AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025477.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025477.01.T01 MTR_5g029470 97.022 403 7 4 1 399 1 402 0.0 783
MsG0580025477.01.T01 MTR_8g066310 56.683 404 115 16 1 396 1 352 2.91e-122 358
MsG0580025477.01.T01 MTR_3g064840 52.968 219 65 8 198 398 256 454 2.59e-51 179
MsG0580025477.01.T01 MTR_1g021520 46.032 189 72 7 210 398 120 278 6.87e-37 136
MsG0580025477.01.T01 MTR_6g071625 76.744 86 18 1 198 281 182 267 2.65e-36 136
MsG0580025477.01.T01 MTR_7g069660 45.763 118 45 3 175 290 45 145 9.01e-23 99.0
MsG0580025477.01.T01 MTR_1g112370 48.113 106 47 4 215 314 21 124 6.74e-21 93.2
MsG0580025477.01.T01 MTR_0223s0040 65.517 58 20 0 215 272 17 74 8.68e-21 92.0
MsG0580025477.01.T01 MTR_2g023580 59.722 72 28 1 209 280 49 119 5.46e-20 88.6
MsG0580025477.01.T01 MTR_2g084230 68.966 58 18 0 215 272 96 153 1.10e-19 89.4
MsG0580025477.01.T01 MTR_2g084230 68.966 58 18 0 215 272 96 153 1.69e-19 89.7
MsG0580025477.01.T01 MTR_8g086410 64.062 64 22 1 215 278 110 172 3.54e-19 89.4
MsG0580025477.01.T01 MTR_8g086410 64.062 64 22 1 215 278 108 170 3.56e-19 89.4
MsG0580025477.01.T01 MTR_2g016220 58.571 70 28 1 215 284 88 156 4.55e-18 85.5
MsG0580025477.01.T01 MTR_2g016220 58.571 70 28 1 215 284 88 156 4.62e-18 85.5
MsG0580025477.01.T01 MTR_7g098250 61.905 63 24 0 210 272 256 318 1.31e-17 84.7
MsG0580025477.01.T01 MTR_8g086410 64.286 56 20 0 215 270 110 165 2.77e-17 83.6
MsG0580025477.01.T01 MTR_1g080330 63.333 60 22 0 213 272 172 231 4.64e-17 81.3
MsG0580025477.01.T01 MTR_1g080330 63.333 60 22 0 213 272 172 231 5.06e-17 82.4
MsG0580025477.01.T01 MTR_7g115530 64.286 56 20 0 217 272 219 274 8.72e-17 80.9
MsG0580025477.01.T01 MTR_5g027440 69.811 53 16 0 217 269 26 78 8.94e-17 80.5
MsG0580025477.01.T01 MTR_3g450310 58.929 56 23 0 217 272 20 75 1.03e-16 79.0
MsG0580025477.01.T01 MTR_7g115530 64.286 56 20 0 217 272 219 274 1.65e-16 80.5
MsG0580025477.01.T01 MTR_7g115530 64.286 56 20 0 217 272 219 274 2.20e-16 80.9
MsG0580025477.01.T01 MTR_7g115530 64.286 56 20 0 217 272 219 274 2.44e-16 80.1
MsG0580025477.01.T01 MTR_7g093030 52.941 68 30 1 218 285 214 279 2.83e-16 79.0
MsG0580025477.01.T01 MTR_2g016220 55.405 74 28 2 215 284 88 160 3.64e-16 79.7
MsG0580025477.01.T01 MTR_7g093030 60.000 55 22 0 218 272 214 268 5.79e-16 79.3
MsG0580025477.01.T01 MTR_5g041350 44.872 78 43 0 217 294 16 93 1.74e-15 77.4
MsG0580025477.01.T01 MTR_7g088070 61.818 55 21 0 218 272 52 106 1.93e-15 76.6
MsG0580025477.01.T01 MTR_7g088070 61.818 55 21 0 218 272 52 106 2.07e-15 76.3
MsG0580025477.01.T01 MTR_1g053835 60.000 55 22 0 218 272 260 314 2.65e-15 77.4
MsG0580025477.01.T01 MTR_2g027860 50.649 77 36 1 218 294 51 125 2.91e-15 76.6
MsG0580025477.01.T01 MTR_1g090670 58.333 60 25 0 217 276 45 104 4.70e-15 75.5
MsG0580025477.01.T01 MTR_2g086450 58.929 56 23 0 217 272 46 101 4.95e-15 76.6
MsG0580025477.01.T01 MTR_6g444980 58.929 56 23 0 217 272 36 91 6.65e-15 75.9
MsG0580025477.01.T01 MTR_6g444980 58.929 56 23 0 217 272 36 91 7.78e-15 75.9
MsG0580025477.01.T01 MTR_2g027800 50.000 74 34 1 217 287 40 113 9.61e-15 74.7
MsG0580025477.01.T01 MTR_7g115530 63.462 52 19 0 217 268 219 270 1.94e-14 73.6
MsG0580025477.01.T01 MTR_6g032990 56.140 57 25 0 217 273 43 99 2.21e-14 74.7
MsG0580025477.01.T01 MTR_2g027800 62.264 53 20 0 217 269 40 92 2.45e-14 73.6
MsG0580025477.01.T01 MTR_7g115530 66.000 50 17 0 217 266 219 268 2.63e-14 73.2
MsG0580025477.01.T01 MTR_4g081710 54.386 57 26 0 217 273 18 74 9.41e-14 72.4
MsG0580025477.01.T01 MTR_1g053830 50.909 55 27 0 218 272 20 74 5.52e-12 62.4
MsG0580025477.01.T01 MTR_7g068600 55.172 58 23 1 218 272 15 72 7.68e-12 65.1
MsG0580025477.01.T01 MTR_1g053800 52.830 53 25 0 218 270 179 231 8.20e-12 66.2
MsG0580025477.01.T01 MTR_7g093010 39.535 86 49 1 218 303 215 297 1.44e-11 65.9
MsG0580025477.01.T01 MTR_2g450070 43.210 81 39 2 213 287 210 289 2.86e-11 65.5
MsG0580025477.01.T01 MTR_2g450070 43.210 81 39 2 213 287 210 289 2.93e-11 65.5
MsG0580025477.01.T01 MTR_4g086835 51.282 78 34 2 215 290 273 348 3.50e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025477.01.T01 AT1G32240 53.846 416 143 14 1 397 1 386 1.42e-100 304
MsG0580025477.01.T01 AT1G32240 53.243 370 128 11 1 353 1 342 7.90e-92 281
MsG0580025477.01.T01 AT4G17695 39.130 414 140 14 1 398 1 318 2.08e-61 201
MsG0580025477.01.T01 AT5G16560 41.528 301 119 8 141 398 112 398 5.24e-49 171
MsG0580025477.01.T01 AT1G32240 61.589 151 42 7 251 397 1 139 7.84e-39 136
MsG0580025477.01.T01 AT5G42630 80.000 75 15 0 211 285 100 174 1.94e-35 130
MsG0580025477.01.T01 AT5G42630 59.016 122 43 2 211 328 100 218 5.17e-35 130
MsG0580025477.01.T01 AT2G38300 55.000 80 35 1 209 288 48 126 5.08e-21 93.6
MsG0580025477.01.T01 AT2G02060 72.222 54 15 0 216 269 29 82 5.18e-20 89.4
MsG0580025477.01.T01 AT2G02060 72.222 54 15 0 216 269 29 82 5.18e-20 89.4
MsG0580025477.01.T01 AT1G14600 66.102 59 20 0 216 274 23 81 1.06e-19 88.2
MsG0580025477.01.T01 AT4G04605 65.517 58 20 0 215 272 13 70 1.26e-19 87.4
MsG0580025477.01.T01 AT5G45580 46.087 115 53 3 217 323 8 121 1.96e-19 87.8
MsG0580025477.01.T01 AT5G45580 46.087 115 53 3 217 323 24 137 3.65e-19 87.4
MsG0580025477.01.T01 AT2G40260 62.687 67 24 1 209 275 76 141 1.61e-18 87.0
