Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003493.01.T01 | XP_003614705.1 | 95.238 | 84 | 4 | 0 | 9 | 92 | 843 | 926 | 1.61E-44 | 164 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003493.01.T01 | Q9S7Y7 | 44.706 | 85 | 43 | 3 | 9 | 92 | 832 | 913 | 1.23E-15 | 73.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003493.01.T01 | G7JXA7 | 95.238 | 84 | 4 | 0 | 9 | 92 | 843 | 926 | 7.69e-45 | 164 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048152.01 | MsG0180003493.01 | 0.804721 | 1.885229e-49 | 9.792386e-47 |
MsG0080048687.01 | MsG0180003493.01 | 0.804222 | 2.395586e-49 | 1.228281e-46 |
MsG0080048784.01 | MsG0180003493.01 | 0.824910 | 6.246409e-54 | 5.608995e-51 |
MsG0080048856.01 | MsG0180003493.01 | 0.813462 | 2.528813e-51 | 1.652611e-48 |
MsG0080048926.01 | MsG0180003493.01 | 0.810953 | 8.919301e-51 | 5.451463e-48 |
MsG0180000139.01 | MsG0180003493.01 | 0.860798 | 1.606471e-63 | 4.446268e-60 |
MsG0180000144.01 | MsG0180003493.01 | 0.804901 | 1.729098e-49 | 9.023421e-47 |
MsG0180000145.01 | MsG0180003493.01 | 0.811696 | 6.154167e-51 | 3.835227e-48 |
MsG0180000155.01 | MsG0180003493.01 | 0.835615 | 1.513496e-56 | 1.860594e-53 |
MsG0180000331.01 | MsG0180003493.01 | 0.813178 | 2.919279e-51 | 1.892834e-48 |
MsG0180000334.01 | MsG0180003493.01 | 0.811813 | 5.802711e-51 | 3.627645e-48 |
MsG0180000335.01 | MsG0180003493.01 | 0.807729 | 4.385242e-50 | 2.461073e-47 |
MsG0180000355.01 | MsG0180003493.01 | 0.828287 | 9.775503e-55 | 9.673641e-52 |
MsG0180000835.01 | MsG0180003493.01 | 0.858086 | 1.048462e-62 | 2.644594e-59 |
MsG0180001131.01 | MsG0180003493.01 | 0.807649 | 4.559558e-50 | 2.553461e-47 |
MsG0180001828.01 | MsG0180003493.01 | 0.833138 | 6.335637e-56 | 7.231599e-53 |
MsG0180002492.01 | MsG0180003493.01 | 0.800470 | 1.419975e-48 | 6.616933e-46 |
MsG0180002547.01 | MsG0180003493.01 | 0.810816 | 9.551788e-51 | 5.816051e-48 |
MsG0180003094.01 | MsG0180003493.01 | 0.830190 | 3.376073e-55 | 3.531778e-52 |
MsG0180003493.01 | MsG0180003548.01 | 0.822664 | 2.099254e-53 | 1.768438e-50 |
MsG0180003493.01 | MsG0180003651.01 | 0.848683 | 5.243238e-60 | 9.699181e-57 |
MsG0180003493.01 | MsG0180003786.01 | 0.830745 | 2.470353e-55 | 2.626292e-52 |
MsG0180003493.01 | MsG0180003793.01 | 0.832363 | 9.866587e-56 | 1.100348e-52 |
MsG0180003493.01 | MsG0180003885.01 | 0.804651 | 1.949852e-49 | 1.010898e-46 |
MsG0180003493.01 | MsG0180003932.01 | 0.802688 | 4.982507e-49 | 2.456265e-46 |
MsG0180003493.01 | MsG0180003951.01 | 0.822961 | 1.790067e-53 | 1.520697e-50 |
MsG0180003493.01 | MsG0180004009.01 | 0.815865 | 7.424665e-52 | 5.179103e-49 |
MsG0180003493.01 | MsG0180004046.01 | 0.821315 | 4.311187e-53 | 3.495352e-50 |
