | MsG0180005962.01.T01:intron |
| AGTGGGTTAGCTACTCTGCT+CGG | 0.596257 | 1:-98156057 | None:intergenic |
| AGGATTCGATTGCCTTGACA+GGG | 0.597575 | 1:+98156245 | MsG0180005962.01.T01:CDS |
| CCATCTTCTGCAAGGAAGGG+AGG | 0.605126 | 1:+98156177 | MsG0180005962.01.T01:CDS |
| CCCTTCCTTGCAGAAGATGG+GGG | 0.610451 | 1:-98156174 | None:intergenic |
| ACCCATGACGACGGTGAGAG+GGG | 0.613698 | 1:-98156117 | None:intergenic |
| AATCCTTCGACTCTCACCGC+CGG | 0.616188 | 1:-98156228 | None:intergenic |
| CAGTAAATTCATTCAACACA+AGG | 0.616519 | 1:+98154843 | MsG0180005962.01.T01:five_prime_UTR |
| TTTCGACGAAGGAAGATGAA+CGG | 0.620932 | 1:+98155441 | MsG0180005962.01.T01:exon |
| AATTACGGCTGTCCCTGTCA+AGG | 0.629306 | 1:-98156257 | None:intergenic |
| ATCGAGCATCCTGAATTAGT+GGG | 0.630666 | 1:-98156074 | None:intergenic |
| GGCGGCGACGAGGCTACTGG+AGG | 0.632101 | 1:-98156012 | None:intergenic |
| GCCACCGGAAGGATCTGCTA+GGG | 0.633729 | 1:-98155530 | None:intergenic |
| TGCCACCGGAAGGATCTGCT+AGG | 0.633861 | 1:-98155531 | None:intergenic |
| AAATTCACCTGAGATGCCAC+CGG | 0.634810 | 1:-98155545 | None:intergenic |
| AAGAAATGAAGAGGTGCAGG+TGG | 0.635822 | 1:-98154740 | None:intergenic |
| TCACCTGAGATGCCACCGGA+AGG | 0.642394 | 1:-98155541 | None:intergenic |
| CGAAGTTGAGGAGTCCGACA+CGG | 0.647237 | 1:-98155494 | None:intergenic |
| GGAACCACCACCCATGACGA+CGG | 0.659927 | 1:-98156126 | None:intergenic |
| GCAGATGAGTTTGAATCACA+CGG | 0.662013 | 1:-98155673 | None:intergenic |
| TGTTGTTCTAAGCCAGAGCA+GGG | 0.670625 | 1:-98156287 | None:intergenic |
| AATTCAGGATGCTCGATTCG+GGG | 0.678593 | 1:+98156080 | MsG0180005962.01.T01:CDS |
| ACCCTAGCAGATCCTTCCGG+TGG | 0.681239 | 1:+98155529 | MsG0180005962.01.T01:CDS |
| TATATAGTGACTAAATAATG+CGG | 0.682777 | 1:+98156527 | MsG0180005962.01.T01:three_prime_UTR |
| AGTTGAGGAGTCCGACACGG+CGG | 0.682882 | 1:-98155491 | None:intergenic |
| TTGAGGAGTCCGACACGGCG+GGG | 0.686362 | 1:-98155489 | None:intergenic |
| GCGGGGCTTAGGGCAAACGA+CGG | 0.692402 | 1:-98155472 | None:intergenic |
| GTAAGTAGAAGAGTCATTAG+GGG | 0.703281 | 1:+98156641 | MsG0180005962.01.T01:three_prime_UTR |
| CTTGGACACAATTCTCACCA+AGG | 0.706031 | 1:+98155705 | MsG0180005962.01.T01:CDS |
| TGGTTGTAGAAGAAATGAAG+AGG | 0.719069 | 1:-98154749 | None:intergenic |
| GGGTTAGCTACTCTGCTCGG+CGG | 0.725325 | 1:-98156054 | None:intergenic |
| AAAGTAAAGAGGATGTTGTG+TGG | 0.752917 | 1:-98154769 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATATAAAATAATAG+AGG | - | Chr1:98155740-98155759 | None:intergenic | 10.0% |