MsG0580025477.01.T01 AT4G04580 59.322 59 24 0 217 275 15 73 4.97e-18 81.3
MsG0580025477.01.T01 AT2G42660 66.071 56 19 0 217 272 51 106 8.02e-18 82.8
MsG0580025477.01.T01 AT4G04555 51.316 76 34 2 200 275 1 73 4.95e-17 76.6
MsG0580025477.01.T01 AT4G28610 65.455 55 19 0 218 272 227 281 3.64e-16 80.1
MsG0580025477.01.T01 AT3G12730 62.500 56 21 0 217 272 24 79 5.00e-16 77.4
MsG0580025477.01.T01 AT5G29000 52.778 72 34 0 218 289 233 304 1.22e-15 77.4
MsG0580025477.01.T01 AT2G01060 63.636 55 20 0 218 272 17 71 1.64e-15 77.0
MsG0580025477.01.T01 AT3G04450 56.250 64 28 0 209 272 231 294 1.76e-15 77.0
MsG0580025477.01.T01 AT3G04450 54.286 70 31 1 204 272 185 254 2.82e-15 77.4
MsG0580025477.01.T01 AT3G04450 54.286 70 31 1 204 272 185 254 2.82e-15 77.4
MsG0580025477.01.T01 AT3G04450 54.286 70 31 1 204 272 225 294 3.03e-15 77.4
MsG0580025477.01.T01 AT3G24120 62.264 53 20 0 217 269 42 94 3.24e-15 76.3
MsG0580025477.01.T01 AT3G24120 62.264 53 20 0 217 269 42 94 3.26e-15 76.3
MsG0580025477.01.T01 AT5G29000 54.545 66 30 0 218 283 190 255 3.74e-15 76.6
MsG0580025477.01.T01 AT5G29000 54.545 66 30 0 218 283 190 255 3.74e-15 76.6
MsG0580025477.01.T01 AT5G29000 54.545 66 30 0 218 283 233 298 4.91e-15 76.6
MsG0580025477.01.T01 AT1G79430 58.929 56 23 0 217 272 35 90 5.09e-15 76.3
MsG0580025477.01.T01 AT4G13640 60.377 53 21 0 217 269 38 90 1.16e-14 74.3
MsG0580025477.01.T01 AT4G13640 60.377 53 21 0 217 269 38 90 1.17e-14 74.3
MsG0580025477.01.T01 AT5G06800 50.794 63 31 0 210 272 186 248 2.48e-14 73.2
MsG0580025477.01.T01 AT5G18240 55.357 56 25 0 217 272 46 101 4.60e-14 73.6
MsG0580025477.01.T01 AT5G18240 55.357 56 25 0 217 272 46 101 4.60e-14 73.6
MsG0580025477.01.T01 AT3G04030 53.571 56 26 0 217 272 46 101 4.72e-14 73.6
MsG0580025477.01.T01 AT5G18240 55.357 56 25 0 217 272 46 101 4.95e-14 73.6
MsG0580025477.01.T01 AT3G13040 46.154 104 50 3 173 272 196 297 5.23e-14 73.9
MsG0580025477.01.T01 AT3G13040 46.154 104 50 3 173 272 196 297 5.23e-14 73.9
MsG0580025477.01.T01 AT3G13040 46.154 104 50 3 173 272 196 297 5.23e-14 73.9
MsG0580025477.01.T01 AT5G18240 55.357 56 25 0 217 272 46 101 5.33e-14 73.6
MsG0580025477.01.T01 AT5G18240 55.357 56 25 0 217 272 46 101 5.33e-14 73.6
MsG0580025477.01.T01 AT3G04030 53.571 56 26 0 217 272 46 101 5.67e-14 73.6
MsG0580025477.01.T01 AT2G20400 63.636 55 20 0 218 272 233 287 6.84e-14 73.2
MsG0580025477.01.T01 AT2G20400 63.636 55 20 0 218 272 233 287 6.93e-14 73.2
MsG0580025477.01.T01 AT5G06800 56.364 55 24 0 218 272 194 248 9.32e-14 72.8
MsG0580025477.01.T01 AT5G06800 56.364 55 24 0 218 272 194 248 9.57e-14 72.8
MsG0580025477.01.T01 AT2G06020 55.738 61 27 0 218 278 88 148 1.61e-13 71.2
MsG0580025477.01.T01 AT1G69580 50.877 57 28 0 217 273 35 91 1.05e-12 68.9
MsG0580025477.01.T01 AT1G69580 50.877 57 28 0 217 273 35 91 1.11e-12 68.9
MsG0580025477.01.T01 AT3G04030 51.786 56 26 1 217 272 46 100 1.51e-11 65.9
MsG0580025477.01.T01 AT2G03500 53.448 58 27 0 212 269 229 286 3.56e-11 65.1

Find 95 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTATTATTTCCACTATTT+TGG 0.109662 5:-19354375 None:intergenic
TGATCTTCCTTGCTGCTTAA+TGG 0.145751 5:-19356624 None:intergenic
ATTAGTTCAAGAACTGATTT+TGG 0.179424 5:-19355115 None:intergenic
AAATCCAAATTAGGCTTCTT+TGG 0.191044 5:-19359119 None:intergenic
AAGCCCAAAGAAGCCTAATT+TGG 0.202199 5:+19359115 MsG0580025477.01.T01:CDS
ATAAGGAATGTTATGGTCTT+TGG 0.242549 5:+19356660 MsG0580025477.01.T01:CDS
AAACCAAAGGTTGATTCTAT+TGG 0.242636 5:+19357816 MsG0580025477.01.T01:CDS
AGGAAATGGATTTGGGGTTT+TGG 0.258801 5:+19354203 MsG0580025477.01.T01:CDS
AACCAACAACAACAAGTAAT+TGG 0.268823 5:+19354158 MsG0580025477.01.T01:CDS
AAAGAAGCCTAATTTGGATT+TGG 0.279313 5:+19359121 MsG0580025477.01.T01:CDS
TTCCAATTACTTGTTGTTGT+TGG 0.279422 5:-19354160 None:intergenic
GGTGGTGTTGTTGTGGTTGA+TGG 0.280213 5:-19354465 None:intergenic
GTTCATGCTGTTGAGCTCTT+AGG 0.283761 5:+19354787 MsG0580025477.01.T01:CDS
AAACAAAACACTAGTTGTTT+TGG 0.293069 5:+19354054 MsG0580025477.01.T01:five_prime_UTR
GTCTAAGAAAACCAAGTTCT+TGG 0.298952 5:-19354501 None:intergenic
CACAGAAGAGGAAATGGATT+TGG 0.299354 5:+19354195 MsG0580025477.01.T01:CDS
ACAGAAGAGGAAATGGATTT+GGG 0.314344 5:+19354196 MsG0580025477.01.T01:CDS
AAAATCAGTTCTTGAACTAA+TGG 0.321394 5:+19355117 MsG0580025477.01.T01:CDS
AATCATCTTCATATTCTTGA+TGG 0.327427 5:+19354601 MsG0580025477.01.T01:CDS
GAAGATGAAGCATACTTTCA+TGG 0.330340 5:-19354813 None:intergenic
GTGAATTCCAAATCCAAATT+AGG 0.333246 5:-19359128 None:intergenic
ACATGTCAAGTCTCACTTAC+AGG 0.334902 5:+19355162 MsG0580025477.01.T01:CDS
TTTGAATCTAAAGGCTTTGT+TGG 0.343931 5:-19354313 None:intergenic
TCTTTGGGCTTGATCCTGAT+AGG 0.348645 5:-19359103 None:intergenic
CAAGTTCTTGGCTTAAGCTT+TGG 0.365718 5:-19354489 None:intergenic
CTAATTTGCAAAGACAAATC+TGG 0.371942 5:-19354121 None:intergenic
AATCCAAATTAGGCTTCTTT+GGG 0.375208 5:-19359118 None:intergenic
CTCTCATAGCTTAGACACTT+TGG 0.377871 5:-19359053 None:intergenic
ATGGTGTTGAAAGAGTGGTT+GGG 0.383264 5:-19354446 None:intergenic
TAAACAGGAATTCCTCTAAT+AGG 0.385929 5:-19354523 None:intergenic
TGAAGTTGAGGGAATGATAA+AGG 0.400321 5:-19354559 None:intergenic
CATCATCACTTCCAAAATAG+TGG 0.402204 5:+19354364 MsG0580025477.01.T01:CDS
AACAAACACAGAAGAGGAAA+TGG 0.404086 5:+19354189 MsG0580025477.01.T01:CDS