MsG0180003493.01 | MsG0180004062.01 | 0.852322 | 4.981728e-61 | 1.037171e-57 |
MsG0180003493.01 | MsG0180004152.01 | 0.818746 | 1.668853e-52 | 1.259857e-49 |
MsG0180003493.01 | MsG0180004481.01 | 0.826792 | 2.233923e-54 | 2.116238e-51 |
MsG0180003493.01 | MsG0180004482.01 | 0.834746 | 2.507699e-56 | 3.003158e-53 |
MsG0180003493.01 | MsG0180004509.01 | 0.813778 | 2.154667e-51 | 1.420071e-48 |
MsG0180003493.01 | MsG0180004605.01 | -0.819423 | 1.170398e-52 | 9.002955e-50 |
MsG0180003493.01 | MsG0180004854.01 | 0.831295 | 1.810173e-55 | 1.955928e-52 |
MsG0180003493.01 | MsG0180004861.01 | 0.800005 | 1.765039e-48 | 8.128641e-46 |
MsG0180003493.01 | MsG0180005049.01 | 0.807772 | 4.293626e-50 | 2.412332e-47 |
MsG0180003493.01 | MsG0180005334.01 | 0.837360 | 5.443918e-57 | 7.053991e-54 |
MsG0180003493.01 | MsG0180005575.01 | 0.859424 | 4.177176e-63 | 1.102703e-59 |
MsG0180003493.01 | MsG0180005659.01 | 0.822011 | 2.975321e-53 | 2.460107e-50 |
MsG0180003493.01 | MsG0180005746.01 | 0.843379 | 1.452565e-58 | 2.268708e-55 |
MsG0180003493.01 | MsG0180005962.01 | -0.851359 | 9.341988e-61 | 1.886293e-57 |
MsG0180003493.01 | MsG0180006017.01 | 0.822253 | 2.615569e-53 | 2.177673e-50 |
MsG0180003493.01 | MsG0180006224.01 | 0.807272 | 5.480420e-50 | 3.039446e-47 |
MsG0180003493.01 | MsG0280006422.01 | 0.816922 | 4.307795e-52 | 3.093163e-49 |
MsG0180003493.01 | MsG0280006712.01 | 0.822846 | 1.903966e-53 | 1.612253e-50 |
MsG0180003493.01 | MsG0280006993.01 | 0.843434 | 1.404583e-58 | 2.197346e-55 |
MsG0180003493.01 | MsG0280007067.01 | 0.802367 | 5.802635e-49 | 2.837395e-46 |
MsG0180003493.01 | MsG0280007226.01 | 0.827332 | 1.659140e-54 | 1.596968e-51 |
MsG0180003493.01 | MsG0280007452.01 | 0.855876 | 4.699386e-62 | 1.100818e-58 |
MsG0180003493.01 | MsG0280007501.01 | 0.810828 | 9.491062e-51 | 5.781172e-48 |
MsG0180003493.01 | MsG0280007503.01 | 0.810972 | 8.833970e-51 | 5.402048e-48 |
MsG0180003493.01 | MsG0280007527.01 | 0.837920 | 3.909434e-57 | 5.154167e-54 |
MsG0180003493.01 | MsG0280007763.01 | 0.806176 | 9.342171e-50 | 5.037038e-47 |
MsG0180003493.01 | MsG0280007847.01 | 0.803031 | 4.231537e-49 | 2.104350e-46 |
MsG0180003493.01 | MsG0280007903.01 | 0.800941 | 1.138005e-48 | 5.367093e-46 |
MsG0180003493.01 | MsG0280008378.01 | 0.800555 | 1.364139e-48 | 6.370722e-46 |
MsG0180003493.01 | MsG0280008429.01 | 0.802988 | 4.319471e-49 | 2.145647e-46 |
MsG0180003493.01 | MsG0280008909.01 | 0.805610 | 1.228396e-49 | 6.527585e-47 |
MsG0180003493.01 | MsG0280009141.01 | 0.807171 | 5.758150e-50 | 3.185004e-47 |
MsG0180003493.01 | MsG0280009794.01 | 0.837577 | 4.788322e-57 | 6.246777e-54 |