| !!! | ATAGTTTTGTTTTAATTTTA+TGG | + | Chr1:98155082-98155101 | MsG0180005962.01.T01:intron | 10.0% |
| !!! | CTATTATTTTATATGAATTT+AGG | + | Chr1:98155740-98155759 | MsG0180005962.01.T01:intron | 10.0% |
| !! | AAAATTTCATCAAGAAAAAA+CGG | - | Chr1:98155015-98155034 | None:intergenic | 15.0% |
| !! | AGAAATAGAAATAGAATAAA+AGG | - | Chr1:98154921-98154940 | None:intergenic | 15.0% |
| !!! | AACGTGTTTATAATTTATTT+TGG | + | Chr1:98155197-98155216 | MsG0180005962.01.T01:intron | 15.0% |
| !!! | AATTGATCTATTTTTAACAT+TGG | + | Chr1:98155818-98155837 | MsG0180005962.01.T01:intron | 15.0% |
| !!! | ATATGAATTTAGGTTAAAAT+TGG | + | Chr1:98155750-98155769 | MsG0180005962.01.T01:intron | 15.0% |
| !!! | TCATTTTGATTTTCTTTTAT+GGG | + | Chr1:98156675-98156694 | MsG0180005962.01.T01:three_prime_UTR | 15.0% |
| !!! | TGTTTTATTTGTTAGTTTAA+CGG | + | Chr1:98155058-98155077 | MsG0180005962.01.T01:intron | 15.0% |
| !!! | TTCATTTTGATTTTCTTTTA+TGG | + | Chr1:98156674-98156693 | MsG0180005962.01.T01:three_prime_UTR | 15.0% |
| !! | AGAAATAGAATAAAAGGAAA+CGG | - | Chr1:98154915-98154934 | None:intergenic | 20.0% |
| !! | AGATTAAAGTTGAATATATG+TGG | - | Chr1:98154956-98154975 | None:intergenic | 20.0% |
| !! | CGAAAAAACAATAACAATTA+AGG | + | Chr1:98155140-98155159 | MsG0180005962.01.T01:intron | 20.0% |
| !! | TAGTTACAATTACAATTCAT+AGG | - | Chr1:98156702-98156721 | None:intergenic | 20.0% |
| !! | TATATAGTGACTAAATAATG+CGG | + | Chr1:98156527-98156546 | MsG0180005962.01.T01:three_prime_UTR | 20.0% |
| !! | TTGAATATATGTGGAAAAAA+TGG | - | Chr1:98154947-98154966 | None:intergenic | 20.0% |
| !!! | TTTTCTCTTTTAATTTGCTT+TGG | + | Chr1:98155590-98155609 | MsG0180005962.01.T01:intron | 20.0% |
| ! | AATAGAGGAATTATTTACCT+TGG | - | Chr1:98155725-98155744 | None:intergenic | 25.0% |
| ! | AATGAAAGAAGAAAGTAAAG+AGG | - | Chr1:98154783-98154802 | None:intergenic | 25.0% |
| ! | AGAAAATAAAATTTCGACGA+AGG | + | Chr1:98155430-98155449 | MsG0180005962.01.T01:five_prime_UTR | 25.0% |
| ! | TGAATTGTAATTGTAACTAC+CGG | + | Chr1:98156703-98156722 | MsG0180005962.01.T01:three_prime_UTR | 25.0% |
| !!! | ACAAATTTTCCTTTTTAAGC+CGG | - | Chr1:98156725-98156744 | None:intergenic | 25.0% |
| !!! | ATATATCTCGTTCTGAATTT+TGG | + | Chr1:98155368-98155387 | MsG0180005962.01.T01:intron | 25.0% |
| ACACAAAGCAATTCAACAAA+AGG | - | Chr1:98155914-98155933 | None:intergenic | 30.0% | |
| AGACACTAGTACAAGAAATA+AGG | - | Chr1:98156593-98156612 | None:intergenic | 30.0% | |