GTCTTTGGAGCAACTCTTCT+CGG 0.404869 5:+19356675 MsG0580025477.01.T01:CDS
AGTTCATCTACAAACCTATC+AGG 0.408228 5:+19359089 MsG0580025477.01.T01:CDS
GTTCTTGGCTTAAGCTTTGG+TGG 0.418363 5:-19354486 None:intergenic
TTTCCAATAGAATCAACCTT+TGG 0.420087 5:-19357819 None:intergenic
GTATACGACAATGGATCATC+TGG 0.424138 5:+19356542 MsG0580025477.01.T01:CDS
TTTGATGAAAAGATTGATAA+GGG 0.432631 5:-19354405 None:intergenic
AATAGGGAAGCTTGGTTACA+TGG 0.432961 5:+19357792 MsG0580025477.01.T01:intron
ATCAAAGCTTGAGATTGAAA+AGG 0.435034 5:-19354676 None:intergenic
AAACTCTTTATCATCATCAA+TGG 0.438055 5:+19354246 MsG0580025477.01.T01:CDS
AATCAAGATAAGGAATGTTA+TGG 0.445329 5:+19356653 MsG0580025477.01.T01:CDS
GATGGTGTTGAAAGAGTGGT+TGG 0.452166 5:-19354447 None:intergenic
TCAAAGCTTGAGATTGAAAA+GGG 0.452273 5:-19354675 None:intergenic
AGGTGTAATTAATAATTGAT+TGG 0.458486 5:-19353863 None:intergenic
TGGTGTTGAAAGAGTGGTTG+GGG 0.461747 5:-19354445 None:intergenic
TTGTTGTTAGAAATAGTAGA+AGG 0.465912 5:-19354637 None:intergenic
AATATATTGTTTCAGAAGCT+AGG 0.466571 5:-19359178 None:intergenic
CAAAGCTTAAGCCAAGAACT+TGG 0.469777 5:+19354490 MsG0580025477.01.T01:CDS
TGAGGGAATGATAAAGGAGG+AGG 0.480787 5:-19354553 None:intergenic
GATTATGATTATGAAGTTGA+GGG 0.482816 5:-19354570 None:intergenic
CTTTGGTGGTGGTGTTGTTG+TGG 0.484341 5:-19354472 None:intergenic
GTAGTAGTCCAACGCATCCT+TGG 0.484429 5:-19354748 None:intergenic
TTGGTTGTAATAGGGAAGCT+TGG 0.485851 5:+19357784 MsG0580025477.01.T01:intron
AGACAGTTGGAAGGTTAGCT+AGG 0.490441 5:-19353904 None:intergenic
AATCTCAAAGAGGTTGGCCT+AGG 0.496863 5:-19359151 None:intergenic
AATTTATATATAGAGACAGT+TGG 0.498827 5:-19353917 None:intergenic
GATAGAGTAGGAGCTTCATC+AGG 0.511299 5:+19356382 MsG0580025477.01.T01:CDS
ATCAAGTGTTAATCAAGATA+AGG 0.511492 5:+19356643 MsG0580025477.01.T01:CDS
TGATTATGATTATGAAGTTG+AGG 0.522631 5:-19354571 None:intergenic
TTGGATTTGGAATTCACCCT+AGG 0.535688 5:+19359134 MsG0580025477.01.T01:CDS
GGTTGATGGTGTTGAAAGAG+TGG 0.538405 5:-19354451 None:intergenic
AGAGTTAGAGCAATGGAAGC+TGG 0.543410 5:+19359237 MsG0580025477.01.T01:three_prime_UTR
TTCAATCTCAAGCTTTGATG+AGG 0.545726 5:+19354680 MsG0580025477.01.T01:CDS
ATATATTGTTTCAGAAGCTA+GGG 0.546194 5:-19359177 None:intergenic
GAGGGAATGATAAAGGAGGA+GGG 0.550824 5:-19354552 None:intergenic
CTTGGCTTAAGCTTTGGTGG+TGG 0.552991 5:-19354483 None:intergenic
TGAGAGCTCCAAGGATGCGT+TGG 0.554044 5:+19354740 MsG0580025477.01.T01:CDS
CATGCTGTTGAGCTCTTAGG+TGG 0.554981 5:+19354790 MsG0580025477.01.T01:CDS
AAAGACAAATCTGGTTGTGC+TGG 0.558095 5:-19354112 None:intergenic
TGGAAACATGCAATCTCTTG+AGG 0.562071 5:+19357836 MsG0580025477.01.T01:CDS
GAGAACAACAAACACAGAAG+AGG 0.568948 5:+19354183 MsG0580025477.01.T01:CDS
GGAAGTGATGATGATGAATG+AGG 0.577883 5:-19354354 None:intergenic
TCTTGAACTAATGGATGTGA+AGG 0.578980 5:+19355126 MsG0580025477.01.T01:CDS
GTGTTGTTGTTTGAATCTAA+AGG 0.580441 5:-19354322 None:intergenic
TTGTTGGATTTGAAAGAGAG+AGG 0.584330 5:-19354297 None:intergenic
TATATATAGAGACAGTTGGA+AGG 0.586597 5:-19353913 None:intergenic
CAGAAGAGGAAATGGATTTG+GGG 0.591791 5:+19354197 MsG0580025477.01.T01:CDS
CTAGGTTAGAGACTGCAAGA+TGG 0.596830 5:-19353886 None:intergenic
GGTGTGTAGATAGCAAAAGA+TGG 0.596942 5:+19354081 MsG0580025477.01.T01:exon
ATCTCAAAGAGGTTGGCCTA+GGG 0.597654 5:-19359150 None:intergenic
TTGGTTACATGGTAAACCAA+AGG 0.600087 5:+19357803 MsG0580025477.01.T01:CDS
GGGTGAAATCTCAAAGAGGT+TGG 0.613965 5:-19359157 None:intergenic
AACTGAAAGAGTTAGAGCAA+TGG 0.615451 5:+19359230 MsG0580025477.01.T01:three_prime_UTR
AGTTGAGGGAATGATAAAGG+AGG 0.618652 5:-19354556 None:intergenic
CAATCTGATGTATACGACAA+TGG 0.619241 5:+19356533 MsG0580025477.01.T01:CDS
GTGAAAACTACAGATAGAGT+AGG 0.620063 5:+19356370 MsG0580025477.01.T01:CDS
TTAAATCCAGATGTATCGGA+CGG 0.625352 5:+19356348 MsG0580025477.01.T01:intron
GGTTAGAGACTGCAAGATGG+AGG 0.645066 5:-19353883 None:intergenic
AAAGAAGCATGAGAGCTCCA+AGG 0.647856 5:+19354731 MsG0580025477.01.T01:CDS
GATTTATCCATTAAGCAGCA+AGG 0.648761 5:+19356617 MsG0580025477.01.T01:CDS
AGCTATGAGAGAATATCAGA+TGG 0.655293 5:+19359065 MsG0580025477.01.T01:CDS
GGTGTTGAAAGAGTGGTTGG+GGG 0.661980 5:-19354444 None:intergenic
GCTAGGGTGAAATCTCAAAG+AGG 0.685178 5:-19359161 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTATCATATAGTA+TGG - Chr5:19358271-19358290 None:intergenic 10.0%
!!! ACATTTTTATTAAAAATGAT+AGG + Chr5:19356767-19356786 MsG0580025477.01.T01:intron 10.0%
!!! ATTTGATTTTGTAATTTTAA+TGG + Chr5:19358911-19358930 MsG0580025477.01.T01:intron 10.0%
!!! CTAATAATATGATTTAATTT+TGG + Chr5:19356264-19356283 MsG0580025477.01.T01:intron 10.0%
!!! CTTAAAAATATATTTCTTTT+TGG + Chr5:19354848-19354867 MsG0580025477.01.T01:intron 10.0%
!! AAAAAAATATATTCGAATTG+AGG + Chr5:19355734-19355753 MsG0580025477.01.T01:intron 15.0%
!! AAAGAATATTTATATGAATG+AGG - Chr5:19358453-19358472 None:intergenic 15.0%
!! AAGAATATTTATATGAATGA+GGG - Chr5:19358452-19358471 None:intergenic 15.0%
!! AGAAAAAAGAAAGAAAAAAA+AGG + Chr5:19358037-19358056 MsG0580025477.01.T01:intron 15.0%
!! ATATATAGTCATAGAATAAA+TGG + Chr5:19357604-19357623 MsG0580025477.01.T01:intron 15.0%
!! ATATTAATTTCAAATTCCAA+TGG + Chr5:19355391-19355410 MsG0580025477.01.T01:intron 15.0%
!! GTTAAAGAAAATTAAAACAA+GGG - Chr5:19354916-19354935 None:intergenic 15.0%
!! TACAAAAAAAAAATGGAAAA+GGG - Chr5:19358970-19358989 None:intergenic 15.0%