MsG0180003493.01 | MsG0280010015.01 | 0.836481 | 9.123299e-57 | 1.151212e-53 |
MsG0180003493.01 | MsG0280010082.01 | 0.856057 | 4.161011e-62 | 9.806148e-59 |
MsG0180003493.01 | MsG0280010776.01 | 0.819202 | 1.314148e-52 | 1.004661e-49 |
MsG0180003493.01 | MsG0280010778.01 | 0.807856 | 4.119269e-50 | 2.319415e-47 |
MsG0180003493.01 | MsG0280011014.01 | 0.803257 | 3.799939e-49 | 1.900682e-46 |
MsG0180003493.01 | MsG0280011339.01 | 0.841473 | 4.653073e-58 | 6.845030e-55 |
MsG0180003493.01 | MsG0280011341.01 | 0.812253 | 4.653613e-51 | 2.944248e-48 |
MsG0180003493.01 | MsG0280011387.01 | 0.818708 | 1.702635e-52 | 1.283966e-49 |
MsG0180003493.01 | MsG0280011388.01 | 0.828175 | 1.040413e-54 | 1.026279e-51 |
MsG0180003493.01 | MsG0280011416.01 | 0.809669 | 1.688091e-50 | 9.972666e-48 |
MsG0180003493.01 | MsG0380011516.01 | 0.832184 | 1.092716e-55 | 1.212141e-52 |
MsG0180003493.01 | MsG0380011844.01 | 0.812473 | 4.165007e-51 | 2.650800e-48 |
MsG0180003493.01 | MsG0380012122.01 | 0.833588 | 4.891260e-56 | 5.658213e-53 |
MsG0180003493.01 | MsG0380013183.01 | 0.818912 | 1.530036e-52 | 1.160488e-49 |
MsG0180003493.01 | MsG0380013475.01 | 0.801556 | 8.517782e-49 | 4.079825e-46 |
MsG0180003493.01 | MsG0380013641.01 | 0.807913 | 4.006326e-50 | 2.259129e-47 |
MsG0180003493.01 | MsG0380014175.01 | 0.830683 | 2.557641e-55 | 2.714187e-52 |
MsG0180003493.01 | MsG0380014778.01 | 0.826166 | 3.148889e-54 | 2.930296e-51 |
MsG0180003493.01 | MsG0380014874.01 | 0.805933 | 1.050724e-49 | 5.630169e-47 |
MsG0180003493.01 | MsG0380014875.01 | 0.824549 | 7.600234e-54 | 6.753900e-51 |
MsG0180003493.01 | MsG0380014907.01 | 0.826036 | 3.381561e-54 | 3.135190e-51 |
MsG0180003493.01 | MsG0380014948.01 | 0.800793 | 1.220159e-48 | 5.732531e-46 |
MsG0180003493.01 | MsG0380015332.01 | 0.816279 | 6.001828e-52 | 4.234562e-49 |
MsG0180003493.01 | MsG0380015435.01 | 0.819188 | 1.324333e-52 | 1.012031e-49 |
MsG0180003493.01 | MsG0380015463.01 | 0.807224 | 5.611143e-50 | 3.108024e-47 |
MsG0180003493.01 | MsG0380015831.01 | 0.805339 | 1.400291e-49 | 7.389387e-47 |
MsG0180003493.01 | MsG0380015870.01 | 0.813121 | 3.005109e-51 | 1.945433e-48 |
MsG0180003493.01 | MsG0380015875.01 | 0.830481 | 2.867162e-55 | 3.024331e-52 |
MsG0180003493.01 | MsG0380016005.01 | 0.852426 | 4.653637e-61 | 9.719746e-58 |
MsG0180003493.01 | MsG0380016067.01 | 0.811444 | 6.980355e-51 | 4.321746e-48 |
MsG0180003493.01 | MsG0380016126.01 | 0.864828 | 9.178659e-65 | 2.921646e-61 |
MsG0180003493.01 | MsG0380016131.01 | 0.807615 | 4.636095e-50 | 2.594009e-47 |
MsG0180003493.01 | MsG0380016247.01 | 0.845711 | 3.425026e-59 | 5.758928e-56 |