| CAGTAAATTCATTCAACACA+AGG | + | Chr1:98154843-98154862 | MsG0180005962.01.T01:five_prime_UTR | 30.0% | |
| CTTACAAAGTTACAAACAAG+AGG | - | Chr1:98156626-98156645 | None:intergenic | 30.0% | |
| GAATTTACTGTACAAAGCTA+TGG | - | Chr1:98154833-98154852 | None:intergenic | 30.0% | |
| GACACTAGTACAAGAAATAA+GGG | - | Chr1:98156592-98156611 | None:intergenic | 30.0% | |
| GGAAAAATTGTAACAGCTAA+AGG | - | Chr1:98155250-98155269 | None:intergenic | 30.0% | |
| TGTAAGTAGAAGAGTCATTA+GGG | + | Chr1:98156640-98156659 | MsG0180005962.01.T01:three_prime_UTR | 30.0% | |
| TTGTAAGTAGAAGAGTCATT+AGG | + | Chr1:98156639-98156658 | MsG0180005962.01.T01:three_prime_UTR | 30.0% | |
| AAAGTAAAGAGGATGTTGTG+TGG | - | Chr1:98154772-98154791 | None:intergenic | 35.0% | |
| AACAGCTAAAGGTTAAGATC+TGG | - | Chr1:98155239-98155258 | None:intergenic | 35.0% | |
| AGAAACGTTCATTTCATGGA+CGG | - | Chr1:98155271-98155290 | None:intergenic | 35.0% | |
| CAAAGTTACAAACAAGAGGA+TGG | - | Chr1:98156622-98156641 | None:intergenic | 35.0% | |
| GATGAGAAACGTTCATTTCA+TGG | - | Chr1:98155275-98155294 | None:intergenic | 35.0% | |
| GTAAGTAGAAGAGTCATTAG+GGG | + | Chr1:98156641-98156660 | MsG0180005962.01.T01:three_prime_UTR | 35.0% | |
| GTGACTAAATAATGCGGTTA+AGG | + | Chr1:98156533-98156552 | MsG0180005962.01.T01:three_prime_UTR | 35.0% | |
| TGCAGATTGAGGGTTAATTT+GGG | + | Chr1:98156557-98156576 | MsG0180005962.01.T01:three_prime_UTR | 35.0% | |
| TGGTTGTAGAAGAAATGAAG+AGG | - | Chr1:98154752-98154771 | None:intergenic | 35.0% | |
| TTAAGGTGATTAGAGCTAAG+CGG | + | Chr1:98155157-98155176 | MsG0180005962.01.T01:intron | 35.0% | |
| TTGCAGATTGAGGGTTAATT+TGG | + | Chr1:98156556-98156575 | MsG0180005962.01.T01:three_prime_UTR | 35.0% | |
| ! | ACTCTTTTCCTCTTCAAACT+AGG | - | Chr1:98156413-98156432 | None:intergenic | 35.0% |
| ! | GTCAATAGTGTCTCTTGTTT+AGG | + | Chr1:98156501-98156520 | MsG0180005962.01.T01:three_prime_UTR | 35.0% |
| !! | TTGTAACTACCGGCTTAAAA+AGG | + | Chr1:98156713-98156732 | MsG0180005962.01.T01:three_prime_UTR | 35.0% |
| AACCACCATATAAGAGCTAC+GGG | + | Chr1:98156369-98156388 | MsG0180005962.01.T01:three_prime_UTR | 40.0% | |
| AATCGAGCATCCTGAATTAG+TGG | - | Chr1:98156078-98156097 | None:intergenic | 40.0% | |
| AGTAGCTAACCCACTAATTC+AGG | + | Chr1:98156065-98156084 | MsG0180005962.01.T01:CDS | 40.0% | |
| ATCGAGCATCCTGAATTAGT+GGG | - | Chr1:98156077-98156096 | None:intergenic | 40.0% | |
| CAACCACCATATAAGAGCTA+CGG | + | Chr1:98156368-98156387 | MsG0180005962.01.T01:three_prime_UTR | 40.0% | |