!! TCTATGACTATATATAATAT+AGG - Chr5:19357599-19357618 None:intergenic 15.0%
!! TGTATAAAAAAAAGGATTAT+AGG - Chr5:19356728-19356747 None:intergenic 15.0%
!! TGTTAAAGAAAATTAAAACA+AGG - Chr5:19354917-19354936 None:intergenic 15.0%
!! TTACAAAAAAAAAATGGAAA+AGG - Chr5:19358971-19358990 None:intergenic 15.0%
!! TTCTATCATATATTAATTGT+TGG + Chr5:19356421-19356440 MsG0580025477.01.T01:intron 15.0%
!! TTTATATACTTATACATTAG+AGG + Chr5:19355351-19355370 MsG0580025477.01.T01:intron 15.0%
!!! AATAACTTTTTCAAAACAAA+AGG - Chr5:19357896-19357915 None:intergenic 15.0%
!!! ATTTTTTTAAGGAAGATTTT+TGG - Chr5:19357414-19357433 None:intergenic 15.0%
!!! GAAATATATTTTTAAGAAAG+TGG - Chr5:19354844-19354863 None:intergenic 15.0%
!!! GATTTTATATTCTTTTAAGT+TGG - Chr5:19355540-19355559 None:intergenic 15.0%
!!! GTTTTATATACACAAATAAT+TGG + Chr5:19358350-19358369 MsG0580025477.01.T01:intron 15.0%
!!! TCAATTCGAATATATTTTTT+TGG - Chr5:19355735-19355754 None:intergenic 15.0%
!!! TTATATAGTCATTTTCAATA+TGG - Chr5:19358196-19358215 None:intergenic 15.0%
!! AAAAAGAAAAGCAAAACTTA+AGG - Chr5:19357728-19357747 None:intergenic 20.0%
!! AAAATACGATTCAAAAGAAA+CGG - Chr5:19358792-19358811 None:intergenic 20.0%
!! AAAGTAAAAAGCTGTTTATT+AGG - Chr5:19355503-19355522 None:intergenic 20.0%
!! AAGACAATTAGAAGAAAAAA+GGG + Chr5:19354949-19354968 MsG0580025477.01.T01:intron 20.0%
!! AATTAATAACTCTTAACTAG+AGG - Chr5:19358171-19358190 None:intergenic 20.0%
!! AATTTATATATAGAGACAGT+TGG - Chr5:19353920-19353939 None:intergenic 20.0%
!! ACAAAACAAAACAAAATGAT+AGG + Chr5:19355968-19355987 MsG0580025477.01.T01:intron 20.0%
!! AGGTGTAATTAATAATTGAT+TGG - Chr5:19353866-19353885 None:intergenic 20.0%
!! ATATTATTATTACACCATCA+TGG - Chr5:19357291-19357310 None:intergenic 20.0%
!! ATCTAATACAGAAACATTTA+TGG - Chr5:19356134-19356153 None:intergenic 20.0%
!! ATGATGAGAATATGATTAAA+GGG - Chr5:19358573-19358592 None:intergenic 20.0%
!! GTAATTAAGCTAGAATAAAA+AGG - Chr5:19354892-19354911 None:intergenic 20.0%
!! GTTTCAAGATTTCTAATTAT+GGG - Chr5:19357539-19357558 None:intergenic 20.0%
!! TATGATGAGAATATGATTAA+AGG - Chr5:19358574-19358593 None:intergenic 20.0%
!! TTAAGACAAATTAGAGTTTA+AGG - Chr5:19355192-19355211 None:intergenic 20.0%
!! TTTGATGAAAAGATTGATAA+GGG - Chr5:19354408-19354427 None:intergenic 20.0%
!!! AATTTTAAATCCAGATGTAT+CGG + Chr5:19356344-19356363 MsG0580025477.01.T01:intron 20.0%
!!! AGGTCTAATTTTTTTTTTCT+CGG - Chr5:19355829-19355848 None:intergenic 20.0%
!!! CAATCTTTAGAATAAGTAAA+AGG + Chr5:19357667-19357686 MsG0580025477.01.T01:intron 20.0%
!!! CATTATTATTTCCACTATTT+TGG - Chr5:19354378-19354397 None:intergenic 20.0%
!!! CTTTTACTTATTCTAAAGAT+TGG - Chr5:19357669-19357688 None:intergenic 20.0%
!!! GAATATATTTTTTTGGTACT+TGG - Chr5:19355728-19355747 None:intergenic 20.0%
!!! GAGATATCTCTATTTTTTTA+AGG - Chr5:19357425-19357444 None:intergenic 20.0%
!!! TACTAATTTTATTAATGGCA+TGG - Chr5:19355662-19355681 None:intergenic 20.0%
!!! TCATTTAAAACAACATCATT+AGG - Chr5:19356958-19356977 None:intergenic 20.0%
!!! TTATATTCTTTTAAGTTGGA+TGG - Chr5:19355536-19355555 None:intergenic 20.0%
!!! TTTTATAATATGCATATGCA+TGG - Chr5:19356105-19356124 None:intergenic 20.0%
!!! TTTTGATGAAAAGATTGATA+AGG - Chr5:19354409-19354428 None:intergenic 20.0%
! AAAATCAGTTCTTGAACTAA+TGG + Chr5:19355117-19355136 MsG0580025477.01.T01:CDS 25.0%
! AAACTCTTTATCATCATCAA+TGG + Chr5:19354246-19354265 MsG0580025477.01.T01:CDS 25.0%
! AAATTACTGTGAGTATGAAA+GGG - Chr5:19358535-19358554 None:intergenic 25.0%
! AACGATTTGTGATGTAAAAA+AGG + Chr5:19358143-19358162 MsG0580025477.01.T01:intron 25.0%
! AATATATTGTTTCAGAAGCT+AGG - Chr5:19359181-19359200 None:intergenic 25.0%
! AATCAAGATAAGGAATGTTA+TGG + Chr5:19356653-19356672 MsG0580025477.01.T01:CDS 25.0%
! AATCATCTTCATATTCTTGA+TGG + Chr5:19354601-19354620 MsG0580025477.01.T01:CDS 25.0%
! AATCCTATATAAATGTTGTG+TGG + Chr5:19358648-19358667 MsG0580025477.01.T01:intron 25.0%
! ACTTCTTTCTCAAATTCTTT+AGG + Chr5:19355866-19355885 MsG0580025477.01.T01:intron 25.0%
! AGTATATAGTATTAGAGAAC+AGG - Chr5:19358512-19358531 None:intergenic 25.0%
! AGTCAAAGGTTTAAACTTTA+AGG - Chr5:19355849-19355868 None:intergenic 25.0%
! ATATATTGTTTCAGAAGCTA+GGG - Chr5:19359180-19359199 None:intergenic 25.0%
! ATCAAGTGTTAATCAAGATA+AGG + Chr5:19356643-19356662 MsG0580025477.01.T01:CDS 25.0%
! ATTAAGCTAGAATAAAAAGG+AGG - Chr5:19354889-19354908 None:intergenic 25.0%
! CAAGACAATTAGAAGAAAAA+AGG + Chr5:19354948-19354967 MsG0580025477.01.T01:intron 25.0%
! GATTATGATTATGAAGTTGA+GGG - Chr5:19354573-19354592 None:intergenic 25.0%
! GGTTTCAAGATTTCTAATTA+TGG - Chr5:19357540-19357559 None:intergenic 25.0%
! TAAATTACTGTGAGTATGAA+AGG - Chr5:19358536-19358555 None:intergenic 25.0%
! TACAGAAACATTTATGGTTA+TGG - Chr5:19356128-19356147 None:intergenic 25.0%
! TAGAATAAAAAGGAGGATTA+AGG - Chr5:19354882-19354901 None:intergenic 25.0%
! TATTTATATGAATGAGGGAA+AGG - Chr5:19358447-19358466 None:intergenic 25.0%
! TCACATTTACCAATTACAAA+AGG + Chr5:19358115-19358134 MsG0580025477.01.T01:intron 25.0%
! TCATTTGACTCAATTATCAA+TGG + Chr5:19358239-19358258 MsG0580025477.01.T01:intron 25.0%
! TGATTATGATTATGAAGTTG+AGG - Chr5:19354574-19354593 None:intergenic 25.0%
! TGGTAAAGAAAGGAAAAAAA+AGG - Chr5:19356050-19356069 None:intergenic 25.0%
! TGTAATTGGTAAATGTGAAA+AGG - Chr5:19358113-19358132 None:intergenic 25.0%