MsG0180003493.01 | MsG0380016290.01 | 0.809776 | 1.600815e-50 | 9.484135e-48 |
MsG0180003493.01 | MsG0380016505.01 | 0.841483 | 4.625031e-58 | 6.805898e-55 |
MsG0180003493.01 | MsG0380016671.01 | 0.870910 | 1.020863e-66 | 4.040444e-63 |
MsG0180003493.01 | MsG0380016860.01 | 0.803687 | 3.094578e-49 | 1.565087e-46 |
MsG0180003493.01 | MsG0380016970.01 | 0.828892 | 6.984381e-55 | 7.033718e-52 |
MsG0180003493.01 | MsG0380018033.01 | 0.805598 | 1.235712e-49 | 6.564410e-47 |
MsG0180003493.01 | MsG0480018124.01 | 0.810971 | 8.839542e-51 | 5.405261e-48 |
MsG0180003493.01 | MsG0480018278.01 | 0.878769 | 2.147586e-69 | 1.135091e-65 |
MsG0180003493.01 | MsG0480018477.01 | 0.817241 | 3.651950e-52 | 2.645176e-49 |
MsG0180003493.01 | MsG0480018894.01 | 0.853681 | 2.035279e-61 | 4.433446e-58 |
MsG0180003493.01 | MsG0480019380.01 | 0.800845 | 1.190497e-48 | 5.600966e-46 |
MsG0180003493.01 | MsG0480019539.01 | 0.835050 | 2.103081e-56 | 2.541837e-53 |
MsG0180003493.01 | MsG0480020675.01 | 0.814484 | 1.505170e-51 | 1.011240e-48 |
MsG0180003493.01 | MsG0480020780.01 | 0.800371 | 1.487541e-48 | 6.914738e-46 |
MsG0180003493.01 | MsG0480020874.01 | 0.801051 | 1.080754e-48 | 5.111395e-46 |
MsG0180003493.01 | MsG0480021037.01 | 0.897898 | 8.991056e-77 | 1.037542e-72 |
MsG0180003493.01 | MsG0480021056.01 | 0.839462 | 1.562301e-57 | 2.159081e-54 |
MsG0180003493.01 | MsG0480021195.01 | 0.811238 | 7.736364e-51 | 4.763645e-48 |
MsG0180003493.01 | MsG0480021706.01 | 0.818084 | 2.357535e-52 | 1.747429e-49 |
MsG0180003493.01 | MsG0480022549.01 | 0.813140 | 2.976208e-51 | 1.927752e-48 |
MsG0180003493.01 | MsG0480022586.01 | 0.812825 | 3.488045e-51 | 2.240314e-48 |
MsG0180003493.01 | MsG0480022672.01 | 0.802737 | 4.868052e-49 | 2.402909e-46 |
MsG0180003493.01 | MsG0480022696.01 | 0.804473 | 2.123770e-49 | 1.095994e-46 |
MsG0180003493.01 | MsG0480022711.01 | 0.804125 | 2.509725e-49 | 1.283664e-46 |
MsG0180003493.01 | MsG0480022780.01 | 0.806933 | 6.466343e-50 | 3.554694e-47 |
MsG0180003493.01 | MsG0480022855.01 | 0.821262 | 4.433638e-53 | 3.589182e-50 |
MsG0180003493.01 | MsG0480022877.01 | 0.836357 | 9.814760e-57 | 1.233940e-53 |
MsG0180003493.01 | MsG0480023009.01 | 0.808851 | 2.528186e-50 | 1.461221e-47 |
MsG0180003493.01 | MsG0480023162.01 | 0.803162 | 3.977102e-49 | 1.984465e-46 |
MsG0180003493.01 | MsG0480023172.01 | 0.820017 | 8.566637e-53 | 6.700055e-50 |
MsG0180003493.01 | MsG0480023221.01 | 0.832676 | 8.253050e-56 | 9.290171e-53 |
MsG0180003493.01 | MsG0480023387.01 | 0.804708 | 1.897367e-49 | 9.851415e-47 |
MsG0180003493.01 | MsG0480023463.01 | 0.838621 | 2.579024e-57 | 3.473907e-54 |
MsG0180003493.01 | MsG0480023503.01 | 0.815099 | 1.099339e-51 | 7.508943e-49 |