| CATATAAGAGCTACGGGATA+AGG | + | Chr1:98156375-98156394 | MsG0180005962.01.T01:three_prime_UTR | 40.0% | |
| CTAATTCAGGATGCTCGATT+CGG | + | Chr1:98156078-98156097 | MsG0180005962.01.T01:CDS | 40.0% | |
| CTTATCCCGTAGCTCTTATA+TGG | - | Chr1:98156377-98156396 | None:intergenic | 40.0% | |
| GCAGATGAGTTTGAATCACA+CGG | - | Chr1:98155676-98155695 | None:intergenic | 40.0% | |
| GCAGGATGATGATTGTGATA+CGG | + | Chr1:98155978-98155997 | MsG0180005962.01.T01:intron | 40.0% | |
| TAATTCAGGATGCTCGATTC+GGG | + | Chr1:98156079-98156098 | MsG0180005962.01.T01:CDS | 40.0% | |
| TTGAATCACACGGTTCAACT+TGG | - | Chr1:98155666-98155685 | None:intergenic | 40.0% | |
| TTGGATGTCCTAGTTTGAAG+AGG | + | Chr1:98156402-98156421 | MsG0180005962.01.T01:three_prime_UTR | 40.0% | |
| TTGGTGAGAATTGTGTCCAA+GGG | - | Chr1:98155706-98155725 | None:intergenic | 40.0% | |
| TTTCGACGAAGGAAGATGAA+CGG | + | Chr1:98155441-98155460 | MsG0180005962.01.T01:exon | 40.0% | |
| ! | AGCTACGGGATAAGGAATTT+TGG | + | Chr1:98156383-98156402 | MsG0180005962.01.T01:three_prime_UTR | 40.0% |
| ! | TAGAAGAAATGAAGAGGTGC+AGG | - | Chr1:98154746-98154765 | None:intergenic | 40.0% |
| !! | CAATTTTGGTAACAATCCGG+CGG | + | Chr1:98156212-98156231 | MsG0180005962.01.T01:CDS | 40.0% |
| !! | GGCCAATTTTGGTAACAATC+CGG | + | Chr1:98156209-98156228 | MsG0180005962.01.T01:CDS | 40.0% |
| !! | GTTGTGCTTTTGTGATTTGC+AGG | + | Chr1:98155960-98155979 | MsG0180005962.01.T01:intron | 40.0% |
| AAATTCACCTGAGATGCCAC+CGG | - | Chr1:98155548-98155567 | None:intergenic | 45.0% | |
| AAGGATTCGATTGCCTTGAC+AGG | + | Chr1:98156244-98156263 | MsG0180005962.01.T01:CDS | 45.0% | |
| AGGATTCGATTGCCTTGACA+GGG | + | Chr1:98156245-98156264 | MsG0180005962.01.T01:CDS | 45.0% | |
| ATCCCGTAGCTCTTATATGG+TGG | - | Chr1:98156374-98156393 | None:intergenic | 45.0% | |
| CGCCGGATTGTTACCAAAAT+TGG | - | Chr1:98156214-98156233 | None:intergenic | 45.0% | |
| CGGTTAAGGTTGCAGATTGA+GGG | + | Chr1:98156547-98156566 | MsG0180005962.01.T01:three_prime_UTR | 45.0% | |
| CTTGGACACAATTCTCACCA+AGG | + | Chr1:98155705-98155724 | MsG0180005962.01.T01:CDS | 45.0% | |
| CTTGGTGAGAATTGTGTCCA+AGG | - | Chr1:98155707-98155726 | None:intergenic | 45.0% | |
| GTAGAAGAGTCATTAGGGGA+TGG | + | Chr1:98156645-98156664 | MsG0180005962.01.T01:three_prime_UTR | 45.0% | |
| ! | AAGAAATGAAGAGGTGCAGG+TGG | - | Chr1:98154743-98154762 | None:intergenic | 45.0% |
| ! | AATTCAGGATGCTCGATTCG+GGG | + | Chr1:98156080-98156099 | MsG0180005962.01.T01:CDS | 45.0% |