!! AAACAAAACACTAGTTGTTT+TGG + Chr5:19354054-19354073 MsG0580025477.01.T01:five_prime_UTR 25.0%
!! ACAGTAGAATTCTTTTTCTA+AGG - Chr5:19353951-19353970 None:intergenic 25.0%
!! ATTGATAATTGAGTCAAATG+AGG - Chr5:19358240-19358259 None:intergenic 25.0%
!! CGTTTTTAACCTTTTGTAAT+TGG - Chr5:19358127-19358146 None:intergenic 25.0%
!! TAAAAGGCATATAAGTAAGA+TGG + Chr5:19357683-19357702 MsG0580025477.01.T01:intron 25.0%
!! TTGTTGTTAGAAATAGTAGA+AGG - Chr5:19354640-19354659 None:intergenic 25.0%
!!! AAGGGATTTTTTAGAAGAAA+AGG + Chr5:19357961-19357980 MsG0580025477.01.T01:intron 25.0%
!!! AGTTTTGCTTTTCTTTTTCA+TGG + Chr5:19357730-19357749 MsG0580025477.01.T01:intron 25.0%
!!! ATATAATATAGGAGCATTCA+TGG - Chr5:19357588-19357607 None:intergenic 25.0%
!!! ATTAGTTCAAGAACTGATTT+TGG - Chr5:19355118-19355137 None:intergenic 25.0%
!!! CTTAACCTTTGGAATATAAA+GGG - Chr5:19357873-19357892 None:intergenic 25.0%
!!! TAGAATTCTTTTTCTAAGGA+GGG - Chr5:19353947-19353966 None:intergenic 25.0%
!!! TGTTTTGTTTTTGTGGTTTT+GGG - Chr5:19354044-19354063 None:intergenic 25.0%
!!! TTAACCTTTGGAATATAAAG+GGG - Chr5:19357872-19357891 None:intergenic 25.0%
!!! TTGTTATTTGCTTTTTCAGA+AGG + Chr5:19359022-19359041 MsG0580025477.01.T01:intron 25.0%
!!! TTTTTTTCCTTTCTTTACCA+TGG + Chr5:19356050-19356069 MsG0580025477.01.T01:intron 25.0%
AAAACAAAAGGCTTAACCTT+TGG - Chr5:19357884-19357903 None:intergenic 30.0%
AAAACAACATCATTAGGCTT+TGG - Chr5:19356952-19356971 None:intergenic 30.0%
AAACATTATACCATTCATGC+AGG - Chr5:19358334-19358353 None:intergenic 30.0%
AAAGAAGCCTAATTTGGATT+TGG + Chr5:19359121-19359140 MsG0580025477.01.T01:CDS 30.0%
AAATCCAAATTAGGCTTCTT+TGG - Chr5:19359122-19359141 None:intergenic 30.0%
AACCAACAACAACAAGTAAT+TGG + Chr5:19354158-19354177 MsG0580025477.01.T01:CDS 30.0%
AACGAGATATAGTTGCAATA+TGG - Chr5:19356924-19356943 None:intergenic 30.0%
AAGAGATCATTGAGTAATGA+TGG - Chr5:19356015-19356034 None:intergenic 30.0%
AATCCAAATTAGGCTTCTTT+GGG - Chr5:19359121-19359140 None:intergenic 30.0%
AATTCAATGTGTTGTCGAAT+AGG - Chr5:19358827-19358846 None:intergenic 30.0%
AGAAATATTCTCTCTGTGTT+TGG + Chr5:19357765-19357784 MsG0580025477.01.T01:intron 30.0%
ATAAGGAATGTTATGGTCTT+TGG + Chr5:19356660-19356679 MsG0580025477.01.T01:CDS 30.0%
ATAGAGATATCTCTTTCCTT+AGG + Chr5:19357432-19357451 MsG0580025477.01.T01:intron 30.0%
ATCAAAGCTTGAGATTGAAA+AGG - Chr5:19354679-19354698 None:intergenic 30.0%
CAAATTTCAAAGCATGTGTT+TGG + Chr5:19357929-19357948 MsG0580025477.01.T01:intron 30.0%
CAAGTAACAACTTTACTTAG+AGG + Chr5:19356189-19356208 MsG0580025477.01.T01:intron 30.0%
CACTAAGTTTCTCATTTGTT+GGG - Chr5:19357495-19357514 None:intergenic 30.0%
CTAACCATTTGAATTTGTGA+AGG - Chr5:19358084-19358103 None:intergenic 30.0%
CTCTCATTACTCATAGTAAA+AGG - Chr5:19358625-19358644 None:intergenic 30.0%
GAATTTGAGAAAGAAGTCAA+AGG - Chr5:19355863-19355882 None:intergenic 30.0%
GTGAATTCCAAATCCAAATT+AGG - Chr5:19359131-19359150 None:intergenic 30.0%
TAAACAGGAATTCCTCTAAT+AGG - Chr5:19354526-19354545 None:intergenic 30.0%
TATACTCTCTCAAAATCCAA+CGG - Chr5:19356849-19356868 None:intergenic 30.0%
TATATATAGAGACAGTTGGA+AGG - Chr5:19353916-19353935 None:intergenic 30.0%
TATGATTAAAGGGCTAAAAG+AGG - Chr5:19358563-19358582 None:intergenic 30.0%
TATTGCCATGCACATTATTA+TGG + Chr5:19358005-19358024 MsG0580025477.01.T01:intron 30.0%
TCAAAGCTTGAGATTGAAAA+GGG - Chr5:19354678-19354697 None:intergenic 30.0%
TTCAAAGGGAATATTTGCTT+TGG - Chr5:19357561-19357580 None:intergenic 30.0%
TTCTAATTATGGGACTACAA+GGG - Chr5:19357529-19357548 None:intergenic 30.0%
TTCTTTAGTCAGATTGAAGA+TGG + Chr5:19355273-19355292 MsG0580025477.01.T01:intron 30.0%
TTGTCCTTCACAAATTCAAA+TGG + Chr5:19358077-19358096 MsG0580025477.01.T01:intron 30.0%
TTTCTAATTATGGGACTACA+AGG - Chr5:19357530-19357549 None:intergenic 30.0%
! ATCGATTTCTGAAAACAAGT+AGG + Chr5:19355581-19355600 MsG0580025477.01.T01:intron 30.0%
! CTAATTTGCAAAGACAAATC+TGG - Chr5:19354124-19354143 None:intergenic 30.0%
! TATTACACCATCATGGATTT+TGG - Chr5:19357284-19357303 None:intergenic 30.0%
! TTTACTTCCTTTTGAACAAC+TGG - Chr5:19357324-19357343 None:intergenic 30.0%
! TTTGAATCTAAAGGCTTTGT+TGG - Chr5:19354316-19354335 None:intergenic 30.0%
!! AGAATTCTTTTTCTAAGGAG+GGG - Chr5:19353946-19353965 None:intergenic 30.0%
!! GCTTAACCTTTGGAATATAA+AGG - Chr5:19357874-19357893 None:intergenic 30.0%
!! GTAGAATTCTTTTTCTAAGG+AGG - Chr5:19353948-19353967 None:intergenic 30.0%
!! GTGTTGTTGTTTGAATCTAA+AGG - Chr5:19354325-19354344 None:intergenic 30.0%
!! GTGTTTGAATGTTTGCTATA+GGG + Chr5:19355086-19355105 MsG0580025477.01.T01:intron 30.0%
!! TAACCTTTGGAATATAAAGG+GGG - Chr5:19357871-19357890 None:intergenic 30.0%
!! TGTTTGAATGTTTGCTATAG+GGG + Chr5:19355087-19355106 MsG0580025477.01.T01:intron 30.0%
!! TTCCAATTACTTGTTGTTGT+TGG - Chr5:19354163-19354182 None:intergenic 30.0%
!!! CAACTAGTGTTTTGTTTTTG+TGG - Chr5:19354051-19354070 None:intergenic 30.0%
!!! GTGTTTTGTTTTTGTGGTTT+TGG - Chr5:19354045-19354064 None:intergenic 30.0%
!!! GTTGTTGTTGGTTTTGTATT+TGG - Chr5:19354151-19354170 None:intergenic 30.0%
!!! TTTGCTTTTTCAGAAGGAAA+TGG + Chr5:19359028-19359047 MsG0580025477.01.T01:intron 30.0%
AAACATTAGGCTCTTGTATG+GGG + Chr5:19357469-19357488 MsG0580025477.01.T01:intron 35.0%
AAATGAGGCAGGTTTAATAG+GGG - Chr5:19358225-19358244 None:intergenic 35.0%