MsG0180003493.01 | MsG0480023657.01 | 0.831687 | 1.449129e-55 | 1.584306e-52 |
MsG0180003493.01 | MsG0580024197.01 | 0.820986 | 5.133600e-53 | 4.124632e-50 |
MsG0180003493.01 | MsG0580025131.01 | 0.815368 | 9.581456e-52 | 6.593385e-49 |
MsG0180003493.01 | MsG0580025241.01 | 0.821925 | 3.114624e-53 | 2.569120e-50 |
MsG0180003493.01 | MsG0580025242.01 | 0.816295 | 5.952728e-52 | 4.201799e-49 |
MsG0180003493.01 | MsG0580025268.01 | 0.821031 | 5.012138e-53 | 4.032160e-50 |
MsG0180003493.01 | MsG0580025332.01 | 0.811749 | 5.990391e-51 | 3.738694e-48 |
MsG0180003493.01 | MsG0580025409.01 | 0.827041 | 1.947653e-54 | 1.858517e-51 |
MsG0180003493.01 | MsG0580025814.01 | 0.825123 | 5.565710e-54 | 5.027889e-51 |
MsG0180003493.01 | MsG0580026059.01 | 0.822637 | 2.129424e-53 | 1.792587e-50 |
MsG0180003493.01 | MsG0580026226.01 | 0.812853 | 3.439309e-51 | 2.210678e-48 |
MsG0180003493.01 | MsG0580027925.01 | 0.809479 | 1.854071e-50 | 1.089754e-47 |
MsG0180003493.01 | MsG0580027999.01 | 0.823949 | 1.051440e-53 | 9.185387e-51 |
MsG0180003493.01 | MsG0580028630.01 | 0.808549 | 2.933303e-50 | 1.682059e-47 |
MsG0180003493.01 | MsG0580029127.01 | 0.832860 | 7.428824e-56 | 8.408510e-53 |
MsG0180003493.01 | MsG0580029729.01 | 0.828752 | 7.550109e-55 | 7.572582e-52 |
MsG0180003493.01 | MsG0580030010.01 | 0.818666 | 1.740085e-52 | 1.310691e-49 |
MsG0180003493.01 | MsG0580030080.01 | 0.819737 | 9.926276e-53 | 7.702670e-50 |
MsG0180003493.01 | MsG0680030350.01 | 0.817218 | 3.696363e-52 | 2.675709e-49 |
MsG0180003493.01 | MsG0680030721.01 | 0.837970 | 3.795095e-57 | 5.011499e-54 |
MsG0180003493.01 | MsG0680030865.01 | 0.847643 | 1.015827e-59 | 1.817459e-56 |
MsG0180003493.01 | MsG0680031628.01 | 0.860375 | 2.157519e-63 | 5.885301e-60 |
MsG0180003493.01 | MsG0680031762.01 | 0.813304 | 2.739724e-51 | 1.782607e-48 |
MsG0180003493.01 | MsG0680031967.01 | 0.809722 | 1.643957e-50 | 9.725741e-48 |
MsG0180003493.01 | MsG0680035876.01 | 0.828849 | 7.150859e-55 | 7.192453e-52 |
MsG0180003493.01 | MsG0680035888.01 | 0.865146 | 7.298011e-65 | 2.349888e-61 |
MsG0180003493.01 | MsG0780036136.01 | 0.839848 | 1.239378e-57 | 1.733319e-54 |
MsG0180003493.01 | MsG0780036477.01 | 0.816951 | 4.243144e-52 | 3.049431e-49 |
MsG0180003493.01 | MsG0780036659.01 | 0.804291 | 2.317778e-49 | 1.190561e-46 |
MsG0180003493.01 | MsG0780036757.01 | 0.824203 | 9.164523e-54 | 8.063405e-51 |
MsG0180003493.01 | MsG0780036815.01 | 0.803435 | 3.491689e-49 | 1.754485e-46 |
MsG0180003493.01 | MsG0780037093.01 | 0.866015 | 3.882100e-65 | 1.289073e-61 |
MsG0180003493.01 | MsG0780037240.01 | 0.805722 | 1.163714e-49 | 6.202216e-47 |