| ! | TGTTGTTCTAAGCCAGAGCA+GGG | - | Chr1:98156290-98156309 | None:intergenic | 45.0% |
| AAGGAAGGGAGGATGTGTTC+GGG | + | Chr1:98156188-98156207 | MsG0180005962.01.T01:CDS | 50.0% | |
| AATTACGGCTGTCCCTGTCA+AGG | - | Chr1:98156260-98156279 | None:intergenic | 50.0% | |
| ACTACCCTAGCAGATCCTTC+CGG | + | Chr1:98155526-98155545 | MsG0180005962.01.T01:CDS | 50.0% | |
| CAAGGAAGGGAGGATGTGTT+CGG | + | Chr1:98156187-98156206 | MsG0180005962.01.T01:CDS | 50.0% | |
| CGGAGACCCACAGAAAAATG+GGG | - | Chr1:98156037-98156056 | None:intergenic | 50.0% | |
| CTCATCTGCGTCAAATCCCT+TGG | + | Chr1:98155687-98155706 | MsG0180005962.01.T01:CDS | 50.0% | |
| CTCCCTTCCTTGCAGAAGAT+GGG | - | Chr1:98156179-98156198 | None:intergenic | 50.0% | |
| GAGCAGGGATGCTGCAATTA+CGG | - | Chr1:98156275-98156294 | None:intergenic | 50.0% | |
| GCGGAGACCCACAGAAAAAT+GGG | - | Chr1:98156038-98156057 | None:intergenic | 50.0% | |
| GCGGTTAAGGTTGCAGATTG+AGG | + | Chr1:98156546-98156565 | MsG0180005962.01.T01:three_prime_UTR | 50.0% | |
| GGAGACCCACAGAAAAATGG+GGG | - | Chr1:98156036-98156055 | None:intergenic | 50.0% | |
| GTGGAACTGCAAGCAAGCTT+GGG | - | Chr1:98154724-98154743 | None:intergenic | 50.0% | |
| TAATTGCAGCATCCCTGCTC+TGG | + | Chr1:98156275-98156294 | MsG0180005962.01.T01:CDS | 50.0% | |
| TCCCTTCCTTGCAGAAGATG+GGG | - | Chr1:98156178-98156197 | None:intergenic | 50.0% | |
| TCTGCTAGGGTAGTCGTTGA+CGG | - | Chr1:98155520-98155539 | None:intergenic | 50.0% | |
| ! | CTGTTGTTCTAAGCCAGAGC+AGG | - | Chr1:98156291-98156310 | None:intergenic | 50.0% |
| ! | GGATGTGTTCGGGCCAATTT+TGG | + | Chr1:98156198-98156217 | MsG0180005962.01.T01:CDS | 50.0% |
| !! | AGTGGGTTAGCTACTCTGCT+CGG | - | Chr1:98156060-98156079 | None:intergenic | 50.0% |
| AATCCTTCGACTCTCACCGC+CGG | - | Chr1:98156231-98156250 | None:intergenic | 55.0% | |
| AGTCGTTGACGGCGAAGTTG+AGG | - | Chr1:98155509-98155528 | None:intergenic | 55.0% | |
| CCATCTTCTGCAAGGAAGGG+AGG | + | Chr1:98156177-98156196 | MsG0180005962.01.T01:CDS | 55.0% | |
| CCCCCATCTTCTGCAAGGAA+GGG | + | Chr1:98156174-98156193 | MsG0180005962.01.T01:CDS | 55.0% | |
| CCCTTCCTTGCAGAAGATGG+GGG | - | Chr1:98156177-98156196 | None:intergenic | 55.0% | |
| CCTCCCTTCCTTGCAGAAGA+TGG | - | Chr1:98156180-98156199 | None:intergenic | 55.0% | |
| CGAAGTTGAGGAGTCCGACA+CGG | - | Chr1:98155497-98155516 | None:intergenic | 55.0% | |
| CTTCTCCCCCATCTTCTGCA+AGG | + | Chr1:98156169-98156188 | MsG0180005962.01.T01:CDS | 55.0% | |