AACAAACACAGAAGAGGAAA+TGG + Chr5:19354189-19354208 MsG0580025477.01.T01:CDS 35.0%
AACTGAAAGAGTTAGAGCAA+TGG + Chr5:19359230-19359249 MsG0580025477.01.T01:three_prime_UTR 35.0%
AAGATGGTACGATTCTGATT+GGG + Chr5:19355289-19355308 MsG0580025477.01.T01:intron 35.0%
AGCATTCATGGAAGTTTCAA+AGG - Chr5:19357576-19357595 None:intergenic 35.0%
AGCTATGAGAGAATATCAGA+TGG + Chr5:19359065-19359084 MsG0580025477.01.T01:CDS 35.0%
AGTTCATCTACAAACCTATC+AGG + Chr5:19359089-19359108 MsG0580025477.01.T01:CDS 35.0%
ATAATTGAGTCAAATGAGGC+AGG - Chr5:19358236-19358255 None:intergenic 35.0%
ATTCCCCCTTTATATTCCAA+AGG + Chr5:19357865-19357884 MsG0580025477.01.T01:intron 35.0%
ATTGAGAGAAACCCTTTCTA+AGG - Chr5:19355420-19355439 None:intergenic 35.0%
ATTTATACTCACCTGACAAG+TGG + Chr5:19357004-19357023 MsG0580025477.01.T01:intron 35.0%
CAAACATTAGGCTCTTGTAT+GGG + Chr5:19357468-19357487 MsG0580025477.01.T01:intron 35.0%
CAAATGAGGCAGGTTTAATA+GGG - Chr5:19358226-19358245 None:intergenic 35.0%
CAATCTGATGTATACGACAA+TGG + Chr5:19356533-19356552 MsG0580025477.01.T01:CDS 35.0%
CATCATCACTTCCAAAATAG+TGG + Chr5:19354364-19354383 MsG0580025477.01.T01:CDS 35.0%
CATCTCCATAATAATGTGCA+TGG - Chr5:19358013-19358032 None:intergenic 35.0%
CTCCCTTAAACCATGAAATA+GGG + Chr5:19356510-19356529 MsG0580025477.01.T01:intron 35.0%
CTCTGTGTTTGGTTGTAATA+GGG + Chr5:19357776-19357795 MsG0580025477.01.T01:intron 35.0%
GAAGATGAAGCATACTTTCA+TGG - Chr5:19354816-19354835 None:intergenic 35.0%
GATTTATCCATTAAGCAGCA+AGG + Chr5:19356617-19356636 MsG0580025477.01.T01:CDS 35.0%
GCACTAAGTTTCTCATTTGT+TGG - Chr5:19357496-19357515 None:intergenic 35.0%
GCATTCATGGAAGTTTCAAA+GGG - Chr5:19357575-19357594 None:intergenic 35.0%
GCTCCACACAACATTTATAT+AGG - Chr5:19358654-19358673 None:intergenic 35.0%
GTCTAAGAAAACCAAGTTCT+TGG - Chr5:19354504-19354523 None:intergenic 35.0%
GTGAAAACTACAGATAGAGT+AGG + Chr5:19356370-19356389 MsG0580025477.01.T01:CDS 35.0%
TAGTATTAGAGAACAGGTAG+AGG - Chr5:19358506-19358525 None:intergenic 35.0%
TCAAACATTAGGCTCTTGTA+TGG + Chr5:19357467-19357486 MsG0580025477.01.T01:intron 35.0%
TCAAATGAGGCAGGTTTAAT+AGG - Chr5:19358227-19358246 None:intergenic 35.0%
TCCAATGGTTTCCTTAGAAA+GGG + Chr5:19355406-19355425 MsG0580025477.01.T01:intron 35.0%
TCTCCCTTAAACCATGAAAT+AGG + Chr5:19356509-19356528 MsG0580025477.01.T01:intron 35.0%
TCTCTGTGTTTGGTTGTAAT+AGG + Chr5:19357775-19357794 MsG0580025477.01.T01:intron 35.0%
TCTGAAAACAAGTAGGACAA+AGG + Chr5:19355588-19355607 MsG0580025477.01.T01:intron 35.0%
TGAAGTTGAGGGAATGATAA+AGG - Chr5:19354562-19354581 None:intergenic 35.0%
TGCCCTATTTCATGGTTTAA+GGG - Chr5:19356515-19356534 None:intergenic 35.0%
TTAAATCCAGATGTATCGGA+CGG + Chr5:19356348-19356367 MsG0580025477.01.T01:intron 35.0%
TTCCAATGGTTTCCTTAGAA+AGG + Chr5:19355405-19355424 MsG0580025477.01.T01:intron 35.0%
TTGCCCTATTTCATGGTTTA+AGG - Chr5:19356516-19356535 None:intergenic 35.0%
TTGGTTACATGGTAAACCAA+AGG + Chr5:19357803-19357822 MsG0580025477.01.T01:CDS 35.0%
TTGTTGGATTTGAAAGAGAG+AGG - Chr5:19354300-19354319 None:intergenic 35.0%
TTTATACTCACCTGACAAGT+GGG + Chr5:19357005-19357024 MsG0580025477.01.T01:intron 35.0%
! ACAGAAGAGGAAATGGATTT+GGG + Chr5:19354196-19354215 MsG0580025477.01.T01:CDS 35.0%
! AGGGAAAGGAAATTTGAGAT+GGG - Chr5:19358433-19358452 None:intergenic 35.0%
! ATGTGTTTGGAATGCATGAA+AGG + Chr5:19357942-19357961 MsG0580025477.01.T01:intron 35.0%
! CTACTACTTCTTTGAAGAGT+AGG - Chr5:19357377-19357396 None:intergenic 35.0%
! CTCTTTCCTTAGGATTTTGT+GGG + Chr5:19357442-19357461 MsG0580025477.01.T01:intron 35.0%
! GGTTTTCTTAGACCTATTAG+AGG + Chr5:19354511-19354530 MsG0580025477.01.T01:CDS 35.0%
! TCTCTTTCCTTAGGATTTTG+TGG + Chr5:19357441-19357460 MsG0580025477.01.T01:intron 35.0%
! TCTTGAACTAATGGATGTGA+AGG + Chr5:19355126-19355145 MsG0580025477.01.T01:CDS 35.0%
! TCTTTCCTTAGGATTTTGTG+GGG + Chr5:19357443-19357462 MsG0580025477.01.T01:intron 35.0%
! TGTGTTTGGAATGCATGAAA+GGG + Chr5:19357943-19357962 MsG0580025477.01.T01:intron 35.0%
! TTCAATCTCAAGCTTTGATG+AGG + Chr5:19354680-19354699 MsG0580025477.01.T01:CDS 35.0%
! TTTTGTGGGGTTCAAACATT+AGG + Chr5:19357456-19357475 MsG0580025477.01.T01:intron 35.0%
!! GGTGTTTGAATGTTTGCTAT+AGG + Chr5:19355085-19355104 MsG0580025477.01.T01:intron 35.0%
!!! AACACTAGTTGTTTTGGTGA+AGG + Chr5:19354060-19354079 MsG0580025477.01.T01:five_prime_UTR 35.0%
!!! GTTGTTGGTTTTGTATTTGG+AGG - Chr5:19354148-19354167 None:intergenic 35.0%
!!! GTTTTTGTGGTTTTGGGTTT+TGG - Chr5:19354038-19354057 None:intergenic 35.0%
!!! TGGTTTTGGGTTTTGGATTT+TGG - Chr5:19354031-19354050 None:intergenic 35.0%
AAAGACAAATCTGGTTGTGC+TGG - Chr5:19354115-19354134 None:intergenic 40.0%
AAAGCTGCCATGGTAAAGAA+AGG - Chr5:19356060-19356079 None:intergenic 40.0%
AACTATGAGGTAGTCTGTCT+TGG - Chr5:19355635-19355654 None:intergenic 40.0%
AAGCCCAAAGAAGCCTAATT+TGG + Chr5:19359115-19359134 MsG0580025477.01.T01:CDS 40.0%
AATAGGGAAGCTTGGTTACA+TGG + Chr5:19357792-19357811 MsG0580025477.01.T01:intron 40.0%
AATGAGGCAGGTTTAATAGG+GGG - Chr5:19358224-19358243 None:intergenic 40.0%
ACATGTCAAGTCTCACTTAC+AGG + Chr5:19355162-19355181 MsG0580025477.01.T01:CDS 40.0%
AGAACAGGTAGAGGAATCAA+AGG - Chr5:19358497-19358516 None:intergenic 40.0%
AGTTGAGGGAATGATAAAGG+AGG - Chr5:19354559-19354578 None:intergenic 40.0%