MsG0180003493.01 | MsG0780038400.01 | 0.864380 | 1.267891e-64 | 3.972803e-61 |
MsG0180003493.01 | MsG0780038603.01 | 0.832594 | 8.648614e-56 | 9.711612e-53 |
MsG0180003493.01 | MsG0780038892.01 | 0.843998 | 9.921909e-59 | 1.579924e-55 |
MsG0180003493.01 | MsG0780039443.01 | 0.812893 | 3.371466e-51 | 2.169442e-48 |
MsG0180003493.01 | MsG0780040057.01 | 0.809183 | 2.146036e-50 | 1.251488e-47 |
MsG0180003493.01 | MsG0780040529.01 | 0.810353 | 1.202266e-50 | 7.230796e-48 |
MsG0180003493.01 | MsG0780040926.01 | 0.837539 | 4.898498e-57 | 6.382788e-54 |
MsG0180003493.01 | MsG0780041016.01 | 0.870211 | 1.732083e-66 | 6.683111e-63 |
MsG0180003493.01 | MsG0780041137.01 | 0.821850 | 3.241789e-53 | 2.668399e-50 |
MsG0180003493.01 | MsG0780041223.01 | 0.829808 | 4.183855e-55 | 4.329355e-52 |
MsG0180003493.01 | MsG0780041268.01 | 0.823424 | 1.395836e-53 | 1.201295e-50 |
MsG0180003493.01 | MsG0780041391.01 | 0.801906 | 7.218138e-49 | 3.488250e-46 |
MsG0180003493.01 | MsG0780041440.01 | 0.824691 | 7.038062e-54 | 6.280469e-51 |
MsG0180003493.01 | MsG0780041559.01 | 0.805613 | 1.226899e-49 | 6.520125e-47 |
MsG0180003493.01 | MsG0780041699.01 | 0.806694 | 7.262963e-50 | 3.967991e-47 |
MsG0180003493.01 | MsG0880042128.01 | 0.831171 | 1.942081e-55 | 2.090824e-52 |
MsG0180003493.01 | MsG0880042129.01 | 0.830514 | 2.813266e-55 | 2.970454e-52 |
MsG0180003493.01 | MsG0880042324.01 | 0.804850 | 1.771811e-49 | 9.233841e-47 |
MsG0180003493.01 | MsG0880042519.01 | 0.828081 | 1.096093e-54 | 1.078226e-51 |
MsG0180003493.01 | MsG0880042544.01 | 0.807134 | 5.862414e-50 | 3.239479e-47 |
MsG0180003493.01 | MsG0880042581.01 | 0.804527 | 2.069760e-49 | 1.069584e-46 |
MsG0180003493.01 | MsG0880042779.01 | 0.823161 | 1.607957e-53 | 1.373697e-50 |
MsG0180003493.01 | MsG0880042795.01 | 0.823434 | 1.388240e-53 | 1.195122e-50 |
MsG0180003493.01 | MsG0880042991.01 | 0.812873 | 3.405906e-51 | 2.190353e-48 |
MsG0180003493.01 | MsG0880043081.01 | 0.809868 | 1.529236e-50 | 9.081520e-48 |
MsG0180003493.01 | MsG0880043944.01 | 0.823150 | 1.617130e-53 | 1.381185e-50 |
MsG0180003493.01 | MsG0880044008.01 | 0.821122 | 4.775407e-53 | 3.851217e-50 |
MsG0180003493.01 | MsG0880044555.01 | 0.828082 | 1.095270e-54 | 1.077455e-51 |
MsG0180003493.01 | MsG0880044782.01 | 0.815038 | 1.134345e-51 | 7.735660e-49 |
MsG0180003493.01 | MsG0880045124.01 | 0.842683 | 2.226760e-58 | 3.402002e-55 |
MsG0180003493.01 | MsG0880045145.01 | 0.803368 | 3.603920e-49 | 1.807723e-46 |
MsG0180003493.01 | MsG0880045294.01 | 0.870535 | 1.355983e-66 | 5.293609e-63 |
MsG0180003493.01 | MsG0880045483.01 | 0.810733 | 9.953174e-51 | 6.047227e-48 |
MsG0180003493.01 | MsG0880045684.01 | 0.837987 | 3.757014e-57 | 4.963932e-54 |