| CTTGCAGAAGATGGGGGAGA+AGG | - | Chr1:98156171-98156190 | None:intergenic | 55.0% | |
| GACCCACAGAAAAATGGGGG+CGG | - | Chr1:98156033-98156052 | None:intergenic | 55.0% | |
| GGCGGAGACCCACAGAAAAA+TGG | - | Chr1:98156039-98156058 | None:intergenic | 55.0% | |
| GGTGGAACTGCAAGCAAGCT+TGG | - | Chr1:98154725-98154744 | None:intergenic | 55.0% | |
| TCCCCCATCTTCTGCAAGGA+AGG | + | Chr1:98156173-98156192 | MsG0180005962.01.T01:CDS | 55.0% | |
| AATCCGGCGGTGAGAGTCGA+AGG | + | Chr1:98156225-98156244 | MsG0180005962.01.T01:CDS | 60.0% | |
| ACCCATGACGACGGTGAGAG+GGG | - | Chr1:98156120-98156139 | None:intergenic | 60.0% | |
| ACCCTAGCAGATCCTTCCGG+TGG | + | Chr1:98155529-98155548 | MsG0180005962.01.T01:CDS | 60.0% | |
| AGAAGGTGGCAGACCGGATG+GGG | - | Chr1:98156154-98156173 | None:intergenic | 60.0% | |
| AGTTGAGGAGTCCGACACGG+CGG | - | Chr1:98155494-98155513 | None:intergenic | 60.0% | |
| CACCCATGACGACGGTGAGA+GGG | - | Chr1:98156121-98156140 | None:intergenic | 60.0% | |
| GAGAAGGTGGCAGACCGGAT+GGG | - | Chr1:98156155-98156174 | None:intergenic | 60.0% | |
| GATCCTTCCGGTGGCATCTC+AGG | + | Chr1:98155538-98155557 | MsG0180005962.01.T01:CDS | 60.0% | |
| GCAGAAGATGGGGGAGAAGG+TGG | - | Chr1:98156168-98156187 | None:intergenic | 60.0% | |
| GCCACCGGAAGGATCTGCTA+GGG | - | Chr1:98155533-98155552 | None:intergenic | 60.0% | |
| GGAACCACCACCCATGACGA+CGG | - | Chr1:98156129-98156148 | None:intergenic | 60.0% | |
| TCACCTGAGATGCCACCGGA+AGG | - | Chr1:98155544-98155563 | None:intergenic | 60.0% | |
| TGCCACCGGAAGGATCTGCT+AGG | - | Chr1:98155534-98155553 | None:intergenic | 60.0% | |
| !! | CGCCGCCCCCATTTTTCTGT+GGG | + | Chr1:98156028-98156047 | MsG0180005962.01.T01:CDS | 60.0% |
| !! | GGGTTAGCTACTCTGCTCGG+CGG | - | Chr1:98156057-98156076 | None:intergenic | 60.0% |
| !! | TCGCCGCCCCCATTTTTCTG+TGG | + | Chr1:98156027-98156046 | MsG0180005962.01.T01:CDS | 60.0% |
| CCACCCATGACGACGGTGAG+AGG | - | Chr1:98156122-98156141 | None:intergenic | 65.0% | |
| CCTCTCACCGTCGTCATGGG+TGG | + | Chr1:98156119-98156138 | MsG0180005962.01.T01:CDS | 65.0% | |
| CTCACCGTCGTCATGGGTGG+TGG | + | Chr1:98156122-98156141 | MsG0180005962.01.T01:CDS | 65.0% | |
| GAAAAATGGGGGCGGCGACG+AGG | - | Chr1:98156025-98156044 | None:intergenic | 65.0% | |
| GCCCCTCTCACCGTCGTCAT+GGG | + | Chr1:98156116-98156135 | MsG0180005962.01.T01:CDS | 65.0% | |
| GCGGGGCTTAGGGCAAACGA+CGG | - | Chr1:98155475-98155494 | None:intergenic | 65.0% | |
| GGAGAAGGTGGCAGACCGGA+TGG | - | Chr1:98156156-98156175 | None:intergenic | 65.0% | |