ATAAATGTTGTGTGGAGCAG+TGG + Chr5:19358656-19358675 MsG0580025477.01.T01:intron 40.0%
CAAAAGAATTCCCACTTGTC+AGG - Chr5:19357018-19357037 None:intergenic 40.0%
CAAAGCTTAAGCCAAGAACT+TGG + Chr5:19354490-19354509 MsG0580025477.01.T01:CDS 40.0%
CAAGTTCTTGGCTTAAGCTT+TGG - Chr5:19354492-19354511 None:intergenic 40.0%
CATCAGATTGCCCTATTTCA+TGG - Chr5:19356523-19356542 None:intergenic 40.0%
CATGCAAGTTCTATAGCACT+TGG + Chr5:19358390-19358409 MsG0580025477.01.T01:intron 40.0%
CTCAACTTCACATGCAAACA+TGG + Chr5:19357178-19357197 MsG0580025477.01.T01:intron 40.0%
CTCTCATAGCTTAGACACTT+TGG - Chr5:19359056-19359075 None:intergenic 40.0%
CTCTCTTCCAGTTGTTCAAA+AGG + Chr5:19357314-19357333 MsG0580025477.01.T01:intron 40.0%
CTTCACATGCAAACATGGTT+AGG + Chr5:19357183-19357202 MsG0580025477.01.T01:intron 40.0%
GAACGATGCAGTGGTTATAT+AGG + Chr5:19358745-19358764 MsG0580025477.01.T01:intron 40.0%
GAAGATGGTACGATTCTGAT+TGG + Chr5:19355288-19355307 MsG0580025477.01.T01:intron 40.0%
GAGAACAACAAACACAGAAG+AGG + Chr5:19354183-19354202 MsG0580025477.01.T01:CDS 40.0%
GAGGGAAAGGAAATTTGAGA+TGG - Chr5:19358434-19358453 None:intergenic 40.0%
GGTGTGTAGATAGCAAAAGA+TGG + Chr5:19354081-19354100 MsG0580025477.01.T01:exon 40.0%
GTATACGACAATGGATCATC+TGG + Chr5:19356542-19356561 MsG0580025477.01.T01:CDS 40.0%
TACTGTACAGCTGTATTTGC+AGG + Chr5:19356821-19356840 MsG0580025477.01.T01:intron 40.0%
TCTAGCGCAAATGGCTAATA+TGG + Chr5:19355757-19355776 MsG0580025477.01.T01:intron 40.0%
TGAGCATCCAAAATCCATGA+TGG + Chr5:19357274-19357293 MsG0580025477.01.T01:intron 40.0%
TGGAAACATGCAATCTCTTG+AGG + Chr5:19357836-19357855 MsG0580025477.01.T01:CDS 40.0%
TTGAACCCCACAAAATCCTA+AGG - Chr5:19357451-19357470 None:intergenic 40.0%
TTGGTTGTAATAGGGAAGCT+TGG + Chr5:19357784-19357803 MsG0580025477.01.T01:intron 40.0%
! ACCCTTTCTAAGGAAACCAT+TGG - Chr5:19355410-19355429 None:intergenic 40.0%
! ATGGTGTTGAAAGAGTGGTT+GGG - Chr5:19354449-19354468 None:intergenic 40.0%
! ATTAGGTTGCAGAAGAAGCA+GGG - Chr5:19355486-19355505 None:intergenic 40.0%
! CACAGAAGAGGAAATGGATT+TGG + Chr5:19354195-19354214 MsG0580025477.01.T01:CDS 40.0%
! CAGAAGAGGAAATGGATTTG+GGG + Chr5:19354197-19354216 MsG0580025477.01.T01:CDS 40.0%
! CTCTCATGCTTCTTTTTGCT+GGG - Chr5:19354726-19354745 None:intergenic 40.0%
! CTTTAACCATGGTTAGTCAC+AGG + Chr5:19356076-19356095 MsG0580025477.01.T01:intron 40.0%
! GGAAGTGATGATGATGAATG+AGG - Chr5:19354357-19354376 None:intergenic 40.0%
! GGGAAAGGAAATTTGAGATG+GGG - Chr5:19358432-19358451 None:intergenic 40.0%
! TATTAGGTTGCAGAAGAAGC+AGG - Chr5:19355487-19355506 None:intergenic 40.0%
! TCATGGATTTTGGATGCTCA+TGG - Chr5:19357274-19357293 None:intergenic 40.0%
! TGATCTTCCTTGCTGCTTAA+TGG - Chr5:19356627-19356646 None:intergenic 40.0%
! TTGGATTTGGAATTCACCCT+AGG + Chr5:19359134-19359153 MsG0580025477.01.T01:CDS 40.0%
! TTTTGGATGCTCATGGTTTG+TGG - Chr5:19357267-19357286 None:intergenic 40.0%
!! AGGAAATGGATTTGGGGTTT+TGG + Chr5:19354203-19354222 MsG0580025477.01.T01:CDS 40.0%
!! GTGTGTTTTTGTGTGTGTGA+TGG - Chr5:19353830-19353849 None:intergenic 40.0%
AACCATGGTTAAAGCTGCCA+TGG - Chr5:19356070-19356089 None:intergenic 45.0%
AATACACACGCCTGCATGAA+TGG + Chr5:19358321-19358340 MsG0580025477.01.T01:intron 45.0%
AGAGTTAGAGCAATGGAAGC+TGG + Chr5:19359237-19359256 MsG0580025477.01.T01:three_prime_UTR 45.0%
ATAACCACTGCATCGTTCAG+TGG - Chr5:19358743-19358762 None:intergenic 45.0%
ATGGCATGGACAGAACTATG+AGG - Chr5:19355648-19355667 None:intergenic 45.0%
CAAGTTCTATAGCACTTGGC+AGG + Chr5:19358394-19358413 MsG0580025477.01.T01:intron 45.0%
CTAGGTTAGAGACTGCAAGA+TGG - Chr5:19353889-19353908 None:intergenic 45.0%
GAATTGAGGTCTAGCGCAAA+TGG + Chr5:19355748-19355767 MsG0580025477.01.T01:intron 45.0%
GAGGGAATGATAAAGGAGGA+GGG - Chr5:19354555-19354574 None:intergenic 45.0%
GATAGAGTAGGAGCTTCATC+AGG + Chr5:19356382-19356401 MsG0580025477.01.T01:CDS 45.0%
GCTAGGGTGAAATCTCAAAG+AGG - Chr5:19359164-19359183 None:intergenic 45.0%
GGGTGAAATCTCAAAGAGGT+TGG - Chr5:19359160-19359179 None:intergenic 45.0%
GTTCATGCTGTTGAGCTCTT+AGG + Chr5:19354787-19354806 MsG0580025477.01.T01:CDS 45.0%
TCAGTGGCTCGTAGAATCAT+TGG - Chr5:19358727-19358746 None:intergenic 45.0%
TCTTTGGGCTTGATCCTGAT+AGG - Chr5:19359106-19359125 None:intergenic 45.0%
TGAGGGAATGATAAAGGAGG+AGG - Chr5:19354556-19354575 None:intergenic 45.0%
TGAGTGAGTGATCAAGAGAG+AGG - Chr5:19357162-19357181 None:intergenic 45.0%
! AAAGAAGCATGAGAGCTCCA+AGG + Chr5:19354731-19354750 MsG0580025477.01.T01:CDS 45.0%
! AGACAGTTGGAAGGTTAGCT+AGG - Chr5:19353907-19353926 None:intergenic 45.0%
! ATAGCACTTGGCAGGCTTTT+AGG + Chr5:19358402-19358421 MsG0580025477.01.T01:intron 45.0%
! GATGGTGTTGAAAGAGTGGT+TGG - Chr5:19354450-19354469 None:intergenic 45.0%
! GCTCTCATGCTTCTTTTTGC+TGG - Chr5:19354727-19354746 None:intergenic 45.0%
! GTTCTTGGCTTAAGCTTTGG+TGG - Chr5:19354489-19354508 None:intergenic 45.0%
! TACCATGGCAGCTTTAACCA+TGG + Chr5:19356065-19356084 MsG0580025477.01.T01:intron 45.0%
! TGGTGTTGAAAGAGTGGTTG+GGG - Chr5:19354448-19354467 None:intergenic 45.0%
! TTTTCACCGTCCGATACATC+TGG - Chr5:19356357-19356376 None:intergenic 45.0%
!! AATCTCAAAGAGGTTGGCCT+AGG - Chr5:19359154-19359173 None:intergenic 45.0%
!! ATCTCAAAGAGGTTGGCCTA+GGG - Chr5:19359153-19359172 None:intergenic 45.0%
!! GGAGGAGGGTTTTGATAAAC+AGG - Chr5:19354541-19354560 None:intergenic 45.0%