MsG0180003493.01 | MsG0880046059.01 | 0.848471 | 5.999930e-60 | 1.102440e-56 |
MsG0180003493.01 | MsG0880046284.01 | 0.808155 | 3.558805e-50 | 2.019816e-47 |
MsG0180003493.01 | MsG0880047473.01 | 0.806387 | 8.432362e-50 | 4.570728e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003493.01.T01 | MTR_5g057990 | 95.238 | 84 | 4 | 0 | 9 | 92 | 843 | 926 | 1.95e-48 | 164 |
MsG0180003493.01.T01 | MTR_1g111000 | 55.435 | 92 | 37 | 1 | 1 | 92 | 850 | 937 | 1.66e-28 | 107 |
MsG0180003493.01.T01 | MTR_1g110980 | 52.381 | 84 | 35 | 2 | 9 | 92 | 846 | 924 | 7.68e-24 | 94.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180003493.01.T01 | AT1G68560 | 44.706 | 85 | 43 | 3 | 9 | 92 | 832 | 913 | 1.25e-16 | 73.6 |
MsG0180003493.01.T01 | AT3G45940 | 39.286 | 84 | 48 | 3 | 11 | 92 | 771 | 853 | 8.39e-12 | 59.7 |
Find 22 sgRNAs with CRISPR-Local
Find 22 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGCTATGACATGGAAAA+TGG | 0.163449 | 1:+63185194 | MsG0180003493.01.T01:CDS |
TTAGATGGAAAACCACTAAT+TGG | 0.283753 | 1:+63185054 | MsG0180003493.01.T01:CDS |
ATTTCTGTGTTGGGATTAGA+TGG | 0.354107 | 1:+63185003 | MsG0180003493.01.T01:CDS |
TACTTCTGAACATGTGCATT+TGG | 0.366445 | 1:+63185098 | MsG0180003493.01.T01:CDS |
ATTGATTCAATTTCTGTGTT+GGG | 0.371345 | 1:+63184994 | MsG0180003493.01.T01:CDS |
GTGGCTTCACTTGAGTTAGA+TGG | 0.373357 | 1:+63185039 | MsG0180003493.01.T01:CDS |
ACACTTGACAAGCCAATTAG+TGG | 0.412039 | 1:-63185066 | None:intergenic |
GCAAGGTGGATTGATCTCTA+AGG | 0.447708 | 1:+63184948 | MsG0180003493.01.T01:CDS |
TATTGATTCAATTTCTGTGT+TGG | 0.473152 | 1:+63184993 | MsG0180003493.01.T01:CDS |
TTTGCTATGACATGGAAAAT+GGG | 0.511308 | 1:+63185195 | MsG0180003493.01.T01:CDS |
TCTAAGGATGCTTTAGACAA+AGG | 0.534929 | 1:+63184964 | MsG0180003493.01.T01:CDS |
AGATGGAAGTGTTGGAGCAG+TGG | 0.546659 | 1:+63185020 | MsG0180003493.01.T01:CDS |
TTGGGATTAGATGGAAGTGT+TGG | 0.571364 | 1:+63185012 | MsG0180003493.01.T01:CDS |
CATTTGGAAGGTGAAGGAAA+TGG | 0.600808 | 1:+63185114 | MsG0180003493.01.T01:CDS |
TCTGAACATGTGCATTTGGA+AGG | 0.603305 | 1:+63185102 | MsG0180003493.01.T01:CDS |
ACTGTGATGGTAACTTTGAG+AGG | 0.604296 | 1:+63185147 | MsG0180003493.01.T01:CDS |
AGAGGGTTGAGCATTCCTGT+TGG | 0.649091 | 1:+63185165 | MsG0180003493.01.T01:CDS |
CTGTGATGGTAACTTTGAGA+GGG | 0.681039 | 1:+63185148 | MsG0180003493.01.T01:CDS |
TGGTGAAAGTAAGACTGTGA+TGG | 0.681480 | 1:+63185134 | MsG0180003493.01.T01:CDS |
TGATCTCTAAGGATGCAGCA+AGG | 0.697333 | 1:+63184931 | None:intergenic |
TCTCTAAGGATGCAGCAAGG+TGG | 0.705537 | 1:+63184934 | None:intergenic |