| GTGGTGGTTCCTGCCCCATC+CGG | + | Chr1:98156138-98156157 | MsG0180005962.01.T01:CDS | 65.0% | |
| GTTGAGGAGTCCGACACGGC+GGG | - | Chr1:98155493-98155512 | None:intergenic | 65.0% | |
| TGGGGGAGAAGGTGGCAGAC+CGG | - | Chr1:98156160-98156179 | None:intergenic | 65.0% | |
| TTGAGGAGTCCGACACGGCG+GGG | - | Chr1:98155492-98155511 | None:intergenic | 65.0% | |
| AGTCCGACACGGCGGGGCTT+AGG | - | Chr1:98155486-98155505 | None:intergenic | 70.0% | |
| CGCCCCTCTCACCGTCGTCA+TGG | + | Chr1:98156115-98156134 | MsG0180005962.01.T01:CDS | 70.0% | |
| GTCCGACACGGCGGGGCTTA+GGG | - | Chr1:98155485-98155504 | None:intergenic | 70.0% | |
| TGCCCTAAGCCCCGCCGTGT+CGG | + | Chr1:98155480-98155499 | MsG0180005962.01.T01:CDS | 70.0% | |
| GGCGGCGACGAGGCTACTGG+AGG | - | Chr1:98156015-98156034 | None:intergenic | 75.0% | |
| GGTGGCAGACCGGATGGGGC+AGG | - | Chr1:98156150-98156169 | None:intergenic | 75.0% | |
| ! | GGGGGCGGCGACGAGGCTAC+TGG | - | Chr1:98156018-98156037 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 98154713 | 98156846 | 98154713 | ID=MsG0180005962.01;Name=MsG0180005962.01 |
| Chr1 | mRNA | 98154713 | 98156846 | 98154713 | ID=MsG0180005962.01.T01;Parent=MsG0180005962.01;Name=MsG0180005962.01.T01;_AED=0.23;_eAED=0.23;_QI=188|1|1|1|0.66|0.5|4|544|163 |
| Chr1 | exon | 98154713 | 98154864 | 98154713 | ID=MsG0180005962.01.T01:exon:16418;Parent=MsG0180005962.01.T01 |
| Chr1 | exon | 98155420 | 98155559 | 98155420 | ID=MsG0180005962.01.T01:exon:16419;Parent=MsG0180005962.01.T01 |
| Chr1 | exon | 98155660 | 98155726 | 98155660 | ID=MsG0180005962.01.T01:exon:16420;Parent=MsG0180005962.01.T01 |
| Chr1 | exon | 98155982 | 98156846 | 98155982 | ID=MsG0180005962.01.T01:exon:16421;Parent=MsG0180005962.01.T01 |
| Chr1 | five_prime_UTR | 98154713 | 98154864 | 98154713 | ID=MsG0180005962.01.T01:five_prime_utr;Parent=MsG0180005962.01.T01 |
| Chr1 | five_prime_UTR | 98155420 | 98155455 | 98155420 | ID=MsG0180005962.01.T01:five_prime_utr;Parent=MsG0180005962.01.T01 |
| Chr1 | CDS | 98155456 | 98155559 | 98155456 | ID=MsG0180005962.01.T01:cds;Parent=MsG0180005962.01.T01 |
| Chr1 | CDS | 98155660 | 98155726 | 98155660 | ID=MsG0180005962.01.T01:cds;Parent=MsG0180005962.01.T01 |
| Chr1 | CDS | 98155982 | 98156302 | 98155982 | ID=MsG0180005962.01.T01:cds;Parent=MsG0180005962.01.T01 |
| Chr1 | three_prime_UTR | 98156303 | 98156846 | 98156303 | ID=MsG0180005962.01.T01:three_prime_utr;Parent=MsG0180005962.01.T01 |
| Gene Sequence |
| Protein sequence |