!! GGTTGATGGTGTTGAAAGAG+TGG - Chr5:19354454-19354473 None:intergenic 45.0%
!! GTCTTTGGAGCAACTCTTCT+CGG + Chr5:19356675-19356694 MsG0580025477.01.T01:CDS 45.0%
!!! GGGGTTTTGGAAAAGAGCTT+TGG + Chr5:19354216-19354235 MsG0580025477.01.T01:CDS 45.0%
!! AAAAAAATTGTATAAAAAAA+AGG - Chr5:19356736-19356755 None:intergenic 5.0%
!! AAATAAATAAGTAAATAAAA+AGG - Chr5:19354999-19355018 None:intergenic 5.0%
!!! AATTATTATTATTTTTTCTA+TGG + Chr5:19355064-19355083 MsG0580025477.01.T01:intron 5.0%
!!! ATTATTACTAATTTTATTAA+TGG - Chr5:19355667-19355686 None:intergenic 5.0%
!!! ATTTTATTACAAAAAAAAAA+TGG - Chr5:19358977-19358996 None:intergenic 5.0%
CATGCTGTTGAGCTCTTAGG+TGG + Chr5:19354790-19354809 MsG0580025477.01.T01:CDS 50.0%
GAGGTAGTCTGTCTTGGCTT+GGG - Chr5:19355629-19355648 None:intergenic 50.0%
GCTGTATTTGCAGGAACCGT+TGG + Chr5:19356830-19356849 MsG0580025477.01.T01:intron 50.0%
GGACTACAAGGGCTTAGCTT+TGG - Chr5:19357518-19357537 None:intergenic 50.0%
GGTTAGAGACTGCAAGATGG+AGG - Chr5:19353886-19353905 None:intergenic 50.0%
GTAGTAGTCCAACGCATCCT+TGG - Chr5:19354751-19354770 None:intergenic 50.0%
GTGTTGCAGTTGCAAGTTGC+AGG - Chr5:19356902-19356921 None:intergenic 50.0%
GTTGCAAGTTGCAGGAACGT+TGG - Chr5:19356894-19356913 None:intergenic 50.0%
TGAGGTAGTCTGTCTTGGCT+TGG - Chr5:19355630-19355649 None:intergenic 50.0%
TGGAAGCCTGTGACTAACCA+TGG - Chr5:19356085-19356104 None:intergenic 50.0%
! CTTGGCTTAAGCTTTGGTGG+TGG - Chr5:19354486-19354505 None:intergenic 50.0%
! GGTGTTGAAAGAGTGGTTGG+GGG - Chr5:19354447-19354466 None:intergenic 50.0%
!! CTTTGGTGGTGGTGTTGTTG+TGG - Chr5:19354475-19354494 None:intergenic 50.0%
!! GGTGGTGTTGTTGTGGTTGA+TGG - Chr5:19354468-19354487 None:intergenic 50.0%
GTTGCAGAAGAAGCAGGGAG+AGG - Chr5:19355481-19355500 None:intergenic 55.0%
TGAGAGCTCCAAGGATGCGT+TGG + Chr5:19354740-19354759 MsG0580025477.01.T01:CDS 55.0%
CGAGCCACTGAACGATGCAG+TGG + Chr5:19358736-19358755 MsG0580025477.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 19353827 19359283 19353827 ID=MsG0580025477.01;Name=MsG0580025477.01
Chr5 mRNA 19353827 19359283 19353827 ID=MsG0580025477.01.T01;Parent=MsG0580025477.01;Name=MsG0580025477.01.T01;_AED=0.37;_eAED=0.37;_QI=273|1|1|1|1|1|6|114|399
Chr5 exon 19353827 19354820 19353827 ID=MsG0580025477.01.T01:exon:22824;Parent=MsG0580025477.01.T01
Chr5 exon 19355107 19355183 19355107 ID=MsG0580025477.01.T01:exon:22825;Parent=MsG0580025477.01.T01
Chr5 exon 19356358 19356403 19356358 ID=MsG0580025477.01.T01:exon:22826;Parent=MsG0580025477.01.T01
Chr5 exon 19356531 19356696 19356531 ID=MsG0580025477.01.T01:exon:22827;Parent=MsG0580025477.01.T01
Chr5 exon 19357797 19357857 19357797 ID=MsG0580025477.01.T01:exon:22828;Parent=MsG0580025477.01.T01
Chr5 exon 19359041 19359283 19359041 ID=MsG0580025477.01.T01:exon:22829;Parent=MsG0580025477.01.T01
Chr5 five_prime_UTR 19353827 19354099 19353827 ID=MsG0580025477.01.T01:five_prime_utr;Parent=MsG0580025477.01.T01
Chr5 CDS 19354100 19354820 19354100 ID=MsG0580025477.01.T01:cds;Parent=MsG0580025477.01.T01
Chr5 CDS 19355107 19355183 19355107 ID=MsG0580025477.01.T01:cds;Parent=MsG0580025477.01.T01
Chr5 CDS 19356358 19356403 19356358 ID=MsG0580025477.01.T01:cds;Parent=MsG0580025477.01.T01
Chr5 CDS 19356531 19356696 19356531 ID=MsG0580025477.01.T01:cds;Parent=MsG0580025477.01.T01
Chr5 CDS 19357797 19357857 19357797 ID=MsG0580025477.01.T01:cds;Parent=MsG0580025477.01.T01
Chr5 CDS 19359041 19359169 19359041 ID=MsG0580025477.01.T01:cds;Parent=MsG0580025477.01.T01
Chr5 three_prime_UTR 19359170 19359283 19359170 ID=MsG0580025477.01.T01:three_prime_utr;Parent=MsG0580025477.01.T01
Gene Sequence

>MsG0580025477.01.T01

ATGGAGCTATTTCCAGCACAACCAGATTTGTCTTTGCAAATTAGTCCTCCAAATACAAAACCAACAACAACAAGTAATTGGAAGAGAACAACAAACACAGAAGAGGAAATGGATTTGGGGTTTTGGAAAAGAGCTTTGGATTCAAGAAACTCTTTATCATCATCAATGGCTTCTAAAACTGATAATTACTCTTTTGACCTCTCTCTTTCAAATCCAACAAAGCCTTTAGATTCAAACAACAACACTTCAAATAACCTCATTCATCATCATCACTTCCAAAATAGTGGAAATAATAATGCAAACAACCCTTATCAATCTTTTCATCAAAATCATTACTTTCAACACCCCCAACCACTCTTTCAACACCATCAACCACAACAACACCACCACCAAAGCTTAAGCCAAGAACTTGGTTTTCTTAGACCTATTAGAGGAATTCCTGTTTATCAAAACCCTCCTCCTTTATCATTCCCTCAACTTCATAATCATAATCATAATCTAAATCATCTTCATATTCTTGATGGTACTACTACTACACCTTCTACTATTTCTAACAACAACAACACAAGTTCAAGCCCTTTTCAATCTCAAGCTTTGATGAGGTCAAGATTCTTGTCAAGATTCCCAGCAAAAAGAAGCATGAGAGCTCCAAGGATGCGTTGGACTACTACACTTCATGCTCGATTTGTTCATGCTGTTGAGCTCTTAGGTGGCCATGAAAGGGCTACTCCAAAATCAGTTCTTGAACTAATGGATGTGAAGGATCTTACATTAGCACATGTCAAGTCTCACTTACAGATGTATCGGACGGTGAAAACTACAGATAGAGTAGGAGCTTCATCAGGGCAATCTGATGTATACGACAATGGATCATCTGGAGATAATTCTGATGACATAATGTTTGACATCAACTCTTCAAGAAGATCATCTGATTTATCCATTAAGCAGCAAGGAAGATCAAGTGTTAATCAAGATAAGGAATGTTATGGTCTTTGGAGCAACTCTTCTCGGGAAGCTTGGTTACATGGTAAACCAAAGGTTGATTCTATTGGAAACATGCAATCTCTTGAGAAGGAAATGGATCCAAAGTGTCTAAGCTATGAGAGAATATCAGATGGCAGTTCATCTACAAACCTATCAGGATCAAGCCCAAAGAAGCCTAATTTGGATTTGGAATTCACCCTAGGCCAACCTCTTTGA
Protein sequence

>MsG0580025477.01.T01

MELFPAQPDLSLQISPPNTKPTTTSNWKRTTNTEEEMDLGFWKRALDSRNSLSSSMASKTDNYSFDLSLSNPTKPLDSNNNTSNNLIHHHHFQNSGNNNANNPYQSFHQNHYFQHPQPLFQHHQPQQHHHQSLSQELGFLRPIRGIPVYQNPPPLSFPQLHNHNHNLNHLHILDGTTTTPSTISNNNNTSSSPFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRVGASSGQSDVYDNGSSGDNSDDIMFDINSSRRSSDLSIKQQGRSSVNQDKECYGLWSNSSREAWLHGKPKVDSIGNMQSLEKEMDPKCLSYERISDGSSSTNLSGSSPKKPNLDLEFTLGQPL*