CATGTGCATTTGGAAGGTGA+AGG | 0.717327 | 1:+63185108 | MsG0180003493.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTGATTCAATTTCTGTGTT+GGG | + | Chr1:63184994-63185013 | MsG0180003493.01.T01:CDS | 25.0% |
!!! | TATTGATTCAATTTCTGTGT+TGG | + | Chr1:63184993-63185012 | MsG0180003493.01.T01:CDS | 25.0% |
TTAGATGGAAAACCACTAAT+TGG | + | Chr1:63185054-63185073 | MsG0180003493.01.T01:CDS | 30.0% | |
! | ATAGCAAAGTTTTTACCAAC+AGG | - | Chr1:63185183-63185202 | None:intergenic | 30.0% |
! | GTAAAAACTTTGCTATGACA+TGG | + | Chr1:63185187-63185206 | MsG0180003493.01.T01:CDS | 30.0% |
! | TTTGCTATGACATGGAAAAT+GGG | + | Chr1:63185195-63185214 | MsG0180003493.01.T01:CDS | 30.0% |
ATTTCTGTGTTGGGATTAGA+TGG | + | Chr1:63185003-63185022 | MsG0180003493.01.T01:CDS | 35.0% | |
TACTTCTGAACATGTGCATT+TGG | + | Chr1:63185098-63185117 | MsG0180003493.01.T01:CDS | 35.0% | |
! | CTTTGCTATGACATGGAAAA+TGG | + | Chr1:63185194-63185213 | MsG0180003493.01.T01:CDS | 35.0% |
! | TCTAAGGATGCTTTAGACAA+AGG | + | Chr1:63184964-63184983 | MsG0180003493.01.T01:CDS | 35.0% |
ACACTTGACAAGCCAATTAG+TGG | - | Chr1:63185069-63185088 | None:intergenic | 40.0% | |
ACTGTGATGGTAACTTTGAG+AGG | + | Chr1:63185147-63185166 | MsG0180003493.01.T01:CDS | 40.0% | |
CATTTGGAAGGTGAAGGAAA+TGG | + | Chr1:63185114-63185133 | MsG0180003493.01.T01:CDS | 40.0% | |
TCTGAACATGTGCATTTGGA+AGG | + | Chr1:63185102-63185121 | MsG0180003493.01.T01:CDS | 40.0% | |
TGGTGAAAGTAAGACTGTGA+TGG | + | Chr1:63185134-63185153 | MsG0180003493.01.T01:CDS | 40.0% | |
! | CTGTGATGGTAACTTTGAGA+GGG | + | Chr1:63185148-63185167 | MsG0180003493.01.T01:CDS | 40.0% |
! | TTGGGATTAGATGGAAGTGT+TGG | + | Chr1:63185012-63185031 | MsG0180003493.01.T01:CDS | 40.0% |
CATGTGCATTTGGAAGGTGA+AGG | + | Chr1:63185108-63185127 | MsG0180003493.01.T01:CDS | 45.0% | |
GTGGCTTCACTTGAGTTAGA+TGG | + | Chr1:63185039-63185058 | MsG0180003493.01.T01:CDS | 45.0% | |
!! | GCAAGGTGGATTGATCTCTA+AGG | + | Chr1:63184948-63184967 | MsG0180003493.01.T01:CDS | 45.0% |
AGAGGGTTGAGCATTCCTGT+TGG | + | Chr1:63185165-63185184 | MsG0180003493.01.T01:CDS | 50.0% | |
!! | AGATGGAAGTGTTGGAGCAG+TGG | + | Chr1:63185020-63185039 | MsG0180003493.01.T01:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 63184943 | 63185221 | 63184943 | ID=MsG0180003493.01;Name=MsG0180003493.01 |
Chr1 | mRNA | 63184943 | 63185221 | 63184943 | ID=MsG0180003493.01.T01;Parent=MsG0180003493.01;Name=MsG0180003493.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|92 |
Chr1 | exon | 63184943 | 63185221 | 63184943 | ID=MsG0180003493.01.T01:exon:5696;Parent=MsG0180003493.01.T01 |
Chr1 | CDS | 63184943 | 63185221 | 63184943 | ID=MsG0180003493.01.T01:cds;Parent=MsG0180003493.01.T01 |
Gene Sequence |
Protein sequence |